No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G27020 AT5G54870 AT5G54870 |
| fragaria_vesca | FvH4_3g22420 FvH4_3g22420 FvH4_3g22420 FvH4_3g22420 |
| malus_domestica | MD03G1205200.v1.1 MD11G1221100.v1.1 |
| prunus_persica | Prupe.4G210700_v2.0.a1 Prupe.4G210700_v2.0.a1 Prupe.4G210700_v2.0.a1 Prupe.4G210800_v2.0.a1 |
| pyrus_communis | pycom03g15510 pycom11g19510 |
| rosa_chinensis | RchiOBHm_Chr5g0039091 |
| rosa_laevigata | RLG00000033892 |
| rosa_multiflora | Rmu_sc0000533.1_g000029 Rmu_ssc0000410.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00042030 |
| rosa_rugosa | Rorug05G0176400 |
| rosa_samantha | Rh5AG262800 Rh5BG267600 Rh5CG300300 Rh5DG274100 |
| rosa_wichuraiana | Rw5G024570 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 99 |
| Acc36I | ACCTGC | 1 cut(s) | 1316 |
| Acc65I | GGTACC | 1 cut(s) | 497 |
| AccB1I | GGYRCC | 2 cut(s) | 497, 1524 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 208 |
| AccI | GTMKAC | 2 cut(s) | 159, 1245 |
| AccII | CGCG | 3 cut(s) | 93, 155, 224 |
| AciI | CCGC | 9 cut(s) | 33, 42, 60, 91, 155, 285, 288, 688, 1399 |
| AclWI | GGATC | 2 cut(s) | 1204, 1310 |
| AcoI | YGGCCR | 2 cut(s) | 128, 1553 |
| AcsI | RAATTY | 4 cut(s) | 278, 556, 857, 1346 |
| AcuI | CTGAAG | 1 cut(s) | 789 |
| AcvI | CACGTG | 1 cut(s) | 372 |
| AcyI | GRCGYC | 2 cut(s) | 96, 188 |
| AdeI | CACNNNGTG | 3 cut(s) | 208, 246, 1060 |
| AfaI | GTAC | 3 cut(s) | 499, 1505, 1547 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 208, 394, 567, 1325, 1557 |
| AflIII | ACRYGT | 2 cut(s) | 329, 1113 |
| AgsI | TTSAA | 8 cut(s) | 443, 506, 1132, 1181, 1187, 1289, 1385, 1395 |
| AjnI | CCWGG | 3 cut(s) | 947, 1056, 1335 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1312, 1344 |
| AleI | CACNNNNGTG | 1 cut(s) | 588 |
| AluBI | AGCT | 5 cut(s) | 731, 778, 865, 1008, 1438 |
| AluI | AGCT | 5 cut(s) | 731, 778, 865, 1008, 1438 |
| Alw26I | GTCTC | 3 cut(s) | 698, 932, 1132 |
| AlwI | GGATC | 2 cut(s) | 1204, 1310 |
| Ama87I | CYCGRG | 2 cut(s) | 393, 575 |
| AoxI | GGCC | 4 cut(s) | 128, 973, 1275, 1553 |
| ApeKI | GCWGC | 6 cut(s) | 29, 273, 835, 944, 1106, 1534 |
| ApoI | RAATTY | 4 cut(s) | 278, 556, 857, 1346 |
| Asp718I | GGTACC | 1 cut(s) | 497 |
| AspLEI | GCGC | 2 cut(s) | 155, 224 |
| AsuC2I | CCSGG | 1 cut(s) | 1552 |
| AsuHPI | GGTGA | 4 cut(s) | 77, 563, 733, 1046 |
| AvaI | CYCGRG | 2 cut(s) | 393, 575 |
| BaeGI | GKGCMC | 1 cut(s) | 1529 |
| BalI | TGGCCA | 1 cut(s) | 130 |
| BanI | GGYRCC | 2 cut(s) | 497, 1524 |
| BbrPI | CACGTG | 1 cut(s) | 372 |
| BbsI | GAAGAC | 2 cut(s) | 514, 1032 |
| BbvI | GCAGC | 6 cut(s) | 41, 285, 822, 931, 1093, 1521 |
| BccI | CCATC | 5 cut(s) | 244, 540, 1247, 1415, 1537 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 262, 296 |
| BciT130I | CCWGG | 3 cut(s) | 949, 1058, 1337 |
| BclI | TGATCA | 2 cut(s) | 601, 1207 |
| BcnI | CCSGG | 1 cut(s) | 1552 |
| BcoDI | GTCTC | 3 cut(s) | 698, 932, 1132 |
| BfaI | CTAG | 3 cut(s) | 665, 710, 1175 |
| BfmI | CTRYAG | 1 cut(s) | 1020 |
| BfuAI | ACCTGC | 1 cut(s) | 1316 |
| BisI | GCNGC | 9 cut(s) | 30, 33, 274, 286, 836, 945, 1107, 1399, 1535 |
| BlsI | GCNGC | 9 cut(s) | 31, 34, 275, 287, 837, 946, 1108, 1400, 1536 |
| BmcAI | AGTACT | 1 cut(s) | 1547 |
| Bme1390I | CCNGG | 4 cut(s) | 949, 1058, 1337, 1552 |
| BmeT110I | CYCGRG | 2 cut(s) | 393, 575 |
| BmiI | GGNNCC | 3 cut(s) | 499, 1500, 1526 |
| BmrFI | CCNGG | 4 cut(s) | 949, 1058, 1337, 1552 |
| BmsI | GCATC | 3 cut(s) | 919, 1039, 1351 |
| BpiI | GAAGAC | 2 cut(s) | 514, 1032 |
| BpmI | CTGGAG | 1 cut(s) | 675 |
| BpuEI | CTTGAG | 2 cut(s) | 287, 428 |
| BpuMI | CCSGG | 1 cut(s) | 1552 |
| BsaAI | YACGTR | 1 cut(s) | 372 |
| BsaBI | GATNNNNATC | 1 cut(s) | 882 |
| BsaHI | GRCGYC | 2 cut(s) | 96, 188 |
| BsaJI | CCNNGG | 4 cut(s) | 617, 839, 948, 1556 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 208, 394, 567, 1325, 1557 |
| Bse1I | ACTGG | 2 cut(s) | 274, 547 |
| Bse3DI | GCAATG | 2 cut(s) | 896, 1423 |
| Bse8I | GATNNNNATC | 1 cut(s) | 882 |
| BseBI | CCWGG | 3 cut(s) | 949, 1058, 1337 |
| BseDI | CCNNGG | 4 cut(s) | 617, 839, 948, 1556 |
| BseGI | GGATG | 8 cut(s) | 255, 495, 523, 551, 850, 910, 1054, 1240 |
| BseJI | GATNNNNATC | 1 cut(s) | 882 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 208, 394, 567, 1325, 1557 |
| BseMI | GCAATG | 2 cut(s) | 896, 1423 |
| BseMII | CTCAG | 2 cut(s) | 81, 1171 |
| BseNI | ACTGG | 2 cut(s) | 274, 547 |
| BseSI | GKGCMC | 1 cut(s) | 1529 |
| BseXI | GCAGC | 6 cut(s) | 41, 285, 822, 931, 1093, 1521 |
| BsgI | GTGCAG | 1 cut(s) | 131 |
| Bsh1236I | CGCG | 3 cut(s) | 93, 155, 224 |
| Bsh1285I | CGRYCG | 1 cut(s) | 159 |
| BshFI | GGCC | 4 cut(s) | 130, 975, 1277, 1555 |
| BshNI | GGYRCC | 2 cut(s) | 497, 1524 |
| BsiEI | CGRYCG | 1 cut(s) | 159 |
| BsiHKCI | CYCGRG | 2 cut(s) | 393, 575 |
| BsiSI | CCGG | 1 cut(s) | 1552 |
| BslFI | GGGAC | 2 cut(s) | 178, 1439 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 208, 394, 567, 1325, 1557 |
| BsmAI | GTCTC | 3 cut(s) | 698, 932, 1132 |
| BsmFI | GGGAC | 2 cut(s) | 178, 1439 |
| BsnI | GGCC | 4 cut(s) | 130, 975, 1277, 1555 |
| BsoBI | CYCGRG | 2 cut(s) | 393, 575 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1529 |
| Bsp143I | GATC | 4 cut(s) | 601, 1196, 1207, 1315 |
| Bsp19I | CCATGG | 1 cut(s) | 839 |
| BspACI | CCGC | 9 cut(s) | 33, 42, 60, 91, 155, 285, 288, 688, 1399 |
| BspANI | GGCC | 4 cut(s) | 130, 975, 1277, 1555 |
| BspCNI | CTCAG | 2 cut(s) | 80, 1170 |
| BspFNI | CGCG | 3 cut(s) | 93, 155, 224 |
| BspLI | GGNNCC | 3 cut(s) | 499, 1500, 1526 |
| BspMI | ACCTGC | 1 cut(s) | 1316 |
| BspPI | GGATC | 2 cut(s) | 1204, 1310 |
| BspT107I | GGYRCC | 2 cut(s) | 497, 1524 |
| BsrDI | GCAATG | 2 cut(s) | 896, 1423 |
| BsrI | ACTGG | 2 cut(s) | 274, 547 |
| BssECI | CCNNGG | 4 cut(s) | 617, 839, 948, 1556 |
| BssMI | GATC | 4 cut(s) | 601, 1196, 1207, 1315 |
| BssNAI | GTATAC | 1 cut(s) | 1246 |
| BssNI | GRCGYC | 2 cut(s) | 96, 188 |
| BssT1I | CCWWGG | 2 cut(s) | 617, 839 |
| Bst1107I | GTATAC | 1 cut(s) | 1246 |
| Bst2UI | CCWGG | 3 cut(s) | 949, 1058, 1337 |
| Bst4CI | ACNGT | 7 cut(s) | 323, 367, 1078, 1250, 1311, 1432, 1503 |
| Bst6I | CTCTTC | 2 cut(s) | 29, 300 |
| BstACI | GRCGYC | 2 cut(s) | 96, 188 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1106 |
| BstBAI | YACGTR | 1 cut(s) | 372 |
| BstC8I | GCNNGC | 5 cut(s) | 226, 483, 977, 1098, 1403 |
| BstDEI | CTNAG | 2 cut(s) | 67, 1157 |
| BstDSI | CCRYGG | 2 cut(s) | 839, 1556 |
| BstF5I | GGATG | 8 cut(s) | 255, 495, 523, 551, 850, 910, 1054, 1240 |
| BstFNI | CGCG | 3 cut(s) | 93, 155, 224 |
| BstHHI | GCGC | 2 cut(s) | 155, 224 |
| BstKTI | GATC | 4 cut(s) | 604, 1199, 1210, 1318 |
| BstMAI | GTCTC | 3 cut(s) | 698, 932, 1132 |
| BstMBI | GATC | 4 cut(s) | 601, 1196, 1207, 1315 |
| BstMCI | CGRYCG | 1 cut(s) | 159 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 41, 282, 907, 972, 1106 |
| BstNI | CCWGG | 3 cut(s) | 949, 1058, 1337 |
| BstNSI | RCATGY | 3 cut(s) | 333, 1117, 1372 |
| BstSCI | CCNGG | 4 cut(s) | 947, 1056, 1335, 1550 |
| BstSFI | CTRYAG | 1 cut(s) | 1020 |
| BstSLI | GKGCMC | 1 cut(s) | 1529 |
| BstUI | CGCG | 3 cut(s) | 93, 155, 224 |
| BstV1I | GCAGC | 6 cut(s) | 41, 285, 822, 931, 1093, 1521 |
| BstV2I | GAAGAC | 2 cut(s) | 514, 1032 |
| BstX2I | RGATCY | 1 cut(s) | 1196 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 983 |
| BstYI | RGATCY | 1 cut(s) | 1196 |
| BstZ17I | GTATAC | 1 cut(s) | 1246 |
| BsuRI | GGCC | 4 cut(s) | 130, 975, 1277, 1555 |
| BtgI | CCRYGG | 2 cut(s) | 839, 1556 |
| BtgZI | GCGATG | 1 cut(s) | 1515 |
| BtsCI | GGATG | 8 cut(s) | 255, 495, 523, 551, 850, 910, 1054, 1240 |
| BtsIMutI | CAGTG | 3 cut(s) | 1255, 1341, 1428 |
| BveI | ACCTGC | 1 cut(s) | 1316 |
| Cac8I | GCNNGC | 5 cut(s) | 226, 483, 977, 1098, 1403 |
| CfoI | GCGC | 2 cut(s) | 155, 224 |
| CseI | GACGC | 2 cut(s) | 177, 596 |
| CsiI | ACCWGGT | 1 cut(s) | 1056 |
| Csp6I | GTAC | 3 cut(s) | 498, 1504, 1546 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 664, 699, 1026, 1061 |
| CviAII | CATG | 8 cut(s) | 126, 330, 586, 840, 967, 997, 1114, 1369 |
| CviQI | GTAC | 3 cut(s) | 498, 1504, 1546 |
| DdeI | CTNAG | 2 cut(s) | 67, 1157 |
| DpnI | GATC | 4 cut(s) | 603, 1198, 1209, 1317 |
| DpnII | GATC | 4 cut(s) | 601, 1196, 1207, 1315 |
| DraI | TTTAAA | 2 cut(s) | 415, 759 |
| DraIII | CACNNNGTG | 3 cut(s) | 208, 246, 1060 |
| EaeI | YGGCCR | 2 cut(s) | 128, 1553 |
| Eam1104I | CTCTTC | 2 cut(s) | 29, 300 |
| EarI | CTCTTC | 2 cut(s) | 29, 300 |
| EciI | GGCGGA | 1 cut(s) | 303 |
| Eco130I | CCWWGG | 2 cut(s) | 617, 839 |
| Eco57I | CTGAAG | 1 cut(s) | 789 |
| Eco72I | CACGTG | 1 cut(s) | 372 |
| Eco88I | CYCGRG | 2 cut(s) | 393, 575 |
| EcoRI | GAATTC | 2 cut(s) | 278, 556 |
| EcoRII | CCWGG | 3 cut(s) | 947, 1056, 1335 |
| EcoT14I | CCWWGG | 2 cut(s) | 617, 839 |
| ErhI | CCWWGG | 2 cut(s) | 617, 839 |
| FaeI | CATG | 8 cut(s) | 129, 333, 589, 843, 970, 1000, 1117, 1372 |
| FaqI | GGGAC | 2 cut(s) | 178, 1439 |
| FatI | CATG | 8 cut(s) | 125, 329, 585, 839, 966, 996, 1113, 1368 |
| FauI | CCCGC | 1 cut(s) | 98 |
| FauNDI | CATATG | 2 cut(s) | 1102, 1512 |
| FbaI | TGATCA | 2 cut(s) | 601, 1207 |
| FblI | GTMKAC | 2 cut(s) | 159, 1245 |
| Fnu4HI | GCNGC | 9 cut(s) | 30, 33, 274, 286, 836, 945, 1107, 1399, 1535 |
| FokI | GGATG | 8 cut(s) | 262, 502, 530, 558, 857, 897, 1061, 1247 |
| Fsp4HI | GCNGC | 9 cut(s) | 30, 33, 274, 286, 836, 945, 1107, 1399, 1535 |
| FspBI | CTAG | 3 cut(s) | 665, 710, 1175 |
| GlaI | GCGC | 2 cut(s) | 154, 223 |
| GluI | GCNGC | 9 cut(s) | 30, 33, 274, 286, 836, 945, 1107, 1399, 1535 |
| GsuI | CTGGAG | 1 cut(s) | 675 |
| HaeIII | GGCC | 4 cut(s) | 130, 975, 1277, 1555 |
| HapII | CCGG | 1 cut(s) | 1552 |
| HgaI | GACGC | 2 cut(s) | 177, 596 |
| HhaI | GCGC | 2 cut(s) | 155, 224 |
| Hin1I | GRCGYC | 2 cut(s) | 96, 188 |
| Hin1II | CATG | 8 cut(s) | 129, 333, 589, 843, 970, 1000, 1117, 1372 |
| Hin6I | GCGC | 2 cut(s) | 153, 222 |
| HinP1I | GCGC | 2 cut(s) | 153, 222 |
| HincII | GTYRAC | 2 cut(s) | 160, 1263 |
| HindII | GTYRAC | 2 cut(s) | 160, 1263 |
| HindIII | AAGCTT | 1 cut(s) | 1436 |
| HinfI | GANTC | 6 cut(s) | 679, 706, 764, 791, 878, 1084 |
| HpaII | CCGG | 1 cut(s) | 1552 |
| HphI | GGTGA | 4 cut(s) | 77, 563, 733, 1046 |
| Hpy166II | GTNNAC | 4 cut(s) | 160, 534, 1246, 1263 |
| Hpy188I | TCNGA | 2 cut(s) | 769, 1168 |
| Hpy188III | TCNNGA | 9 cut(s) | 395, 575, 577, 654, 710, 795, 914, 1226, 1286 |
| Hpy8I | GTNNAC | 4 cut(s) | 160, 534, 1246, 1263 |
| Hpy99I | CGWCG | 3 cut(s) | 98, 182, 193 |
| HpyAV | CCTTC | 4 cut(s) | 764, 805, 965, 1288 |
| HpyCH4III | ACNGT | 7 cut(s) | 323, 367, 1078, 1250, 1311, 1432, 1503 |
| HpyCH4IV | ACGT | 2 cut(s) | 96, 371 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 41, 282, 907, 972, 1106 |
| HpyF3I | CTNAG | 2 cut(s) | 67, 1157 |
| HpySE526I | ACGT | 2 cut(s) | 96, 371 |
| Hsp92I | GRCGYC | 2 cut(s) | 96, 188 |
| Hsp92II | CATG | 8 cut(s) | 129, 333, 589, 843, 970, 1000, 1117, 1372 |
| HspAI | GCGC | 2 cut(s) | 153, 222 |
| KpnI | GGTACC | 1 cut(s) | 501 |
| Ksp22I | TGATCA | 2 cut(s) | 601, 1207 |
| Kzo9I | GATC | 4 cut(s) | 601, 1196, 1207, 1315 |
| LmnI | GCTCC | 3 cut(s) | 397, 728, 963 |
| Lsp1109I | GCAGC | 6 cut(s) | 41, 285, 822, 931, 1093, 1521 |
| LweI | GCATC | 3 cut(s) | 919, 1039, 1351 |
| MabI | ACCWGGT | 1 cut(s) | 1056 |
| MaeI | CTAG | 3 cut(s) | 665, 710, 1175 |
| MaeII | ACGT | 2 cut(s) | 96, 371 |
| MaeIII | GTNAC | 3 cut(s) | 367, 622, 1339 |
| MalI | GATC | 4 cut(s) | 603, 1198, 1209, 1317 |
| MboI | GATC | 4 cut(s) | 601, 1196, 1207, 1315 |
| MboII | GAAGA | 6 cut(s) | 16, 287, 514, 830, 1037, 1191 |
| MfeI | CAATTG | 1 cut(s) | 1320 |
| MflI | RGATCY | 1 cut(s) | 1196 |
| MhlI | GDGCHC | 1 cut(s) | 1529 |
| MlsI | TGGCCA | 1 cut(s) | 130 |
| MluNI | TGGCCA | 1 cut(s) | 130 |
| MlyI | GAGTC | 1 cut(s) | 700 |
| MmeI | TCCRAC | 2 cut(s) | 305, 766 |
| Mox20I | TGGCCA | 1 cut(s) | 130 |
| MscI | TGGCCA | 1 cut(s) | 130 |
| MseI | TTAA | 4 cut(s) | 414, 758, 933, 1455 |
| MslI | CAYNNNNRTG | 2 cut(s) | 588, 804 |
| Msp20I | TGGCCA | 1 cut(s) | 130 |
| MspA1I | CMGCKG | 1 cut(s) | 1008 |
| MspI | CCGG | 1 cut(s) | 1552 |
| MspR9I | CCNGG | 4 cut(s) | 949, 1058, 1337, 1552 |
| MunI | CAATTG | 1 cut(s) | 1320 |
| MvaI | CCWGG | 3 cut(s) | 949, 1058, 1337 |
| MvnI | CGCG | 3 cut(s) | 93, 155, 224 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 41, 282, 907, 972, 1106 |
| NciI | CCSGG | 1 cut(s) | 1552 |
| NcoI | CCATGG | 1 cut(s) | 839 |
| NdeI | CATATG | 2 cut(s) | 1102, 1512 |
| NdeII | GATC | 4 cut(s) | 601, 1196, 1207, 1315 |
| NlaIII | CATG | 8 cut(s) | 129, 333, 589, 843, 970, 1000, 1117, 1372 |
| NlaIV | GGNNCC | 3 cut(s) | 499, 1500, 1526 |
| NmeAIII | GCCGAG | 1 cut(s) | 164 |
| NmuCI | GTSAC | 2 cut(s) | 367, 1339 |
| NspI | RCATGY | 3 cut(s) | 333, 1117, 1372 |
| OliI | CACNNNNGTG | 1 cut(s) | 588 |
| PaeR7I | CTCGAG | 1 cut(s) | 575 |
| PciI | ACATGT | 2 cut(s) | 329, 1113 |
| PfeI | GAWTC | 5 cut(s) | 679, 764, 791, 878, 1084 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 208 |
| PkrI | GCNGC | 9 cut(s) | 31, 34, 275, 287, 837, 946, 1108, 1400, 1536 |
| PleI | GAGTC | 1 cut(s) | 700 |
| PmaCI | CACGTG | 1 cut(s) | 372 |
| PmlI | CACGTG | 1 cut(s) | 372 |
| PpsI | GAGTC | 1 cut(s) | 700 |
| Ppu21I | YACGTR | 1 cut(s) | 372 |
| PscI | ACATGT | 2 cut(s) | 329, 1113 |
| Psp6I | CCWGG | 3 cut(s) | 947, 1056, 1335 |
| PspCI | CACGTG | 1 cut(s) | 372 |
| PspGI | CCWGG | 3 cut(s) | 947, 1056, 1335 |
| PspN4I | GGNNCC | 3 cut(s) | 499, 1500, 1526 |
| PsuI | RGATCY | 1 cut(s) | 1196 |
| PvuII | CAGCTG | 1 cut(s) | 1008 |
| RsaI | GTAC | 3 cut(s) | 499, 1505, 1547 |
| RsaNI | GTAC | 3 cut(s) | 498, 1504, 1546 |
| RseI | CAYNNNNRTG | 2 cut(s) | 588, 804 |
| SalI | GTCGAC | 1 cut(s) | 158 |
| SaqAI | TTAA | 4 cut(s) | 414, 758, 933, 1455 |
| SatI | GCNGC | 9 cut(s) | 30, 33, 274, 286, 836, 945, 1107, 1399, 1535 |
| Sau3AI | GATC | 4 cut(s) | 601, 1196, 1207, 1315 |
| ScaI | AGTACT | 1 cut(s) | 1547 |
| SchI | GAGTC | 1 cut(s) | 700 |
| ScrFI | CCNGG | 4 cut(s) | 949, 1058, 1337, 1552 |
| SduI | GDGCHC | 1 cut(s) | 1529 |
| SexAI | ACCWGGT | 1 cut(s) | 1056 |
| SfaNI | GCATC | 3 cut(s) | 919, 1039, 1351 |
| SfcI | CTRYAG | 1 cut(s) | 1020 |
| Sfr274I | CTCGAG | 1 cut(s) | 575 |
| SlaI | CTCGAG | 1 cut(s) | 575 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 588, 804 |
| SmlI | CTYRAG | 3 cut(s) | 302, 407, 575 |
| SmoI | CTYRAG | 3 cut(s) | 302, 407, 575 |
| SsiI | CCGC | 9 cut(s) | 33, 42, 60, 91, 155, 285, 288, 688, 1399 |
| SspI | AATATT | 2 cut(s) | 565, 631 |
| SspMI | CTAG | 3 cut(s) | 665, 710, 1175 |
| StyD4I | CCNGG | 4 cut(s) | 947, 1056, 1335, 1550 |
| StyI | CCWWGG | 2 cut(s) | 617, 839 |
| TaaI | ACNGT | 7 cut(s) | 323, 367, 1078, 1250, 1311, 1432, 1503 |
| TaiI | ACGT | 2 cut(s) | 99, 374 |
| TaqI | TCGA | 4 cut(s) | 159, 576, 1087, 1468 |
| TatI | WGTACW | 1 cut(s) | 1545 |
| TauI | GCSGC | 3 cut(s) | 35, 288, 1401 |
| TfiI | GAWTC | 5 cut(s) | 679, 764, 791, 878, 1084 |
| Tru1I | TTAA | 4 cut(s) | 414, 758, 933, 1455 |
| Tru9I | TTAA | 4 cut(s) | 414, 758, 933, 1455 |
| TscAI | CASTG | 3 cut(s) | 1255, 1348, 1435 |
| TseFI | GTSAC | 2 cut(s) | 367, 1339 |
| TseI | GCWGC | 6 cut(s) | 29, 273, 835, 944, 1106, 1534 |
| Tsp45I | GTSAC | 2 cut(s) | 367, 1339 |
| TspDTI | ATGAA | 5 cut(s) | 114, 287, 1137, 1270, 1529 |
| TspRI | CASTG | 3 cut(s) | 1255, 1348, 1435 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 208 |
| XapI | RAATTY | 4 cut(s) | 278, 556, 857, 1346 |
| XbaI | TCTAGA | 1 cut(s) | 709 |
| XceI | RCATGY | 3 cut(s) | 333, 1117, 1372 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 205, 266, 846 |
| XhoI | CTCGAG | 1 cut(s) | 575 |
| XmiI | GTMKAC | 2 cut(s) | 159, 1245 |
| XspI | CTAG | 3 cut(s) | 665, 710, 1175 |
| ZraI | GACGTC | 1 cut(s) | 97 |
| ZrmI | AGTACT | 1 cut(s) | 1547 |