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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G27020 AT5G54870 AT5G54870 |
| fragaria_vesca | FvH4_3g22420 FvH4_3g22420 FvH4_3g22420 FvH4_3g22420 |
| malus_domestica | MD03G1205200.v1.1 MD11G1221100.v1.1 |
| prunus_persica | Prupe.4G210700_v2.0.a1 Prupe.4G210700_v2.0.a1 Prupe.4G210700_v2.0.a1 Prupe.4G210800_v2.0.a1 |
| pyrus_communis | pycom03g15510 pycom11g19510 |
| rosa_chinensis | RchiOBHm_Chr5g0039091 |
| rosa_laevigata | RLG00000033892 |
| rosa_multiflora | Rmu_sc0000533.1_g000029 Rmu_ssc0000410.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00042030 |
| rosa_rugosa | Rorug05G0176400 |
| rosa_samantha | Rh5AG262800 Rh5BG267600 Rh5CG300300 Rh5DG274100 |
| rosa_wichuraiana | Rw5G024570 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 99 |
| AccB1I | GGYRCC | 1 cut(s) | 497 |
| AccIII | TCCGGA | 1 cut(s) | 1225 |
| AciI | CCGC | 5 cut(s) | 29, 33, 155, 288, 1399 |
| AclWI | GGATC | 2 cut(s) | 1204, 1310 |
| AcoI | YGGCCR | 2 cut(s) | 30, 128 |
| AcsI | RAATTY | 3 cut(s) | 278, 1346, 1376 |
| AcuI | CTGAAG | 1 cut(s) | 789 |
| AcyI | GRCGYC | 1 cut(s) | 96 |
| AfaI | GTAC | 1 cut(s) | 1547 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 394, 567, 1557 |
| AflIII | ACRYGT | 2 cut(s) | 329, 1113 |
| AgsI | TTSAA | 8 cut(s) | 443, 506, 704, 1132, 1181, 1187, 1289, 1385 |
| AjnI | CCWGG | 2 cut(s) | 947, 1550 |
| AleI | CACNNNNGTG | 2 cut(s) | 176, 588 |
| AluBI | AGCT | 7 cut(s) | 188, 245, 731, 865, 1008, 1329, 1438 |
| AluI | AGCT | 7 cut(s) | 188, 245, 731, 865, 1008, 1329, 1438 |
| Alw26I | GTCTC | 2 cut(s) | 932, 1132 |
| AlwI | GGATC | 2 cut(s) | 1204, 1310 |
| Ama87I | CYCGRG | 1 cut(s) | 90 |
| Aor13HI | TCCGGA | 1 cut(s) | 1225 |
| AoxI | GGCC | 4 cut(s) | 30, 128, 973, 1275 |
| ApeKI | GCWGC | 4 cut(s) | 273, 835, 944, 1106 |
| ApoI | RAATTY | 3 cut(s) | 278, 1346, 1376 |
| AsuC2I | CCSGG | 2 cut(s) | 91, 92 |
| AsuHPI | GGTGA | 4 cut(s) | 34, 77, 563, 800 |
| AsuNHI | GCTAGC | 1 cut(s) | 1325 |
| AvaI | CYCGRG | 1 cut(s) | 90 |
| BalI | TGGCCA | 1 cut(s) | 130 |
| BanI | GGYRCC | 1 cut(s) | 497 |
| BanII | GRGCYC | 1 cut(s) | 185 |
| BbsI | GAAGAC | 1 cut(s) | 1154 |
| BbvI | GCAGC | 4 cut(s) | 285, 822, 931, 1093 |
| BccI | CCATC | 2 cut(s) | 244, 1247 |
| BceAI | ACGGC | 1 cut(s) | 20 |
| BciT130I | CCWGG | 2 cut(s) | 949, 1552 |
| BclI | TGATCA | 1 cut(s) | 601 |
| BcnI | CCSGG | 2 cut(s) | 91, 92 |
| BcoDI | GTCTC | 2 cut(s) | 932, 1132 |
| BfaI | CTAG | 5 cut(s) | 494, 665, 710, 1175, 1326 |
| BisI | GCNGC | 7 cut(s) | 30, 33, 274, 836, 945, 1107, 1399 |
| BlpI | GCTNAGC | 1 cut(s) | 184 |
| BlsI | GCNGC | 7 cut(s) | 31, 34, 275, 837, 946, 1108, 1400 |
| BmcAI | AGTACT | 1 cut(s) | 1547 |
| Bme1390I | CCNGG | 4 cut(s) | 91, 92, 949, 1552 |
| BmeT110I | CYCGRG | 1 cut(s) | 90 |
| BmiI | GGNNCC | 2 cut(s) | 499, 1500 |
| BmrFI | CCNGG | 4 cut(s) | 91, 92, 949, 1552 |
| BmsI | GCATC | 4 cut(s) | 480, 919, 1039, 1351 |
| BmtI | GCTAGC | 1 cut(s) | 1329 |
| BpiI | GAAGAC | 1 cut(s) | 1154 |
| BpmI | CTGGAG | 2 cut(s) | 675, 1534 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 184 |
| BpuEI | CTTGAG | 2 cut(s) | 428, 560 |
| BpuMI | CCSGG | 2 cut(s) | 91, 92 |
| BsaBI | GATNNNNATC | 1 cut(s) | 882 |
| BsaHI | GRCGYC | 1 cut(s) | 96 |
| BsaJI | CCNNGG | 5 cut(s) | 89, 90, 617, 839, 948 |
| BsaWI | WCCGGW | 1 cut(s) | 1225 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 394, 567, 1557 |
| Bse1I | ACTGG | 1 cut(s) | 976 |
| Bse3DI | GCAATG | 1 cut(s) | 1423 |
| Bse8I | GATNNNNATC | 1 cut(s) | 882 |
| BseAI | TCCGGA | 1 cut(s) | 1225 |
| BseBI | CCWGG | 2 cut(s) | 949, 1552 |
| BseDI | CCNNGG | 5 cut(s) | 89, 90, 617, 839, 948 |
| BseGI | GGATG | 6 cut(s) | 255, 495, 523, 850, 910, 1054 |
| BseJI | GATNNNNATC | 1 cut(s) | 882 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 394, 567, 1557 |
| BseMI | GCAATG | 1 cut(s) | 1423 |
| BseMII | CTCAG | 1 cut(s) | 198 |
| BseNI | ACTGG | 1 cut(s) | 976 |
| BseX3I | CGGCCG | 1 cut(s) | 30 |
| BseXI | GCAGC | 4 cut(s) | 285, 822, 931, 1093 |
| BsgI | GTGCAG | 1 cut(s) | 131 |
| Bsh1285I | CGRYCG | 2 cut(s) | 33, 159 |
| BshFI | GGCC | 4 cut(s) | 32, 130, 975, 1277 |
| BshNI | GGYRCC | 1 cut(s) | 497 |
| BsiEI | CGRYCG | 2 cut(s) | 33, 159 |
| BsiHKCI | CYCGRG | 1 cut(s) | 90 |
| BsiSI | CCGG | 2 cut(s) | 91, 1226 |
| BslFI | GGGAC | 3 cut(s) | 107, 178, 1439 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 394, 567, 1557 |
| BsmAI | GTCTC | 2 cut(s) | 932, 1132 |
| BsmFI | GGGAC | 3 cut(s) | 107, 178, 1439 |
| BsnI | GGCC | 4 cut(s) | 32, 130, 975, 1277 |
| BsoBI | CYCGRG | 1 cut(s) | 90 |
| Bsp1286I | GDGCHC | 1 cut(s) | 185 |
| Bsp13I | TCCGGA | 1 cut(s) | 1225 |
| Bsp143I | GATC | 4 cut(s) | 160, 601, 1196, 1315 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 184 |
| Bsp19I | CCATGG | 1 cut(s) | 839 |
| BspACI | CCGC | 5 cut(s) | 29, 33, 155, 288, 1399 |
| BspANI | GGCC | 4 cut(s) | 32, 130, 975, 1277 |
| BspCNI | CTCAG | 1 cut(s) | 197 |
| BspEI | TCCGGA | 1 cut(s) | 1225 |
| BspLI | GGNNCC | 2 cut(s) | 499, 1500 |
| BspOI | GCTAGC | 1 cut(s) | 1329 |
| BspPI | GGATC | 2 cut(s) | 1204, 1310 |
| BspQI | GCTCTTC | 1 cut(s) | 62 |
| BspT107I | GGYRCC | 1 cut(s) | 497 |
| BsrDI | GCAATG | 1 cut(s) | 1423 |
| BsrI | ACTGG | 1 cut(s) | 976 |
| BssECI | CCNNGG | 5 cut(s) | 89, 90, 617, 839, 948 |
| BssMI | GATC | 4 cut(s) | 160, 601, 1196, 1315 |
| BssNI | GRCGYC | 1 cut(s) | 96 |
| BssT1I | CCWWGG | 2 cut(s) | 617, 839 |
| Bst2UI | CCWGG | 2 cut(s) | 949, 1552 |
| Bst4CI | ACNGT | 6 cut(s) | 152, 206, 1078, 1250, 1311, 1432 |
| Bst6I | CTCTTC | 2 cut(s) | 62, 300 |
| BstACI | GRCGYC | 1 cut(s) | 96 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1106 |
| BstC8I | GCNNGC | 5 cut(s) | 226, 483, 1098, 1327, 1403 |
| BstDEI | CTNAG | 3 cut(s) | 184, 675, 1157 |
| BstDSI | CCRYGG | 1 cut(s) | 839 |
| BstF5I | GGATG | 6 cut(s) | 255, 495, 523, 850, 910, 1054 |
| BstKTI | GATC | 4 cut(s) | 163, 604, 1199, 1318 |
| BstMAI | GTCTC | 2 cut(s) | 932, 1132 |
| BstMBI | GATC | 4 cut(s) | 160, 601, 1196, 1315 |
| BstMCI | CGRYCG | 2 cut(s) | 33, 159 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 907, 972, 1106 |
| BstNI | CCWGG | 2 cut(s) | 949, 1552 |
| BstNSI | RCATGY | 3 cut(s) | 333, 1117, 1372 |
| BstSCI | CCNGG | 4 cut(s) | 89, 90, 947, 1550 |
| BstV1I | GCAGC | 4 cut(s) | 285, 822, 931, 1093 |
| BstV2I | GAAGAC | 1 cut(s) | 1154 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 178, 983 |
| BstZI | CGGCCG | 1 cut(s) | 30 |
| BsuRI | GGCC | 4 cut(s) | 32, 130, 975, 1277 |
| BtgI | CCRYGG | 1 cut(s) | 839 |
| BtsCI | GGATG | 6 cut(s) | 255, 495, 523, 850, 910, 1054 |
| BtsI | GCAGTG | 1 cut(s) | 1532 |
| BtsIMutI | CAGTG | 5 cut(s) | 157, 730, 1255, 1341, 1532 |
| Cac8I | GCNNGC | 5 cut(s) | 226, 483, 1098, 1327, 1403 |
| CciNI | GCGGCCGC | 1 cut(s) | 30 |
| Cfr9I | CCCGGG | 1 cut(s) | 90 |
| Csp6I | GTAC | 1 cut(s) | 1546 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 250, 285, 494, 529 |
| CviQI | GTAC | 1 cut(s) | 1546 |
| DdeI | CTNAG | 3 cut(s) | 184, 675, 1157 |
| DpnI | GATC | 4 cut(s) | 162, 603, 1198, 1317 |
| DpnII | GATC | 4 cut(s) | 160, 601, 1196, 1315 |
| DraI | TTTAAA | 2 cut(s) | 415, 759 |
| EaeI | YGGCCR | 2 cut(s) | 30, 128 |
| EagI | CGGCCG | 1 cut(s) | 30 |
| Eam1104I | CTCTTC | 2 cut(s) | 62, 300 |
| EarI | CTCTTC | 2 cut(s) | 62, 300 |
| EciI | GGCGGA | 1 cut(s) | 303 |
| EclXI | CGGCCG | 1 cut(s) | 30 |
| Eco130I | CCWWGG | 2 cut(s) | 617, 839 |
| Eco24I | GRGCYC | 1 cut(s) | 185 |
| Eco52I | CGGCCG | 1 cut(s) | 30 |
| Eco57I | CTGAAG | 1 cut(s) | 789 |
| Eco88I | CYCGRG | 1 cut(s) | 90 |
| EcoRII | CCWGG | 2 cut(s) | 947, 1550 |
| EcoT14I | CCWWGG | 2 cut(s) | 617, 839 |
| EcoT38I | GRGCYC | 1 cut(s) | 185 |
| ErhI | CCWWGG | 2 cut(s) | 617, 839 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 762, 794 |
| FaqI | GGGAC | 3 cut(s) | 107, 178, 1439 |
| FauNDI | CATATG | 2 cut(s) | 1102, 1512 |
| FbaI | TGATCA | 1 cut(s) | 601 |
| Fnu4HI | GCNGC | 7 cut(s) | 30, 33, 274, 836, 945, 1107, 1399 |
| FokI | GGATG | 6 cut(s) | 262, 502, 530, 857, 897, 1061 |
| FriOI | GRGCYC | 1 cut(s) | 185 |
| Fsp4HI | GCNGC | 7 cut(s) | 30, 33, 274, 836, 945, 1107, 1399 |
| FspBI | CTAG | 5 cut(s) | 494, 665, 710, 1175, 1326 |
| GluI | GCNGC | 7 cut(s) | 30, 33, 274, 836, 945, 1107, 1399 |
| GsuI | CTGGAG | 2 cut(s) | 675, 1534 |
| HaeIII | GGCC | 4 cut(s) | 32, 130, 975, 1277 |
| HapII | CCGG | 2 cut(s) | 91, 1226 |
| Hin1I | GRCGYC | 1 cut(s) | 96 |
| HincII | GTYRAC | 1 cut(s) | 1263 |
| HindII | GTYRAC | 1 cut(s) | 1263 |
| HindIII | AAGCTT | 1 cut(s) | 1436 |
| HinfI | GANTC | 7 cut(s) | 355, 679, 764, 791, 878, 1171, 1529 |
| HpaII | CCGG | 2 cut(s) | 91, 1226 |
| HphI | GGTGA | 4 cut(s) | 34, 77, 563, 800 |
| Hpy166II | GTNNAC | 2 cut(s) | 534, 1263 |
| Hpy188I | TCNGA | 2 cut(s) | 769, 1452 |
| Hpy188III | TCNNGA | 7 cut(s) | 577, 654, 795, 914, 1166, 1226, 1286 |
| Hpy8I | GTNNAC | 2 cut(s) | 534, 1263 |
| HpyAV | CCTTC | 4 cut(s) | 764, 805, 965, 1288 |
| HpyCH4III | ACNGT | 6 cut(s) | 152, 206, 1078, 1250, 1311, 1432 |
| HpyCH4IV | ACGT | 4 cut(s) | 96, 607, 636, 996 |
| HpyCH4V | TGCA | 6 cut(s) | 148, 481, 910, 959, 1100, 1416 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 907, 972, 1106 |
| HpyF3I | CTNAG | 3 cut(s) | 184, 675, 1157 |
| HpySE526I | ACGT | 4 cut(s) | 96, 607, 636, 996 |
| Hsp92I | GRCGYC | 1 cut(s) | 96 |
| Kpn2I | TCCGGA | 1 cut(s) | 1225 |
| Ksp22I | TGATCA | 1 cut(s) | 601 |
| Kzo9I | GATC | 4 cut(s) | 160, 601, 1196, 1315 |
| LguI | GCTCTTC | 1 cut(s) | 62 |
| LmnI | GCTCC | 3 cut(s) | 397, 728, 963 |
| Lsp1109I | GCAGC | 4 cut(s) | 285, 822, 931, 1093 |
| LweI | GCATC | 4 cut(s) | 480, 919, 1039, 1351 |
| MaeI | CTAG | 5 cut(s) | 494, 665, 710, 1175, 1326 |
| MaeII | ACGT | 4 cut(s) | 96, 607, 636, 996 |
| MaeIII | GTNAC | 4 cut(s) | 367, 622, 1339, 1554 |
| MalI | GATC | 4 cut(s) | 162, 603, 1198, 1317 |
| MboI | GATC | 4 cut(s) | 160, 601, 1196, 1315 |
| MboII | GAAGA | 3 cut(s) | 49, 287, 1154 |
| MfeI | CAATTG | 1 cut(s) | 1320 |
| MhlI | GDGCHC | 1 cut(s) | 185 |
| MlsI | TGGCCA | 1 cut(s) | 130 |
| MluCI | AATT | 8 cut(s) | 74, 278, 825, 1320, 1346, 1376, 1390, 1561 |
| MluNI | TGGCCA | 1 cut(s) | 130 |
| MlyI | GAGTC | 1 cut(s) | 349 |
| MmeI | TCCRAC | 1 cut(s) | 305 |
| MnlI | CCTC | 9 cut(s) | 19, 25, 56, 110, 114, 146, 485, 621, 1187 |
| Mox20I | TGGCCA | 1 cut(s) | 130 |
| MroI | TCCGGA | 1 cut(s) | 1225 |
| MscI | TGGCCA | 1 cut(s) | 130 |
| MseI | TTAA | 5 cut(s) | 309, 414, 633, 758, 1455 |
| MslI | CAYNNNNRTG | 3 cut(s) | 176, 588, 1515 |
| Msp20I | TGGCCA | 1 cut(s) | 130 |
| MspA1I | CMGCKG | 1 cut(s) | 1008 |
| MspI | CCGG | 2 cut(s) | 91, 1226 |
| MspR9I | CCNGG | 4 cut(s) | 91, 92, 949, 1552 |
| MunI | CAATTG | 1 cut(s) | 1320 |
| MvaI | CCWGG | 2 cut(s) | 949, 1552 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 907, 972, 1106 |
| NciI | CCSGG | 2 cut(s) | 91, 92 |
| NcoI | CCATGG | 1 cut(s) | 839 |
| NdeI | CATATG | 2 cut(s) | 1102, 1512 |
| NdeII | GATC | 4 cut(s) | 160, 601, 1196, 1315 |
| NheI | GCTAGC | 1 cut(s) | 1325 |
| NlaIV | GGNNCC | 2 cut(s) | 499, 1500 |
| NmeAIII | GCCGAG | 1 cut(s) | 460 |
| NmuCI | GTSAC | 4 cut(s) | 367, 622, 1339, 1554 |
| NotI | GCGGCCGC | 1 cut(s) | 30 |
| NspI | RCATGY | 3 cut(s) | 333, 1117, 1372 |
| OliI | CACNNNNGTG | 2 cut(s) | 176, 588 |
| PciI | ACATGT | 2 cut(s) | 329, 1113 |
| PciSI | GCTCTTC | 1 cut(s) | 62 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 66, 1428 |
| PfeI | GAWTC | 6 cut(s) | 679, 764, 791, 878, 1171, 1529 |
| PkrI | GCNGC | 7 cut(s) | 31, 34, 275, 837, 946, 1108, 1400 |
| PleI | GAGTC | 1 cut(s) | 349 |
| PpsI | GAGTC | 1 cut(s) | 349 |
| PscI | ACATGT | 2 cut(s) | 329, 1113 |
| Psp6I | CCWGG | 2 cut(s) | 947, 1550 |
| PspGI | CCWGG | 2 cut(s) | 947, 1550 |
| PspN4I | GGNNCC | 2 cut(s) | 499, 1500 |
| PvuII | CAGCTG | 1 cut(s) | 1008 |
| RsaI | GTAC | 1 cut(s) | 1547 |
| RsaNI | GTAC | 1 cut(s) | 1546 |
| RseI | CAYNNNNRTG | 3 cut(s) | 176, 588, 1515 |
| SapI | GCTCTTC | 1 cut(s) | 62 |
| SaqAI | TTAA | 5 cut(s) | 309, 414, 633, 758, 1455 |
| SatI | GCNGC | 7 cut(s) | 30, 33, 274, 836, 945, 1107, 1399 |
| Sau3AI | GATC | 4 cut(s) | 160, 601, 1196, 1315 |
| ScaI | AGTACT | 1 cut(s) | 1547 |
| SchI | GAGTC | 1 cut(s) | 349 |
| ScrFI | CCNGG | 4 cut(s) | 91, 92, 949, 1552 |
| SduI | GDGCHC | 1 cut(s) | 185 |
| SfaNI | GCATC | 4 cut(s) | 480, 919, 1039, 1351 |
| SmaI | CCCGGG | 1 cut(s) | 92 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 176, 588, 1515 |
| SmlI | CTYRAG | 2 cut(s) | 407, 575 |
| SmoI | CTYRAG | 2 cut(s) | 407, 575 |
| Sse9I | AATT | 8 cut(s) | 74, 278, 825, 1320, 1346, 1376, 1390, 1561 |
| SsiI | CCGC | 5 cut(s) | 29, 33, 155, 288, 1399 |
| SspI | AATATT | 2 cut(s) | 565, 631 |
| SspMI | CTAG | 5 cut(s) | 494, 665, 710, 1175, 1326 |
| StyD4I | CCNGG | 4 cut(s) | 89, 90, 947, 1550 |
| StyI | CCWWGG | 2 cut(s) | 617, 839 |
| TaaI | ACNGT | 6 cut(s) | 152, 206, 1078, 1250, 1311, 1432 |
| TaiI | ACGT | 4 cut(s) | 99, 610, 639, 999 |
| TaqI | TCGA | 3 cut(s) | 159, 1268, 1468 |
| TasI | AATT | 8 cut(s) | 74, 278, 825, 1320, 1346, 1376, 1390, 1561 |
| TatI | WGTACW | 1 cut(s) | 1545 |
| TauI | GCSGC | 3 cut(s) | 32, 35, 1401 |
| TfiI | GAWTC | 6 cut(s) | 679, 764, 791, 878, 1171, 1529 |
| Tru1I | TTAA | 5 cut(s) | 309, 414, 633, 758, 1455 |
| Tru9I | TTAA | 5 cut(s) | 309, 414, 633, 758, 1455 |
| TscAI | CASTG | 5 cut(s) | 157, 730, 1255, 1348, 1539 |
| TseFI | GTSAC | 4 cut(s) | 367, 622, 1339, 1554 |
| TseI | GCWGC | 4 cut(s) | 273, 835, 944, 1106 |
| Tsp45I | GTSAC | 4 cut(s) | 367, 622, 1339, 1554 |
| TspDTI | ATGAA | 8 cut(s) | 114, 287, 816, 1137, 1270, 1383, 1529, 1533 |
| TspGWI | ACGGA | 1 cut(s) | 58 |
| TspMI | CCCGGG | 1 cut(s) | 90 |
| TspRI | CASTG | 5 cut(s) | 157, 730, 1255, 1348, 1539 |
| XapI | RAATTY | 3 cut(s) | 278, 1346, 1376 |
| XceI | RCATGY | 3 cut(s) | 333, 1117, 1372 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 266, 846 |
| XmaI | CCCGGG | 1 cut(s) | 90 |
| XspI | CTAG | 5 cut(s) | 494, 665, 710, 1175, 1326 |
| ZraI | GACGTC | 1 cut(s) | 97 |
| ZrmI | AGTACT | 1 cut(s) | 1547 |