MD03G1217000.v1.1

Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
Physical Location & Seq
Reverse (-)
30116176 .. 30121173
4998 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1217000.v1.1.491

Sequence Viewer

Length: 1857 bp
ATGGTGGCCAAGCTCGTTCTCAGGCCACCTCACTCTCTTCCCCTCTCCACTCTCCCCTCAAAATTCCTCATCTTCCCCAAAATACCCTCCCTCCCCAAAAGATTCCTCATCGTCTCCCTCTTCTCCGCCACCGCCGCCGCTCAAACCCATCCCCAAATTTCAAACCCAAACAATTCCTCATACTTCTACGGACCCTCCCTCCGCAAGGGTACCCACCCCTTAACTCTCCGGTCTCACCCTCCCTTCACGAAAACCGAGGACGACTTCGACGACGACGATTTGTTCAACGAAGACAGCTTCAGTAGGGTTTTCGACATCGCGGCGCTTCGAGTCCCTGCAAAAGACTGTTTTGCCCTCGAGAGCCGTCTCCGGGGCCACTTGCTGAACTGGCCTCGCATCCGCAACATCGGCAGAGTCCCCGGCGACGAGGTGGAAGCCGAGCTCGCCGAGCTTCTCGCCAATCAGGGAAGTGACCTCGAAGACGAAAATGCCCTTGCCTCGTTGAATCGCCGAATGTACGGGAAATCGGAGGGCGACGGCGAGCCTTTGAGTCCGGTGCTGTACAGGGAGAAGCTTGCGAAGACGTTCGATTCGCGGGGGTACGTGAAGTTCCGAAACCTTGCGAGGATGTCGAGGCCGAACCAGAGGAAGAAGAGGGGGGATGAGGAAGGTGAAGGCGGTGAAGGGAAGAAGAGATGGGGGAAGAGCGAGTTTTCGGTGCTGGAGGTTGTGGATGACGAAGAGGGTGAAGGAGAAGGGGAGGACTTGAAGGGTTTGTTGGGGGATGAGTTTGAGGGCAGGAGGAAATGGAGAGGATCCACACGGTTGCTGCTATTGGATGAGAGGTACGCGAAAAAAGGGGTGGAGGAGTTGCCTGAGGCAATCAAGGTGGTGATGAAAGAAAATACCAGGACAAGTATGAGGCCCGCTTTTGAGCTTGTGAGATGCAAACTGACTGTTTTTTACGAGTACTGGCAGATGAATGAGATATTGGAGGCTTTGCTGCCTGAAGGTATGATTGTTCCTTCAGCCTTTGAAACAGTCGGGCATATTGCACACCTAAACCTGAGAGATGAACATTTACCATACAAAAAGCTTATAGCAAAGGTGATTCTTGATAAAAATAAACCAAAGATTCAGACGGTTGTCAATAAAATTGATGCCATTCATAATGACTACAGAACGATGCAACTTGAAGTTTTAGCTGGGAATCGTTCCCTTGTGACTACCGTAGTTGAAAATGGGTTGCGCTTTCATGTTGACCTAGCAACAGTGTATTGGAATTCCAGGCTTGCAACCGAAAGACAAAGGCTTGTAAACAGCTTTACACGGAAAGATGTTGTGTGTGATGTTTTCACTGGGGTTGGCCCAATAGCAGTGTCTGCGGCAAGGATTGTAAAACGAGTATATGCCAATGATTTGAATCCCAACGCAATTGAATATCTGGAAAGAAATAGTGTCATCAACAAACTTGAAAGGAAGATTAAGGTCTTCAACATGGATGGAAGGAGGTTCATTGGTGCTATGTTTGCAAGTGATAAGGCTAAGTCCATAACTCAAGTGGTAATGAATTTGCCAAATGATGCTGCGGAGTATCTTGATGCATTTCAGGGAATATTAGTAGATAGACCAACGGAAGAAGAATTTACCTTGCCAATGATCCATGTTTATGGATTCTCCAAAGCTCAAGATCCGGAGTTTGACTTTCATCAGAGAATAAGAATTGCGCTCTCAGAAGCGGCAGTTGATGTAGAAATGCGTAGGGTACGCCTTGTTGCACCAGGAAAATGGATGTTGTGTGCGTCATTCATCCTCCCTAAGAGTGTCGCTTATGCAAAACCAACTTTGGATATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

619

Amino Acids

70.18

Weight (kDa)

8.37

Isoelectric Point (pI)

39.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TYW2_N_2 PF25133 327 - 405 7.9e-22 TYW2 N-terminal domain
TRM5-TYW2_MTfase PF02475 409 - 543 7.3e-28 TRM5/TYW2 methyltransferase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011880)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 209
AccB1I GGYRCC 1 cut(s) 209
AccBSI CCGCTC 1 cut(s) 140
AccII CGCG 3 cut(s) 320, 595, 851
AccIII TCCGGA 1 cut(s) 1693
AclWI GGATC 4 cut(s) 810, 823, 1654, 1685
AcoI YGGCCR 1 cut(s) 6
AcsI RAATTY 5 cut(s) 62, 156, 1282, 1570, 1643
AcuI CTGAAG 3 cut(s) 283, 1011, 1029
AfaI GTAC 7 cut(s) 211, 518, 563, 602, 848, 971, 1767
AfiI CCNNNNNNNGG 2 cut(s) 205, 370
AjnI CCWGG 3 cut(s) 908, 1286, 1780
AjuI GAANNNNNNNTTGG 4 cut(s) 761, 793, 974, 1006
Alw21I GWGCWC 1 cut(s) 444
Alw26I GTCTC 3 cut(s) 118, 237, 371
AlwI GGATC 4 cut(s) 810, 823, 1654, 1685
AlwNI CAGNNNCTG 1 cut(s) 1382
Ama87I CYCGRG 1 cut(s) 356
Aor13HI TCCGGA 1 cut(s) 1693
AoxI GGCC 7 cut(s) 6, 23, 373, 389, 635, 923, 1366
ApeKI GCWGC 3 cut(s) 829, 1003, 1586
ApoI RAATTY 5 cut(s) 62, 156, 1282, 1570, 1643
ArsI GACNNNNNNTTYG 2 cut(s) 574, 606
Asp700I GAANNNNTTC 1 cut(s) 584
Asp718I GGTACC 1 cut(s) 209
AspLEI GCGC 3 cut(s) 325, 1251, 1729
AspS9I GGNCC 4 cut(s) 191, 373, 924, 1367
AsuC2I CCSGG 2 cut(s) 371, 420
AsuHPI GGTGA 6 cut(s) 227, 683, 692, 758, 904, 1120
AvaI CYCGRG 1 cut(s) 356
AvaII GGWCC 1 cut(s) 191
AxyI CCTNAGG 1 cut(s) 876
BalI TGGCCA 1 cut(s) 8
BamHI GGATCC 1 cut(s) 815
BanI GGYRCC 1 cut(s) 209
BanII GRGCYC 1 cut(s) 444
BbsI GAAGAC 4 cut(s) 297, 486, 587, 1483
Bbv12I GWGCWC 1 cut(s) 444
BbvI GCAGC 3 cut(s) 816, 990, 1573
BccI CCATC 3 cut(s) 156, 690, 1496
BceAI ACGGC 2 cut(s) 348, 553
BciT130I CCWGG 3 cut(s) 910, 1288, 1782
BcnI CCSGG 2 cut(s) 371, 420
BcoDI GTCTC 3 cut(s) 118, 237, 371
BfaI CTAG 1 cut(s) 1265
BfmI CTRYAG 1 cut(s) 1177
BfoI RGCGCY 1 cut(s) 326
BisI GCNGC 8 cut(s) 135, 138, 321, 830, 1004, 1386, 1587, 1740
BlsI GCNGC 8 cut(s) 136, 139, 322, 831, 1005, 1387, 1588, 1741
BmcAI AGTACT 1 cut(s) 971
Bme1390I CCNGG 5 cut(s) 371, 420, 910, 1288, 1782
Bme18I GGWCC 1 cut(s) 191
BmeT110I CYCGRG 1 cut(s) 356
BmgT120I GGNCC 4 cut(s) 191, 373, 924, 1367
BmiI GGNNCC 4 cut(s) 193, 211, 374, 817
BmrFI CCNGG 5 cut(s) 371, 420, 910, 1288, 1782
BmrI ACTGGG 1 cut(s) 1368
BmsI GCATC 6 cut(s) 405, 935, 1150, 1176, 1573, 1591
BmuI ACTGGG 1 cut(s) 1368
BoxI GACNNNNGTC 1 cut(s) 1145
BpiI GAAGAC 4 cut(s) 297, 486, 587, 1483
BpmI CTGGAG 1 cut(s) 743
BpuEI CTTGAG 2 cut(s) 1542, 1671
BpuMI CCSGG 2 cut(s) 371, 420
BsaAI YACGTR 1 cut(s) 604
BsaBI GATNNNNATC 1 cut(s) 1422
BsaI GGTCTC 1 cut(s) 237
BsaJI CCNNGG 3 cut(s) 255, 370, 418
BsaWI WCCGGW 3 cut(s) 228, 553, 1693
BsaXI ACNNNNNCTCC 6 cut(s) 75, 105, 179, 183, 209, 213
Bsc4I CCNNNNNNNGG 2 cut(s) 205, 370
Bse1I ACTGG 3 cut(s) 392, 977, 1363
Bse21I CCTNAGG 1 cut(s) 876
Bse8I GATNNNNATC 1 cut(s) 1422
BseAI TCCGGA 1 cut(s) 1693
BseBI CCWGG 3 cut(s) 910, 1288, 1782
BseDI CCNNGG 3 cut(s) 255, 370, 418
BseJI GATNNNNATC 1 cut(s) 1422
BseLI CCNNNNNNNGG 2 cut(s) 205, 370
BseMII CTCAG 4 cut(s) 34, 867, 1058, 1746
BseNI ACTGG 3 cut(s) 392, 977, 1363
BseRI GAGGAG 1 cut(s) 881
BseXI GCAGC 3 cut(s) 816, 990, 1573
BseYI CCCAGC 1 cut(s) 1205
Bsh1236I CGCG 3 cut(s) 320, 595, 851
BshFI GGCC 7 cut(s) 8, 25, 375, 391, 637, 925, 1368
BshNI GGYRCC 1 cut(s) 209
BsiHKAI GWGCWC 1 cut(s) 444
BsiHKCI CYCGRG 1 cut(s) 356
BsiSI CCGG 5 cut(s) 229, 370, 420, 554, 1694
BslFI GGGAC 2 cut(s) 317, 401
BslI CCNNNNNNNGG 2 cut(s) 205, 370
BsmAI GTCTC 3 cut(s) 118, 237, 371
BsmBI CGTCTC 2 cut(s) 118, 371
BsmFI GGGAC 2 cut(s) 317, 401
BsnI GGCC 7 cut(s) 8, 25, 375, 391, 637, 925, 1368
Bso31I GGTCTC 1 cut(s) 237
BsoBI CYCGRG 1 cut(s) 356
Bsp1286I GDGCHC 1 cut(s) 444
Bsp13I TCCGGA 1 cut(s) 1693
Bsp1407I TGTACA 1 cut(s) 561
Bsp143I GATC 3 cut(s) 815, 1659, 1690
BspANI GGCC 7 cut(s) 8, 25, 375, 391, 637, 925, 1368
BspCNI CTCAG 4 cut(s) 33, 868, 1059, 1745
BspEI TCCGGA 1 cut(s) 1693
BspFNI CGCG 3 cut(s) 320, 595, 851
BspLI GGNNCC 4 cut(s) 193, 211, 374, 817
BspPI GGATC 4 cut(s) 810, 823, 1654, 1685
BspQI GCTCTTC 1 cut(s) 698
BspT107I GGYRCC 1 cut(s) 209
BspTNI GGTCTC 1 cut(s) 237
BsrBI CCGCTC 1 cut(s) 140
BsrGI TGTACA 1 cut(s) 561
BsrI ACTGG 3 cut(s) 392, 977, 1363
BssECI CCNNGG 3 cut(s) 255, 370, 418
BssMI GATC 3 cut(s) 815, 1659, 1690
Bst2UI CCWGG 3 cut(s) 910, 1288, 1782
Bst4CI ACNGT 7 cut(s) 347, 825, 958, 1042, 1144, 1231, 1273
Bst6I CTCTTC 6 cut(s) 42, 125, 647, 686, 698, 735
BstAPI GCANNNNNTGC 1 cut(s) 1382
BstAUI TGTACA 1 cut(s) 561
BstBAI YACGTR 1 cut(s) 604
BstC8I GCNNGC 5 cut(s) 444, 542, 576, 927, 1293
BstDEI CTNAG 6 cut(s) 20, 876, 1067, 1545, 1732, 1818
BstENI CCTNNNNNAGG 1 cut(s) 203
BstFNI CGCG 3 cut(s) 320, 595, 851
BstH2I RGCGCY 1 cut(s) 326
BstHHI GCGC 3 cut(s) 325, 1251, 1729
BstKTI GATC 3 cut(s) 818, 1662, 1693
BstMAI GTCTC 3 cut(s) 118, 237, 371
BstMBI GATC 3 cut(s) 815, 1659, 1690
BstMWI GCNNNNNNNGC 7 cut(s) 134, 388, 408, 443, 448, 1382, 1529
BstNI CCWGG 3 cut(s) 910, 1288, 1782
BstPAI GACNNNNGTC 1 cut(s) 1145
BstSCI CCNGG 5 cut(s) 369, 418, 908, 1286, 1780
BstSFI CTRYAG 1 cut(s) 1177
BstUI CGCG 3 cut(s) 320, 595, 851
BstV1I GCAGC 3 cut(s) 816, 990, 1573
BstV2I GAAGAC 4 cut(s) 297, 486, 587, 1483
BstX2I RGATCY 2 cut(s) 815, 1690
BstXI CCANNNNNNTGG 2 cut(s) 1670, 1788
BstYI RGATCY 2 cut(s) 815, 1690
Bsu36I CCTNAGG 1 cut(s) 876
BsuRI GGCC 7 cut(s) 8, 25, 375, 391, 637, 925, 1368
BtgZI GCGATG 1 cut(s) 301
BtsI GCAGTG 1 cut(s) 1383
BtsIMutI CAGTG 3 cut(s) 1278, 1356, 1383
Cac8I GCNNGC 5 cut(s) 444, 542, 576, 927, 1293
CaiI CAGNNNCTG 1 cut(s) 1382
CfoI GCGC 3 cut(s) 325, 1251, 1729
Cfr13I GGNCC 4 cut(s) 191, 373, 924, 1367
CseI GACGC 1 cut(s) 1791
Csp6I GTAC 7 cut(s) 210, 517, 562, 601, 847, 970, 1766
CspCI CAANNNNNGTGG 2 cut(s) 870, 905
CviAII CATG 3 cut(s) 1256, 1498, 1664
CviQI GTAC 7 cut(s) 210, 517, 562, 601, 847, 970, 1766
DdeI CTNAG 6 cut(s) 20, 876, 1067, 1545, 1732, 1818
DpnI GATC 3 cut(s) 817, 1661, 1692
DpnII GATC 3 cut(s) 815, 1659, 1690
EaeI YGGCCR 1 cut(s) 6
Eam1104I CTCTTC 6 cut(s) 42, 125, 647, 686, 698, 735
EarI CTCTTC 6 cut(s) 42, 125, 647, 686, 698, 735
EciI GGCGGA 1 cut(s) 115
Ecl136II GAGCTC 1 cut(s) 442
Eco24I GRGCYC 1 cut(s) 444
Eco31I GGTCTC 1 cut(s) 237
Eco47I GGWCC 1 cut(s) 191
Eco53kI GAGCTC 1 cut(s) 442
Eco57I CTGAAG 3 cut(s) 283, 1011, 1029
Eco81I CCTNAGG 1 cut(s) 876
Eco88I CYCGRG 1 cut(s) 356
EcoICRI GAGCTC 1 cut(s) 442
EcoNI CCTNNNNNAGG 1 cut(s) 203
EcoRI GAATTC 1 cut(s) 1282
EcoRII CCWGG 3 cut(s) 908, 1286, 1780
EcoT22I ATGCAT 1 cut(s) 1606
EcoT38I GRGCYC 1 cut(s) 444
Esp3I CGTCTC 2 cut(s) 118, 371
FaeI CATG 3 cut(s) 1259, 1501, 1667
FaqI GGGAC 2 cut(s) 317, 401
FatI CATG 3 cut(s) 1255, 1497, 1663
FauI CCCGC 2 cut(s) 588, 934
Fnu4HI GCNGC 8 cut(s) 135, 138, 321, 830, 1004, 1386, 1587, 1740
FriOI GRGCYC 1 cut(s) 444
Fsp4HI GCNGC 8 cut(s) 135, 138, 321, 830, 1004, 1386, 1587, 1740
FspBI CTAG 1 cut(s) 1265
GlaI GCGC 3 cut(s) 324, 1250, 1728
GluI GCNGC 8 cut(s) 135, 138, 321, 830, 1004, 1386, 1587, 1740
GsaI CCCAGC 1 cut(s) 1209
GsuI CTGGAG 1 cut(s) 743
HaeII RGCGCY 1 cut(s) 326
HaeIII GGCC 7 cut(s) 8, 25, 375, 391, 637, 925, 1368
HapII CCGG 5 cut(s) 229, 370, 420, 554, 1694
HgaI GACGC 1 cut(s) 1791
HhaI GCGC 3 cut(s) 325, 1251, 1729
Hin1II CATG 3 cut(s) 1259, 1501, 1667
Hin6I GCGC 3 cut(s) 323, 1249, 1727
HinP1I GCGC 3 cut(s) 323, 1249, 1727
HincII GTYRAC 1 cut(s) 1261
HindII GTYRAC 1 cut(s) 1261
HindIII AAGCTT 2 cut(s) 572, 1094
HpaII CCGG 5 cut(s) 229, 370, 420, 554, 1694
HphI GGTGA 6 cut(s) 227, 683, 692, 758, 904, 1120
Hpy166II GTNNAC 2 cut(s) 1261, 1318
Hpy188I TCNGA 5 cut(s) 529, 614, 1140, 1713, 1735
Hpy188III TCNNGA 7 cut(s) 247, 358, 1115, 1445, 1598, 1688, 1694
Hpy8I GTNNAC 2 cut(s) 1261, 1318
Hpy99I CGWCG 5 cut(s) 272, 275, 278, 428, 539
HpyCH4III ACNGT 7 cut(s) 347, 825, 958, 1042, 1144, 1231, 1273
HpyCH4IV ACGT 2 cut(s) 584, 603
HpyCH4V TGCA 9 cut(s) 338, 948, 1055, 1189, 1295, 1532, 1604, 1778, 1835
HpyF10VI GCNNNNNNNGC 7 cut(s) 134, 388, 408, 443, 448, 1382, 1529
HpyF3I CTNAG 6 cut(s) 20, 876, 1067, 1545, 1732, 1818
HpySE526I ACGT 2 cut(s) 584, 603
Hsp92II CATG 3 cut(s) 1259, 1501, 1667
HspAI GCGC 3 cut(s) 323, 1249, 1727
Kpn2I TCCGGA 1 cut(s) 1693
KpnI GGTACC 1 cut(s) 213
Kzo9I GATC 3 cut(s) 815, 1659, 1690
LguI GCTCTTC 1 cut(s) 698
Lsp1109I GCAGC 3 cut(s) 816, 990, 1573
LweI GCATC 6 cut(s) 405, 935, 1150, 1176, 1573, 1591
MaeI CTAG 1 cut(s) 1265
MaeII ACGT 2 cut(s) 584, 603
MaeIII GTNAC 2 cut(s) 470, 1222
MalI GATC 3 cut(s) 817, 1661, 1692
MbiI CCGCTC 1 cut(s) 140
MboI GATC 3 cut(s) 815, 1659, 1690
MfeI CAATTG 1 cut(s) 1434
MflI RGATCY 2 cut(s) 815, 1690
MhlI GDGCHC 1 cut(s) 444
MlsI TGGCCA 1 cut(s) 8
MluCI AATT 9 cut(s) 62, 156, 172, 1155, 1282, 1434, 1570, 1643, 1722
MluNI TGGCCA 1 cut(s) 8
MlyI GAGTC 3 cut(s) 339, 423, 559
Mox20I TGGCCA 1 cut(s) 8
Mph1103I ATGCAT 1 cut(s) 1606
MroI TCCGGA 1 cut(s) 1693
MroXI GAANNNNTTC 1 cut(s) 584
MscI TGGCCA 1 cut(s) 8
MseI TTAA 2 cut(s) 221, 1485
MslI CAYNNNNRTG 1 cut(s) 1668
Msp20I TGGCCA 1 cut(s) 8
MspI CCGG 5 cut(s) 229, 370, 420, 554, 1694
MspR9I CCNGG 5 cut(s) 371, 420, 910, 1288, 1782
MunI CAATTG 1 cut(s) 1434
MvaI CCWGG 3 cut(s) 910, 1288, 1782
MvnI CGCG 3 cut(s) 320, 595, 851
MwoI GCNNNNNNNGC 7 cut(s) 134, 388, 408, 443, 448, 1382, 1529
NciI CCSGG 2 cut(s) 371, 420
NdeII GATC 3 cut(s) 815, 1659, 1690
NlaIII CATG 3 cut(s) 1259, 1501, 1667
NlaIV GGNNCC 4 cut(s) 193, 211, 374, 817
NmeAIII GCCGAG 2 cut(s) 463, 472
NmuCI GTSAC 2 cut(s) 470, 1222
NsiI ATGCAT 1 cut(s) 1606
PaeR7I CTCGAG 1 cut(s) 356
PciSI GCTCTTC 1 cut(s) 698
PcsI WCGNNNNNNNCGW 2 cut(s) 267, 273
PdmI GAANNNNTTC 1 cut(s) 584
PfeI GAWTC 8 cut(s) 102, 505, 590, 1111, 1135, 1210, 1423, 1674
PkrI GCNGC 8 cut(s) 136, 139, 322, 831, 1005, 1387, 1588, 1741
PleI GAGTC 3 cut(s) 338, 422, 558
PpsI GAGTC 3 cut(s) 338, 422, 558
Ppu21I YACGTR 1 cut(s) 604
PshAI GACNNNNGTC 1 cut(s) 1145
Psp124BI GAGCTC 1 cut(s) 444
Psp6I CCWGG 3 cut(s) 908, 1286, 1780
PspFI CCCAGC 1 cut(s) 1205
PspGI CCWGG 3 cut(s) 908, 1286, 1780
PspN4I GGNNCC 4 cut(s) 193, 211, 374, 817
PspPI GGNCC 4 cut(s) 191, 373, 924, 1367
PsrI GAACNNNNNNTAC 2 cut(s) 593, 625
PstNI CAGNNNCTG 1 cut(s) 1382
PsuI RGATCY 2 cut(s) 815, 1690
RsaI GTAC 7 cut(s) 211, 518, 563, 602, 848, 971, 1767
RsaNI GTAC 7 cut(s) 210, 517, 562, 601, 847, 970, 1766
RseI CAYNNNNRTG 1 cut(s) 1668
SacI GAGCTC 1 cut(s) 444
SapI GCTCTTC 1 cut(s) 698
SaqAI TTAA 2 cut(s) 221, 1485
SatI GCNGC 8 cut(s) 135, 138, 321, 830, 1004, 1386, 1587, 1740
Sau3AI GATC 3 cut(s) 815, 1659, 1690
Sau96I GGNCC 4 cut(s) 191, 373, 924, 1367
ScaI AGTACT 1 cut(s) 971
SchI GAGTC 3 cut(s) 339, 423, 559
ScrFI CCNGG 5 cut(s) 371, 420, 910, 1288, 1782
SduI GDGCHC 1 cut(s) 444
SfaNI GCATC 6 cut(s) 405, 935, 1150, 1176, 1573, 1591
SfcI CTRYAG 1 cut(s) 1177
Sfr274I CTCGAG 1 cut(s) 356
SinI GGWCC 1 cut(s) 191
SlaI CTCGAG 1 cut(s) 356
SmiMI CAYNNNNRTG 1 cut(s) 1668
SmlI CTYRAG 3 cut(s) 356, 1557, 1686
SmoI CTYRAG 3 cut(s) 356, 1557, 1686
Sse9I AATT 9 cut(s) 62, 156, 172, 1155, 1282, 1434, 1570, 1643, 1722
SspI AATATT 1 cut(s) 1617
SspMI CTAG 1 cut(s) 1265
SstI GAGCTC 1 cut(s) 444
StyD4I CCNGG 5 cut(s) 369, 418, 908, 1286, 1780
TaaI ACNGT 7 cut(s) 347, 825, 958, 1042, 1144, 1231, 1273
TaiI ACGT 2 cut(s) 587, 606
TaqI TCGA 7 cut(s) 267, 312, 328, 357, 477, 588, 632
TasI AATT 9 cut(s) 62, 156, 172, 1155, 1282, 1434, 1570, 1643, 1722
TatI WGTACW 2 cut(s) 561, 969
TauI GCSGC 5 cut(s) 137, 140, 323, 1388, 1742
TfiI GAWTC 8 cut(s) 102, 505, 590, 1111, 1135, 1210, 1423, 1674
Tru1I TTAA 2 cut(s) 221, 1485
Tru9I TTAA 2 cut(s) 221, 1485
TscAI CASTG 3 cut(s) 1278, 1363, 1383
TseFI GTSAC 2 cut(s) 470, 1222
TseI GCWGC 3 cut(s) 829, 1003, 1586
Tsp45I GTSAC 2 cut(s) 470, 1222
TspDTI ATGAA 9 cut(s) 911, 995, 1089, 1157, 1244, 1504, 1583, 1697, 1798
TspGWI ACGGA 3 cut(s) 204, 1345, 1649
TspRI CASTG 3 cut(s) 1278, 1363, 1383
VpaK11BI GGWCC 1 cut(s) 191
XagI CCTNNNNNAGG 1 cut(s) 203
XapI RAATTY 5 cut(s) 62, 156, 1282, 1570, 1643
XcmI CCANNNNNNNNNTGG 1 cut(s) 1558
XhoI CTCGAG 1 cut(s) 356
XmnI GAANNNNTTC 1 cut(s) 584
XspI CTAG 1 cut(s) 1265
ZrmI AGTACT 1 cut(s) 971
Zsp2I ATGCAT 1 cut(s) 1606
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.