Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0007130

Physical Location & Seq

Genomic Coordinates Reverse (-)

33986009 .. 33995156

Gene Structure 9148 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1252500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1851 bp

ATGTGCCGGCAGGAGGCGCGGGTGCGGATGTCGGCGGAGGAAGAAATTGCGGCGGAGGAAAGCCTCTCTGTCTATTGCAAGCCTGTTGAGTTCTACAACATTCTCCAACGCCGCGCTATTAGAAATCCGGCGTTTCTTCAAAGATGTTTGAGCTACAAAATAGAGGCCAAGCACAGAAGGAGGATACAAATGACGGTTTCCATTTCGATGTATGAGAAGGAAGGTGTACAAACCCATAATCTCTTTCCTTTGTATGTGTTTTTGGCCAGACTAGTTCCTGATGTTGCGGTTCCAGAGTATTCTGCTACATATCGATTCAGTCGAGCTTGCATGTTAAGCAATTCCACTGGGGTTGATGGGAGTAGTCAACTTCAAGCACATTTTATTCTGCCTGACATTAATAAGCTAACACTGGAGGCTAAATCTGGCTCACTTGCAATCTTGCTCGTCAGCTTTGTGGGAGCACAAAATCCATTTCGTGGAATCAATTTATCCAAGGGTCCTGTGGATATGTCTTCTTTCCCTTCAAATGCAGGAGGATATTGTCTATGGAGCAAGATACCACTTGAATTACTTTATATCTCTTGGGAGAATTCTCCTAATTTTGGTTTGGGACAGAGAGCTGAGATGATTTCAACAACTGACATGCGCTCTTGCTTCTTGAAGTTGAGCTGTTTAAATGAGAACAAGTGCCTTATGATTGCAACTCCCCATAATCCAGAAACTGTTGTCATTTCTCAGCTAGTGCAGGTCACCATTTCTGCAGAGGAATTTGGTGCTAGGGAAAAATCACCTTATAGCACTTACATATGTAGTGACATTCCTTCTTCATCATTGCCTCATATCATTCGGTTAAGGGCAGGAAATGTGATTTTTAATTATAGATACTACAACAATACATTGCAACGGACAGAAGTAACCGAAGATTTTTCTTGTCCATTTTGCTTGGTTAGTTGTGCAAGCTTCAAGGGTCTGAGACATCATTTGTTCTCATCACATGATCTCTTCAACTTTGAATTTTGGGTAACCGAAGAGTATCAAGCTGTAAATGTGTCTGTGAAAACTAATTATTGGGGATCTGAGATTGTTGCTGATGGTGTTGATCCTAAGCAACAAGTATTCTCCTTTTGCTCAAAGCCACTAAGACGCAGAAGACCCAAGAGCCTATATCAAAATGCAAAGCACGTACATCCTCACGTCTTAGAGTCTGACTTTCCTTCTGGACTTTGTGAGCTTTTGGACAAGGCCGATGATGCTCATTCTAGTAGAGGTGATAAGGCTAGAATATCAGGGTTTTCAAGCTCCATGCTACCGTCATATGGTGATCCTGGTTGCGTTCAGTCAGTATCGGGAAACAATTTTGCACCTCCAACGCTTCCATTTGCAAAGACAAGAAAGTTATCTGTTGAGCGCCCAGACCCTAGAAACTGTGCCCTCCTGCGGAAGAGAAAGTTCTTTCACTCCCATAGGGCCCAGCCGATGATGTTGGAACAAGTTTTGTCAGATCAGAATAGTGAGGATGAGGTTGATGATGATGTTGCTGATCTTGAAGACCGAAGGATGCTTGATGATTTTGTTGATGTGACTAAAGATGAGAAGCAAATGATGCATATGTGGAACTCCTTCGTGAGGAAGCAACAGGTATTGGCCGACGGTCATATTCCTTGGGCATGTGAGGCATTTTCGAGATTGCACGAGCATGATCTTGTCAAATCCCCTGCTCTGATATGGTGTTGGAGATTATTTATGATCAAATTGTGGAATCATGGTCTCCTTGATGCACGCACCATGAACAACTGTAACATTATTCTTGAACAATGTCAAAGCCTGGCTTCGGAACCCCAAAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006349 GO:0006355 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009889 GO:0009909 GO:0009910 GO:0009987 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0031490 GO:0034641 GO:0040029 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0048519 GO:0048580 GO:0048581 GO:0048831 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051171 GO:0051239 GO:0051241 GO:0051252 GO:0060255 GO:0065007 GO:0071514 GO:0071704 GO:0080090 GO:0097159 GO:0140110 GO:1901360 GO:1901363 GO:1903506 GO:2000026 GO:2000112 GO:2000241 GO:2000242 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

VEFS-Box

Protein Analysis

617

Amino Acids

70.19

Weight (kDa)

7.01

Isoelectric Point (pI)

54.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF7651	PF24663	51 - 261	1.3e-89	Domain of unknown function (DUF7651)
Zn_SUZ12	PF23320	288 - 355	4.2e-33	Polycomb protein SUZ12-like, Zn domain
VEFS-Box	PF09733	477 - 597	1.5e-52	VEFS-Box of polycomb protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007130)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G51230 AT5G51230 AT5G51230
fragaria_vesca	FvH4_3g17191
malus_domestica	MD03G1252500.v1.1 MD11G1274700.v1.1
prunus_persica	Prupe.4G152500_v2.0.a1 Prupe.4G152500_v2.0.a1 Prupe.4G152500_v2.0.a1 Prupe.4G152500_v2.0.a1 Prupe.4G152500_v2.0.a1
pyrus_communis	pycom03g20030 pycom11g24240
rosa_chinensis	RchiOBHm_Chr5g0028591
rosa_laevigata	RLG00000033102 RLG00000033103 RLG00000033104
rosa_multiflora	Rmu_sc0001575.1_g000016
rosa_roxburghii	Rroxscaffold_1G00051190
rosa_rugosa	Rorug05G0109700
rosa_samantha	Rh5AG201800 Rh5BG200000 Rh5CG220300 Rh5DG203200
rosa_wichuraiana	Rw5G018290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	739
AccB7I	CCANNNNNTGG	1 cut(s)	479
AccII	CGCG	2 cut(s)	19, 114
AciI	CCGC	8 cut(s)	19, 25, 35, 50, 53, 112, 287, 1441
AclWI	GGATC	3 cut(s)	1084, 1097, 1319
AcoI	YGGCCR	2 cut(s)	264, 1647
AcsI	RAATTY	3 cut(s)	592, 770, 1016
AfaI	GTAC	2 cut(s)	228, 1188
AfiI	CCNNNNNNNGG	7 cut(s)	13, 479, 605, 1319, 1440, 1629, 1834
AhlI	ACTAGT	1 cut(s)	271
AjiI	CACGTC	1 cut(s)	1198
AjnI	CCWGG	2 cut(s)	1327, 1827
Alw21I	GWGCWC	1 cut(s)	466
Alw26I	GTCTC	2 cut(s)	970, 1775
AlwI	GGATC	3 cut(s)	1084, 1097, 1319
AlwNI	CAGNNNCTG	1 cut(s)	725
AoxI	GGCC	5 cut(s)	165, 264, 1245, 1470, 1647
ApaI	GGGCCC	1 cut(s)	1474
ApoI	RAATTY	3 cut(s)	592, 770, 1016
AseI	ATTAAT	1 cut(s)	399
Asp700I	GAANNNNTTC	1 cut(s)	1622
AspLEI	GCGC	4 cut(s)	19, 116, 651, 1413
AspS9I	GGNCC	3 cut(s)	500, 1470, 1471
AsuHPI	GGTGA	4 cut(s)	745, 783, 1283, 1334
AvaII	GGWCC	1 cut(s)	500
BaeGI	GKGCMC	2 cut(s)	1435, 1474
BalI	TGGCCA	1 cut(s)	266
BanII	GRGCYC	1 cut(s)	1474
BauI	CACGAG	1 cut(s)	1694
BbsI	GAAGAC	3 cut(s)	507, 1159, 1557
Bbv12I	GWGCWC	1 cut(s)	466
BccI	CCATC	2 cut(s)	350, 1088
BciT130I	CCWGG	2 cut(s)	1329, 1829
BciVI	GTATCC	1 cut(s)	177
BclI	TGATCA	1 cut(s)	1749
BcoDI	GTCTC	2 cut(s)	970, 1775
BcuI	ACTAGT	1 cut(s)	271
BfaI	CTAG	6 cut(s)	272, 743, 780, 1263, 1281, 1422
BfmI	CTRYAG	1 cut(s)	762
BfoI	RGCGCY	1 cut(s)	1414
BfuAI	ACCTGC	1 cut(s)	739
BfuI	GTATCC	1 cut(s)	177
BisI	GCNGC	2 cut(s)	51, 112
BlsI	GCNGC	2 cut(s)	52, 113
Bme1390I	CCNGG	2 cut(s)	1329, 1829
Bme18I	GGWCC	1 cut(s)	500
BmgBI	CACGTC	1 cut(s)	1198
BmgT120I	GGNCC	3 cut(s)	500, 1470, 1471
BmiI	GGNNCC	4 cut(s)	291, 501, 1472, 1839
BmrFI	CCNGG	2 cut(s)	1329, 1829
BmrI	ACTGGG	1 cut(s)	357
BmsI	GCATC	4 cut(s)	1243, 1551, 1596, 1768
BmuI	ACTGGG	1 cut(s)	357
BpiI	GAAGAC	3 cut(s)	507, 1159, 1557
BpmI	CTGGAG	1 cut(s)	434
Bpu10I	CCTNAGC	1 cut(s)	1107
Bsa29I	ATCGAT	1 cut(s)	313
BsaAI	YACGTR	1 cut(s)	1186
BsaI	GGTCTC	1 cut(s)	1775
BsaJI	CCNNGG	2 cut(s)	495, 1664
Bsc4I	CCNNNNNNNGG	7 cut(s)	13, 479, 605, 1319, 1440, 1629, 1834
Bse118I	RCCGGY	1 cut(s)	6
Bse1I	ACTGG	2 cut(s)	352, 417
Bse3DI	GCAATG	2 cut(s)	833, 899
BseBI	CCWGG	2 cut(s)	1329, 1829
BseCI	ATCGAT	1 cut(s)	313
BseDI	CCNNGG	2 cut(s)	495, 1664
BseGI	GGATG	4 cut(s)	33, 1189, 1525, 1566
BseLI	CCNNNNNNNGG	7 cut(s)	13, 479, 605, 1319, 1440, 1629, 1834
BseMI	GCAATG	2 cut(s)	833, 899
BseMII	CTCAG	4 cut(s)	615, 752, 965, 1071
BseNI	ACTGG	2 cut(s)	352, 417
BseSI	GKGCMC	2 cut(s)	1435, 1474
BseYI	CCCAGC	1 cut(s)	1473
BsgI	GTGCAG	1 cut(s)	767
Bsh1236I	CGCG	2 cut(s)	19, 114
BshFI	GGCC	5 cut(s)	167, 266, 1247, 1472, 1649
BshVI	ATCGAT	1 cut(s)	313
BsiHKAI	GWGCWC	1 cut(s)	466
BsiSI	CCGG	2 cut(s)	7, 128
BslFI	GGGAC	1 cut(s)	627
BslI	CCNNNNNNNGG	7 cut(s)	13, 479, 605, 1319, 1440, 1629, 1834
BsmAI	GTCTC	2 cut(s)	970, 1775
BsmFI	GGGAC	1 cut(s)	627
BsnI	GGCC	5 cut(s)	167, 266, 1247, 1472, 1649
Bso31I	GGTCTC	1 cut(s)	1775
Bsp120I	GGGCCC	1 cut(s)	1470
Bsp1286I	GDGCHC	3 cut(s)	466, 1435, 1474
Bsp1407I	TGTACA	1 cut(s)	226
Bsp143I	GATC	8 cut(s)	1000, 1076, 1102, 1324, 1504, 1543, 1702, 1749
BspACI	CCGC	8 cut(s)	19, 25, 35, 50, 53, 112, 287, 1441
BspANI	GGCC	5 cut(s)	167, 266, 1247, 1472, 1649
BspCNI	CTCAG	4 cut(s)	616, 751, 966, 1072
BspDI	ATCGAT	1 cut(s)	313
BspFNI	CGCG	2 cut(s)	19, 114
BspLI	GGNNCC	4 cut(s)	291, 501, 1472, 1839
BspMAI	CTGCAG	1 cut(s)	766
BspMI	ACCTGC	1 cut(s)	739
BspPI	GGATC	3 cut(s)	1084, 1097, 1319
BspTNI	GGTCTC	1 cut(s)	1775
BsrDI	GCAATG	2 cut(s)	833, 899
BsrFI	RCCGGY	1 cut(s)	6
BsrGI	TGTACA	1 cut(s)	226
BsrI	ACTGG	2 cut(s)	352, 417
BssAI	RCCGGY	1 cut(s)	6
BssECI	CCNNGG	2 cut(s)	495, 1664
BssMI	GATC	8 cut(s)	1000, 1076, 1102, 1324, 1504, 1543, 1702, 1749
BssSI	CACGAG	1 cut(s)	1694
BssT1I	CCWWGG	2 cut(s)	495, 1664
Bst2BI	CACGAG	1 cut(s)	1694
Bst2UI	CCWGG	2 cut(s)	1329, 1829
Bst4CI	ACNGT	6 cut(s)	196, 727, 1314, 1430, 1655, 1799
Bst6I	CTCTTC	3 cut(s)	1010, 1026, 1439
BstAPI	GCANNNNNTGC	1 cut(s)	1606
BstAUI	TGTACA	1 cut(s)	226
BstBAI	YACGTR	1 cut(s)	1186
BstC8I	GCNNGC	5 cut(s)	8, 80, 328, 961, 1783
BstDEI	CTNAG	7 cut(s)	624, 738, 974, 1080, 1107, 1142, 1201
BstEII	GGTNACC	2 cut(s)	751, 1024
BstENI	CCTNNNNNAGG	1 cut(s)	1627
BstF5I	GGATG	4 cut(s)	33, 1189, 1525, 1566
BstFNI	CGCG	2 cut(s)	19, 114
BstH2I	RGCGCY	1 cut(s)	1414
BstHHI	GCGC	4 cut(s)	19, 116, 651, 1413
BstKTI	GATC	8 cut(s)	1003, 1079, 1105, 1327, 1507, 1546, 1705, 1752
BstMAI	GTCTC	2 cut(s)	970, 1775
BstMBI	GATC	8 cut(s)	1000, 1076, 1102, 1324, 1504, 1543, 1702, 1749
BstMWI	GCNNNNNNNGC	5 cut(s)	16, 336, 1253, 1606, 1676
BstNI	CCWGG	2 cut(s)	1329, 1829
BstNSI	RCATGY	3 cut(s)	334, 649, 1674
BstPI	GGTNACC	2 cut(s)	751, 1024
BstSCI	CCNGG	2 cut(s)	1327, 1827
BstSFI	CTRYAG	1 cut(s)	762
BstSLI	GKGCMC	2 cut(s)	1435, 1474
BstUI	CGCG	2 cut(s)	19, 114
BstV2I	GAAGAC	3 cut(s)	507, 1159, 1557
BstX2I	RGATCY	1 cut(s)	1076
BstYI	RGATCY	1 cut(s)	1076
Bsu15I	ATCGAT	1 cut(s)	313
BsuI	GTATCC	1 cut(s)	177
BsuRI	GGCC	5 cut(s)	167, 266, 1247, 1472, 1649
BsuTUI	ATCGAT	1 cut(s)	313
BtrI	CACGTC	1 cut(s)	1198
BtsCI	GGATG	4 cut(s)	33, 1189, 1525, 1566
BtsIMutI	CAGTG	2 cut(s)	345, 410
BveI	ACCTGC	1 cut(s)	739
Cac8I	GCNNGC	5 cut(s)	8, 80, 328, 961, 1783
CaiI	CAGNNNCTG	1 cut(s)	725
CfoI	GCGC	4 cut(s)	19, 116, 651, 1413
Cfr10I	RCCGGY	1 cut(s)	6
Cfr13I	GGNCC	3 cut(s)	500, 1470, 1471
ClaI	ATCGAT	1 cut(s)	313
CseI	GACGC	1 cut(s)	1155
Csp6I	GTAC	2 cut(s)	227, 1187
CspCI	CAANNNNNGTGG	2 cut(s)	334, 369
CviAII	CATG	8 cut(s)	331, 646, 998, 1306, 1671, 1700, 1766, 1789
CviQI	GTAC	2 cut(s)	227, 1187
DdeI	CTNAG	7 cut(s)	624, 738, 974, 1080, 1107, 1142, 1201
DpnI	GATC	8 cut(s)	1002, 1078, 1104, 1326, 1506, 1545, 1704, 1751
DpnII	GATC	8 cut(s)	1000, 1076, 1102, 1324, 1504, 1543, 1702, 1749
DraI	TTTAAA	1 cut(s)	678
EaeI	YGGCCR	2 cut(s)	264, 1647
Eam1104I	CTCTTC	3 cut(s)	1010, 1026, 1439
EarI	CTCTTC	3 cut(s)	1010, 1026, 1439
EciI	GGCGGA	2 cut(s)	50, 68
Eco130I	CCWWGG	2 cut(s)	495, 1664
Eco24I	GRGCYC	1 cut(s)	1474
Eco31I	GGTCTC	1 cut(s)	1775
Eco47I	GGWCC	1 cut(s)	500
Eco91I	GGTNACC	2 cut(s)	751, 1024
EcoNI	CCTNNNNNAGG	1 cut(s)	1627
EcoO109I	RGGNCCY	2 cut(s)	500, 1470
EcoO65I	GGTNACC	2 cut(s)	751, 1024
EcoRI	GAATTC	1 cut(s)	592
EcoRII	CCWGG	2 cut(s)	1327, 1827
EcoT14I	CCWWGG	2 cut(s)	495, 1664
EcoT22I	ATGCAT	1 cut(s)	1611
EcoT38I	GRGCYC	1 cut(s)	1474
ErhI	CCWWGG	2 cut(s)	495, 1664
FaeI	CATG	8 cut(s)	334, 649, 1001, 1309, 1674, 1703, 1769, 1792
FalI	AAGNNNNNCTT	2 cut(s)	1816, 1848
FaqI	GGGAC	1 cut(s)	627
FatI	CATG	8 cut(s)	330, 645, 997, 1305, 1670, 1699, 1765, 1788
FauI	CCCGC	1 cut(s)	12
FauNDI	CATATG	3 cut(s)	809, 1318, 1611
FbaI	TGATCA	1 cut(s)	1749
Fnu4HI	GCNGC	2 cut(s)	51, 112
FokI	GGATG	4 cut(s)	40, 1176, 1532, 1573
FriOI	GRGCYC	1 cut(s)	1474
Fsp4HI	GCNGC	2 cut(s)	51, 112
FspBI	CTAG	6 cut(s)	272, 743, 780, 1263, 1281, 1422
GlaI	GCGC	4 cut(s)	18, 115, 650, 1412
GluI	GCNGC	2 cut(s)	51, 112
GsaI	CCCAGC	1 cut(s)	1477
GsuI	CTGGAG	1 cut(s)	434
HaeII	RGCGCY	1 cut(s)	1414
HaeIII	GGCC	5 cut(s)	167, 266, 1247, 1472, 1649
HapII	CCGG	2 cut(s)	7, 128
HgaI	GACGC	1 cut(s)	1155
HhaI	GCGC	4 cut(s)	19, 116, 651, 1413
Hin1II	CATG	8 cut(s)	334, 649, 1001, 1309, 1674, 1703, 1769, 1792
Hin6I	GCGC	4 cut(s)	17, 114, 649, 1411
HinP1I	GCGC	4 cut(s)	17, 114, 649, 1411
HincII	GTYRAC	1 cut(s)	368
HindII	GTYRAC	1 cut(s)	368
HindIII	AAGCTT	1 cut(s)	961
HinfI	GANTC	4 cut(s)	315, 483, 1205, 1762
HpaII	CCGG	2 cut(s)	7, 128
HphI	GGTGA	4 cut(s)	745, 783, 1283, 1334
Hpy166II	GTNNAC	2 cut(s)	227, 368
Hpy188I	TCNGA	7 cut(s)	975, 1081, 1210, 1504, 1509, 1725, 1837
Hpy8I	GTNNAC	2 cut(s)	227, 368
Hpy99I	CGWCG	1 cut(s)	1655
HpyAV	CCTTC	8 cut(s)	171, 211, 215, 534, 834, 1227, 1551, 1633
HpyCH4III	ACNGT	6 cut(s)	196, 727, 1314, 1430, 1655, 1799
HpyCH4IV	ACGT	2 cut(s)	1185, 1197
HpyF10VI	GCNNNNNNNGC	5 cut(s)	16, 336, 1253, 1606, 1676
HpyF3I	CTNAG	7 cut(s)	624, 738, 974, 1080, 1107, 1142, 1201
HpySE526I	ACGT	2 cut(s)	1185, 1197
Hsp92II	CATG	8 cut(s)	334, 649, 1001, 1309, 1674, 1703, 1769, 1792
HspAI	GCGC	4 cut(s)	17, 114, 649, 1411
KroI	GCCGGC	1 cut(s)	6
KroNI	GCCGGC	1 cut(s)	8
Ksp22I	TGATCA	1 cut(s)	1749
Kzo9I	GATC	8 cut(s)	1000, 1076, 1102, 1324, 1504, 1543, 1702, 1749
LmnI	GCTCC	3 cut(s)	461, 552, 1307
LweI	GCATC	4 cut(s)	1243, 1551, 1596, 1768
MaeI	CTAG	6 cut(s)	272, 743, 780, 1263, 1281, 1422
MaeII	ACGT	2 cut(s)	1185, 1197
MaeIII	GTNAC	6 cut(s)	751, 815, 916, 1024, 1582, 1799
MalI	GATC	8 cut(s)	1002, 1078, 1104, 1326, 1506, 1545, 1704, 1751
MboI	GATC	8 cut(s)	1000, 1076, 1102, 1324, 1504, 1543, 1702, 1749
MflI	RGATCY	1 cut(s)	1076
MhlI	GDGCHC	3 cut(s)	466, 1435, 1474
MlsI	TGGCCA	1 cut(s)	266
MluNI	TGGCCA	1 cut(s)	266
MlyI	GAGTC	1 cut(s)	1214
MmeI	TCCRAC	4 cut(s)	130, 1394, 1467, 1715
Mox20I	TGGCCA	1 cut(s)	266
Mph1103I	ATGCAT	1 cut(s)	1611
MroNI	GCCGGC	1 cut(s)	6
MroXI	GAANNNNTTC	1 cut(s)	1622
MscI	TGGCCA	1 cut(s)	266
MseI	TTAA	6 cut(s)	335, 399, 677, 854, 876, 1849
MslI	CAYNNNNRTG	2 cut(s)	206, 1698
Msp20I	TGGCCA	1 cut(s)	266
MspI	CCGG	2 cut(s)	7, 128
MspR9I	CCNGG	2 cut(s)	1329, 1829
MvaI	CCWGG	2 cut(s)	1329, 1829
MvnI	CGCG	2 cut(s)	19, 114
MwoI	GCNNNNNNNGC	5 cut(s)	16, 336, 1253, 1606, 1676
NaeI	GCCGGC	1 cut(s)	8
NdeI	CATATG	3 cut(s)	809, 1318, 1611
NdeII	GATC	8 cut(s)	1000, 1076, 1102, 1324, 1504, 1543, 1702, 1749
NgoMIV	GCCGGC	1 cut(s)	6
NlaIII	CATG	8 cut(s)	334, 649, 1001, 1309, 1674, 1703, 1769, 1792
NlaIV	GGNNCC	4 cut(s)	291, 501, 1472, 1839
NmuCI	GTSAC	3 cut(s)	751, 815, 1582
NsiI	ATGCAT	1 cut(s)	1611
NspI	RCATGY	3 cut(s)	334, 649, 1674
PcsI	WCGNNNNNNNCGW	1 cut(s)	319
PdiI	GCCGGC	1 cut(s)	8
PdmI	GAANNNNTTC	1 cut(s)	1622
PfeI	GAWTC	3 cut(s)	315, 483, 1762
PflMI	CCANNNNNTGG	1 cut(s)	479
PkrI	GCNGC	2 cut(s)	52, 113
PleI	GAGTC	1 cut(s)	1213
PpsI	GAGTC	1 cut(s)	1213
Ppu21I	YACGTR	1 cut(s)	1186
PpuMI	RGGWCCY	1 cut(s)	500
PshBI	ATTAAT	1 cut(s)	399
Psp5II	RGGWCCY	1 cut(s)	500
Psp6I	CCWGG	2 cut(s)	1327, 1827
PspEI	GGTNACC	2 cut(s)	751, 1024
PspFI	CCCAGC	1 cut(s)	1473
PspGI	CCWGG	2 cut(s)	1327, 1827
PspN4I	GGNNCC	4 cut(s)	291, 501, 1472, 1839
PspOMI	GGGCCC	1 cut(s)	1470
PspPI	GGNCC	3 cut(s)	500, 1470, 1471
PspPPI	RGGWCCY	1 cut(s)	500
PstI	CTGCAG	1 cut(s)	766
PstNI	CAGNNNCTG	1 cut(s)	725
PsuI	RGATCY	1 cut(s)	1076
RsaI	GTAC	2 cut(s)	228, 1188
RsaNI	GTAC	2 cut(s)	227, 1187
RseI	CAYNNNNRTG	2 cut(s)	206, 1698
SaqAI	TTAA	6 cut(s)	335, 399, 677, 854, 876, 1849
SatI	GCNGC	2 cut(s)	51, 112
Sau3AI	GATC	8 cut(s)	1000, 1076, 1102, 1324, 1504, 1543, 1702, 1749
Sau96I	GGNCC	3 cut(s)	500, 1470, 1471
SchI	GAGTC	1 cut(s)	1214
ScrFI	CCNGG	2 cut(s)	1329, 1829
SduI	GDGCHC	3 cut(s)	466, 1435, 1474
SfaNI	GCATC	4 cut(s)	1243, 1551, 1596, 1768
SfcI	CTRYAG	1 cut(s)	762
SinI	GGWCC	1 cut(s)	500
SmiMI	CAYNNNNRTG	2 cut(s)	206, 1698
SpeI	ACTAGT	1 cut(s)	271
SsiI	CCGC	8 cut(s)	19, 25, 35, 50, 53, 112, 287, 1441
SspMI	CTAG	6 cut(s)	272, 743, 780, 1263, 1281, 1422
StyD4I	CCNGG	2 cut(s)	1327, 1827
StyI	CCWWGG	2 cut(s)	495, 1664
TaaI	ACNGT	6 cut(s)	196, 727, 1314, 1430, 1655, 1799
TaiI	ACGT	2 cut(s)	1188, 1200
TaqI	TCGA	4 cut(s)	206, 313, 322, 1685
TaqII	GACCGA	1 cut(s)	1569
TatI	WGTACW	1 cut(s)	226
TauI	GCSGC	2 cut(s)	53, 114
TfiI	GAWTC	3 cut(s)	315, 483, 1762
Tru1I	TTAA	6 cut(s)	335, 399, 677, 854, 876, 1849
Tru9I	TTAA	6 cut(s)	335, 399, 677, 854, 876, 1849
TscAI	CASTG	2 cut(s)	352, 417
TseFI	GTSAC	3 cut(s)	751, 815, 1582
Tsp45I	GTSAC	3 cut(s)	751, 815, 1582
TspDTI	ATGAA	2 cut(s)	819, 1805
TspGWI	ACGGA	1 cut(s)	922
TspRI	CASTG	2 cut(s)	352, 417
Van91I	CCANNNNNTGG	1 cut(s)	479
VpaK11BI	GGWCC	1 cut(s)	500
VspI	ATTAAT	1 cut(s)	399
XagI	CCTNNNNNAGG	1 cut(s)	1627
XapI	RAATTY	3 cut(s)	592, 770, 1016
XceI	RCATGY	3 cut(s)	334, 649, 1674
XcmI	CCANNNNNNNNNTGG	1 cut(s)	502
XmnI	GAANNNNTTC	1 cut(s)	1622
XspI	CTAG	6 cut(s)	272, 743, 780, 1263, 1281, 1422
Zsp2I	ATGCAT	1 cut(s)	1611

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.