Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0007130

Physical Location & Seq

Genomic Coordinates Forward (+)

23342149 .. 23352021

Gene Structure 9873 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000033103

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1887 bp

ATGTACGCTCGAACCGTCGGGAGTAACATGTGCCGGCAAGAATCGCAATCGCACGTGCGAATGTCGTCGGAGGAAGAAATCGCCGCCGAGGAGAGCCTCTCTATCTATTGCAAGCCTGTTGAGTTCTATAACATCCTCCAACGCCGTGCTATAAGAAATCCGGCTTTTCTTCAAAGATGTTTGAGCTACAAAAGAGAGGCCAAGCACAAAAAGAGAATACAAATGACAGTTTCAGTTTCGAGGAATGAGCGAGAAGGTGTACAGACTCAGAAGCTGTTTCCTTTGTATGTGTTTTTGGCGAGGCTAGTTCCTGATGTTGTGGCTCCAGAGTATAATGCTACATATCGATTCAGTCGAGCTTGCATGTTAAGCAATTCAACTGGGGTTGATGGGAGTGGTCAACATCAAGCAAATTTTATTCTGCCTGACATCAACAAGCTCGCATTGGAGGCTAAATCGGGCTCACTTGCCATTTTGCTTGTTAGCTTTGTGGGTGCACAAAATCCACTGCGTGGAATCAATTTGTCCAAGGGTCCAATGGATATGGCATCCTCTCCCGCAAATGTAGGAGGGTATTGCCTATGGAGCAAGATACCTCTGGAATTACTTTATATATCATGGGAGAGTTCTCCTAATTTTGGTTTGGGACAGAGAGCTGAGTTGATGTCGACTATTGACATGCAATCTTGCTTTTTGAAGTTAAGTTGTTCAAATGAGGACAAGTGCCTTATGATTGCAATTCCCTATAATCCAGAAACTGCTATCATATCCCAGCAAGTGCAGGTCAATATTTCTGCAGAGGAGCTTGGTGCCAGGGAAAAATCTCCTTATAATACATACATACGTAATGACATTCCTTCTTCATCGTTAGCTCATATCATTCGGTTAAGGGCAGGAAATGTGATTTTTAATTATAGATACTACAACAATACGTTGCAAAGGACAGAAGTGACTGAAGATTTTTCCTGTCCGTTTTGTTTGGTTAAATGTGCAAGCTTTAAGGGTCTGAAATATCATCTGCTCTCATCACATGATCTCTTCAACTTTGAATTTTGGGTAACTGAAGAGTGTCAAGCTGTAAACGTGTCTGTGAAAACTGACAATTGGACATCTGAGATTGTTGCTGATGGTGTTGATCCGAAGCTACAAGTATTCTTCTTTTGCTCAAAGCCGCTTAGACGAAGAAGACCCAAGAGCCTAAATCAAAATTCAAAGCATGTACATCCACACGTCTTACACTCGAGCTTACCTTCAGGACTCTGTGTGCTTTTGGACAAGGCCGATGATGCTCATTCTAGTAAGGGTGATAAGGCCAGGATATCAGGGGTTTCAAGTTCGATACCACAGTCATATGCTGATCCAGGTTGTGTTCAATCAATATCTGGAAACAATTTTGCACCTTCTCAAATGCTACTGTTTGCAAAGACAAGAAAATTATCAGTTGAACGCTCAGACCCTAGAAACTGTGCCCTCCTGCGGAAGCGACAATTCTTTCACTCACACAGAGCCCAGCCAATGACTTTGGAACAAGTTTTGTCCGATCAAGATAGTGAGGATGAGGTTGATGATGATGTTGCTGATTTTGAAGATCGCAGGATGCTTGATGATTTCGTTGATGTAACCAAAGATGAGAAGCAAATGATGCATATGTGGAACTCCTTCGTGAGAAAGCAACAGGTGTTGGCTGATGGCCACATTCCTTGGGCGTGTGAGGCATTTTCAAGATTGCATGCACATGAGCTTGTGCAATCCCCGGCCTTGATATGGTGTTGGAGATTATTTATGATCAAGTTGTGGAATCATGGTCTCCTGGATGCACGCAGTATGAACAACTGTAACATTATTCTTGAACAATACCCGAGCAAGGTTTTGGATCCGAAGAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006349 GO:0006355 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009889 GO:0009909 GO:0009910 GO:0009987 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0031490 GO:0034641 GO:0040029 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0048519 GO:0048580 GO:0048581 GO:0048831 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051171 GO:0051239 GO:0051241 GO:0051252 GO:0060255 GO:0065007 GO:0071514 GO:0071704 GO:0080090 GO:0097159 GO:0140110 GO:1901360 GO:1901363 GO:1903506 GO:2000026 GO:2000112 GO:2000241 GO:2000242 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

VEFS-Box

Protein Analysis

629

Amino Acids

71.33

Weight (kDa)

8.17

Isoelectric Point (pI)

54.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF7651	PF24663	62 - 272	9e-91	Domain of unknown function (DUF7651)
Zn_SUZ12	PF23320	299 - 367	8.9e-34	Polycomb protein SUZ12-like, Zn domain
VEFS-Box	PF09733	489 - 609	1.8e-55	VEFS-Box of polycomb protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007130)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G51230 AT5G51230 AT5G51230
fragaria_vesca	FvH4_3g17191
malus_domestica	MD03G1252500.v1.1 MD11G1274700.v1.1
prunus_persica	Prupe.4G152500_v2.0.a1 Prupe.4G152500_v2.0.a1 Prupe.4G152500_v2.0.a1 Prupe.4G152500_v2.0.a1 Prupe.4G152500_v2.0.a1
pyrus_communis	pycom03g20030 pycom11g24240
rosa_chinensis	RchiOBHm_Chr5g0028591
rosa_laevigata	RLG00000033102 RLG00000033103 RLG00000033104
rosa_multiflora	Rmu_sc0001575.1_g000016
rosa_roxburghii	Rroxscaffold_1G00051190
rosa_rugosa	Rorug05G0109700
rosa_samantha	Rh5AG201800 Rh5BG200000 Rh5CG220300 Rh5DG203200
rosa_wichuraiana	Rw5G018290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	831
Acc36I	ACCTGC	1 cut(s)	772
AccB1I	GGYRCC	1 cut(s)	809
AccB7I	CCANNNNNTGG	1 cut(s)	512
AccI	GTMKAC	1 cut(s)	668
AciI	CCGC	4 cut(s)	84, 558, 1172, 1477
AclWI	GGATC	4 cut(s)	1130, 1352, 1868, 1881
AcoI	YGGCCR	1 cut(s)	1690
AcsI	RAATTY	3 cut(s)	412, 1049, 1207
AcuI	CTGAAG	3 cut(s)	975, 1083, 1236
AcvI	CACGTG	1 cut(s)	55
AdeI	CACNNNGTG	1 cut(s)	512
AfaI	GTAC	3 cut(s)	5, 261, 1221
AfiI	CCNNNNNNNGG	5 cut(s)	512, 638, 1476, 1764, 1864
AflIII	ACRYGT	3 cut(s)	27, 1083, 1228
AjiI	CACGTC	1 cut(s)	1231
AjnI	CCWGG	4 cut(s)	812, 1313, 1360, 1809
Alw21I	GWGCWC	1 cut(s)	499
Alw26I	GTCTC	1 cut(s)	1811
Alw44I	GTGCAC	1 cut(s)	495
AlwI	GGATC	4 cut(s)	1130, 1352, 1868, 1881
AlwNI	CAGNNNCTG	2 cut(s)	274, 758
Ama87I	CYCGRG	2 cut(s)	1240, 1858
AoxI	GGCC	5 cut(s)	198, 1278, 1311, 1690, 1755
ApaLI	GTGCAC	1 cut(s)	495
ApoI	RAATTY	3 cut(s)	412, 1049, 1207
Asp700I	GAANNNNTTC	1 cut(s)	1658
AspS9I	GGNCC	1 cut(s)	533
AsuC2I	CCSGG	1 cut(s)	1754
AsuHPI	GGTGA	1 cut(s)	1316
AvaI	CYCGRG	2 cut(s)	1240, 1858
AvaII	GGWCC	1 cut(s)	533
BaeGI	GKGCMC	2 cut(s)	499, 1471
BaeI	ACNNNNGTAYC	2 cut(s)	1331, 1364
BalI	TGGCCA	1 cut(s)	1692
BamHI	GGATCC	1 cut(s)	1873
BanI	GGYRCC	1 cut(s)	809
BanII	GRGCYC	2 cut(s)	464, 1510
BbrPI	CACGTG	1 cut(s)	55
BbsI	GAAGAC	1 cut(s)	1192
Bbv12I	GWGCWC	1 cut(s)	499
BccI	CCATC	3 cut(s)	383, 1121, 1682
BceAI	ACGGC	1 cut(s)	129
BciT130I	CCWGG	4 cut(s)	814, 1315, 1362, 1811
BclI	TGATCA	1 cut(s)	1785
BcnI	CCSGG	1 cut(s)	1754
BcoDI	GTCTC	1 cut(s)	1811
BfaI	CTAG	3 cut(s)	305, 1296, 1458
BfmI	CTRYAG	1 cut(s)	795
BfuAI	ACCTGC	1 cut(s)	772
BisI	GCNGC	2 cut(s)	84, 1172
BlsI	GCNGC	2 cut(s)	85, 1173
Bme1390I	CCNGG	5 cut(s)	814, 1315, 1362, 1754, 1811
Bme18I	GGWCC	1 cut(s)	533
BmeT110I	CYCGRG	2 cut(s)	1240, 1858
BmgBI	CACGTC	1 cut(s)	1231
BmgT120I	GGNCC	1 cut(s)	533
BmiI	GGNNCC	4 cut(s)	324, 534, 811, 1875
BmrFI	CCNGG	5 cut(s)	814, 1315, 1362, 1754, 1811
BmrI	ACTGGG	1 cut(s)	390
BmsI	GCATC	5 cut(s)	557, 1276, 1587, 1632, 1804
BmuI	ACTGGG	1 cut(s)	390
BpiI	GAAGAC	1 cut(s)	1192
BplI	GAGNNNNNCTC	2 cut(s)	83, 115
BpmI	CTGGAG	1 cut(s)	309
BpuMI	CCSGG	1 cut(s)	1754
Bsa29I	ATCGAT	1 cut(s)	346
BsaAI	YACGTR	2 cut(s)	55, 845
BsaI	GGTCTC	1 cut(s)	1811
BsaJI	CCNNGG	5 cut(s)	87, 528, 813, 1700, 1752
Bsc4I	CCNNNNNNNGG	5 cut(s)	512, 638, 1476, 1764, 1864
Bse118I	RCCGGY	1 cut(s)	33
Bse1I	ACTGG	1 cut(s)	385
BseBI	CCWGG	4 cut(s)	814, 1315, 1362, 1811
BseCI	ATCGAT	1 cut(s)	346
BseDI	CCNNGG	5 cut(s)	87, 528, 813, 1700, 1752
BseGI	GGATG	6 cut(s)	132, 548, 1222, 1561, 1602, 1819
BseLI	CCNNNNNNNGG	5 cut(s)	512, 638, 1476, 1764, 1864
BseMII	CTCAG	4 cut(s)	281, 648, 1104, 1464
BseNI	ACTGG	1 cut(s)	385
BseRI	GAGGAG	2 cut(s)	104, 815
BseSI	GKGCMC	2 cut(s)	499, 1471
BseYI	CCCAGC	2 cut(s)	771, 1509
BsgI	GTGCAG	1 cut(s)	800
BshFI	GGCC	5 cut(s)	200, 1280, 1313, 1692, 1757
BshNI	GGYRCC	1 cut(s)	809
BshVI	ATCGAT	1 cut(s)	346
BsiHKAI	GWGCWC	1 cut(s)	499
BsiHKCI	CYCGRG	2 cut(s)	1240, 1858
BsiSI	CCGG	3 cut(s)	34, 161, 1754
BslFI	GGGAC	1 cut(s)	660
BslI	CCNNNNNNNGG	5 cut(s)	512, 638, 1476, 1764, 1864
BsmAI	GTCTC	1 cut(s)	1811
BsmFI	GGGAC	1 cut(s)	660
BsnI	GGCC	5 cut(s)	200, 1280, 1313, 1692, 1757
Bso31I	GGTCTC	1 cut(s)	1811
BsoBI	CYCGRG	2 cut(s)	1240, 1858
Bsp1286I	GDGCHC	4 cut(s)	464, 499, 1471, 1510
Bsp1407I	TGTACA	2 cut(s)	259, 1219
Bsp143I	GATC	7 cut(s)	1033, 1135, 1357, 1540, 1588, 1785, 1873
BspACI	CCGC	4 cut(s)	84, 558, 1172, 1477
BspANI	GGCC	5 cut(s)	200, 1280, 1313, 1692, 1757
BspCNI	CTCAG	4 cut(s)	280, 649, 1105, 1463
BspDI	ATCGAT	1 cut(s)	346
BspLI	GGNNCC	4 cut(s)	324, 534, 811, 1875
BspMAI	CTGCAG	1 cut(s)	799
BspMI	ACCTGC	1 cut(s)	772
BspPI	GGATC	4 cut(s)	1130, 1352, 1868, 1881
BspT107I	GGYRCC	1 cut(s)	809
BspTNI	GGTCTC	1 cut(s)	1811
BsrFI	RCCGGY	1 cut(s)	33
BsrGI	TGTACA	2 cut(s)	259, 1219
BsrI	ACTGG	1 cut(s)	385
BssAI	RCCGGY	1 cut(s)	33
BssECI	CCNNGG	5 cut(s)	87, 528, 813, 1700, 1752
BssMI	GATC	7 cut(s)	1033, 1135, 1357, 1540, 1588, 1785, 1873
BssT1I	CCWWGG	2 cut(s)	528, 1700
Bst2UI	CCWGG	4 cut(s)	814, 1315, 1362, 1811
Bst4CI	ACNGT	6 cut(s)	16, 229, 1347, 1416, 1466, 1835
Bst6I	CTCTTC	3 cut(s)	1043, 1059, 1874
BstAPI	GCANNNNNTGC	1 cut(s)	1642
BstAUI	TGTACA	2 cut(s)	259, 1219
BstBAI	YACGTR	2 cut(s)	55, 845
BstC8I	GCNNGC	7 cut(s)	35, 113, 361, 441, 994, 1731, 1819
BstDEI	CTNAG	5 cut(s)	267, 657, 1113, 1175, 1450
BstF5I	GGATG	6 cut(s)	132, 548, 1222, 1561, 1602, 1819
BstKTI	GATC	7 cut(s)	1036, 1138, 1360, 1543, 1591, 1788, 1876
BstMAI	GTCTC	1 cut(s)	1811
BstMBI	GATC	7 cut(s)	1033, 1135, 1357, 1540, 1588, 1785, 1873
BstMWI	GCNNNNNNNGC	7 cut(s)	43, 369, 449, 585, 1286, 1642, 1712
BstNI	CCWGG	4 cut(s)	814, 1315, 1362, 1811
BstNSI	RCATGY	5 cut(s)	31, 367, 682, 1220, 1733
BstSCI	CCNGG	5 cut(s)	812, 1313, 1360, 1752, 1809
BstSFI	CTRYAG	1 cut(s)	795
BstSLI	GKGCMC	2 cut(s)	499, 1471
BstSNI	TACGTA	1 cut(s)	845
BstV2I	GAAGAC	1 cut(s)	1192
BstX2I	RGATCY	1 cut(s)	1873
BstYI	RGATCY	1 cut(s)	1873
Bsu15I	ATCGAT	1 cut(s)	346
BsuRI	GGCC	5 cut(s)	200, 1280, 1313, 1692, 1757
BsuTUI	ATCGAT	1 cut(s)	346
BtrI	CACGTC	1 cut(s)	1231
BtsCI	GGATG	6 cut(s)	132, 548, 1222, 1561, 1602, 1819
BtsI	GCAGTG	1 cut(s)	506
BtsIMutI	CAGTG	1 cut(s)	506
BveI	ACCTGC	1 cut(s)	772
Cac8I	GCNNGC	7 cut(s)	35, 113, 361, 441, 994, 1731, 1819
CaiI	CAGNNNCTG	2 cut(s)	274, 758
Cfr10I	RCCGGY	1 cut(s)	33
Cfr13I	GGNCC	1 cut(s)	533
ClaI	ATCGAT	1 cut(s)	346
Csp6I	GTAC	3 cut(s)	4, 260, 1220
CspCI	CAANNNNNGTGG	2 cut(s)	1682, 1717
CviAII	CATG	9 cut(s)	28, 364, 618, 679, 1031, 1217, 1730, 1736, 1802
CviQI	GTAC	3 cut(s)	4, 260, 1220
DdeI	CTNAG	5 cut(s)	267, 657, 1113, 1175, 1450
DpnI	GATC	7 cut(s)	1035, 1137, 1359, 1542, 1590, 1787, 1875
DpnII	GATC	7 cut(s)	1033, 1135, 1357, 1540, 1588, 1785, 1873
DraIII	CACNNNGTG	1 cut(s)	512
EaeI	YGGCCR	1 cut(s)	1690
Eam1104I	CTCTTC	3 cut(s)	1043, 1059, 1874
EarI	CTCTTC	3 cut(s)	1043, 1059, 1874
Eco105I	TACGTA	1 cut(s)	845
Eco130I	CCWWGG	2 cut(s)	528, 1700
Eco24I	GRGCYC	2 cut(s)	464, 1510
Eco31I	GGTCTC	1 cut(s)	1811
Eco32I	GATATC	1 cut(s)	1320
Eco47I	GGWCC	1 cut(s)	533
Eco57I	CTGAAG	3 cut(s)	975, 1083, 1236
Eco72I	CACGTG	1 cut(s)	55
Eco88I	CYCGRG	2 cut(s)	1240, 1858
EcoRII	CCWGG	4 cut(s)	812, 1313, 1360, 1809
EcoRV	GATATC	1 cut(s)	1320
EcoT14I	CCWWGG	2 cut(s)	528, 1700
EcoT22I	ATGCAT	1 cut(s)	1647
EcoT38I	GRGCYC	2 cut(s)	464, 1510
ErhI	CCWWGG	2 cut(s)	528, 1700
FaeI	CATG	9 cut(s)	31, 367, 621, 682, 1034, 1220, 1733, 1739, 1805
FaqI	GGGAC	1 cut(s)	660
FatI	CATG	9 cut(s)	27, 363, 617, 678, 1030, 1216, 1729, 1735, 1801
FauI	CCCGC	1 cut(s)	565
FauNDI	CATATG	2 cut(s)	1351, 1647
FbaI	TGATCA	1 cut(s)	1785
FblI	GTMKAC	1 cut(s)	668
Fnu4HI	GCNGC	2 cut(s)	84, 1172
FokI	GGATG	6 cut(s)	119, 535, 1209, 1568, 1609, 1826
FriOI	GRGCYC	2 cut(s)	464, 1510
Fsp4HI	GCNGC	2 cut(s)	84, 1172
FspBI	CTAG	3 cut(s)	305, 1296, 1458
GluI	GCNGC	2 cut(s)	84, 1172
GsaI	CCCAGC	2 cut(s)	775, 1513
GsuI	CTGGAG	1 cut(s)	309
HaeIII	GGCC	5 cut(s)	200, 1280, 1313, 1692, 1757
HapII	CCGG	3 cut(s)	34, 161, 1754
Hin1II	CATG	9 cut(s)	31, 367, 621, 682, 1034, 1220, 1733, 1739, 1805
HincII	GTYRAC	2 cut(s)	401, 669
HindII	GTYRAC	2 cut(s)	401, 669
HindIII	AAGCTT	1 cut(s)	994
HinfI	GANTC	6 cut(s)	41, 265, 348, 516, 1257, 1798
HpaII	CCGG	3 cut(s)	34, 161, 1754
HphI	GGTGA	1 cut(s)	1316
Hpy166II	GTNNAC	5 cut(s)	260, 401, 497, 669, 1081
Hpy188I	TCNGA	8 cut(s)	70, 270, 1008, 1114, 1140, 1453, 1540, 1878
Hpy8I	GTNNAC	5 cut(s)	260, 401, 497, 669, 1081
Hpy99I	CGWCG	2 cut(s)	20, 70
HpyAV	CCTTC	5 cut(s)	248, 867, 1260, 1410, 1669
HpyCH4III	ACNGT	6 cut(s)	16, 229, 1347, 1416, 1466, 1835
HpyCH4IV	ACGT	5 cut(s)	54, 844, 932, 1083, 1230
HpyF10VI	GCNNNNNNNGC	7 cut(s)	43, 369, 449, 585, 1286, 1642, 1712
HpyF3I	CTNAG	5 cut(s)	267, 657, 1113, 1175, 1450
HpySE526I	ACGT	5 cut(s)	54, 844, 932, 1083, 1230
Hsp92II	CATG	9 cut(s)	31, 367, 621, 682, 1034, 1220, 1733, 1739, 1805
KroI	GCCGGC	1 cut(s)	33
KroNI	GCCGGC	1 cut(s)	35
Ksp22I	TGATCA	1 cut(s)	1785
Kzo9I	GATC	7 cut(s)	1033, 1135, 1357, 1540, 1588, 1785, 1873
LmnI	GCTCC	3 cut(s)	328, 585, 802
LweI	GCATC	5 cut(s)	557, 1276, 1587, 1632, 1804
MaeI	CTAG	3 cut(s)	305, 1296, 1458
MaeII	ACGT	5 cut(s)	54, 844, 932, 1083, 1230
MaeIII	GTNAC	5 cut(s)	23, 949, 1057, 1618, 1835
MalI	GATC	7 cut(s)	1035, 1137, 1359, 1542, 1590, 1787, 1875
MboI	GATC	7 cut(s)	1033, 1135, 1357, 1540, 1588, 1785, 1873
MfeI	CAATTG	1 cut(s)	1102
MflI	RGATCY	1 cut(s)	1873
MhlI	GDGCHC	4 cut(s)	464, 499, 1471, 1510
MlsI	TGGCCA	1 cut(s)	1692
MluNI	TGGCCA	1 cut(s)	1692
MlyI	GAGTC	2 cut(s)	259, 1251
MmeI	TCCRAC	3 cut(s)	48, 163, 1751
Mox20I	TGGCCA	1 cut(s)	1692
Mph1103I	ATGCAT	1 cut(s)	1647
MroNI	GCCGGC	1 cut(s)	33
MroXI	GAANNNNTTC	1 cut(s)	1658
MscI	TGGCCA	1 cut(s)	1692
MseI	TTAA	6 cut(s)	368, 701, 887, 909, 984, 999
MslI	CAYNNNNRTG	1 cut(s)	1734
Msp20I	TGGCCA	1 cut(s)	1692
MspI	CCGG	3 cut(s)	34, 161, 1754
MspR9I	CCNGG	5 cut(s)	814, 1315, 1362, 1754, 1811
MunI	CAATTG	1 cut(s)	1102
MvaI	CCWGG	4 cut(s)	814, 1315, 1362, 1811
MwoI	GCNNNNNNNGC	7 cut(s)	43, 369, 449, 585, 1286, 1642, 1712
NaeI	GCCGGC	1 cut(s)	35
NciI	CCSGG	1 cut(s)	1754
NdeI	CATATG	2 cut(s)	1351, 1647
NdeII	GATC	7 cut(s)	1033, 1135, 1357, 1540, 1588, 1785, 1873
NgoMIV	GCCGGC	1 cut(s)	33
NlaIII	CATG	9 cut(s)	31, 367, 621, 682, 1034, 1220, 1733, 1739, 1805
NlaIV	GGNNCC	4 cut(s)	324, 534, 811, 1875
NmeAIII	GCCGAG	1 cut(s)	112
NmuCI	GTSAC	1 cut(s)	949
NsiI	ATGCAT	1 cut(s)	1647
NspI	RCATGY	5 cut(s)	31, 367, 682, 1220, 1733
PaeI	GCATGC	1 cut(s)	1733
PaeR7I	CTCGAG	1 cut(s)	1240
PciI	ACATGT	1 cut(s)	27
PcsI	WCGNNNNNNNCGW	2 cut(s)	12, 352
PdiI	GCCGGC	1 cut(s)	35
PdmI	GAANNNNTTC	1 cut(s)	1658
PfeI	GAWTC	4 cut(s)	41, 348, 516, 1798
PflMI	CCANNNNNTGG	1 cut(s)	512
PfoI	TCCNGGA	1 cut(s)	1809
PkrI	GCNGC	2 cut(s)	85, 1173
PleI	GAGTC	2 cut(s)	259, 1251
PmaCI	CACGTG	1 cut(s)	55
PmlI	CACGTG	1 cut(s)	55
PpsI	GAGTC	2 cut(s)	259, 1251
Ppu21I	YACGTR	2 cut(s)	55, 845
PscI	ACATGT	1 cut(s)	27
PsiI	TTATAA	1 cut(s)	831
Psp6I	CCWGG	4 cut(s)	812, 1313, 1360, 1809
PspCI	CACGTG	1 cut(s)	55
PspFI	CCCAGC	2 cut(s)	771, 1509
PspGI	CCWGG	4 cut(s)	812, 1313, 1360, 1809
PspN4I	GGNNCC	4 cut(s)	324, 534, 811, 1875
PspPI	GGNCC	1 cut(s)	533
PspXI	VCTCGAGB	1 cut(s)	1240
PstI	CTGCAG	1 cut(s)	799
PstNI	CAGNNNCTG	2 cut(s)	274, 758
PsuI	RGATCY	1 cut(s)	1873
RsaI	GTAC	3 cut(s)	5, 261, 1221
RsaNI	GTAC	3 cut(s)	4, 260, 1220
RseI	CAYNNNNRTG	1 cut(s)	1734
SalI	GTCGAC	1 cut(s)	667
SaqAI	TTAA	6 cut(s)	368, 701, 887, 909, 984, 999
SatI	GCNGC	2 cut(s)	84, 1172
Sau3AI	GATC	7 cut(s)	1033, 1135, 1357, 1540, 1588, 1785, 1873
Sau96I	GGNCC	1 cut(s)	533
SchI	GAGTC	2 cut(s)	259, 1251
ScrFI	CCNGG	5 cut(s)	814, 1315, 1362, 1754, 1811
SduI	GDGCHC	4 cut(s)	464, 499, 1471, 1510
SfaNI	GCATC	5 cut(s)	557, 1276, 1587, 1632, 1804
SfcI	CTRYAG	1 cut(s)	795
Sfr274I	CTCGAG	1 cut(s)	1240
SinI	GGWCC	1 cut(s)	533
SlaI	CTCGAG	1 cut(s)	1240
SmiMI	CAYNNNNRTG	1 cut(s)	1734
SmlI	CTYRAG	1 cut(s)	1240
SmoI	CTYRAG	1 cut(s)	1240
SnaBI	TACGTA	1 cut(s)	845
SphI	GCATGC	1 cut(s)	1733
SsiI	CCGC	4 cut(s)	84, 558, 1172, 1477
SspI	AATATT	1 cut(s)	790
SspMI	CTAG	3 cut(s)	305, 1296, 1458
StyD4I	CCNGG	5 cut(s)	812, 1313, 1360, 1752, 1809
StyI	CCWWGG	2 cut(s)	528, 1700
TaaI	ACNGT	6 cut(s)	16, 229, 1347, 1416, 1466, 1835
TaiI	ACGT	5 cut(s)	57, 847, 935, 1086, 1233
TaqI	TCGA	7 cut(s)	10, 239, 346, 355, 668, 1241, 1337
TatI	WGTACW	2 cut(s)	259, 1219
TauI	GCSGC	2 cut(s)	86, 1174
TfiI	GAWTC	4 cut(s)	41, 348, 516, 1798
Tru1I	TTAA	6 cut(s)	368, 701, 887, 909, 984, 999
Tru9I	TTAA	6 cut(s)	368, 701, 887, 909, 984, 999
TscAI	CASTG	1 cut(s)	513
TseFI	GTSAC	1 cut(s)	949
Tsp45I	GTSAC	1 cut(s)	949
TspDTI	ATGAA	2 cut(s)	852, 1841
TspGWI	ACGGA	1 cut(s)	960
TspRI	CASTG	1 cut(s)	513
Van91I	CCANNNNNTGG	1 cut(s)	512
VneI	GTGCAC	1 cut(s)	495
VpaK11BI	GGWCC	1 cut(s)	533
XapI	RAATTY	3 cut(s)	412, 1049, 1207
XceI	RCATGY	5 cut(s)	31, 367, 682, 1220, 1733
XcmI	CCANNNNNNNNNTGG	1 cut(s)	535
XhoI	CTCGAG	1 cut(s)	1240
XmiI	GTMKAC	1 cut(s)	668
XmnI	GAANNNNTTC	1 cut(s)	1658
XspI	CTAG	3 cut(s)	305, 1296, 1458
Zsp2I	ATGCAT	1 cut(s)	1647

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.