Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0007130

Physical Location & Seq

Genomic Coordinates Reverse (-)

71828675 .. 71839105

Gene Structure 10431 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00051190.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1998 bp

ATGGTTTCCGGAAATGGAAGAAATGAAAATAGTAAGTTTCCAACTTGGGAAACTTCTATTTATACCAAAATGGAAATTCCTTCCAATGGTCATAACTTCCTCATACGAACTCGATTCTCGCGTTCTACATATCCACGAACTCGTATCGACGCGCTCTACAACTTTCGTGAAGGAAGTTTTCGGAGAATCCCAACCTATAAAAAGTACGCTCGAACCGTCGGGAGTAACATGTGCCGGCAAGAATCGCAATCGCACGTGCGAATGTCGTCGGAGGAAGAAATCGCCGCCGAGGAGAGCCTCTCTATCTATTGCAAGCCTGTTGAGTTCTATAACATCCTCCAGCGCCGTGCTATAAGAAATCCGGCTTTTCTTCAAAGATGTTTGAGCTACAAAAGGGAGGCCAAGCACAAAAAGAGAATACAGATGACAGTTTCAGTTTCGAGGAATGAGCGAGAAGGTGTACAAACTCAGAAGCTCTTTCCTTTGTATGTGTTTTTGGCGAGGCTAGTTCCTGATGTTGTGGCTCCAGAGTATAATGCTACATATCGATTCAGTCGAGCTTGCATGTTAAGCAATTCAACTGGGGTTGATGGGAGTGGTCAACATCAAGCAAATTTTATTCTGCCTGACATCAACAAGCTAGCATTGGAGGCTAAATCGGGCTCACTTGCCATTTTGCTTGTTAGCTTTGTGGGTGCACAAAATCCACTGCGTGGAATCAATTTGTCCAAGGGTCCAATGGATATGGCATCCTCTCCTGGAGGGTATTGCCTATGGAGCAAGATACCACTGGAATTACTTTATATATCATGGGAGAGTTCTCCTAATTTTGGTTTGGGACAGAGAGCTGAGTTGATGTCGACTATTGACATGCAATCTTGCTTTTTGAAGTTAAGTTGTTCAAATGAGGACAAGTGCCTTATGATTGCAATTCCCTATAATCCAGAAACTGCTATCATATCCCAGCAAGTGCAGGTCAATATTTCTGCAGAGGAGCTTGGTGCCAGGGAAAAATCTCCTTATAATACATACATACGTAATGACATTCCTTCTTCATCGTTAGCTCATATCATTCGGTTAAGGGCAGGAAATGTGATTTTTAATTATAGATACTACAACAATACGCTGCAAAGGACAGAAGTGACTGAAGATTTTTCTTGTCCGTTTTGTTTGGTTAAATGTGCAAGCTTTAAGGGTCTGAAATATCATCTGCTCTCATCACATGATCTCTTCAACTTTGAATTTTGGGTAACTGAAGAGTGTCAAGCTGTAAATGTGTCTGTGAAAACTGACAATTGGACATCTGAGATTGTTGCTGATGGTGTTGATCCTAAGCTACAAGTATTCTTCTTTTGCTCAAAGCCACTTAGACGAAGAAGACCCAAGTGCCTAAATCAAAATTCAAAGCATGTACATCCACATGTCTTACACTCGAGCTTACCTTCGGGACTCTGTGTGCTTTTGGACAAGGTCGATGATGCTCATTCTAGTAAGGGTGATAAGGCCAGGATATCAGGGGTTTCAAGTTCGATACCACAGTCATATGCTGATCCAGGTTGTGTTCAATCAATATCCGGAAACAATTTTGCACCTTCTCAAATGCTACTGTTTGCAAAGACAAGAAAATTATCAGTTGAACGCTCAGACCCTAGAAAAACATCAGTAACACTGTCAAAACCAAATCTTACATCGACAACATCTTTTCCTTGCACTTATAAGAAGTGTCAGTGGGCACTCCTTCCAATGACGTTGGAACAAGTTTTGTCCGATCAAGATAGTGAGGATGAGGTTGATGATGATGTTGCTGATTTTGAAGATCGCAGGATGCTTGATGATTTCGTTGATGTAACCAAAGATGAGAAGCAAATGATGCATATGTGGAACTCCTTCGTGAGAAAGCAACAGGTGTTGGCTGATGGCCACATTCCTTGGGCATGTGAGGCATTTTCAAGATTGCATGCACATGAGCTTGTGCAATCCCCGGCCTTGATATGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006349 GO:0006355 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009889 GO:0009909 GO:0009910 GO:0009987 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0031490 GO:0034641 GO:0040029 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0048519 GO:0048580 GO:0048581 GO:0048831 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051171 GO:0051239 GO:0051241 GO:0051252 GO:0060255 GO:0065007 GO:0071514 GO:0071704 GO:0080090 GO:0097159 GO:0140110 GO:1901360 GO:1901363 GO:1903506 GO:2000026 GO:2000112 GO:2000241 GO:2000242 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

VEFS-Box

Protein Analysis

665

Amino Acids

75.57

Weight (kDa)

8.69

Isoelectric Point (pI)

49.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF7651	PF24663	129 - 336	3.1e-89	Domain of unknown function (DUF7651)
Zn_SUZ12	PF23320	363 - 431	9.6e-34	Polycomb protein SUZ12-like, Zn domain
VEFS-Box	PF09733	579 - 664	3e-36	VEFS-Box of polycomb protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007130)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G51230 AT5G51230 AT5G51230
fragaria_vesca	FvH4_3g17191
malus_domestica	MD03G1252500.v1.1 MD11G1274700.v1.1
prunus_persica	Prupe.4G152500_v2.0.a1 Prupe.4G152500_v2.0.a1 Prupe.4G152500_v2.0.a1 Prupe.4G152500_v2.0.a1 Prupe.4G152500_v2.0.a1
pyrus_communis	pycom03g20030 pycom11g24240
rosa_chinensis	RchiOBHm_Chr5g0028591
rosa_laevigata	RLG00000033102 RLG00000033103 RLG00000033104
rosa_multiflora	Rmu_sc0001575.1_g000016
rosa_roxburghii	Rroxscaffold_1G00051190
rosa_rugosa	Rorug05G0109700
rosa_samantha	Rh5AG201800 Rh5BG200000 Rh5CG220300 Rh5DG203200
rosa_wichuraiana	Rw5G018290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1023, 1716
Acc36I	ACCTGC	1 cut(s)	964
AccB1I	GGYRCC	1 cut(s)	1001
AccB7I	CCANNNNNTGG	1 cut(s)	713
AccI	GTMKAC	1 cut(s)	860
AccII	CGCG	2 cut(s)	121, 152
AccIII	TCCGGA	2 cut(s)	8, 1574
AciI	CCGC	1 cut(s)	285
AclWI	GGATC	2 cut(s)	1322, 1544
AcoI	YGGCCR	1 cut(s)	1918
AcsI	RAATTY	4 cut(s)	75, 613, 1241, 1399
AcuI	CTGAAG	2 cut(s)	1167, 1275
AcvI	CACGTG	1 cut(s)	256
AdeI	CACNNNGTG	1 cut(s)	713
AfaI	GTAC	3 cut(s)	206, 462, 1413
AfiI	CCNNNNNNNGG	4 cut(s)	86, 713, 830, 1992
AflIII	ACRYGT	2 cut(s)	228, 1420
AjnI	CCWGG	4 cut(s)	757, 1004, 1505, 1552
Alw21I	GWGCWC	1 cut(s)	700
Alw44I	GTGCAC	1 cut(s)	696
AlwI	GGATC	2 cut(s)	1322, 1544
AlwNI	CAGNNNCTG	1 cut(s)	950
Ama87I	CYCGRG	1 cut(s)	1432
Aor13HI	TCCGGA	2 cut(s)	8, 1574
AoxI	GGCC	4 cut(s)	399, 1503, 1918, 1983
ApaLI	GTGCAC	1 cut(s)	696
ApeKI	GCWGC	1 cut(s)	1126
ApoI	RAATTY	4 cut(s)	75, 613, 1241, 1399
Asp700I	GAANNNNTTC	1 cut(s)	1886
AspLEI	GCGC	2 cut(s)	154, 345
AspS9I	GGNCC	1 cut(s)	734
AsuC2I	CCSGG	1 cut(s)	1982
AsuHPI	GGTGA	1 cut(s)	1508
AsuNHI	GCTAGC	1 cut(s)	640
AvaI	CYCGRG	1 cut(s)	1432
AvaII	GGWCC	1 cut(s)	734
BaeGI	GKGCMC	2 cut(s)	700, 1735
BaeI	ACNNNNGTAYC	2 cut(s)	1523, 1556
BalI	TGGCCA	1 cut(s)	1920
BanI	GGYRCC	1 cut(s)	1001
BanII	GRGCYC	1 cut(s)	665
BbrPI	CACGTG	1 cut(s)	256
BbsI	GAAGAC	1 cut(s)	1384
Bbv12I	GWGCWC	1 cut(s)	700
BbvI	GCAGC	1 cut(s)	1113
BccI	CCATC	3 cut(s)	584, 1313, 1910
BceAI	ACGGC	1 cut(s)	330
BciT130I	CCWGG	4 cut(s)	759, 1006, 1507, 1554
BcnI	CCSGG	1 cut(s)	1982
BfaI	CTAG	4 cut(s)	506, 641, 1488, 1650
BfmI	CTRYAG	1 cut(s)	987
BfoI	RGCGCY	1 cut(s)	346
BfuAI	ACCTGC	1 cut(s)	964
BisI	GCNGC	2 cut(s)	285, 1127
BlsI	GCNGC	2 cut(s)	286, 1128
Bme1390I	CCNGG	5 cut(s)	759, 1006, 1507, 1554, 1982
Bme18I	GGWCC	1 cut(s)	734
BmeT110I	CYCGRG	1 cut(s)	1432
BmgT120I	GGNCC	1 cut(s)	734
BmiI	GGNNCC	3 cut(s)	525, 735, 1003
BmrFI	CCNGG	5 cut(s)	759, 1006, 1507, 1554, 1982
BmrI	ACTGGG	1 cut(s)	591
BmsI	GCATC	4 cut(s)	758, 1468, 1815, 1860
BmtI	GCTAGC	1 cut(s)	644
BmuI	ACTGGG	1 cut(s)	591
BpiI	GAAGAC	1 cut(s)	1384
BplI	GAGNNNNNCTC	2 cut(s)	284, 316
BpmI	CTGGAG	3 cut(s)	323, 510, 780
Bpu10I	CCTNAGC	1 cut(s)	1332
BpuMI	CCSGG	1 cut(s)	1982
Bsa29I	ATCGAT	1 cut(s)	547
BsaAI	YACGTR	2 cut(s)	256, 1037
BsaJI	CCNNGG	5 cut(s)	288, 729, 1005, 1928, 1980
BsaWI	WCCGGW	2 cut(s)	8, 1574
Bsc4I	CCNNNNNNNGG	4 cut(s)	86, 713, 830, 1992
Bse118I	RCCGGY	1 cut(s)	234
Bse1I	ACTGG	2 cut(s)	586, 795
BseAI	TCCGGA	2 cut(s)	8, 1574
BseBI	CCWGG	4 cut(s)	759, 1006, 1507, 1554
BseCI	ATCGAT	1 cut(s)	547
BseDI	CCNNGG	5 cut(s)	288, 729, 1005, 1928, 1980
BseGI	GGATG	5 cut(s)	333, 749, 1414, 1789, 1830
BseLI	CCNNNNNNNGG	4 cut(s)	86, 713, 830, 1992
BseMII	CTCAG	4 cut(s)	482, 840, 1296, 1656
BseNI	ACTGG	2 cut(s)	586, 795
BseRI	GAGGAG	2 cut(s)	305, 1007
BseSI	GKGCMC	2 cut(s)	700, 1735
BseXI	GCAGC	1 cut(s)	1113
BseYI	CCCAGC	1 cut(s)	963
BsgI	GTGCAG	1 cut(s)	992
Bsh1236I	CGCG	2 cut(s)	121, 152
BshFI	GGCC	4 cut(s)	401, 1505, 1920, 1985
BshNI	GGYRCC	1 cut(s)	1001
BshVI	ATCGAT	1 cut(s)	547
BsiHKAI	GWGCWC	1 cut(s)	700
BsiHKCI	CYCGRG	1 cut(s)	1432
BsiSI	CCGG	5 cut(s)	9, 235, 362, 1575, 1982
BslFI	GGGAC	2 cut(s)	852, 1461
BslI	CCNNNNNNNGG	4 cut(s)	86, 713, 830, 1992
BsmFI	GGGAC	2 cut(s)	852, 1461
BsnI	GGCC	4 cut(s)	401, 1505, 1920, 1985
BsoBI	CYCGRG	1 cut(s)	1432
Bsp1286I	GDGCHC	3 cut(s)	665, 700, 1735
Bsp13I	TCCGGA	2 cut(s)	8, 1574
Bsp1407I	TGTACA	2 cut(s)	460, 1411
Bsp143I	GATC	5 cut(s)	1225, 1327, 1549, 1768, 1816
BspACI	CCGC	1 cut(s)	285
BspANI	GGCC	4 cut(s)	401, 1505, 1920, 1985
BspCNI	CTCAG	4 cut(s)	481, 841, 1297, 1655
BspDI	ATCGAT	1 cut(s)	547
BspEI	TCCGGA	2 cut(s)	8, 1574
BspFNI	CGCG	2 cut(s)	121, 152
BspLI	GGNNCC	3 cut(s)	525, 735, 1003
BspMAI	CTGCAG	1 cut(s)	991
BspMI	ACCTGC	1 cut(s)	964
BspOI	GCTAGC	1 cut(s)	644
BspPI	GGATC	2 cut(s)	1322, 1544
BspT107I	GGYRCC	1 cut(s)	1001
BsrFI	RCCGGY	1 cut(s)	234
BsrGI	TGTACA	2 cut(s)	460, 1411
BsrI	ACTGG	2 cut(s)	586, 795
BssAI	RCCGGY	1 cut(s)	234
BssECI	CCNNGG	5 cut(s)	288, 729, 1005, 1928, 1980
BssMI	GATC	5 cut(s)	1225, 1327, 1549, 1768, 1816
BssT1I	CCWWGG	2 cut(s)	729, 1928
Bst2UI	CCWGG	4 cut(s)	759, 1006, 1507, 1554
Bst4CI	ACNGT	5 cut(s)	217, 430, 1539, 1608, 1671
Bst6I	CTCTTC	2 cut(s)	1235, 1251
BstAPI	GCANNNNNTGC	1 cut(s)	1870
BstAUI	TGTACA	2 cut(s)	460, 1411
BstBAI	YACGTR	2 cut(s)	256, 1037
BstC8I	GCNNGC	6 cut(s)	236, 314, 562, 642, 1186, 1959
BstDEI	CTNAG	6 cut(s)	468, 849, 1305, 1332, 1367, 1642
BstF5I	GGATG	5 cut(s)	333, 749, 1414, 1789, 1830
BstFNI	CGCG	2 cut(s)	121, 152
BstH2I	RGCGCY	1 cut(s)	346
BstHHI	GCGC	2 cut(s)	154, 345
BstKTI	GATC	5 cut(s)	1228, 1330, 1552, 1771, 1819
BstMBI	GATC	5 cut(s)	1225, 1327, 1549, 1768, 1816
BstMWI	GCNNNNNNNGC	6 cut(s)	244, 570, 650, 777, 1870, 1940
BstNI	CCWGG	4 cut(s)	759, 1006, 1507, 1554
BstNSI	RCATGY	7 cut(s)	232, 568, 874, 1412, 1424, 1938, 1961
BstSCI	CCNGG	5 cut(s)	757, 1004, 1505, 1552, 1980
BstSFI	CTRYAG	1 cut(s)	987
BstSLI	GKGCMC	2 cut(s)	700, 1735
BstSNI	TACGTA	1 cut(s)	1037
BstUI	CGCG	2 cut(s)	121, 152
BstV1I	GCAGC	1 cut(s)	1113
BstV2I	GAAGAC	1 cut(s)	1384
Bsu15I	ATCGAT	1 cut(s)	547
BsuRI	GGCC	4 cut(s)	401, 1505, 1920, 1985
BsuTUI	ATCGAT	1 cut(s)	547
BtsCI	GGATG	5 cut(s)	333, 749, 1414, 1789, 1830
BtsI	GCAGTG	1 cut(s)	707
BtsIMutI	CAGTG	4 cut(s)	707, 788, 1667, 1733
BveI	ACCTGC	1 cut(s)	964
Cac8I	GCNNGC	6 cut(s)	236, 314, 562, 642, 1186, 1959
CaiI	CAGNNNCTG	1 cut(s)	950
CfoI	GCGC	2 cut(s)	154, 345
Cfr10I	RCCGGY	1 cut(s)	234
Cfr13I	GGNCC	1 cut(s)	734
ClaI	ATCGAT	1 cut(s)	547
CseI	GACGC	1 cut(s)	158
Csp6I	GTAC	3 cut(s)	205, 461, 1412
CspCI	CAANNNNNGTGG	2 cut(s)	1910, 1945
CviQI	GTAC	3 cut(s)	205, 461, 1412
DdeI	CTNAG	6 cut(s)	468, 849, 1305, 1332, 1367, 1642
DpnI	GATC	5 cut(s)	1227, 1329, 1551, 1770, 1818
DpnII	GATC	5 cut(s)	1225, 1327, 1549, 1768, 1816
DraIII	CACNNNGTG	1 cut(s)	713
EaeI	YGGCCR	1 cut(s)	1918
Eam1104I	CTCTTC	2 cut(s)	1235, 1251
EarI	CTCTTC	2 cut(s)	1235, 1251
Eco105I	TACGTA	1 cut(s)	1037
Eco130I	CCWWGG	2 cut(s)	729, 1928
Eco24I	GRGCYC	1 cut(s)	665
Eco32I	GATATC	1 cut(s)	1512
Eco47I	GGWCC	1 cut(s)	734
Eco57I	CTGAAG	2 cut(s)	1167, 1275
Eco72I	CACGTG	1 cut(s)	256
Eco88I	CYCGRG	1 cut(s)	1432
EcoRII	CCWGG	4 cut(s)	757, 1004, 1505, 1552
EcoRV	GATATC	1 cut(s)	1512
EcoT14I	CCWWGG	2 cut(s)	729, 1928
EcoT22I	ATGCAT	1 cut(s)	1875
EcoT38I	GRGCYC	1 cut(s)	665
ErhI	CCWWGG	2 cut(s)	729, 1928
FaqI	GGGAC	2 cut(s)	852, 1461
FauNDI	CATATG	2 cut(s)	1543, 1875
FblI	GTMKAC	1 cut(s)	860
Fnu4HI	GCNGC	2 cut(s)	285, 1127
FokI	GGATG	5 cut(s)	320, 736, 1401, 1796, 1837
FriOI	GRGCYC	1 cut(s)	665
Fsp4HI	GCNGC	2 cut(s)	285, 1127
FspBI	CTAG	4 cut(s)	506, 641, 1488, 1650
GlaI	GCGC	2 cut(s)	153, 344
GluI	GCNGC	2 cut(s)	285, 1127
GsaI	CCCAGC	1 cut(s)	967
GsuI	CTGGAG	3 cut(s)	323, 510, 780
HaeII	RGCGCY	1 cut(s)	346
HaeIII	GGCC	4 cut(s)	401, 1505, 1920, 1985
HapII	CCGG	5 cut(s)	9, 235, 362, 1575, 1982
HgaI	GACGC	1 cut(s)	158
HhaI	GCGC	2 cut(s)	154, 345
Hin6I	GCGC	2 cut(s)	152, 343
HinP1I	GCGC	2 cut(s)	152, 343
HincII	GTYRAC	2 cut(s)	602, 861
HindII	GTYRAC	2 cut(s)	602, 861
HindIII	AAGCTT	1 cut(s)	1186
HinfI	GANTC	6 cut(s)	114, 186, 242, 549, 717, 1449
HpaII	CCGG	5 cut(s)	9, 235, 362, 1575, 1982
HphI	GGTGA	1 cut(s)	1508
Hpy166II	GTNNAC	4 cut(s)	461, 602, 698, 861
Hpy188I	TCNGA	7 cut(s)	183, 271, 471, 1200, 1306, 1645, 1768
Hpy8I	GTNNAC	4 cut(s)	461, 602, 698, 861
Hpy99I	CGWCG	3 cut(s)	152, 221, 271
HpyAV	CCTTC	8 cut(s)	90, 164, 449, 1059, 1452, 1602, 1748, 1897
HpyCH4III	ACNGT	5 cut(s)	217, 430, 1539, 1608, 1671
HpyCH4IV	ACGT	3 cut(s)	255, 1036, 1748
HpyF10VI	GCNNNNNNNGC	6 cut(s)	244, 570, 650, 777, 1870, 1940
HpyF3I	CTNAG	6 cut(s)	468, 849, 1305, 1332, 1367, 1642
HpySE526I	ACGT	3 cut(s)	255, 1036, 1748
HspAI	GCGC	2 cut(s)	152, 343
Kpn2I	TCCGGA	2 cut(s)	8, 1574
KroI	GCCGGC	1 cut(s)	234
KroNI	GCCGGC	1 cut(s)	236
Kzo9I	GATC	5 cut(s)	1225, 1327, 1549, 1768, 1816
LmnI	GCTCC	3 cut(s)	529, 777, 994
Lsp1109I	GCAGC	1 cut(s)	1113
LweI	GCATC	4 cut(s)	758, 1468, 1815, 1860
MaeI	CTAG	4 cut(s)	506, 641, 1488, 1650
MaeII	ACGT	3 cut(s)	255, 1036, 1748
MaeIII	GTNAC	5 cut(s)	224, 1141, 1249, 1663, 1846
MalI	GATC	5 cut(s)	1227, 1329, 1551, 1770, 1818
MboI	GATC	5 cut(s)	1225, 1327, 1549, 1768, 1816
MfeI	CAATTG	1 cut(s)	1294
MhlI	GDGCHC	3 cut(s)	665, 700, 1735
MlsI	TGGCCA	1 cut(s)	1920
MluNI	TGGCCA	1 cut(s)	1920
MlyI	GAGTC	1 cut(s)	1443
MmeI	TCCRAC	3 cut(s)	65, 249, 1731
Mox20I	TGGCCA	1 cut(s)	1920
Mph1103I	ATGCAT	1 cut(s)	1875
MroI	TCCGGA	2 cut(s)	8, 1574
MroNI	GCCGGC	1 cut(s)	234
MroXI	GAANNNNTTC	1 cut(s)	1886
MscI	TGGCCA	1 cut(s)	1920
MseI	TTAA	6 cut(s)	569, 893, 1079, 1101, 1176, 1191
MslI	CAYNNNNRTG	2 cut(s)	1419, 1962
Msp20I	TGGCCA	1 cut(s)	1920
MspI	CCGG	5 cut(s)	9, 235, 362, 1575, 1982
MspR9I	CCNGG	5 cut(s)	759, 1006, 1507, 1554, 1982
MunI	CAATTG	1 cut(s)	1294
MvaI	CCWGG	4 cut(s)	759, 1006, 1507, 1554
MvnI	CGCG	2 cut(s)	121, 152
MwoI	GCNNNNNNNGC	6 cut(s)	244, 570, 650, 777, 1870, 1940
NaeI	GCCGGC	1 cut(s)	236
NciI	CCSGG	1 cut(s)	1982
NdeI	CATATG	2 cut(s)	1543, 1875
NdeII	GATC	5 cut(s)	1225, 1327, 1549, 1768, 1816
NgoMIV	GCCGGC	1 cut(s)	234
NheI	GCTAGC	1 cut(s)	640
NlaIV	GGNNCC	3 cut(s)	525, 735, 1003
NmeAIII	GCCGAG	1 cut(s)	313
NmuCI	GTSAC	1 cut(s)	1141
NsiI	ATGCAT	1 cut(s)	1875
NspI	RCATGY	7 cut(s)	232, 568, 874, 1412, 1424, 1938, 1961
PaeI	GCATGC	1 cut(s)	1961
PaeR7I	CTCGAG	1 cut(s)	1432
PciI	ACATGT	2 cut(s)	228, 1420
PcsI	WCGNNNNNNNCGW	3 cut(s)	118, 213, 553
PdiI	GCCGGC	1 cut(s)	236
PdmI	GAANNNNTTC	1 cut(s)	1886
PfeI	GAWTC	5 cut(s)	114, 186, 242, 549, 717
PflFI	GACNNNGTC	1 cut(s)	1469
PflMI	CCANNNNNTGG	1 cut(s)	713
PfoI	TCCNGGA	1 cut(s)	757
PkrI	GCNGC	2 cut(s)	286, 1128
PleI	GAGTC	1 cut(s)	1443
PmaCI	CACGTG	1 cut(s)	256
PmlI	CACGTG	1 cut(s)	256
PpsI	GAGTC	1 cut(s)	1443
Ppu21I	YACGTR	2 cut(s)	256, 1037
PscI	ACATGT	2 cut(s)	228, 1420
PsiI	TTATAA	2 cut(s)	1023, 1716
Psp6I	CCWGG	4 cut(s)	757, 1004, 1505, 1552
PspCI	CACGTG	1 cut(s)	256
PspFI	CCCAGC	1 cut(s)	963
PspGI	CCWGG	4 cut(s)	757, 1004, 1505, 1552
PspN4I	GGNNCC	3 cut(s)	525, 735, 1003
PspPI	GGNCC	1 cut(s)	734
PspXI	VCTCGAGB	1 cut(s)	1432
PstI	CTGCAG	1 cut(s)	991
PstNI	CAGNNNCTG	1 cut(s)	950
PsyI	GACNNNGTC	1 cut(s)	1469
RsaI	GTAC	3 cut(s)	206, 462, 1413
RsaNI	GTAC	3 cut(s)	205, 461, 1412
RseI	CAYNNNNRTG	2 cut(s)	1419, 1962
SalI	GTCGAC	1 cut(s)	859
SaqAI	TTAA	6 cut(s)	569, 893, 1079, 1101, 1176, 1191
SatI	GCNGC	2 cut(s)	285, 1127
Sau3AI	GATC	5 cut(s)	1225, 1327, 1549, 1768, 1816
Sau96I	GGNCC	1 cut(s)	734
SchI	GAGTC	1 cut(s)	1443
ScrFI	CCNGG	5 cut(s)	759, 1006, 1507, 1554, 1982
SduI	GDGCHC	3 cut(s)	665, 700, 1735
SfaNI	GCATC	4 cut(s)	758, 1468, 1815, 1860
SfcI	CTRYAG	1 cut(s)	987
Sfr274I	CTCGAG	1 cut(s)	1432
SinI	GGWCC	1 cut(s)	734
SlaI	CTCGAG	1 cut(s)	1432
SmiMI	CAYNNNNRTG	2 cut(s)	1419, 1962
SmlI	CTYRAG	1 cut(s)	1432
SmoI	CTYRAG	1 cut(s)	1432
SnaBI	TACGTA	1 cut(s)	1037
SphI	GCATGC	1 cut(s)	1961
SsiI	CCGC	1 cut(s)	285
SspI	AATATT	1 cut(s)	982
SspMI	CTAG	4 cut(s)	506, 641, 1488, 1650
StyD4I	CCNGG	5 cut(s)	757, 1004, 1505, 1552, 1980
StyI	CCWWGG	2 cut(s)	729, 1928
TaaI	ACNGT	5 cut(s)	217, 430, 1539, 1608, 1671
TaiI	ACGT	3 cut(s)	258, 1039, 1751
TatI	WGTACW	2 cut(s)	460, 1411
TauI	GCSGC	1 cut(s)	287
TfiI	GAWTC	5 cut(s)	114, 186, 242, 549, 717
Tru1I	TTAA	6 cut(s)	569, 893, 1079, 1101, 1176, 1191
Tru9I	TTAA	6 cut(s)	569, 893, 1079, 1101, 1176, 1191
TscAI	CASTG	4 cut(s)	714, 795, 1674, 1733
TseFI	GTSAC	1 cut(s)	1141
TseI	GCWGC	1 cut(s)	1126
Tsp45I	GTSAC	1 cut(s)	1141
TspDTI	ATGAA	2 cut(s)	39, 1044
TspGWI	ACGGA	1 cut(s)	1152
TspRI	CASTG	4 cut(s)	714, 795, 1674, 1733
Tth111I	GACNNNGTC	1 cut(s)	1469
Van91I	CCANNNNNTGG	1 cut(s)	713
VneI	GTGCAC	1 cut(s)	696
VpaK11BI	GGWCC	1 cut(s)	734
XapI	RAATTY	4 cut(s)	75, 613, 1241, 1399
XceI	RCATGY	7 cut(s)	232, 568, 874, 1412, 1424, 1938, 1961
XcmI	CCANNNNNNNNNTGG	1 cut(s)	736
XhoI	CTCGAG	1 cut(s)	1432
XmiI	GTMKAC	1 cut(s)	860
XmnI	GAANNNNTTC	1 cut(s)	1886
XspI	CTAG	4 cut(s)	506, 641, 1488, 1650
Zsp2I	ATGCAT	1 cut(s)	1875

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.