Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0007130

Physical Location & Seq

Genomic Coordinates Forward (+)

22319325 .. 22329470

Gene Structure 10146 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG200000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1860 bp

ATGTGCCGGCAAGAATCGCAATCGCACGTGCGAATGTCGTCGGAGGAAGAAATCGCCGCCGAGGAGAGCCTCTCTATCTATTGCAAGCCTGTTGAGTTCTATAACATCCTCCAACGCCGTGCTATAAGAAATCCGGCTTTTCTTCAAAGATGTTTGAGCTACAAAAGAGAGGCCAAGCACAAAAAGAGAATACAAATGACAGTTTCAGTTTCGAGGAATGAGCGAGAAGGCGTACAAACTCAGAAGCTCTTTCCTTTGTATGTGTTTTTGGCGAGACTAGTTCCTGATGTTGTGGCTCCAGAGTATAATGCTACATATCGATTCAGTCGAGCTTGCATGTTAAGCAATTCAACTGGGGTTGATGGGAGTGGTCAACATCAAGCAAATTTTATTCTGCCTGACATCAACAAGCTCGCATTGGAGGCTAAATCGGGCTCACTTGCCATTTTGCTTGTTAGCTTTGTGGGTGCACAAAATCCACTGCGTGGAATCAATTTGTCCAAGGGTCCAATGGATATGGCATCCTCTCCTGCAAATGTAGGAGGGTATTGCCTATGGAGCAAGATACCACTGGAGTTACTTTATATATCGTGGGAGAGTTCTCCTAATTTTGGTTTGGGACAGAGAGCTGAGTTGATGTCGACTATTGACATGCAATCTTGCTTTTTGAAGTTAAGTTGTTCAAATGAGGACAAGTGCCTTATGATTGCAATTCCCTATAATCCAGAAACTGCTATCATATCCCAGCAAGTGCAGGTCAATATTTCTGCAGAGGAGCTTGGTGCCAGGGAAAAATCTCCTTATAATACATACATACGTAATGACATTCCTTCTTCATCGTTAGCTCATATCATTCGGTTAAGGGCAGGAAATGTGATTTTTAATTATAGATACTACAACAATACGTTGCAAAGGACAGAAGTGACTGAAGATTTTTCCTGTCCGTTTTGTTTGGTTAAATGTGCAAGCTTTAAGGGTCTGAAATATCATCTGCTCTCATCACATGATCTCTTCAACTTTGAATTTTGGGTAACTGAAGAGTGTCAAGCTGTAAACGTGTCTGTGAAAACTGACAATTGGACATCTGAGATTGTTGCTGATGGTGTTGATCCGAAGCTACAAGTATTCTTCTTTTGCTCAAAGCCACTTAGACGAAGAAGACCCAAGAGCCTAAATCAAAATTCAAAGCATGTACATCCACACGTCTTACACTCGAGCTTACCTTCAGGACTCTGTGTGCTTTTGGACAAGGCCGATGATGCTCATTCTAGTAAGGGTGATAAGGCCAGGATATCAGGGGTTTCAAGTTCGATACCACAGTCATATGCTGATCCAGGTTGTGTTCAATCAATATCTGGAAACAATTTTGCACCTTCTCAAATGCTACTGTTTGCAAAGACAAGAAAATTGTCAGTTGAACGCTCAGACCCTAGAAACTGTGCCCTCCTGCGGAAGCGACAATTCTTTCACTCACATAGAGCCCAGCCAATGACGTTGGAACAAGTTTTGTCCGATCAAGATAGTGAGGATGAGGTTGATGATGATGTTGCTGATTTTGAAGATCGCAGGATGCTTGATGATTTCGTTGATGTAACCAAAGATGAGAAGCAAATGATGCATATGTGGAACTCCTTCGTGAGAAAGCAACAGGTGTTGGCTGATGGCCACATTCCTTGGGCGTGTGAGGCATTTTCAAGATTGCATGCACATGAGCTTGTGCAATCCCCGGCCTTGATATGGTGTTGGAGATTATTTATGATCAAGTTGTGGAATCATGGTCTCCTGGATGCACGCAGTATGAACAACTGTAACATTATTCTTGAACAATATCCGAGCAAGGTTTTGGATCCGAAGAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006349 GO:0006355 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009889 GO:0009909 GO:0009910 GO:0009987 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0031490 GO:0034641 GO:0040029 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0048519 GO:0048580 GO:0048581 GO:0048831 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051171 GO:0051239 GO:0051241 GO:0051252 GO:0060255 GO:0065007 GO:0071514 GO:0071704 GO:0080090 GO:0097159 GO:0140110 GO:1901360 GO:1901363 GO:1903506 GO:2000026 GO:2000112 GO:2000241 GO:2000242 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

VEFS-Box

Protein Analysis

619

Amino Acids

70.35

Weight (kDa)

8.01

Isoelectric Point (pI)

54.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF7651	PF24663	53 - 263	8.7e-91	Domain of unknown function (DUF7651)
Zn_SUZ12	PF23320	290 - 358	8.7e-34	Polycomb protein SUZ12-like, Zn domain
VEFS-Box	PF09733	480 - 600	1.7e-55	VEFS-Box of polycomb protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007130)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G51230 AT5G51230 AT5G51230
fragaria_vesca	FvH4_3g17191
malus_domestica	MD03G1252500.v1.1 MD11G1274700.v1.1
prunus_persica	Prupe.4G152500_v2.0.a1 Prupe.4G152500_v2.0.a1 Prupe.4G152500_v2.0.a1 Prupe.4G152500_v2.0.a1 Prupe.4G152500_v2.0.a1
pyrus_communis	pycom03g20030 pycom11g24240
rosa_chinensis	RchiOBHm_Chr5g0028591
rosa_laevigata	RLG00000033102 RLG00000033103 RLG00000033104
rosa_multiflora	Rmu_sc0001575.1_g000016
rosa_roxburghii	Rroxscaffold_1G00051190
rosa_rugosa	Rorug05G0109700
rosa_samantha	Rh5AG201800 Rh5BG200000 Rh5CG220300 Rh5DG203200
rosa_wichuraiana	Rw5G018290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	804
Acc36I	ACCTGC	1 cut(s)	745
AccB1I	GGYRCC	1 cut(s)	782
AccB7I	CCANNNNNTGG	1 cut(s)	485
AccI	GTMKAC	1 cut(s)	641
AciI	CCGC	2 cut(s)	57, 1450
AclWI	GGATC	4 cut(s)	1103, 1325, 1841, 1854
AcoI	YGGCCR	1 cut(s)	1663
AcsI	RAATTY	3 cut(s)	385, 1022, 1180
AcuI	CTGAAG	3 cut(s)	948, 1056, 1209
AcvI	CACGTG	1 cut(s)	28
AdeI	CACNNNGTG	1 cut(s)	485
AfaI	GTAC	2 cut(s)	234, 1194
AfiI	CCNNNNNNNGG	4 cut(s)	485, 611, 1449, 1737
AflIII	ACRYGT	2 cut(s)	1056, 1201
AhlI	ACTAGT	1 cut(s)	277
AjiI	CACGTC	1 cut(s)	1204
AjnI	CCWGG	4 cut(s)	785, 1286, 1333, 1782
Alw21I	GWGCWC	1 cut(s)	472
Alw26I	GTCTC	2 cut(s)	268, 1784
Alw44I	GTGCAC	1 cut(s)	468
AlwI	GGATC	4 cut(s)	1103, 1325, 1841, 1854
AlwNI	CAGNNNCTG	1 cut(s)	731
Ama87I	CYCGRG	1 cut(s)	1213
AoxI	GGCC	5 cut(s)	171, 1251, 1284, 1663, 1728
ApaLI	GTGCAC	1 cut(s)	468
ApoI	RAATTY	3 cut(s)	385, 1022, 1180
Asp700I	GAANNNNTTC	1 cut(s)	1631
AspS9I	GGNCC	1 cut(s)	506
AsuC2I	CCSGG	1 cut(s)	1727
AsuHPI	GGTGA	1 cut(s)	1289
AvaI	CYCGRG	1 cut(s)	1213
AvaII	GGWCC	1 cut(s)	506
BaeGI	GKGCMC	2 cut(s)	472, 1444
BaeI	ACNNNNGTAYC	2 cut(s)	1304, 1337
BalI	TGGCCA	1 cut(s)	1665
BamHI	GGATCC	1 cut(s)	1846
BanI	GGYRCC	1 cut(s)	782
BanII	GRGCYC	2 cut(s)	437, 1483
BbrPI	CACGTG	1 cut(s)	28
BbsI	GAAGAC	1 cut(s)	1165
Bbv12I	GWGCWC	1 cut(s)	472
BccI	CCATC	3 cut(s)	356, 1094, 1655
BceAI	ACGGC	1 cut(s)	102
BciT130I	CCWGG	4 cut(s)	787, 1288, 1335, 1784
BclI	TGATCA	1 cut(s)	1758
BcnI	CCSGG	1 cut(s)	1727
BcoDI	GTCTC	2 cut(s)	268, 1784
BcuI	ACTAGT	1 cut(s)	277
BfaI	CTAG	3 cut(s)	278, 1269, 1431
BfmI	CTRYAG	1 cut(s)	768
BfuAI	ACCTGC	1 cut(s)	745
BisI	GCNGC	1 cut(s)	57
BlsI	GCNGC	1 cut(s)	58
Bme1390I	CCNGG	5 cut(s)	787, 1288, 1335, 1727, 1784
Bme18I	GGWCC	1 cut(s)	506
BmeT110I	CYCGRG	1 cut(s)	1213
BmgBI	CACGTC	1 cut(s)	1204
BmgT120I	GGNCC	1 cut(s)	506
BmiI	GGNNCC	4 cut(s)	297, 507, 784, 1848
BmrFI	CCNGG	5 cut(s)	787, 1288, 1335, 1727, 1784
BmrI	ACTGGG	1 cut(s)	363
BmsI	GCATC	5 cut(s)	530, 1249, 1560, 1605, 1777
BmuI	ACTGGG	1 cut(s)	363
BpiI	GAAGAC	1 cut(s)	1165
BplI	GAGNNNNNCTC	2 cut(s)	56, 88
BpmI	CTGGAG	2 cut(s)	282, 593
BpuMI	CCSGG	1 cut(s)	1727
Bsa29I	ATCGAT	1 cut(s)	319
BsaAI	YACGTR	2 cut(s)	28, 818
BsaI	GGTCTC	1 cut(s)	1784
BsaJI	CCNNGG	5 cut(s)	60, 501, 786, 1673, 1725
Bsc4I	CCNNNNNNNGG	4 cut(s)	485, 611, 1449, 1737
Bse118I	RCCGGY	1 cut(s)	6
Bse1I	ACTGG	2 cut(s)	358, 576
BseBI	CCWGG	4 cut(s)	787, 1288, 1335, 1784
BseCI	ATCGAT	1 cut(s)	319
BseDI	CCNNGG	5 cut(s)	60, 501, 786, 1673, 1725
BseGI	GGATG	6 cut(s)	105, 521, 1195, 1534, 1575, 1792
BseLI	CCNNNNNNNGG	4 cut(s)	485, 611, 1449, 1737
BseMII	CTCAG	4 cut(s)	254, 621, 1077, 1437
BseNI	ACTGG	2 cut(s)	358, 576
BseRI	GAGGAG	2 cut(s)	77, 788
BseSI	GKGCMC	2 cut(s)	472, 1444
BseYI	CCCAGC	2 cut(s)	744, 1482
BsgI	GTGCAG	1 cut(s)	773
BshFI	GGCC	5 cut(s)	173, 1253, 1286, 1665, 1730
BshNI	GGYRCC	1 cut(s)	782
BshVI	ATCGAT	1 cut(s)	319
BsiHKAI	GWGCWC	1 cut(s)	472
BsiHKCI	CYCGRG	1 cut(s)	1213
BsiSI	CCGG	3 cut(s)	7, 134, 1727
BslFI	GGGAC	1 cut(s)	633
BslI	CCNNNNNNNGG	4 cut(s)	485, 611, 1449, 1737
BsmAI	GTCTC	2 cut(s)	268, 1784
BsmFI	GGGAC	1 cut(s)	633
BsnI	GGCC	5 cut(s)	173, 1253, 1286, 1665, 1730
Bso31I	GGTCTC	1 cut(s)	1784
BsoBI	CYCGRG	1 cut(s)	1213
Bsp1286I	GDGCHC	4 cut(s)	437, 472, 1444, 1483
Bsp1407I	TGTACA	1 cut(s)	1192
Bsp143I	GATC	7 cut(s)	1006, 1108, 1330, 1513, 1561, 1758, 1846
BspACI	CCGC	2 cut(s)	57, 1450
BspANI	GGCC	5 cut(s)	173, 1253, 1286, 1665, 1730
BspCNI	CTCAG	4 cut(s)	253, 622, 1078, 1436
BspDI	ATCGAT	1 cut(s)	319
BspLI	GGNNCC	4 cut(s)	297, 507, 784, 1848
BspMAI	CTGCAG	1 cut(s)	772
BspMI	ACCTGC	1 cut(s)	745
BspPI	GGATC	4 cut(s)	1103, 1325, 1841, 1854
BspT107I	GGYRCC	1 cut(s)	782
BspTNI	GGTCTC	1 cut(s)	1784
BsrFI	RCCGGY	1 cut(s)	6
BsrGI	TGTACA	1 cut(s)	1192
BsrI	ACTGG	2 cut(s)	358, 576
BssAI	RCCGGY	1 cut(s)	6
BssECI	CCNNGG	5 cut(s)	60, 501, 786, 1673, 1725
BssMI	GATC	7 cut(s)	1006, 1108, 1330, 1513, 1561, 1758, 1846
BssT1I	CCWWGG	2 cut(s)	501, 1673
Bst2UI	CCWGG	4 cut(s)	787, 1288, 1335, 1784
Bst4CI	ACNGT	5 cut(s)	202, 1320, 1389, 1439, 1808
Bst6I	CTCTTC	3 cut(s)	1016, 1032, 1847
BstAPI	GCANNNNNTGC	1 cut(s)	1615
BstAUI	TGTACA	1 cut(s)	1192
BstBAI	YACGTR	2 cut(s)	28, 818
BstC8I	GCNNGC	7 cut(s)	8, 86, 334, 414, 967, 1704, 1792
BstDEI	CTNAG	5 cut(s)	240, 630, 1086, 1148, 1423
BstF5I	GGATG	6 cut(s)	105, 521, 1195, 1534, 1575, 1792
BstKTI	GATC	7 cut(s)	1009, 1111, 1333, 1516, 1564, 1761, 1849
BstMAI	GTCTC	2 cut(s)	268, 1784
BstMBI	GATC	7 cut(s)	1006, 1108, 1330, 1513, 1561, 1758, 1846
BstMWI	GCNNNNNNNGC	7 cut(s)	16, 342, 422, 558, 1259, 1615, 1685
BstNI	CCWGG	4 cut(s)	787, 1288, 1335, 1784
BstNSI	RCATGY	4 cut(s)	340, 655, 1193, 1706
BstSCI	CCNGG	5 cut(s)	785, 1286, 1333, 1725, 1782
BstSFI	CTRYAG	1 cut(s)	768
BstSLI	GKGCMC	2 cut(s)	472, 1444
BstSNI	TACGTA	1 cut(s)	818
BstV2I	GAAGAC	1 cut(s)	1165
BstX2I	RGATCY	1 cut(s)	1846
BstYI	RGATCY	1 cut(s)	1846
Bsu15I	ATCGAT	1 cut(s)	319
BsuRI	GGCC	5 cut(s)	173, 1253, 1286, 1665, 1730
BsuTUI	ATCGAT	1 cut(s)	319
BtrI	CACGTC	1 cut(s)	1204
BtsCI	GGATG	6 cut(s)	105, 521, 1195, 1534, 1575, 1792
BtsI	GCAGTG	1 cut(s)	479
BtsIMutI	CAGTG	2 cut(s)	479, 569
BveI	ACCTGC	1 cut(s)	745
Cac8I	GCNNGC	7 cut(s)	8, 86, 334, 414, 967, 1704, 1792
CaiI	CAGNNNCTG	1 cut(s)	731
Cfr10I	RCCGGY	1 cut(s)	6
Cfr13I	GGNCC	1 cut(s)	506
ClaI	ATCGAT	1 cut(s)	319
Csp6I	GTAC	2 cut(s)	233, 1193
CspCI	CAANNNNNGTGG	2 cut(s)	1655, 1690
CviAII	CATG	7 cut(s)	337, 652, 1004, 1190, 1703, 1709, 1775
CviQI	GTAC	2 cut(s)	233, 1193
DdeI	CTNAG	5 cut(s)	240, 630, 1086, 1148, 1423
DpnI	GATC	7 cut(s)	1008, 1110, 1332, 1515, 1563, 1760, 1848
DpnII	GATC	7 cut(s)	1006, 1108, 1330, 1513, 1561, 1758, 1846
DraIII	CACNNNGTG	1 cut(s)	485
EaeI	YGGCCR	1 cut(s)	1663
Eam1104I	CTCTTC	3 cut(s)	1016, 1032, 1847
EarI	CTCTTC	3 cut(s)	1016, 1032, 1847
Eco105I	TACGTA	1 cut(s)	818
Eco130I	CCWWGG	2 cut(s)	501, 1673
Eco24I	GRGCYC	2 cut(s)	437, 1483
Eco31I	GGTCTC	1 cut(s)	1784
Eco32I	GATATC	1 cut(s)	1293
Eco47I	GGWCC	1 cut(s)	506
Eco57I	CTGAAG	3 cut(s)	948, 1056, 1209
Eco72I	CACGTG	1 cut(s)	28
Eco88I	CYCGRG	1 cut(s)	1213
EcoRII	CCWGG	4 cut(s)	785, 1286, 1333, 1782
EcoRV	GATATC	1 cut(s)	1293
EcoT14I	CCWWGG	2 cut(s)	501, 1673
EcoT22I	ATGCAT	1 cut(s)	1620
EcoT38I	GRGCYC	2 cut(s)	437, 1483
ErhI	CCWWGG	2 cut(s)	501, 1673
FaeI	CATG	7 cut(s)	340, 655, 1007, 1193, 1706, 1712, 1778
FaqI	GGGAC	1 cut(s)	633
FatI	CATG	7 cut(s)	336, 651, 1003, 1189, 1702, 1708, 1774
FauNDI	CATATG	2 cut(s)	1324, 1620
FbaI	TGATCA	1 cut(s)	1758
FblI	GTMKAC	1 cut(s)	641
Fnu4HI	GCNGC	1 cut(s)	57
FokI	GGATG	6 cut(s)	92, 508, 1182, 1541, 1582, 1799
FriOI	GRGCYC	2 cut(s)	437, 1483
Fsp4HI	GCNGC	1 cut(s)	57
FspBI	CTAG	3 cut(s)	278, 1269, 1431
GluI	GCNGC	1 cut(s)	57
GsaI	CCCAGC	2 cut(s)	748, 1486
GsuI	CTGGAG	2 cut(s)	282, 593
HaeIII	GGCC	5 cut(s)	173, 1253, 1286, 1665, 1730
HapII	CCGG	3 cut(s)	7, 134, 1727
Hin1II	CATG	7 cut(s)	340, 655, 1007, 1193, 1706, 1712, 1778
HincII	GTYRAC	2 cut(s)	374, 642
HindII	GTYRAC	2 cut(s)	374, 642
HindIII	AAGCTT	1 cut(s)	967
HinfI	GANTC	5 cut(s)	14, 321, 489, 1230, 1771
HpaII	CCGG	3 cut(s)	7, 134, 1727
HphI	GGTGA	1 cut(s)	1289
Hpy166II	GTNNAC	4 cut(s)	374, 470, 642, 1054
Hpy188I	TCNGA	9 cut(s)	43, 243, 981, 1087, 1113, 1426, 1513, 1833, 1851
Hpy188III	TCNNGA	9 cut(s)	284, 299, 725, 1227, 1356, 1517, 1636, 1695, 1820
Hpy8I	GTNNAC	4 cut(s)	374, 470, 642, 1054
Hpy99I	CGWCG	1 cut(s)	43
HpyAV	CCTTC	5 cut(s)	221, 840, 1233, 1383, 1642
HpyCH4III	ACNGT	5 cut(s)	202, 1320, 1389, 1439, 1808
HpyCH4IV	ACGT	6 cut(s)	27, 817, 905, 1056, 1203, 1493
HpyF10VI	GCNNNNNNNGC	7 cut(s)	16, 342, 422, 558, 1259, 1615, 1685
HpyF3I	CTNAG	5 cut(s)	240, 630, 1086, 1148, 1423
HpySE526I	ACGT	6 cut(s)	27, 817, 905, 1056, 1203, 1493
Hsp92II	CATG	7 cut(s)	340, 655, 1007, 1193, 1706, 1712, 1778
KroI	GCCGGC	1 cut(s)	6
KroNI	GCCGGC	1 cut(s)	8
Ksp22I	TGATCA	1 cut(s)	1758
Kzo9I	GATC	7 cut(s)	1006, 1108, 1330, 1513, 1561, 1758, 1846
LmnI	GCTCC	3 cut(s)	301, 558, 775
LweI	GCATC	5 cut(s)	530, 1249, 1560, 1605, 1777
MaeI	CTAG	3 cut(s)	278, 1269, 1431
MaeII	ACGT	6 cut(s)	27, 817, 905, 1056, 1203, 1493
MaeIII	GTNAC	5 cut(s)	576, 922, 1030, 1591, 1808
MalI	GATC	7 cut(s)	1008, 1110, 1332, 1515, 1563, 1760, 1848
MboI	GATC	7 cut(s)	1006, 1108, 1330, 1513, 1561, 1758, 1846
MfeI	CAATTG	1 cut(s)	1075
MflI	RGATCY	1 cut(s)	1846
MhlI	GDGCHC	4 cut(s)	437, 472, 1444, 1483
MlsI	TGGCCA	1 cut(s)	1665
MluNI	TGGCCA	1 cut(s)	1665
MlyI	GAGTC	1 cut(s)	1224
MmeI	TCCRAC	4 cut(s)	21, 136, 1476, 1724
Mox20I	TGGCCA	1 cut(s)	1665
Mph1103I	ATGCAT	1 cut(s)	1620
MroNI	GCCGGC	1 cut(s)	6
MroXI	GAANNNNTTC	1 cut(s)	1631
MscI	TGGCCA	1 cut(s)	1665
MseI	TTAA	6 cut(s)	341, 674, 860, 882, 957, 972
MslI	CAYNNNNRTG	1 cut(s)	1707
Msp20I	TGGCCA	1 cut(s)	1665
MspI	CCGG	3 cut(s)	7, 134, 1727
MspR9I	CCNGG	5 cut(s)	787, 1288, 1335, 1727, 1784
MunI	CAATTG	1 cut(s)	1075
MvaI	CCWGG	4 cut(s)	787, 1288, 1335, 1784
MwoI	GCNNNNNNNGC	7 cut(s)	16, 342, 422, 558, 1259, 1615, 1685
NaeI	GCCGGC	1 cut(s)	8
NciI	CCSGG	1 cut(s)	1727
NdeI	CATATG	2 cut(s)	1324, 1620
NdeII	GATC	7 cut(s)	1006, 1108, 1330, 1513, 1561, 1758, 1846
NgoMIV	GCCGGC	1 cut(s)	6
NlaIII	CATG	7 cut(s)	340, 655, 1007, 1193, 1706, 1712, 1778
NlaIV	GGNNCC	4 cut(s)	297, 507, 784, 1848
NmeAIII	GCCGAG	1 cut(s)	85
NmuCI	GTSAC	1 cut(s)	922
NsiI	ATGCAT	1 cut(s)	1620
NspI	RCATGY	4 cut(s)	340, 655, 1193, 1706
PaeI	GCATGC	1 cut(s)	1706
PaeR7I	CTCGAG	1 cut(s)	1213
PcsI	WCGNNNNNNNCGW	1 cut(s)	325
PdiI	GCCGGC	1 cut(s)	8
PdmI	GAANNNNTTC	1 cut(s)	1631
PfeI	GAWTC	4 cut(s)	14, 321, 489, 1771
PflMI	CCANNNNNTGG	1 cut(s)	485
PfoI	TCCNGGA	1 cut(s)	1782
PkrI	GCNGC	1 cut(s)	58
PleI	GAGTC	1 cut(s)	1224
PmaCI	CACGTG	1 cut(s)	28
PmlI	CACGTG	1 cut(s)	28
PpsI	GAGTC	1 cut(s)	1224
Ppu21I	YACGTR	2 cut(s)	28, 818
PsiI	TTATAA	1 cut(s)	804
Psp6I	CCWGG	4 cut(s)	785, 1286, 1333, 1782
PspCI	CACGTG	1 cut(s)	28
PspFI	CCCAGC	2 cut(s)	744, 1482
PspGI	CCWGG	4 cut(s)	785, 1286, 1333, 1782
PspN4I	GGNNCC	4 cut(s)	297, 507, 784, 1848
PspPI	GGNCC	1 cut(s)	506
PspXI	VCTCGAGB	1 cut(s)	1213
PstI	CTGCAG	1 cut(s)	772
PstNI	CAGNNNCTG	1 cut(s)	731
PsuI	RGATCY	1 cut(s)	1846
RsaI	GTAC	2 cut(s)	234, 1194
RsaNI	GTAC	2 cut(s)	233, 1193
RseI	CAYNNNNRTG	1 cut(s)	1707
SalI	GTCGAC	1 cut(s)	640
SaqAI	TTAA	6 cut(s)	341, 674, 860, 882, 957, 972
SatI	GCNGC	1 cut(s)	57
Sau3AI	GATC	7 cut(s)	1006, 1108, 1330, 1513, 1561, 1758, 1846
Sau96I	GGNCC	1 cut(s)	506
SchI	GAGTC	1 cut(s)	1224
ScrFI	CCNGG	5 cut(s)	787, 1288, 1335, 1727, 1784
SduI	GDGCHC	4 cut(s)	437, 472, 1444, 1483
SfaNI	GCATC	5 cut(s)	530, 1249, 1560, 1605, 1777
SfcI	CTRYAG	1 cut(s)	768
Sfr274I	CTCGAG	1 cut(s)	1213
SinI	GGWCC	1 cut(s)	506
SlaI	CTCGAG	1 cut(s)	1213
SmiMI	CAYNNNNRTG	1 cut(s)	1707
SmlI	CTYRAG	1 cut(s)	1213
SmoI	CTYRAG	1 cut(s)	1213
SnaBI	TACGTA	1 cut(s)	818
SpeI	ACTAGT	1 cut(s)	277
SphI	GCATGC	1 cut(s)	1706
SsiI	CCGC	2 cut(s)	57, 1450
SspI	AATATT	1 cut(s)	763
SspMI	CTAG	3 cut(s)	278, 1269, 1431
StyD4I	CCNGG	5 cut(s)	785, 1286, 1333, 1725, 1782
StyI	CCWWGG	2 cut(s)	501, 1673
TaaI	ACNGT	5 cut(s)	202, 1320, 1389, 1439, 1808
TaiI	ACGT	6 cut(s)	30, 820, 908, 1059, 1206, 1496
TaqI	TCGA	6 cut(s)	212, 319, 328, 641, 1214, 1310
TatI	WGTACW	1 cut(s)	1192
TauI	GCSGC	1 cut(s)	59
TfiI	GAWTC	4 cut(s)	14, 321, 489, 1771
Tru1I	TTAA	6 cut(s)	341, 674, 860, 882, 957, 972
Tru9I	TTAA	6 cut(s)	341, 674, 860, 882, 957, 972
TscAI	CASTG	2 cut(s)	486, 576
TseFI	GTSAC	1 cut(s)	922
Tsp45I	GTSAC	1 cut(s)	922
TspDTI	ATGAA	2 cut(s)	825, 1814
TspGWI	ACGGA	1 cut(s)	933
TspRI	CASTG	2 cut(s)	486, 576
Van91I	CCANNNNNTGG	1 cut(s)	485
VneI	GTGCAC	1 cut(s)	468
VpaK11BI	GGWCC	1 cut(s)	506
XapI	RAATTY	3 cut(s)	385, 1022, 1180
XceI	RCATGY	4 cut(s)	340, 655, 1193, 1706
XcmI	CCANNNNNNNNNTGG	1 cut(s)	508
XhoI	CTCGAG	1 cut(s)	1213
XmiI	GTMKAC	1 cut(s)	641
XmnI	GAANNNNTTC	1 cut(s)	1631
XspI	CTAG	3 cut(s)	278, 1269, 1431
Zsp2I	ATGCAT	1 cut(s)	1620

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.