Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001575.1

Orthogroup ID

OG0007130

Physical Location & Seq

Genomic Coordinates Forward (+)

98213 .. 108318

Gene Structure 10106 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001575.1_g000016.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1995 bp

atggcagctttacaaagcctctccgaaccaaagacgcagaagaagcacaaaccccaatccacccaactttctcatcttcatcttcagcttcaattccacctcctggctccgtacgctcgaaccgtcgggagtaacatgtgccggcaagaatcgcaatcgcacgtgcgaatgtcgtcggaggaagaaatcgccgccgaggagagcctctctatctattgcaagcctgttgagttctataacatcctccaacgccgcgctataagaaatccggcttttcttcaaagatgtttgagctacaaaagggaggccaagcacaaaaagagaatacaaatgacagtttcagtttcgaggaatgagcgagaaggtgtacaaactcagaagctctttcctttgtatgtgtttttggcgagactagttcctgatgttgtggctccagagtataatgctacatatcgattcagtcgagcttgcatgttaagcaattcaactggggttgatgggagtggtcaacatcaagcaaattttattctgcctgacatcaacaagctcgcattggaggctaaatcgggctcacttgccattttgcttgttagctttgtgggtgcacaaaatccactgcgtggaatcaatttgtccaagggtccaatggatatggcatcctctcctgcaaatgtaggagggtattgcctatggagcaagataccactggagttactttatatatcgtgggagagttctcctaattttggtttgggacagagagctgagttgatgtcgactattgacatgcaatcttgctttttgaagttaagttgttcaaatgaggacaagtgccttatgattgcaattccctataatccagaaactgctatcatatcccagcaagtgcaggtcaatatttctgcagaggagcttggtgccagggaaaaatctccttataatacatacatacgtaatgacattccttcttcatcgttagctcatatcattcggttaagggcaggaaatgtgatttttaattatagatactacaacaatacgttgcaaaggacagaagtgactgaagatttttcctgtccgttttgtttggttaaatgtgcaagctttaagggtctgaaatatcatctgctctcatcacatgatctcttcaactttgaattttgggtaactgaagagtgtcaagctgtaaacgtgtctgtgaaaactgacaattggacatctgagattgttgctgatggtgttgatccgaagctacaagtattcttcttttgctcaaagccacttagacgaagaagacccaagagcctaaatcaaaattcaaagcatgtacatccacacgtcttacactcgagcttaccttcaggactctgtgtgcttttggacaaggccgatgatgctcattctagtaagggtgataaggccaggatatcaggggtttcaagttcgataccacagtcatatgctgatccaggttgtgttcaatcaatatctggaaacaattttgcaccttctcaaatgctactgtttgcaaagacaagaaaattgtcagttgaacgctcagaccctagaaactgtgccctcctgcggaagcgacaattctttcactcacatagagcccagccaatgacgttggaacaagttttgtccgatcaagatagtgaggatgaggttgatgatgatgttgctgattttgaagatcgcaggatgcttgatgatttcgttgatgtaaccaaagatgagaagcaaatgatgcatatgtggaactccttcgtgagaaagcaacaggtgttggctgatggccacattccttgggcgtgtgaggcattttcaagattgcatgcacatgagcttgtgcaatccccggccttgatatggtgttggagattatttatgatcaagttgtggaatcatggtctcctggatgcacgcagtatgaacaactgtaacattattcttgaacaatatccgagcaaggttttggatccgaagagttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006349 GO:0006355 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009889 GO:0009909 GO:0009910 GO:0009987 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0031490 GO:0034641 GO:0040029 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0048519 GO:0048580 GO:0048581 GO:0048831 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051171 GO:0051239 GO:0051241 GO:0051252 GO:0060255 GO:0065007 GO:0071514 GO:0071704 GO:0080090 GO:0097159 GO:0140110 GO:1901360 GO:1901363 GO:1903506 GO:2000026 GO:2000112 GO:2000241 GO:2000242 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

VEFS-Box

Protein Analysis

664

Amino Acids

75.39

Weight (kDa)

8.49

Isoelectric Point (pI)

55.43

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007130)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G51230 AT5G51230 AT5G51230
fragaria_vesca	FvH4_3g17191
malus_domestica	MD03G1252500.v1.1 MD11G1274700.v1.1
prunus_persica	Prupe.4G152500_v2.0.a1 Prupe.4G152500_v2.0.a1 Prupe.4G152500_v2.0.a1 Prupe.4G152500_v2.0.a1 Prupe.4G152500_v2.0.a1
pyrus_communis	pycom03g20030 pycom11g24240
rosa_chinensis	RchiOBHm_Chr5g0028591
rosa_laevigata	RLG00000033102 RLG00000033103 RLG00000033104
rosa_multiflora	Rmu_sc0001575.1_g000016
rosa_roxburghii	Rroxscaffold_1G00051190
rosa_rugosa	Rorug05G0109700
rosa_samantha	Rh5AG201800 Rh5BG200000 Rh5CG220300 Rh5DG203200
rosa_wichuraiana	Rw5G018290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	939
Acc36I	ACCTGC	1 cut(s)	880
AccB1I	GGYRCC	1 cut(s)	917
AccB7I	CCANNNNNTGG	2 cut(s)	103, 620
AccI	GTMKAC	1 cut(s)	776
AccII	CGCG	1 cut(s)	255
AciI	CCGC	3 cut(s)	192, 253, 1585
AclWI	GGATC	4 cut(s)	1238, 1460, 1976, 1989
AcoI	YGGCCR	1 cut(s)	1798
AcsI	RAATTY	3 cut(s)	520, 1157, 1315
AcuI	CTGAAG	4 cut(s)	68, 1083, 1191, 1344
AcvI	CACGTG	1 cut(s)	163
AdeI	CACNNNGTG	1 cut(s)	620
AfaI	GTAC	3 cut(s)	113, 369, 1329
AfiI	CCNNNNNNNGG	5 cut(s)	103, 620, 746, 1584, 1872
AflIII	ACRYGT	3 cut(s)	135, 1191, 1336
AhlI	ACTAGT	1 cut(s)	412
AjiI	CACGTC	1 cut(s)	1339
AjnI	CCWGG	5 cut(s)	102, 920, 1421, 1468, 1917
Alw21I	GWGCWC	1 cut(s)	607
Alw26I	GTCTC	2 cut(s)	403, 1919
Alw44I	GTGCAC	1 cut(s)	603
AlwI	GGATC	4 cut(s)	1238, 1460, 1976, 1989
AlwNI	CAGNNNCTG	1 cut(s)	866
Ama87I	CYCGRG	1 cut(s)	1348
AoxI	GGCC	5 cut(s)	306, 1386, 1419, 1798, 1863
ApaLI	GTGCAC	1 cut(s)	603
ApeKI	GCWGC	1 cut(s)	5
ApoI	RAATTY	3 cut(s)	520, 1157, 1315
Asp700I	GAANNNNTTC	1 cut(s)	1766
AspLEI	GCGC	1 cut(s)	257
AspS9I	GGNCC	1 cut(s)	641
AsuC2I	CCSGG	1 cut(s)	1862
AsuHPI	GGTGA	1 cut(s)	1424
AvaI	CYCGRG	1 cut(s)	1348
AvaII	GGWCC	1 cut(s)	641
BaeGI	GKGCMC	2 cut(s)	607, 1579
BaeI	ACNNNNGTAYC	2 cut(s)	1439, 1472
BalI	TGGCCA	1 cut(s)	1800
BamHI	GGATCC	1 cut(s)	1981
BanI	GGYRCC	1 cut(s)	917
BanII	GRGCYC	2 cut(s)	572, 1618
BbrPI	CACGTG	1 cut(s)	163
BbsI	GAAGAC	1 cut(s)	1300
Bbv12I	GWGCWC	1 cut(s)	607
BbvI	GCAGC	1 cut(s)	17
BccI	CCATC	3 cut(s)	491, 1229, 1790
BciT130I	CCWGG	5 cut(s)	104, 922, 1423, 1470, 1919
BclI	TGATCA	1 cut(s)	1893
BcnI	CCSGG	1 cut(s)	1862
BcoDI	GTCTC	2 cut(s)	403, 1919
BcuI	ACTAGT	1 cut(s)	412
BfaI	CTAG	3 cut(s)	413, 1404, 1566
BfmI	CTRYAG	1 cut(s)	903
BfuAI	ACCTGC	1 cut(s)	880
BisI	GCNGC	3 cut(s)	6, 192, 253
BlsI	GCNGC	3 cut(s)	7, 193, 254
Bme1390I	CCNGG	6 cut(s)	104, 922, 1423, 1470, 1862, 1919
Bme18I	GGWCC	1 cut(s)	641
BmeT110I	CYCGRG	1 cut(s)	1348
BmgBI	CACGTC	1 cut(s)	1339
BmgT120I	GGNCC	1 cut(s)	641
BmiI	GGNNCC	5 cut(s)	108, 432, 642, 919, 1983
BmrFI	CCNGG	6 cut(s)	104, 922, 1423, 1470, 1862, 1919
BmrI	ACTGGG	1 cut(s)	498
BmsI	GCATC	5 cut(s)	665, 1384, 1695, 1740, 1912
BmuI	ACTGGG	1 cut(s)	498
BpiI	GAAGAC	1 cut(s)	1300
BplI	GAGNNNNNCTC	2 cut(s)	191, 223
BpmI	CTGGAG	2 cut(s)	417, 728
BpuMI	CCSGG	1 cut(s)	1862
Bsa29I	ATCGAT	1 cut(s)	454
BsaAI	YACGTR	2 cut(s)	163, 953
BsaI	GGTCTC	1 cut(s)	1919
BsaJI	CCNNGG	5 cut(s)	195, 636, 921, 1808, 1860
Bsc4I	CCNNNNNNNGG	5 cut(s)	103, 620, 746, 1584, 1872
Bse118I	RCCGGY	1 cut(s)	141
Bse1I	ACTGG	2 cut(s)	493, 711
BseBI	CCWGG	5 cut(s)	104, 922, 1423, 1470, 1919
BseCI	ATCGAT	1 cut(s)	454
BseDI	CCNNGG	5 cut(s)	195, 636, 921, 1808, 1860
BseGI	GGATG	6 cut(s)	240, 656, 1330, 1669, 1710, 1927
BseLI	CCNNNNNNNGG	5 cut(s)	103, 620, 746, 1584, 1872
BseMII	CTCAG	4 cut(s)	389, 756, 1212, 1572
BseNI	ACTGG	2 cut(s)	493, 711
BseRI	GAGGAG	2 cut(s)	212, 923
BseSI	GKGCMC	2 cut(s)	607, 1579
BseXI	GCAGC	1 cut(s)	17
BseYI	CCCAGC	2 cut(s)	879, 1617
BsgI	GTGCAG	1 cut(s)	908
Bsh1236I	CGCG	1 cut(s)	255
BshFI	GGCC	5 cut(s)	308, 1388, 1421, 1800, 1865
BshNI	GGYRCC	1 cut(s)	917
BshVI	ATCGAT	1 cut(s)	454
BsiHKAI	GWGCWC	1 cut(s)	607
BsiHKCI	CYCGRG	1 cut(s)	1348
BsiSI	CCGG	3 cut(s)	142, 269, 1862
BsiWI	CGTACG	1 cut(s)	111
BslFI	GGGAC	1 cut(s)	768
BslI	CCNNNNNNNGG	5 cut(s)	103, 620, 746, 1584, 1872
BsmAI	GTCTC	2 cut(s)	403, 1919
BsmFI	GGGAC	1 cut(s)	768
BsnI	GGCC	5 cut(s)	308, 1388, 1421, 1800, 1865
Bso31I	GGTCTC	1 cut(s)	1919
BsoBI	CYCGRG	1 cut(s)	1348
Bsp1286I	GDGCHC	4 cut(s)	572, 607, 1579, 1618
Bsp1407I	TGTACA	2 cut(s)	367, 1327
Bsp143I	GATC	7 cut(s)	1141, 1243, 1465, 1648, 1696, 1893, 1981
BspACI	CCGC	3 cut(s)	192, 253, 1585
BspANI	GGCC	5 cut(s)	308, 1388, 1421, 1800, 1865
BspCNI	CTCAG	4 cut(s)	388, 757, 1213, 1571
BspDI	ATCGAT	1 cut(s)	454
BspFNI	CGCG	1 cut(s)	255
BspLI	GGNNCC	5 cut(s)	108, 432, 642, 919, 1983
BspMAI	CTGCAG	1 cut(s)	907
BspMI	ACCTGC	1 cut(s)	880
BspPI	GGATC	4 cut(s)	1238, 1460, 1976, 1989
BspT107I	GGYRCC	1 cut(s)	917
BspTNI	GGTCTC	1 cut(s)	1919
BsrFI	RCCGGY	1 cut(s)	141
BsrGI	TGTACA	2 cut(s)	367, 1327
BsrI	ACTGG	2 cut(s)	493, 711
BssAI	RCCGGY	1 cut(s)	141
BssECI	CCNNGG	5 cut(s)	195, 636, 921, 1808, 1860
BssMI	GATC	7 cut(s)	1141, 1243, 1465, 1648, 1696, 1893, 1981
BssT1I	CCWWGG	2 cut(s)	636, 1808
Bst2UI	CCWGG	5 cut(s)	104, 922, 1423, 1470, 1919
Bst4CI	ACNGT	6 cut(s)	124, 337, 1455, 1524, 1574, 1943
Bst6I	CTCTTC	3 cut(s)	1151, 1167, 1982
BstAPI	GCANNNNNTGC	1 cut(s)	1750
BstAUI	TGTACA	2 cut(s)	367, 1327
BstBAI	YACGTR	2 cut(s)	163, 953
BstC8I	GCNNGC	7 cut(s)	143, 221, 469, 549, 1102, 1839, 1927
BstDEI	CTNAG	5 cut(s)	375, 765, 1221, 1283, 1558
BstF5I	GGATG	6 cut(s)	240, 656, 1330, 1669, 1710, 1927
BstFNI	CGCG	1 cut(s)	255
BstHHI	GCGC	1 cut(s)	257
BstKTI	GATC	7 cut(s)	1144, 1246, 1468, 1651, 1699, 1896, 1984
BstMAI	GTCTC	2 cut(s)	403, 1919
BstMBI	GATC	7 cut(s)	1141, 1243, 1465, 1648, 1696, 1893, 1981
BstMWI	GCNNNNNNNGC	9 cut(s)	43, 113, 151, 477, 557, 693, 1394, 1750, 1820
BstNI	CCWGG	5 cut(s)	104, 922, 1423, 1470, 1919
BstNSI	RCATGY	5 cut(s)	139, 475, 790, 1328, 1841
BstSCI	CCNGG	6 cut(s)	102, 920, 1421, 1468, 1860, 1917
BstSFI	CTRYAG	1 cut(s)	903
BstSLI	GKGCMC	2 cut(s)	607, 1579
BstSNI	TACGTA	1 cut(s)	953
BstUI	CGCG	1 cut(s)	255
BstV1I	GCAGC	1 cut(s)	17
BstV2I	GAAGAC	1 cut(s)	1300
BstX2I	RGATCY	1 cut(s)	1981
BstYI	RGATCY	1 cut(s)	1981
Bsu15I	ATCGAT	1 cut(s)	454
BsuRI	GGCC	5 cut(s)	308, 1388, 1421, 1800, 1865
BsuTUI	ATCGAT	1 cut(s)	454
BtrI	CACGTC	1 cut(s)	1339
BtsCI	GGATG	6 cut(s)	240, 656, 1330, 1669, 1710, 1927
BtsI	GCAGTG	1 cut(s)	614
BtsIMutI	CAGTG	2 cut(s)	614, 704
BveI	ACCTGC	1 cut(s)	880
Cac8I	GCNNGC	7 cut(s)	143, 221, 469, 549, 1102, 1839, 1927
CaiI	CAGNNNCTG	1 cut(s)	866
CfoI	GCGC	1 cut(s)	257
Cfr10I	RCCGGY	1 cut(s)	141
Cfr13I	GGNCC	1 cut(s)	641
ClaI	ATCGAT	1 cut(s)	454
CseI	GACGC	1 cut(s)	43
Csp6I	GTAC	3 cut(s)	112, 368, 1328
CspCI	CAANNNNNGTGG	2 cut(s)	1790, 1825
CviAII	CATG	8 cut(s)	136, 472, 787, 1139, 1325, 1838, 1844, 1910
CviQI	GTAC	3 cut(s)	112, 368, 1328
DdeI	CTNAG	5 cut(s)	375, 765, 1221, 1283, 1558
DpnI	GATC	7 cut(s)	1143, 1245, 1467, 1650, 1698, 1895, 1983
DpnII	GATC	7 cut(s)	1141, 1243, 1465, 1648, 1696, 1893, 1981
DraIII	CACNNNGTG	1 cut(s)	620
EaeI	YGGCCR	1 cut(s)	1798
Eam1104I	CTCTTC	3 cut(s)	1151, 1167, 1982
EarI	CTCTTC	3 cut(s)	1151, 1167, 1982
Eco105I	TACGTA	1 cut(s)	953
Eco130I	CCWWGG	2 cut(s)	636, 1808
Eco24I	GRGCYC	2 cut(s)	572, 1618
Eco31I	GGTCTC	1 cut(s)	1919
Eco32I	GATATC	1 cut(s)	1428
Eco47I	GGWCC	1 cut(s)	641
Eco57I	CTGAAG	4 cut(s)	68, 1083, 1191, 1344
Eco72I	CACGTG	1 cut(s)	163
Eco88I	CYCGRG	1 cut(s)	1348
EcoRII	CCWGG	5 cut(s)	102, 920, 1421, 1468, 1917
EcoRV	GATATC	1 cut(s)	1428
EcoT14I	CCWWGG	2 cut(s)	636, 1808
EcoT22I	ATGCAT	1 cut(s)	1755
EcoT38I	GRGCYC	2 cut(s)	572, 1618
ErhI	CCWWGG	2 cut(s)	636, 1808
FaeI	CATG	8 cut(s)	139, 475, 790, 1142, 1328, 1841, 1847, 1913
FaqI	GGGAC	1 cut(s)	768
FatI	CATG	8 cut(s)	135, 471, 786, 1138, 1324, 1837, 1843, 1909
FauNDI	CATATG	2 cut(s)	1459, 1755
FbaI	TGATCA	1 cut(s)	1893
FblI	GTMKAC	1 cut(s)	776
Fnu4HI	GCNGC	3 cut(s)	6, 192, 253
FokI	GGATG	6 cut(s)	227, 643, 1317, 1676, 1717, 1934
FriOI	GRGCYC	2 cut(s)	572, 1618
Fsp4HI	GCNGC	3 cut(s)	6, 192, 253
FspBI	CTAG	3 cut(s)	413, 1404, 1566
GlaI	GCGC	1 cut(s)	256
GluI	GCNGC	3 cut(s)	6, 192, 253
GsaI	CCCAGC	2 cut(s)	883, 1621
GsuI	CTGGAG	2 cut(s)	417, 728
HaeIII	GGCC	5 cut(s)	308, 1388, 1421, 1800, 1865
HapII	CCGG	3 cut(s)	142, 269, 1862
HgaI	GACGC	1 cut(s)	43
HhaI	GCGC	1 cut(s)	257
Hin1II	CATG	8 cut(s)	139, 475, 790, 1142, 1328, 1841, 1847, 1913
Hin6I	GCGC	1 cut(s)	255
HinP1I	GCGC	1 cut(s)	255
HincII	GTYRAC	2 cut(s)	509, 777
HindII	GTYRAC	2 cut(s)	509, 777
HindIII	AAGCTT	1 cut(s)	1102
HinfI	GANTC	5 cut(s)	149, 456, 624, 1365, 1906
HpaII	CCGG	3 cut(s)	142, 269, 1862
HphI	GGTGA	1 cut(s)	1424
Hpy166II	GTNNAC	5 cut(s)	368, 509, 605, 777, 1189
Hpy8I	GTNNAC	5 cut(s)	368, 509, 605, 777, 1189
Hpy99I	CGWCG	2 cut(s)	128, 178
HpyAV	CCTTC	5 cut(s)	356, 975, 1368, 1518, 1777
HpyCH4III	ACNGT	6 cut(s)	124, 337, 1455, 1524, 1574, 1943
HpyCH4IV	ACGT	6 cut(s)	162, 952, 1040, 1191, 1338, 1628
HpyF10VI	GCNNNNNNNGC	9 cut(s)	43, 113, 151, 477, 557, 693, 1394, 1750, 1820
HpyF3I	CTNAG	5 cut(s)	375, 765, 1221, 1283, 1558
HpySE526I	ACGT	6 cut(s)	162, 952, 1040, 1191, 1338, 1628
Hsp92II	CATG	8 cut(s)	139, 475, 790, 1142, 1328, 1841, 1847, 1913
HspAI	GCGC	1 cut(s)	255
KroI	GCCGGC	1 cut(s)	141
KroNI	GCCGGC	1 cut(s)	143
Ksp22I	TGATCA	1 cut(s)	1893
Kzo9I	GATC	7 cut(s)	1141, 1243, 1465, 1648, 1696, 1893, 1981
LmnI	GCTCC	4 cut(s)	112, 436, 693, 910
Lsp1109I	GCAGC	1 cut(s)	17
LweI	GCATC	5 cut(s)	665, 1384, 1695, 1740, 1912
MaeI	CTAG	3 cut(s)	413, 1404, 1566
MaeII	ACGT	6 cut(s)	162, 952, 1040, 1191, 1338, 1628
MaeIII	GTNAC	6 cut(s)	131, 711, 1057, 1165, 1726, 1943
MalI	GATC	7 cut(s)	1143, 1245, 1467, 1650, 1698, 1895, 1983
MboI	GATC	7 cut(s)	1141, 1243, 1465, 1648, 1696, 1893, 1981
MfeI	CAATTG	1 cut(s)	1210
MflI	RGATCY	1 cut(s)	1981
MhlI	GDGCHC	4 cut(s)	572, 607, 1579, 1618
MlsI	TGGCCA	1 cut(s)	1800
MluNI	TGGCCA	1 cut(s)	1800
MlyI	GAGTC	1 cut(s)	1359
MmeI	TCCRAC	4 cut(s)	156, 271, 1611, 1859
Mox20I	TGGCCA	1 cut(s)	1800
Mph1103I	ATGCAT	1 cut(s)	1755
MroNI	GCCGGC	1 cut(s)	141
MroXI	GAANNNNTTC	1 cut(s)	1766
MscI	TGGCCA	1 cut(s)	1800
MseI	TTAA	6 cut(s)	476, 809, 995, 1017, 1092, 1107
MslI	CAYNNNNRTG	1 cut(s)	1842
Msp20I	TGGCCA	1 cut(s)	1800
MspI	CCGG	3 cut(s)	142, 269, 1862
MspR9I	CCNGG	6 cut(s)	104, 922, 1423, 1470, 1862, 1919
MunI	CAATTG	1 cut(s)	1210
MvaI	CCWGG	5 cut(s)	104, 922, 1423, 1470, 1919
MvnI	CGCG	1 cut(s)	255
MwoI	GCNNNNNNNGC	9 cut(s)	43, 113, 151, 477, 557, 693, 1394, 1750, 1820
NaeI	GCCGGC	1 cut(s)	143
NciI	CCSGG	1 cut(s)	1862
NdeI	CATATG	2 cut(s)	1459, 1755
NdeII	GATC	7 cut(s)	1141, 1243, 1465, 1648, 1696, 1893, 1981
NgoMIV	GCCGGC	1 cut(s)	141
NlaIII	CATG	8 cut(s)	139, 475, 790, 1142, 1328, 1841, 1847, 1913
NlaIV	GGNNCC	5 cut(s)	108, 432, 642, 919, 1983
NmeAIII	GCCGAG	1 cut(s)	220
NmuCI	GTSAC	1 cut(s)	1057
NsiI	ATGCAT	1 cut(s)	1755
NspI	RCATGY	5 cut(s)	139, 475, 790, 1328, 1841
PaeI	GCATGC	1 cut(s)	1841
PaeR7I	CTCGAG	1 cut(s)	1348
PciI	ACATGT	1 cut(s)	135
PcsI	WCGNNNNNNNCGW	2 cut(s)	120, 460
PdiI	GCCGGC	1 cut(s)	143
PdmI	GAANNNNTTC	1 cut(s)	1766
PfeI	GAWTC	4 cut(s)	149, 456, 624, 1906
Pfl23II	CGTACG	1 cut(s)	111
PflMI	CCANNNNNTGG	2 cut(s)	103, 620
PfoI	TCCNGGA	1 cut(s)	1917
PkrI	GCNGC	3 cut(s)	7, 193, 254
PleI	GAGTC	1 cut(s)	1359
PmaCI	CACGTG	1 cut(s)	163
PmlI	CACGTG	1 cut(s)	163
PpsI	GAGTC	1 cut(s)	1359
Ppu21I	YACGTR	2 cut(s)	163, 953
PscI	ACATGT	1 cut(s)	135
PsiI	TTATAA	1 cut(s)	939
Psp6I	CCWGG	5 cut(s)	102, 920, 1421, 1468, 1917
PspCI	CACGTG	1 cut(s)	163
PspFI	CCCAGC	2 cut(s)	879, 1617
PspGI	CCWGG	5 cut(s)	102, 920, 1421, 1468, 1917
PspLI	CGTACG	1 cut(s)	111
PspN4I	GGNNCC	5 cut(s)	108, 432, 642, 919, 1983
PspPI	GGNCC	1 cut(s)	641
PspXI	VCTCGAGB	1 cut(s)	1348
PstI	CTGCAG	1 cut(s)	907
PstNI	CAGNNNCTG	1 cut(s)	866
PsuI	RGATCY	1 cut(s)	1981
RsaI	GTAC	3 cut(s)	113, 369, 1329
RsaNI	GTAC	3 cut(s)	112, 368, 1328
RseI	CAYNNNNRTG	1 cut(s)	1842
SalI	GTCGAC	1 cut(s)	775
SaqAI	TTAA	6 cut(s)	476, 809, 995, 1017, 1092, 1107
SatI	GCNGC	3 cut(s)	6, 192, 253
Sau3AI	GATC	7 cut(s)	1141, 1243, 1465, 1648, 1696, 1893, 1981
Sau96I	GGNCC	1 cut(s)	641
SchI	GAGTC	1 cut(s)	1359
ScrFI	CCNGG	6 cut(s)	104, 922, 1423, 1470, 1862, 1919
SduI	GDGCHC	4 cut(s)	572, 607, 1579, 1618
SfaNI	GCATC	5 cut(s)	665, 1384, 1695, 1740, 1912
SfcI	CTRYAG	1 cut(s)	903
Sfr274I	CTCGAG	1 cut(s)	1348
SinI	GGWCC	1 cut(s)	641
SlaI	CTCGAG	1 cut(s)	1348
SmiMI	CAYNNNNRTG	1 cut(s)	1842
SmlI	CTYRAG	1 cut(s)	1348
SmoI	CTYRAG	1 cut(s)	1348
SnaBI	TACGTA	1 cut(s)	953
SpeI	ACTAGT	1 cut(s)	412
SphI	GCATGC	1 cut(s)	1841
SsiI	CCGC	3 cut(s)	192, 253, 1585
SspI	AATATT	1 cut(s)	898
SspMI	CTAG	3 cut(s)	413, 1404, 1566
StyD4I	CCNGG	6 cut(s)	102, 920, 1421, 1468, 1860, 1917
StyI	CCWWGG	2 cut(s)	636, 1808
TaaI	ACNGT	6 cut(s)	124, 337, 1455, 1524, 1574, 1943
TaiI	ACGT	6 cut(s)	165, 955, 1043, 1194, 1341, 1631
TaqI	TCGA	7 cut(s)	118, 347, 454, 463, 776, 1349, 1445
TatI	WGTACW	2 cut(s)	367, 1327
TauI	GCSGC	2 cut(s)	194, 255
TfiI	GAWTC	4 cut(s)	149, 456, 624, 1906
Tru1I	TTAA	6 cut(s)	476, 809, 995, 1017, 1092, 1107
Tru9I	TTAA	6 cut(s)	476, 809, 995, 1017, 1092, 1107
TscAI	CASTG	2 cut(s)	621, 711
TseFI	GTSAC	1 cut(s)	1057
TseI	GCWGC	1 cut(s)	5
Tsp45I	GTSAC	1 cut(s)	1057
TspDTI	ATGAA	3 cut(s)	68, 960, 1949
TspGWI	ACGGA	2 cut(s)	99, 1068
TspRI	CASTG	2 cut(s)	621, 711
Van91I	CCANNNNNTGG	2 cut(s)	103, 620
VneI	GTGCAC	1 cut(s)	603
VpaK11BI	GGWCC	1 cut(s)	641
XapI	RAATTY	3 cut(s)	520, 1157, 1315
XceI	RCATGY	5 cut(s)	139, 475, 790, 1328, 1841
XcmI	CCANNNNNNNNNTGG	1 cut(s)	643
XhoI	CTCGAG	1 cut(s)	1348
XmiI	GTMKAC	1 cut(s)	776
XmnI	GAANNNNTTC	1 cut(s)	1766
XspI	CTAG	3 cut(s)	413, 1404, 1566
Zsp2I	ATGCAT	1 cut(s)	1755

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.