Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0005018

Physical Location & Seq

Genomic Coordinates Reverse (-)

34564103 .. 34567865

Gene Structure 3763 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1258600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2814 bp

ATGGCCACGTTTCTGGTAGAGACCTTGCTTAATTCTTTGGTTCATTGGTGGGAAGTCTGTCAGCCAAGTGATTTGGGATCACTTGGAATTTTTCTGGAAACCCATCTGGGTAATTTGGAGATCTGGGATTTGCTTAGGGTCTTATGCCCCATGAGGACTTTCTTTCCCTCTGAGTCTGGTAAAGGATCACAGCTCAATGCCCTCAATCCAGAGTCATGGCTCCAGGTGGAAAGAGGGAAGCTTTCCAAGCTTCCATCAAACTCCTCTTCTTCTATAGAATCTTTTATCAAGGTCGCCGAGCCGCCAATACTCCCGTTCTATAAACCTGTTGATTATGTCGAAGTTTTAGCTCAAATTCATGAAGAACTTGAGTTGTGTCCTCCACAGGAACAGTCGAATCTTTACTTGTTACAATTCCAGGTCTTTAGGGGCCTCGGAGAAGTCAAGCTGATGCGAAGAAGCCTTCGTGCAGCTTGGCAGAAAGCTAGCTCCATTCATGAGAAGCTCATTTTTGGAGCATGGTTGAAGTATGAAAAGCAAGGGGAAGAGCATATTTCCGACTTGCTTGCCAGTTGTGATAAATGTGCACTAGAATTTGGGCCAGTAGATATTTTGACTCAGCTTCCTATTGATGCAACTGTAAGTCGTACACATGAGAATATTTCGATGAATGGGAACGAAATACCAAGAAATGTCAGTTTTCGAATACAAGATGAGAAAGTAGATTGTGATAGGCAGAAAATATCAAGCCTTTCTGCTCCATTTCATGCCATGCTTAATGGGTGTTTCTCGGAATCACTTCGTGAGGACATAGATTTGTCACAAAACAATATCAGTGCATCAGGTATGAGGACAATCATTGAGTTCAGTATGACAGGCAGTTTGAATGAAGTCCCTACTCATCTTTTGTTGGAAATATTAGTTTTTGCAAATAAATTTTGTTGCGAAAAGCTTAAAGATGTTTGCGACCGGAAACTTGCATCCTTGGTGTCTTCTAGAGAAGATGCGGTAGAACTCATGGAGTATGCTCTTGCAGAGAACTGTCCTGTCCTTGCTGCATCATGTTTACAAGTTTTCTTAAATGATCTTCCTGATTGTTTGAATGACAACCGAGTGGTGGATATATTCAGGCATGCTGATAGACAACAGAGATCGATCATGGTTGGGCAAGCCTCGTTTTCGCTATACTGTTTATTAAGTGAAGTTTGTATGAACCTTGATCCGCAGTTGGATAAAACAGCTTGTTTCCTGGAACGGTTGGTAGAGTTTTCTGAAAATGATAGACAAAGAATGCTGGCATTCCATCAGTTGGGATGCCTGAGGCTCTTGAGAAAAGAGTATGACGAAGCTAAGTGCCTTTTTGAAGAAGCTTTAAATGCAGGCCATATATATTCAGTAGCAGGATTAGCGAGACTGAGTTACATTAAGGGCCATAAACTTTGGTCATATGAAAAGCTTAGCTCTGTAATCTGCGCTGTTACGCCGCTTGGATGGATGTATCAGGAGAGGTCCTTGTACTGTGAAGGTGATAAGAGATGGGAAGACCTTGAGAAAGCATCTGAGCTGGATCCAACTCTTACTTACCCTTACATGTATCGTGCGGCTACATTAATGAGAAACCAGAATGTTCAAGCTGCACTTGCAGAAATTAATCGGGTTCTGGGGTTTAAACTTGCATTAGAATGCTTGGAACTCCGGTTTTGTTTCTATCTTGCTCTTGAGGACTATAAATCAGCCATTTGTGATGTTCAAGCAATTCTGACTCTCTCCCCGGATTATAGAATGTTTGAGGGACGAGTGGCAGCATCCCAATTTTGCACACTTGTGCGTGAGCATGTAGAAAATTGGACAACGGCAGATTGTTGGCTGCAATTGTATGATCGTTGGTCTTCAGTCGATGATATTGGATCCCTCTCGGTTATTTACCAGATGCTTGAATCTGATGCAGCAAAAGGTGTTCTGTATTTCAGACAGTCATTGCTTCTTCTCAGGTTGAACTGTCCCGAAGCAGCAATGCGAAGTTTACAATTAGCTCGTCAACATGCATCCAGCGATGATGAAAAGTTGGTTTATGAGGGGTGGATCTTATACGATACAGGCCATTGTGAGGAAGGGCTCCGGAAAGCAGAGGAATCTATCCAAATTAAAAGATCCTTTGAGGCTTTCTTTTTGAAAGCCTATGCACTGGCAGACTCTAGCCAGGATCCATCCTCTTCATCGACTGTTGTATCCCTCCTTGAAGATGCCTTGAAGTGCCCATCGGACAGGTTGCGTAAAGGTCAAGCACTCAACAACCTTGGAAGTGTTTATGTTGATCGTGGGAAGTTAGACTTGGCAGCTGATTGCTACATAAATGCTCTAAAGATCAGGCATACCCGAGCACACCAGGGCCTTGCTCGGGTTCATTTTCTCAGAGACGACAAGTCTGCTGCATACGAGGAAATGACCAAACTGATTGAGAAGGCCCGGAACAATGCATCTGCCTACGAGAAGAGGTCTGAATACTGTGATCGCGAACTCACAAAGACTGATCTGGAGATGGTCACCTACTTAGATCCGCTTCGGGTGTACCCTTACAGATATAGAGCTGCAGTGTTAATGGATAGCCACAAAGAAGCAGAGGCCATTGCCGAACTATCAAGGGCAATTGCATTCAAAGCCGACCTCCACCTTCTGCACTTACGGGCGGCATTCCATGAGCACGTTGGAGACGTCTTGGGTGCTTTGCGAGACTGTCGAGCCGCTCTCTCTGTCGATCCGAACCATCAAGAGATGCTGGAGCTTCATAGCCGTGTAAACTGCCATGAACCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0006521 GO:0008150 GO:0009889 GO:0010364 GO:0010565 GO:0010817 GO:0019222 GO:0031323 GO:0031326 GO:0031335 GO:0032350 GO:0033238 GO:0042762 GO:0046885 GO:0050789 GO:0050794 GO:0051171 GO:0062012 GO:0065007 GO:0065008 GO:0080090 GO:1900908 GO:1900911

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB TPR_8

Protein Analysis

938

Amino Acids

106.71

Weight (kDa)

5.39

Isoelectric Point (pI)

46.18

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005018)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02680
fragaria_vesca	FvH4_2g23020 FvH4_2g23020 FvH4_2g23020 FvH4_2g23020 FvH4_2g23020 FvH4_2g23020 FvH4_2g23020
malus_domestica	MD03G1258600.v1.1 MD11G1279200.v1.1
prunus_persica	Prupe.8G235100_v2.0.a1 Prupe.8G235100_v2.0.a1 Prupe.8G235100_v2.0.a1 Prupe.8G235100_v2.0.a1 Prupe.8G235100_v2.0.a1
pyrus_communis	pycom03g20480 pycom03g20560
rosa_chinensis	RchiOBHm_Chr6g0290061
rosa_laevigata	RLG00000012249
rosa_multiflora	Rmu_sc0002902.1_g000038
rosa_roxburghii	Rroxscaffold_7G00177380
rosa_rugosa	Rorug06G0209200 Rorug06G0209300 Rorug06G0209400 Rorug06G0209500
rosa_samantha	Rh6AG320100 Rh6BG327300 Rh6CG333000 Rh6DG318900
rosa_wichuraiana	Rw6G027620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	2715
AccB7I	CCANNNNNTGG	1 cut(s)	1309
AccBSI	CCGCTC	1 cut(s)	2744
AccII	CGCG	1 cut(s)	2514
AccIII	TCCGGA	1 cut(s)	2118
AciI	CCGC	8 cut(s)	302, 1007, 1223, 1484, 1601, 2558, 2687, 2742
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	4 cut(s)	87, 354, 593, 935
AcuI	CTGAAG	1 cut(s)	1875
AcyI	GRCGYC	1 cut(s)	2712
AdeI	CACNNNGTG	1 cut(s)	803
AfaI	GTAC	3 cut(s)	649, 1517, 2570
AfiI	CCNNNNNNNGG	4 cut(s)	1117, 1309, 2107, 2398
AflIII	ACRYGT	1 cut(s)	1590
AhdI	GACNNNNNGTC	1 cut(s)	2422
AjnI	CCWGG	5 cut(s)	222, 417, 1248, 2199, 2385
AjuI	GAANNNNNNNTTGG	2 cut(s)	2315, 2347
AleI	CACNNNNGTG	1 cut(s)	1823
Alw21I	GWGCWC	3 cut(s)	589, 2383, 2703
Alw26I	GTCTC	5 cut(s)	14, 1405, 2409, 2703, 2724
Alw44I	GTGCAC	1 cut(s)	585
Ama87I	CYCGRG	2 cut(s)	2376, 2397
Aor13HI	TCCGGA	1 cut(s)	2118
AoxI	GGCC	9 cut(s)	3, 430, 599, 1381, 1429, 2098, 2389, 2463, 2622
ApaLI	GTGCAC	1 cut(s)	585
ApoI	RAATTY	4 cut(s)	87, 354, 593, 935
ArsI	GACNNNNNNTTYG	2 cut(s)	865, 897
AseI	ATTAAT	2 cut(s)	1610, 1650
Asp700I	GAANNNNTTC	1 cut(s)	798
AspLEI	GCGC	1 cut(s)	1475
AspS9I	GGNCC	6 cut(s)	430, 599, 1429, 1509, 2389, 2464
AsuC2I	CCSGG	2 cut(s)	1772, 2467
AsuHPI	GGTGA	2 cut(s)	1538, 2536
AsuII	TTCGAA	1 cut(s)	703
AsuNHI	GCTAGC	1 cut(s)	485
AvaI	CYCGRG	2 cut(s)	2376, 2397
AvaII	GGWCC	1 cut(s)	1509
AxyI	CCTNAGG	1 cut(s)	1319
BaeGI	GKGCMC	2 cut(s)	589, 2258
BaeI	ACNNNNGTAYC	2 cut(s)	2211, 2244
BalI	TGGCCA	1 cut(s)	5
BamHI	GGATCC	3 cut(s)	1567, 1907, 2203
BanII	GRGCYC	1 cut(s)	2118
BbsI	GAAGAC	3 cut(s)	984, 1548, 1881
Bbv12I	GWGCWC	3 cut(s)	589, 2383, 2703
BccI	CCATC	9 cut(s)	111, 262, 1311, 1485, 1530, 2215, 2266, 2533, 2772
BceAI	ACGGC	2 cut(s)	1869, 2775
BcgI	CGANNNNNNTGC	4 cut(s)	548, 582, 2408, 2442
BciT130I	CCWGG	5 cut(s)	224, 419, 1250, 2201, 2387
BciVI	GTATCC	1 cut(s)	2239
BcnI	CCSGG	2 cut(s)	1772, 2467
BcoDI	GTCTC	5 cut(s)	14, 1405, 2409, 2703, 2724
BfaI	CTAG	4 cut(s)	486, 590, 996, 2196
BfmI	CTRYAG	2 cut(s)	273, 2589
BfuI	GTATCC	1 cut(s)	2239
BglII	AGATCT	1 cut(s)	120
BlpI	GCTNAGC	1 cut(s)	1457
Bme1390I	CCNGG	7 cut(s)	224, 419, 1250, 1772, 2201, 2387, 2467
Bme18I	GGWCC	1 cut(s)	1509
BmeRI	GACNNNNNGTC	1 cut(s)	2422
BmeT110I	CYCGRG	2 cut(s)	2376, 2397
BmgT120I	GGNCC	6 cut(s)	430, 599, 1429, 1509, 2389, 2464
BmiI	GGNNCC	6 cut(s)	221, 431, 1569, 1909, 2117, 2205
BmrFI	CCNGG	7 cut(s)	224, 419, 1250, 1772, 2201, 2387, 2467
BmtI	GCTAGC	1 cut(s)	489
BpiI	GAAGAC	3 cut(s)	984, 1548, 1881
BplI	GAGNNNNNCTC	2 cut(s)	2730, 2762
BpmI	CTGGAG	3 cut(s)	206, 2555, 2798
Bpu10I	CCTNAGC	1 cut(s)	134
Bpu1102I	GCTNAGC	1 cut(s)	1457
Bpu14I	TTCGAA	1 cut(s)	703
BpuEI	CTTGAG	4 cut(s)	389, 1348, 1568, 1739
BpuMI	CCSGG	2 cut(s)	1772, 2467
Bsa29I	ATCGAT	1 cut(s)	1154
BsaHI	GRCGYC	1 cut(s)	2712
BsaI	GGTCTC	1 cut(s)	14
BsaJI	CCNNGG	5 cut(s)	433, 984, 1770, 2296, 2386
BsaWI	WCCGGW	3 cut(s)	969, 1695, 2118
Bsc4I	CCNNNNNNNGG	4 cut(s)	1117, 1309, 2107, 2398
Bse1I	ACTGG	3 cut(s)	570, 602, 2190
Bse21I	CCTNAGG	1 cut(s)	1319
Bse3DI	GCAATG	3 cut(s)	1976, 2019, 2625
BseAI	TCCGGA	1 cut(s)	2118
BseBI	CCWGG	5 cut(s)	224, 419, 1250, 2201, 2387
BseCI	ATCGAT	1 cut(s)	1154
BseDI	CCNNGG	5 cut(s)	433, 984, 1770, 2296, 2386
BseGI	GGATG	7 cut(s)	980, 1319, 1496, 1500, 1805, 2045, 2207
BseLI	CCNNNNNNNGG	4 cut(s)	1117, 1309, 2107, 2398
BseMI	GCAATG	3 cut(s)	1976, 2019, 2625
BseMII	CTCAG	7 cut(s)	162, 632, 1310, 1406, 1551, 2002, 2425
BseNI	ACTGG	3 cut(s)	570, 602, 2190
BseRI	GAGGAG	1 cut(s)	253
BseSI	GKGCMC	2 cut(s)	589, 2258
BsgI	GTGCAG	3 cut(s)	489, 1620, 2660
Bsh1236I	CGCG	1 cut(s)	2514
Bsh1285I	CGRYCG	1 cut(s)	970
BshFI	GGCC	9 cut(s)	5, 432, 601, 1383, 1431, 2100, 2391, 2465, 2624
BshVI	ATCGAT	1 cut(s)	1154
BsiEI	CGRYCG	1 cut(s)	970
BsiHKAI	GWGCWC	3 cut(s)	589, 2383, 2703
BsiHKCI	CYCGRG	2 cut(s)	2376, 2397
BsiSI	CCGG	5 cut(s)	970, 1696, 1772, 2119, 2467
BslFI	GGGAC	3 cut(s)	878, 1806, 1986
BslI	CCNNNNNNNGG	4 cut(s)	1117, 1309, 2107, 2398
BsmAI	GTCTC	5 cut(s)	14, 1405, 2409, 2703, 2724
BsmBI	CGTCTC	2 cut(s)	2409, 2703
BsmFI	GGGAC	3 cut(s)	878, 1806, 1986
BsmI	GAATGC	5 cut(s)	1296, 1298, 1688, 2651, 2690
BsnI	GGCC	9 cut(s)	5, 432, 601, 1383, 1431, 2100, 2391, 2465, 2624
Bso31I	GGTCTC	1 cut(s)	14
BsoBI	CYCGRG	2 cut(s)	2376, 2397
Bsp119I	TTCGAA	1 cut(s)	703
Bsp1286I	GDGCHC	5 cut(s)	589, 2118, 2258, 2383, 2703
Bsp13I	TCCGGA	1 cut(s)	2118
Bsp1720I	GCTNAGC	1 cut(s)	1457
Bsp68I	TCGCGA	1 cut(s)	2514
BspACI	CCGC	8 cut(s)	302, 1007, 1223, 1484, 1601, 2558, 2687, 2742
BspANI	GGCC	9 cut(s)	5, 432, 601, 1383, 1431, 2100, 2391, 2465, 2624
BspCNI	CTCAG	7 cut(s)	163, 631, 1311, 1407, 1552, 2001, 2424
BspDI	ATCGAT	1 cut(s)	1154
BspEI	TCCGGA	1 cut(s)	2118
BspFNI	CGCG	1 cut(s)	2514
BspHI	TCATGA	2 cut(s)	358, 496
BspLI	GGNNCC	6 cut(s)	221, 431, 1569, 1909, 2117, 2205
BspMAI	CTGCAG	1 cut(s)	2593
BspOI	GCTAGC	1 cut(s)	489
BspQI	GCTCTTC	1 cut(s)	540
BspT104I	TTCGAA	1 cut(s)	703
BspTNI	GGTCTC	1 cut(s)	14
BsrBI	CCGCTC	1 cut(s)	2744
BsrDI	GCAATG	3 cut(s)	1976, 2019, 2625
BsrI	ACTGG	3 cut(s)	570, 602, 2190
BssECI	CCNNGG	5 cut(s)	433, 984, 1770, 2296, 2386
BssNI	GRCGYC	1 cut(s)	2712
BssT1I	CCWWGG	2 cut(s)	984, 2296
Bst2UI	CCWGG	5 cut(s)	224, 419, 1250, 2201, 2387
Bst6I	CTCTTC	4 cut(s)	271, 540, 2218, 2486
BstACI	GRCGYC	1 cut(s)	2712
BstBI	TTCGAA	1 cut(s)	703
BstC8I	GCNNGC	6 cut(s)	487, 567, 1134, 1170, 1296, 1381
BstEII	GGTNACC	1 cut(s)	2542
BstF5I	GGATG	7 cut(s)	980, 1319, 1496, 1500, 1805, 2045, 2207
BstFNI	CGCG	1 cut(s)	2514
BstHHI	GCGC	1 cut(s)	1475
BstMAI	GTCTC	5 cut(s)	14, 1405, 2409, 2703, 2724
BstMCI	CGRYCG	1 cut(s)	970
BstMWI	GCNNNNNNNGC	5 cut(s)	247, 1376, 1406, 1640, 2657
BstNI	CCWGG	5 cut(s)	224, 419, 1250, 2201, 2387
BstNSI	RCATGY	4 cut(s)	1136, 1594, 1838, 2045
BstPI	GGTNACC	1 cut(s)	2542
BstSCI	CCNGG	7 cut(s)	222, 417, 1248, 1770, 2199, 2385, 2465
BstSFI	CTRYAG	2 cut(s)	273, 2589
BstSLI	GKGCMC	2 cut(s)	589, 2258
BstUI	CGCG	1 cut(s)	2514
BstV2I	GAAGAC	3 cut(s)	984, 1548, 1881
BstX2I	RGATCY	7 cut(s)	120, 1567, 1907, 2082, 2150, 2203, 2554
BstXI	CCANNNNNNTGG	2 cut(s)	13, 216
BstYI	RGATCY	7 cut(s)	120, 1567, 1907, 2082, 2150, 2203, 2554
Bsu15I	ATCGAT	1 cut(s)	1154
Bsu36I	CCTNAGG	1 cut(s)	1319
BsuI	GTATCC	1 cut(s)	2239
BsuRI	GGCC	9 cut(s)	5, 432, 601, 1383, 1431, 2100, 2391, 2465, 2624
BsuTUI	ATCGAT	1 cut(s)	1154
BtgZI	GCGATG	1 cut(s)	2067
BtsCI	GGATG	7 cut(s)	980, 1319, 1496, 1500, 1805, 2045, 2207
BtsI	GCAGTG	1 cut(s)	2598
BtsIMutI	CAGTG	3 cut(s)	841, 2183, 2598
BtuMI	TCGCGA	1 cut(s)	2514
Cac8I	GCNNGC	6 cut(s)	487, 567, 1134, 1170, 1296, 1381
CciI	TCATGA	2 cut(s)	358, 496
CfoI	GCGC	1 cut(s)	1475
Cfr13I	GGNCC	6 cut(s)	430, 599, 1429, 1509, 2389, 2464
ClaI	ATCGAT	1 cut(s)	1154
Csp6I	GTAC	3 cut(s)	648, 1516, 2569
CviQI	GTAC	3 cut(s)	648, 1516, 2569
DraI	TTTAAA	2 cut(s)	1374, 1669
DraIII	CACNNNGTG	1 cut(s)	803
DriI	GACNNNNNGTC	1 cut(s)	2422
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	4 cut(s)	271, 540, 2218, 2486
Eam1105I	GACNNNNNGTC	1 cut(s)	2422
EarI	CTCTTC	4 cut(s)	271, 540, 2218, 2486
Eco130I	CCWWGG	2 cut(s)	984, 2296
Eco24I	GRGCYC	1 cut(s)	2118
Eco31I	GGTCTC	1 cut(s)	14
Eco47I	GGWCC	1 cut(s)	1509
Eco57I	CTGAAG	1 cut(s)	1875
Eco81I	CCTNAGG	1 cut(s)	1319
Eco88I	CYCGRG	2 cut(s)	2376, 2397
Eco91I	GGTNACC	1 cut(s)	2542
EcoO109I	RGGNCCY	3 cut(s)	430, 1509, 2389
EcoO65I	GGTNACC	1 cut(s)	2542
EcoRII	CCWGG	5 cut(s)	222, 417, 1248, 2199, 2385
EcoT14I	CCWWGG	2 cut(s)	984, 2296
EcoT22I	ATGCAT	2 cut(s)	2047, 2479
EcoT38I	GRGCYC	1 cut(s)	2118
ErhI	CCWWGG	2 cut(s)	984, 2296
Esp3I	CGTCTC	2 cut(s)	2409, 2703
FalI	AAGNNNNNCTT	4 cut(s)	1623, 1655, 2315, 2347
FaqI	GGGAC	3 cut(s)	878, 1806, 1986
FauNDI	CATATG	1 cut(s)	1447
FokI	GGATG	7 cut(s)	967, 1326, 1503, 1507, 1792, 2032, 2194
FriOI	GRGCYC	1 cut(s)	2118
FspBI	CTAG	4 cut(s)	486, 590, 996, 2196
GlaI	GCGC	1 cut(s)	1474
GsuI	CTGGAG	3 cut(s)	206, 2555, 2798
HaeIII	GGCC	9 cut(s)	5, 432, 601, 1383, 1431, 2100, 2391, 2465, 2624
HapII	CCGG	5 cut(s)	970, 1696, 1772, 2119, 2467
HhaI	GCGC	1 cut(s)	1475
Hin1I	GRCGYC	1 cut(s)	2712
Hin6I	GCGC	1 cut(s)	1473
HinP1I	GCGC	1 cut(s)	1473
HincII	GTYRAC	1 cut(s)	2039
HindII	GTYRAC	1 cut(s)	2039
HindIII	AAGCTT	5 cut(s)	239, 248, 950, 1368, 1454
HpaII	CCGG	5 cut(s)	970, 1696, 1772, 2119, 2467
HphI	GGTGA	2 cut(s)	1538, 2536
Hpy166II	GTNNAC	7 cut(s)	587, 650, 1067, 2024, 2039, 2569, 2797
Hpy8I	GTNNAC	7 cut(s)	587, 650, 1067, 2024, 2039, 2569, 2797
HpyAV	CCTTC	5 cut(s)	473, 1517, 2105, 2455, 2681
HpyCH4IV	ACGT	3 cut(s)	8, 2703, 2712
HpyF10VI	GCNNNNNNNGC	5 cut(s)	247, 1376, 1406, 1640, 2657
HpySE526I	ACGT	3 cut(s)	8, 2703, 2712
Hsp92I	GRCGYC	1 cut(s)	2712
HspAI	GCGC	1 cut(s)	1473
Kpn2I	TCCGGA	1 cut(s)	2118
LguI	GCTCTTC	1 cut(s)	540
LmnI	GCTCC	6 cut(s)	225, 494, 515, 763, 2121, 2779
MaeI	CTAG	4 cut(s)	486, 590, 996, 2196
MaeII	ACGT	3 cut(s)	8, 2703, 2712
MaeIII	GTNAC	5 cut(s)	408, 819, 1418, 1477, 2542
MbiI	CCGCTC	1 cut(s)	2744
MfeI	CAATTG	2 cut(s)	1871, 2646
MflI	RGATCY	7 cut(s)	120, 1567, 1907, 2082, 2150, 2203, 2554
MhlI	GDGCHC	5 cut(s)	589, 2118, 2258, 2383, 2703
MlsI	TGGCCA	1 cut(s)	5
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	5 cut(s)	182, 221, 610, 1756, 2186
MmeI	TCCRAC	5 cut(s)	582, 891, 1209, 1595, 2686
Mox20I	TGGCCA	1 cut(s)	5
Mph1103I	ATGCAT	2 cut(s)	2047, 2479
MroI	TCCGGA	1 cut(s)	2118
MroXI	GAANNNNTTC	1 cut(s)	798
MscI	TGGCCA	1 cut(s)	5
MslI	CAYNNNNRTG	3 cut(s)	1681, 1823, 2790
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	1 cut(s)	2339
MspI	CCGG	5 cut(s)	970, 1696, 1772, 2119, 2467
MspR9I	CCNGG	7 cut(s)	224, 419, 1250, 1772, 2201, 2387, 2467
MssI	GTTTAAAC	1 cut(s)	1669
MunI	CAATTG	2 cut(s)	1871, 2646
Mva1269I	GAATGC	5 cut(s)	1296, 1298, 1688, 2651, 2690
MvaI	CCWGG	5 cut(s)	224, 419, 1250, 2201, 2387
MvnI	CGCG	1 cut(s)	2514
MwoI	GCNNNNNNNGC	5 cut(s)	247, 1376, 1406, 1640, 2657
NciI	CCSGG	2 cut(s)	1772, 2467
NdeI	CATATG	1 cut(s)	1447
NheI	GCTAGC	1 cut(s)	485
NlaIV	GGNNCC	6 cut(s)	221, 431, 1569, 1909, 2117, 2205
NmeAIII	GCCGAG	1 cut(s)	322
NmuCI	GTSAC	2 cut(s)	819, 2542
NruI	TCGCGA	1 cut(s)	2514
NsiI	ATGCAT	2 cut(s)	2047, 2479
NspI	RCATGY	4 cut(s)	1136, 1594, 1838, 2045
NspV	TTCGAA	1 cut(s)	703
OliI	CACNNNNGTG	1 cut(s)	1823
PaeI	GCATGC	1 cut(s)	1136
PagI	TCATGA	2 cut(s)	358, 496
PciI	ACATGT	1 cut(s)	1590
PciSI	GCTCTTC	1 cut(s)	540
PcsI	WCGNNNNNNNCGW	1 cut(s)	2709
PctI	GAATGC	5 cut(s)	1296, 1298, 1688, 2651, 2690
PdmI	GAANNNNTTC	1 cut(s)	798
PfeI	GAWTC	5 cut(s)	278, 397, 794, 1937, 2132
PflMI	CCANNNNNTGG	1 cut(s)	1309
PfoI	TCCNGGA	1 cut(s)	1248
PleI	GAGTC	5 cut(s)	181, 220, 610, 1756, 2186
PmeI	GTTTAAAC	1 cut(s)	1669
PpsI	GAGTC	5 cut(s)	181, 220, 610, 1756, 2186
PpuMI	RGGWCCY	1 cut(s)	1509
PscI	ACATGT	1 cut(s)	1590
PshBI	ATTAAT	2 cut(s)	1610, 1650
Psp5II	RGGWCCY	1 cut(s)	1509
Psp6I	CCWGG	5 cut(s)	222, 417, 1248, 2199, 2385
PspEI	GGTNACC	1 cut(s)	2542
PspGI	CCWGG	5 cut(s)	222, 417, 1248, 2199, 2385
PspN4I	GGNNCC	6 cut(s)	221, 431, 1569, 1909, 2117, 2205
PspPI	GGNCC	6 cut(s)	430, 599, 1429, 1509, 2389, 2464
PspPPI	RGGWCCY	1 cut(s)	1509
PstI	CTGCAG	1 cut(s)	2593
PsuI	RGATCY	7 cut(s)	120, 1567, 1907, 2082, 2150, 2203, 2554
PvuII	CAGCTG	1 cut(s)	2339
RruI	TCGCGA	1 cut(s)	2514
RsaI	GTAC	3 cut(s)	649, 1517, 2570
RsaNI	GTAC	3 cut(s)	648, 1516, 2569
RseI	CAYNNNNRTG	3 cut(s)	1681, 1823, 2790
SapI	GCTCTTC	1 cut(s)	540
Sau96I	GGNCC	6 cut(s)	430, 599, 1429, 1509, 2389, 2464
SchI	GAGTC	5 cut(s)	182, 221, 610, 1756, 2186
ScrFI	CCNGG	7 cut(s)	224, 419, 1250, 1772, 2201, 2387, 2467
SduI	GDGCHC	5 cut(s)	589, 2118, 2258, 2383, 2703
SfcI	CTRYAG	2 cut(s)	273, 2589
SfuI	TTCGAA	1 cut(s)	703
SinI	GGWCC	1 cut(s)	1509
SmiMI	CAYNNNNRTG	3 cut(s)	1681, 1823, 2790
SmlI	CTYRAG	4 cut(s)	368, 1327, 1547, 1718
SmoI	CTYRAG	4 cut(s)	368, 1327, 1547, 1718
SphI	GCATGC	1 cut(s)	1136
SsiI	CCGC	8 cut(s)	302, 1007, 1223, 1484, 1601, 2558, 2687, 2742
SspI	AATATT	2 cut(s)	661, 918
SspMI	CTAG	4 cut(s)	486, 590, 996, 2196
StyD4I	CCNGG	7 cut(s)	222, 417, 1248, 1770, 2199, 2385, 2465
StyI	CCWWGG	2 cut(s)	984, 2296
TaiI	ACGT	3 cut(s)	11, 2706, 2715
TaqI	TCGA	9 cut(s)	339, 395, 665, 703, 1154, 1896, 2219, 2737, 2754
TatI	WGTACW	1 cut(s)	1515
TauI	GCSGC	5 cut(s)	304, 1486, 1604, 2690, 2744
TfiI	GAWTC	5 cut(s)	278, 397, 794, 1937, 2132
TscAI	CASTG	3 cut(s)	841, 2190, 2598
TseFI	GTSAC	2 cut(s)	819, 2542
Tsp45I	GTSAC	2 cut(s)	819, 2542
TspRI	CASTG	3 cut(s)	841, 2190, 2598
Van91I	CCANNNNNTGG	1 cut(s)	1309
VneI	GTGCAC	1 cut(s)	585
VpaK11BI	GGWCC	1 cut(s)	1509
VspI	ATTAAT	2 cut(s)	1610, 1650
XapI	RAATTY	4 cut(s)	87, 354, 593, 935
XbaI	TCTAGA	1 cut(s)	995
XceI	RCATGY	4 cut(s)	1136, 1594, 1838, 2045
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2702
XmnI	GAANNNNTTC	1 cut(s)	798
XspI	CTAG	4 cut(s)	486, 590, 996, 2196
ZraI	GACGTC	1 cut(s)	2713
Zsp2I	ATGCAT	2 cut(s)	2047, 2479

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.