Rorug06G0209500

ETO1-like protein

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Forward (+)
33363923 .. 33371073
7151 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0209500.1

Sequence Viewer

Length: 4149 bp
ATGGGTCGGAAGAAGCCGACTGCTCGTGACGAAGAGAATCCGCCGCCAGCGGGTGGTGGTGGAGGAAAATCTAAGAAGAAGAACCTGGTGATCGAAGACGACGAGTATTCCGTCGCAACTGAGCTATCCGAGGAGAGTCAAGTCCTGGAAGAGAAGGTTCCTCCGCCTAGTAAAGGGAAGAAGGGCAAAAAGGGGAGTTCTAAAGCTTCAAAGGGAGTGGATGAGGACTTGGACGATGCTGAGGAAGATGCAGATGAGGTTCCCCAAGTGGTTTTCACTGGGAAGAAGAAGGGCAAGTCGAAGAAGAGCGGCGGGAGTAGCGCGTTCAGCTCGTCCAGTTTCGGGTTGCTTGAGGATGAGGATGATAAGGATGCTGAGGATGATGAACAGTCTGGTTTAACAGGTGATGATGAGGAGGAGGATGCTCCTGCGTTGAGATTTTCGGGGAAGAAGAAGCCTTCAAAGTCGTCCAAGAAAACCGGGGCTAGTTCGTTTACAGGGTCGGCTTTTGATGCCATTGGTGACGAAGGGGATAGTGATGGCGCGGTTGATGATGAGAGTAATGCAGCTGAAGATCATGAGAATGACGATGAGCCTGCAATTGCTTTTACAGGGAAGAAGAAGGCTTCCAAGGCTGGAAAGAAGGGTGGGAGTGTGTTTGCAGCAGCCAGCTTTAGTGCCCTTGATGATGCGGAGGAGGATAAGGATGAAAAAAACGATGAGGATGACGACATTCCTCAGATTACTTTCTCTGGTAAGAAAAAGAAGTCATCAAAGGCTTCAAAGAAGAGTGGCGGTAATTCTTTTAGCGCAGCATTGCTTGATGAGGAAGATGATGAAGATACTTCCGTTTCCAAACCAACTAGTGCCGGTGATGATACAGTTGAGGATGAAGATGCATCTATGATAACATTCACAGGTAAGAAGAAGTCTTCAAAGAAGAAAGGTAATAGTGTGTTTACTGCACTGGGTGAAGATGCTGGGGTTGGGAGTGAAATTACAGATGTAGTTGAGCCCAAACAACCAACTACGGGAACTAGTAAAATTGAAGCTGATAATTCTAACGTTAGTAAGAATAAAGATCCAGAACCTTCAAAAAGTAAGAAAAAGAAGAAGAAGAGTGGAAGGACTGCTCAAGAAGAGGATGATTTGGATAAGATTCTTGCAGAGCTAGGTGAGCTTTCATCGAAACCTGCTGCTCCTCAGAAAGAGGAGACGGTGGAGGTTCAGCCTGCTGATTCTCTGAAAGAGGAGAAAGTTGAGGTTCAACCTGATGTGGTTGATGGTTCTGCTGCAAAGGAAGCTGAAGAAGAGACTGTGGAGTCTGCTGCAGCAAAGAAGAAGAAAAAGAAGAAGGAAAAGGAAAAGGAGAAAAAGGCGGCAGCGGCAGCAGCAGCAGCATCTGTAGATGTCAAGGAGGAAAAACAAGAACAAGCAAAAATTGAGCCAGCAATTGAACCAAAGAAGAAGGAAGTGAAAGGCAAAGCAGCTGAAAAGAAGGTGCCGAAACATGTTAGGGAGATGCAAGAGGCCCTTGCTAGGCGACAGGAAGAAGAAGAGAAGAAGAAAAGGGAAGAAGAGGAGAAACTGAAGAAAGAAGAAGAGGAGAGGCATAAGCAGGAAGAACTTGAGAAGCAAAAGGAGGAGGCAAAGCGGAAGAAAAAGGAGAGGGAAAAGGAGAAGATCCAAGAGTTGAAGAAGGCAGGTTTATATAAAACTCCCAAGCAAAAAGAAGAGGAGAAGCGGCGGGAGCAAAAGAGACTCCAGTTACTTGCGAATTTACCTAATGCAGTGGAGGGTGTGCCTCCTCCTACCACAGACAATGAAAAACCGGCTAAAAGACCCTTGTATCAGAAAAAGAAGTCAAAACCAGCACCCAATCAGGCAAATGGTGCAGCAGCTACTACGAAGCCTGTGGAAAGCACGGAAGGAATAAAAGAAGAAAACCAGCAGGTTACTGTTCCTGAGCTGGATTCTGTGGGACTTGAGAACGATGAAGAGCAGGAATCAGTTGAAGTAGCAGAAAAGCTATCCGAAGTTTCTGAATCTGTTAAAGAGAATGGATTGGAACAAGAAGAGGATGATGGTGATGATGATGAATGGGATGCAAAGAGCTGGGATGATGATGCTGTTGTTAATCTTTCATTTAAACGTGGGTTTTCTGATGAAGAGGTTGAACCTGTTGTGAATAAAGGGATGAAGTCTGCAGTGCAGAAAACCGTTCCTTCTCAACCAATAAAACCTCATGATGTTGAGAATCAGAAAAAACAAGCTGAGGTGGAAGTTGACAAAGGTAGGAAGAAAGATGCTGGTGCAAAGAAAGAAGCACCAAATTCAGATTCTGCCTCTAAACAGAGTGAAGATAATCTTCGCTCTCCCATTTGCTGCATTATGGGCCATGTTGATACTGGTAAAACTAAGCTTCTGGATTGTATCCGAGGCACAAATGTTCAGGAGGGTGAGGCTGGAGGTATTACTCAACAGATTGGTGCTACGTATTTTCCTGCGGATAATATCCGTGAGAGGACTAAGGAACTGAAAGCTGATGCAAAGCTGAAGGTCCCAGGTCTATTGGTCATTGATACCCCTGGCCACGAGTCATTTACTAATTTAAGGTCACGGGGTTCAGGTTTATGTGATATTGCAATTTTGGTTGTTGACATTATGCATGGCTTAGAGCCTCAAACAATAGAGTCACTCAATCTCTTGAAAATGAGGAATACCGAATTCATTGTTGCATTGAATAAGGTGGACAGGCTCTATGGGTGGAAAACCTGCCGCAACCAGCCAATAGGGAAGGCAATGAAGCAACAATCCAAGGATGTAGTAAATGAGTTCAATATGAGGGTTTCTCAGATTATCACTCAATTCATGGAGCAGGGCTTAAATACTGAATTGTATTATAAGAATAAAGAAATGGGAGAAACATACAGTATTGTACCTACAAGTGCCATTAGTGGTGAAGGGATTCCAGATTTGTTATTACTATTGATTCAGTGGGCCCAGAAAACTATGGTTGAGAAACTTACTTACAGCAATGAAATTCAGTGTACGGTATTGGAGGTCAAGGTTATTGAAGGTCTTGGGACAACAATCGATGTTGTGTTGGTTAATGGCGTGCTTCATGAAGGGGATCAAATAGTCGTTTGCGGCATGCAGGGACCTATTGTTACTTCAATTCGAGCTTTGTTGACACCACATCCCATGAAAGAACTTCGTGTCAAGGGAACTTATCAGCACCATAGTCAAATCAAAGCTGCACAAGGTATCAAGATCACAGCACAGGGACTTGAACATGCTATTGCTGGCACTGCTCTATATGTTGTTGGGCCTAGCGATGACTTGGATGATATCAAGGAAACAGCTATGGAAGATATGAAATCAGTCATGAATAGGATTGACAAGAGTGGTGAGGGAGTTTGTGTACAAGCATCTACTCTAGGATCCTTGGAAGCATTGCTAGAGTTTTTGAAGACGCCAGAAGTTAATATTCCTGTTAGTGGTATTAGCATCGGCCCTGTACACAAGAAGGATGTCATGAAGGCCAGTGTAATGCTTGAAAAGAAAAAAGAGTACGCCACTATCTTGGCATTTGATGTTAAAGTGACACCTGAGGCCCGGGACCTTGCAGATGAATTGGGTGTGAAGATTTTTATTGCTGATATAATCTATCACTTGTTTGACCAATTTAAGGCCTATATCGACAATCTCAAAGAGGAAAAGAAGAAGGAAGCCGCTGATGAAGCTGTTTTTCCGTGTGTGCTCAAGATTTTACCCAACTGTGTTTTCAACAAGAAGGATCCAATTGTCTTGGGTGTTGATGTTCTTGAAGGCATTGCAAAGGTAGGGACTCCAATTTGCATTCCTCAGAGAGATTTTATTGATATTGGACGCATTGCATCCATTGAGAATAACCACAAACCTGTAGATATAGCGAAAAAGGGGCTGAAGGTGGCTATCAAGATAGTCGGCACAAATTCTGATGAGCAGCAAAAGATGTATGGTAGGCATTTTGAAATTGAAGATGAGCTTGTCAGCCATATCTCCAGGAGGTCAATTGATGTACTTAAAACAAGCTACCGGGATGAACTGTCAATTGACGAGTGGAAGCTGGTTGTGAAATTGAAGAAACTTTTTGAGATATCATGA

Protein Analysis

1382

Amino Acids

151.56

Weight (kDa)

5.19

Isoelectric Point (pI)

40.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GTP_EFTU PF00009 793 - 1002 4.5e-34 Elongation factor Tu GTP binding domain
IF-2 PF11987 1119 - 1231 3.7e-23 Translation-initiation factor 2
GTP_EFTU_D4 PF14578 1252 - 1325 1.5e-14 Elongation factor Tu domain 4
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2904
AasI GACNNNNNNGTC 1 cut(s) 1321
Acc36I ACCTGC 4 cut(s) 1201, 1694, 1942, 2783
AccB1I GGYRCC 1 cut(s) 1501
AccB7I CCANNNNNTGG 1 cut(s) 53
AccBSI CCGCTC 1 cut(s) 309
AccII CGCG 2 cut(s) 323, 545
AclI AACGTT 1 cut(s) 1065
AclWI GGATC 7 cut(s) 1076, 1678, 3141, 3438, 3451, 3794, 3807
AcoI YGGCCR 1 cut(s) 2590
AcsI RAATTY 5 cut(s) 1777, 2332, 2726, 3042, 3976
AcuI CTGAAG 5 cut(s) 591, 1326, 1610, 2576, 3968
AcyI GRCGYC 1 cut(s) 3476
AdeI CACNNNGTG 1 cut(s) 971
AfaI GTAC 6 cut(s) 2940, 3052, 3426, 3522, 3575, 4065
AfiI CCNNNNNNNGG 8 cut(s) 50, 53, 173, 342, 1031, 1539, 3500, 3691
AflIII ACRYGT 1 cut(s) 1510
AhlI ACTAGT 2 cut(s) 863, 1037
AjnI CCWGG 5 cut(s) 84, 144, 2563, 2587, 4046
AjuI GAANNNNNNNTTGG 4 cut(s) 2323, 2355, 3770, 3802
Alw21I GWGCWC 1 cut(s) 3765
Alw26I GTCTC 3 cut(s) 1208, 1307, 1753
AlwI GGATC 7 cut(s) 1076, 1678, 3141, 3438, 3451, 3794, 3807
AlwNI CAGNNNCTG 2 cut(s) 1403, 2342
Ama87I CYCGRG 1 cut(s) 3618
AoxI GGCC 9 cut(s) 1530, 2395, 2590, 3000, 3329, 3514, 3543, 3615, 3693
ApaI GGGCCC 1 cut(s) 3004
ApoI RAATTY 5 cut(s) 1777, 2332, 2726, 3042, 3976
Asp700I GAANNNNTTC 1 cut(s) 2967
AspLEI GCGC 3 cut(s) 323, 545, 812
AsuC2I CCSGG 4 cut(s) 481, 3619, 3620, 4082
AvaI CYCGRG 1 cut(s) 3618
AvaII GGWCC 3 cut(s) 2560, 3161, 3622
AxyI CCTNAGG 1 cut(s) 3612
BaeGI GKGCMC 2 cut(s) 682, 3004
BaeI ACNNNNGTAYC 4 cut(s) 834, 867, 1832, 1865
BalI TGGCCA 1 cut(s) 2592
BamHI GGATCC 2 cut(s) 3443, 3799
BanI GGYRCC 1 cut(s) 1501
BanII GRGCYC 2 cut(s) 1017, 3004
BauI CACGAG 2 cut(s) 24, 2594
BbsI GAAGAC 3 cut(s) 102, 924, 3479
Bbv12I GWGCWC 1 cut(s) 3765
BbvCI CCTCAGC 3 cut(s) 240, 375, 2274
BccI CCATC 3 cut(s) 533, 1277, 2078
BcgI CGANNNNNNTGC 2 cut(s) 578, 612
BciT130I CCWGG 5 cut(s) 86, 146, 2565, 2589, 4048
BciVI GTATCC 1 cut(s) 2444
BcnI CCSGG 4 cut(s) 481, 3619, 3620, 4082
BcoDI GTCTC 3 cut(s) 1208, 1307, 1753
BcuI ACTAGT 2 cut(s) 863, 1037
BfaI CTAG 9 cut(s) 168, 486, 864, 1038, 1172, 1539, 3333, 3440, 3461
BfmI CTRYAG 4 cut(s) 1329, 1404, 2205, 3924
BfuAI ACCTGC 4 cut(s) 1201, 1694, 1942, 2783
BfuI GTATCC 1 cut(s) 2444
Bme1390I CCNGG 9 cut(s) 86, 146, 481, 2565, 2589, 3619, 3620, 4048, 4082
Bme18I GGWCC 3 cut(s) 2560, 3161, 3622
BmeT110I CYCGRG 1 cut(s) 3618
BmiI GGNNCC 9 cut(s) 159, 261, 1503, 2562, 3002, 3162, 3445, 3623, 3801
BmrFI CCNGG 9 cut(s) 86, 146, 481, 2565, 2589, 3619, 3620, 4048, 4082
BmrI ACTGGG 2 cut(s) 288, 977
BmuI ACTGGG 2 cut(s) 288, 977
BpiI GAAGAC 3 cut(s) 102, 924, 3479
BplI GAGNNNNNCTC 2 cut(s) 2836, 2868
BpmI CTGGAG 3 cut(s) 1748, 2487, 4030
Bpu10I CCTNAGC 4 cut(s) 240, 375, 1965, 2274
BpuEI CTTGAG 5 cut(s) 371, 1119, 1649, 2006, 3749
BpuMI CCSGG 4 cut(s) 481, 3619, 3620, 4082
Bsa29I ATCGAT 1 cut(s) 3096
BsaAI YACGTR 1 cut(s) 2496
BsaHI GRCGYC 1 cut(s) 3476
BsaJI CCNNGG 9 cut(s) 129, 480, 630, 2437, 2563, 2587, 2817, 3447, 3618
BsaXI ACNNNNNCTCC 2 cut(s) 3408, 3438
Bsc4I CCNNNNNNNGG 8 cut(s) 50, 53, 173, 342, 1031, 1539, 3500, 3691
Bse118I RCCGGY 2 cut(s) 869, 1831
Bse1I ACTGG 6 cut(s) 283, 336, 972, 1765, 2413, 3546
Bse21I CCTNAGG 1 cut(s) 3612
Bse3DI GCAATG 6 cut(s) 815, 2808, 3043, 3455, 3834, 3894
BseBI CCWGG 5 cut(s) 86, 146, 2565, 2589, 4048
BseCI ATCGAT 1 cut(s) 3096
BseDI CCNNGG 9 cut(s) 129, 480, 630, 2437, 2563, 2587, 2817, 3447, 3618
BseLI CCNNNNNNNGG 8 cut(s) 50, 53, 173, 342, 1031, 1539, 3500, 3691
BseMI GCAATG 6 cut(s) 815, 2808, 3043, 3455, 3834, 3894
BseNI ACTGG 6 cut(s) 283, 336, 972, 1765, 2413, 3546
BseSI GKGCMC 2 cut(s) 682, 3004
BseYI CCCAGC 2 cut(s) 980, 2115
BsgI GTGCAG 4 cut(s) 948, 1914, 2231, 3243
Bsh1236I CGCG 2 cut(s) 323, 545
BshFI GGCC 9 cut(s) 1532, 2397, 2592, 3002, 3331, 3516, 3545, 3617, 3695
BshNI GGYRCC 1 cut(s) 1501
BshVI ATCGAT 1 cut(s) 3096
BsiHKAI GWGCWC 1 cut(s) 3765
BsiHKCI CYCGRG 1 cut(s) 3618
BsiSI CCGG 5 cut(s) 480, 870, 1832, 3619, 4081
BslFI GGGAC 7 cut(s) 1995, 2546, 3100, 3174, 3300, 3635, 3862
BslI CCNNNNNNNGG 8 cut(s) 50, 53, 173, 342, 1031, 1539, 3500, 3691
BsmAI GTCTC 3 cut(s) 1208, 1307, 1753
BsmBI CGTCTC 1 cut(s) 1208
BsmFI GGGAC 7 cut(s) 1995, 2546, 3100, 3174, 3300, 3635, 3862
BsmI GAATGC 1 cut(s) 3861
BsnI GGCC 9 cut(s) 1532, 2397, 2592, 3002, 3331, 3516, 3545, 3617, 3695
BsoBI CYCGRG 1 cut(s) 3618
Bsp120I GGGCCC 1 cut(s) 3000
Bsp1286I GDGCHC 4 cut(s) 682, 1017, 3004, 3765
Bsp1407I TGTACA 2 cut(s) 3424, 3520
Bsp143I GATC 8 cut(s) 90, 574, 1081, 1683, 3133, 3273, 3443, 3799
BspANI GGCC 9 cut(s) 1532, 2397, 2592, 3002, 3331, 3516, 3545, 3617, 3695
BspDI ATCGAT 1 cut(s) 3096
BspFNI CGCG 2 cut(s) 323, 545
BspHI TCATGA 6 cut(s) 577, 2245, 3124, 3387, 3537, 4145
BspLI GGNNCC 9 cut(s) 159, 261, 1503, 2562, 3002, 3162, 3445, 3623, 3801
BspMAI CTGCAG 2 cut(s) 1333, 2209
BspMI ACCTGC 4 cut(s) 1201, 1694, 1942, 2783
BspPI GGATC 7 cut(s) 1076, 1678, 3141, 3438, 3451, 3794, 3807
BspQI GCTCTTC 2 cut(s) 299, 1992
BspT107I GGYRCC 1 cut(s) 1501
BsrBI CCGCTC 1 cut(s) 309
BsrDI GCAATG 6 cut(s) 815, 2808, 3043, 3455, 3834, 3894
BsrFI RCCGGY 2 cut(s) 869, 1831
BsrGI TGTACA 2 cut(s) 3424, 3520
BsrI ACTGG 6 cut(s) 283, 336, 972, 1765, 2413, 3546
BssAI RCCGGY 2 cut(s) 869, 1831
BssECI CCNNGG 9 cut(s) 129, 480, 630, 2437, 2563, 2587, 2817, 3447, 3618
BssMI GATC 8 cut(s) 90, 574, 1081, 1683, 3133, 3273, 3443, 3799
BssNI GRCGYC 1 cut(s) 3476
BssSI CACGAG 2 cut(s) 24, 2594
BssT1I CCWWGG 3 cut(s) 630, 2817, 3447
Bst2BI CACGAG 2 cut(s) 24, 2594
Bst2UI CCWGG 5 cut(s) 86, 146, 2565, 2589, 4048
BstACI GRCGYC 1 cut(s) 3476
BstAPI GCANNNNNTGC 1 cut(s) 1892
BstAUI TGTACA 2 cut(s) 3424, 3520
BstBAI YACGTR 1 cut(s) 2496
BstC8I GCNNGC 8 cut(s) 48, 597, 670, 1233, 1449, 3119, 3155, 3307
BstENI CCTNNNNNAGG 1 cut(s) 171
BstFNI CGCG 2 cut(s) 323, 545
BstHHI GCGC 3 cut(s) 323, 545, 812
BstKTI GATC 8 cut(s) 93, 577, 1084, 1686, 3136, 3276, 3446, 3802
BstMAI GTCTC 3 cut(s) 1208, 1307, 1753
BstMBI GATC 8 cut(s) 90, 574, 1081, 1683, 3133, 3273, 3443, 3799
BstNI CCWGG 5 cut(s) 86, 146, 2565, 2589, 4048
BstNSI RCATGY 3 cut(s) 1514, 3157, 3299
BstSCI CCNGG 9 cut(s) 84, 144, 479, 2563, 2587, 3617, 3618, 4046, 4080
BstSFI CTRYAG 4 cut(s) 1329, 1404, 2205, 3924
BstSLI GKGCMC 2 cut(s) 682, 3004
BstSNI TACGTA 1 cut(s) 2496
BstUI CGCG 2 cut(s) 323, 545
BstV2I GAAGAC 3 cut(s) 102, 924, 3479
BstX2I RGATCY 4 cut(s) 1081, 1683, 3443, 3799
BstXI CCANNNNNNTGG 1 cut(s) 3586
BstYI RGATCY 4 cut(s) 1081, 1683, 3443, 3799
Bsu15I ATCGAT 1 cut(s) 3096
Bsu36I CCTNAGG 1 cut(s) 3612
BsuI GTATCC 1 cut(s) 2444
BsuRI GGCC 9 cut(s) 1532, 2397, 2592, 3002, 3331, 3516, 3545, 3617, 3695
BsuTUI ATCGAT 1 cut(s) 3096
BtgZI GCGATG 1 cut(s) 3351
BtsI GCAGTG 3 cut(s) 1797, 2214, 3309
BtsIMutI CAGTG 8 cut(s) 276, 965, 1797, 2214, 3002, 3053, 3309, 3553
BveI ACCTGC 4 cut(s) 1201, 1694, 1942, 2783
Cac8I GCNNGC 8 cut(s) 48, 597, 670, 1233, 1449, 3119, 3155, 3307
CaiI CAGNNNCTG 2 cut(s) 1403, 2342
CciI TCATGA 6 cut(s) 577, 2245, 3124, 3387, 3537, 4145
CfoI GCGC 3 cut(s) 323, 545, 812
Cfr10I RCCGGY 2 cut(s) 869, 1831
Cfr9I CCCGGG 1 cut(s) 3618
ClaI ATCGAT 1 cut(s) 3096
CseI GACGC 2 cut(s) 3484, 3900
CsiI ACCWGGT 1 cut(s) 84
Csp6I GTAC 6 cut(s) 2939, 3051, 3425, 3521, 3574, 4064
CspCI CAANNNNNGTGG 2 cut(s) 198, 233
CviQI GTAC 6 cut(s) 2939, 3051, 3425, 3521, 3574, 4064
DpnI GATC 8 cut(s) 92, 576, 1083, 1685, 3135, 3275, 3445, 3801
DpnII GATC 8 cut(s) 90, 574, 1081, 1683, 3133, 3273, 3443, 3799
DraI TTTAAA 1 cut(s) 2149
DraIII CACNNNGTG 1 cut(s) 971
DrdI GACNNNNNNGTC 1 cut(s) 1321
DseDI GACNNNNNNGTC 1 cut(s) 1321
EaeI YGGCCR 1 cut(s) 2590
EciI GGCGGA 2 cut(s) 30, 153
Eco105I TACGTA 1 cut(s) 2496
Eco130I CCWWGG 3 cut(s) 630, 2817, 3447
Eco147I AGGCCT 1 cut(s) 3695
Eco24I GRGCYC 2 cut(s) 1017, 3004
Eco32I GATATC 2 cut(s) 3352, 4143
Eco47I GGWCC 3 cut(s) 2560, 3161, 3622
Eco57I CTGAAG 5 cut(s) 591, 1326, 1610, 2576, 3968
Eco81I CCTNAGG 1 cut(s) 3612
Eco88I CYCGRG 1 cut(s) 3618
EcoNI CCTNNNNNAGG 1 cut(s) 171
EcoO109I RGGNCCY 4 cut(s) 1531, 2560, 3161, 3622
EcoRI GAATTC 1 cut(s) 2726
EcoRII CCWGG 5 cut(s) 84, 144, 2563, 2587, 4046
EcoRV GATATC 2 cut(s) 3352, 4143
EcoT14I CCWWGG 3 cut(s) 630, 2817, 3447
EcoT22I ATGCAT 2 cut(s) 901, 2670
EcoT38I GRGCYC 2 cut(s) 1017, 3004
ErhI CCWWGG 3 cut(s) 630, 2817, 3447
Esp3I CGTCTC 1 cut(s) 1208
FalI AAGNNNNNCTT 6 cut(s) 1518, 1550, 2352, 2384, 4014, 4046
FaqI GGGAC 7 cut(s) 1995, 2546, 3100, 3174, 3300, 3635, 3862
FauI CCCGC 3 cut(s) 43, 305, 1740
FriOI GRGCYC 2 cut(s) 1017, 3004
FspBI CTAG 9 cut(s) 168, 486, 864, 1038, 1172, 1539, 3333, 3440, 3461
GlaI GCGC 3 cut(s) 322, 544, 811
GsaI CCCAGC 2 cut(s) 984, 2119
GsuI CTGGAG 3 cut(s) 1748, 2487, 4030
HaeIII GGCC 9 cut(s) 1532, 2397, 2592, 3002, 3331, 3516, 3545, 3617, 3695
HapII CCGG 5 cut(s) 480, 870, 1832, 3619, 4081
HgaI GACGC 2 cut(s) 3484, 3900
HhaI GCGC 3 cut(s) 323, 545, 812
Hin1I GRCGYC 1 cut(s) 3476
Hin6I GCGC 3 cut(s) 321, 543, 810
HinP1I GCGC 3 cut(s) 321, 543, 810
HincII GTYRAC 3 cut(s) 2287, 2659, 3192
HindII GTYRAC 3 cut(s) 2287, 2659, 3192
HindIII AAGCTT 2 cut(s) 204, 2420
HpaII CCGG 5 cut(s) 480, 870, 1832, 3619, 4081
Hpy166II GTNNAC 9 cut(s) 495, 960, 2287, 2659, 2752, 3051, 3192, 3425, 3523
Hpy8I GTNNAC 9 cut(s) 495, 960, 2287, 2659, 2752, 3051, 3192, 3425, 3523
Hpy99I CGWCG 2 cut(s) 104, 116
HpyCH4IV ACGT 3 cut(s) 1065, 2152, 2495
HpySE526I ACGT 3 cut(s) 1065, 2152, 2495
Hsp92I GRCGYC 1 cut(s) 3476
HspAI GCGC 3 cut(s) 321, 543, 810
Kzo9I GATC 8 cut(s) 90, 574, 1081, 1683, 3133, 3273, 3443, 3799
LguI GCTCTTC 2 cut(s) 299, 1992
LmnI GCTCC 4 cut(s) 430, 1204, 1750, 2875
MabI ACCWGGT 1 cut(s) 84
MaeI CTAG 9 cut(s) 168, 486, 864, 1038, 1172, 1539, 3333, 3440, 3461
MaeII ACGT 3 cut(s) 1065, 2152, 2495
MaeIII GTNAC 8 cut(s) 26, 521, 1767, 1954, 2616, 2694, 3169, 3604
MalI GATC 8 cut(s) 92, 576, 1083, 1685, 3135, 3275, 3445, 3801
MbiI CCGCTC 1 cut(s) 309
MboI GATC 8 cut(s) 90, 574, 1081, 1683, 3133, 3273, 3443, 3799
MfeI CAATTG 5 cut(s) 600, 1452, 3804, 4056, 4095
MflI RGATCY 4 cut(s) 1081, 1683, 3443, 3799
MhlI GDGCHC 4 cut(s) 682, 1017, 3004, 3765
MlsI TGGCCA 1 cut(s) 2592
MluNI TGGCCA 1 cut(s) 2592
MlyI GAGTC 6 cut(s) 145, 1331, 1755, 2606, 2702, 3844
Mox20I TGGCCA 1 cut(s) 2592
Mph1103I ATGCAT 2 cut(s) 901, 2670
MroXI GAANNNNTTC 1 cut(s) 2967
MscI TGGCCA 1 cut(s) 2592
MslI CAYNNNNRTG 1 cut(s) 582
Msp20I TGGCCA 1 cut(s) 2592
MspA1I CMGCKG 5 cut(s) 50, 569, 1385, 1490, 3737
MspI CCGG 5 cut(s) 480, 870, 1832, 3619, 4081
MspR9I CCNGG 9 cut(s) 86, 146, 481, 2565, 2589, 3619, 3620, 4048, 4082
MunI CAATTG 5 cut(s) 600, 1452, 3804, 4056, 4095
Mva1269I GAATGC 1 cut(s) 3861
MvaI CCWGG 5 cut(s) 86, 146, 2565, 2589, 4048
MvnI CGCG 2 cut(s) 323, 545
NciI CCSGG 4 cut(s) 481, 3619, 3620, 4082
NdeII GATC 8 cut(s) 90, 574, 1081, 1683, 3133, 3273, 3443, 3799
NlaIV GGNNCC 9 cut(s) 159, 261, 1503, 2562, 3002, 3162, 3445, 3623, 3801
NmuCI GTSAC 5 cut(s) 26, 521, 2616, 2694, 3604
NsiI ATGCAT 2 cut(s) 901, 2670
NspI RCATGY 3 cut(s) 1514, 3157, 3299
PaeI GCATGC 1 cut(s) 3157
PagI TCATGA 6 cut(s) 577, 2245, 3124, 3387, 3537, 4145
PceI AGGCCT 1 cut(s) 3695
PciI ACATGT 1 cut(s) 1510
PciSI GCTCTTC 2 cut(s) 299, 1992
PcsI WCGNNNNNNNCGW 2 cut(s) 99, 108
PctI GAATGC 1 cut(s) 3861
PdmI GAANNNNTTC 1 cut(s) 2967
PflMI CCANNNNNTGG 1 cut(s) 53
PfoI TCCNGGA 2 cut(s) 144, 4046
PleI GAGTC 6 cut(s) 144, 1330, 1755, 2605, 2701, 3844
PpsI GAGTC 6 cut(s) 144, 1330, 1755, 2605, 2701, 3844
Ppu21I YACGTR 1 cut(s) 2496
PpuMI RGGWCCY 3 cut(s) 2560, 3161, 3622
PscI ACATGT 1 cut(s) 1510
PsiI TTATAA 1 cut(s) 2904
Psp1406I AACGTT 1 cut(s) 1065
Psp5II RGGWCCY 3 cut(s) 2560, 3161, 3622
Psp6I CCWGG 5 cut(s) 84, 144, 2563, 2587, 4046
PspFI CCCAGC 2 cut(s) 980, 2115
PspGI CCWGG 5 cut(s) 84, 144, 2563, 2587, 4046
PspN4I GGNNCC 9 cut(s) 159, 261, 1503, 2562, 3002, 3162, 3445, 3623, 3801
PspOMI GGGCCC 1 cut(s) 3000
PspPPI RGGWCCY 3 cut(s) 2560, 3161, 3622
PstI CTGCAG 2 cut(s) 1333, 2209
PstNI CAGNNNCTG 2 cut(s) 1403, 2342
PsuI RGATCY 4 cut(s) 1081, 1683, 3443, 3799
PvuII CAGCTG 2 cut(s) 569, 1490
RsaI GTAC 6 cut(s) 2940, 3052, 3426, 3522, 3575, 4065
RsaNI GTAC 6 cut(s) 2939, 3051, 3425, 3521, 3574, 4064
RseI CAYNNNNRTG 1 cut(s) 582
SapI GCTCTTC 2 cut(s) 299, 1992
Sau3AI GATC 8 cut(s) 90, 574, 1081, 1683, 3133, 3273, 3443, 3799
SchI GAGTC 6 cut(s) 145, 1331, 1755, 2606, 2702, 3844
ScrFI CCNGG 9 cut(s) 86, 146, 481, 2565, 2589, 3619, 3620, 4048, 4082
SduI GDGCHC 4 cut(s) 682, 1017, 3004, 3765
SexAI ACCWGGT 1 cut(s) 84
SfcI CTRYAG 4 cut(s) 1329, 1404, 2205, 3924
SinI GGWCC 3 cut(s) 2560, 3161, 3622
SmaI CCCGGG 1 cut(s) 3620
SmiMI CAYNNNNRTG 1 cut(s) 582
SmlI CTYRAG 5 cut(s) 350, 1134, 1628, 1985, 3764
SmoI CTYRAG 5 cut(s) 350, 1134, 1628, 1985, 3764
SnaBI TACGTA 1 cut(s) 2496
SpeI ACTAGT 2 cut(s) 863, 1037
SphI GCATGC 1 cut(s) 3157
SseBI AGGCCT 1 cut(s) 3695
SspI AATATT 1 cut(s) 3490
SspMI CTAG 9 cut(s) 168, 486, 864, 1038, 1172, 1539, 3333, 3440, 3461
StuI AGGCCT 1 cut(s) 3695
StyD4I CCNGG 9 cut(s) 84, 144, 479, 2563, 2587, 3617, 3618, 4046, 4080
StyI CCWWGG 3 cut(s) 630, 2817, 3447
TaiI ACGT 3 cut(s) 1068, 2155, 2498
TaqI TCGA 6 cut(s) 93, 299, 1187, 3096, 3181, 3702
TatI WGTACW 3 cut(s) 3424, 3520, 4063
TauI GCSGC 8 cut(s) 46, 312, 1382, 1388, 1747, 2781, 3153, 3737
TscAI CASTG 8 cut(s) 283, 972, 1797, 2214, 3002, 3053, 3316, 3553
TseFI GTSAC 5 cut(s) 26, 521, 2616, 2694, 3604
Tsp45I GTSAC 5 cut(s) 26, 521, 2616, 2694, 3604
TspGWI ACGGA 5 cut(s) 100, 838, 1940, 2507, 3744
TspMI CCCGGG 1 cut(s) 3618
TspRI CASTG 8 cut(s) 283, 972, 1797, 2214, 3002, 3053, 3316, 3553
Van91I CCANNNNNTGG 1 cut(s) 53
VpaK11BI GGWCC 3 cut(s) 2560, 3161, 3622
XagI CCTNNNNNAGG 1 cut(s) 171
XapI RAATTY 5 cut(s) 1777, 2332, 2726, 3042, 3976
XceI RCATGY 3 cut(s) 1514, 3157, 3299
XcmI CCANNNNNNNNNTGG 1 cut(s) 2405
XmaI CCCGGG 1 cut(s) 3618
XmnI GAANNNNTTC 1 cut(s) 2967
XspI CTAG 9 cut(s) 168, 486, 864, 1038, 1172, 1539, 3333, 3440, 3461
Zsp2I ATGCAT 2 cut(s) 901, 2670
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.