Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0005018

Physical Location & Seq

Genomic Coordinates Reverse (-)

20980816 .. 20984032

Gene Structure 3217 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g20480.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2667 bp

ATGAGGACTTTCTTTCCCTCTGAGTCTGGTAAAGAATCACAGGTTAATGCCCTCAATCCACTGTCATGGCTCCAGGTGGAAAGAGGGAAGCTTTCCAAGCTTCCATCAAACTCCTCCTCTTCTTCTATAGAATCTCTTATCAAGGTCCCCGAGCCGCCAATACTCCCGTTCTATAAACCTGTTGATTATGTCAAAGTTTTAGCTCAAATTCATGAAGAACTTGAGTTGTGTCCTCCACAGGAACAGTCGAATCTTTATCTGTTACAATTCCAGGTCTTTAGGGGCCTCGGAGAAGTCAAGCTGATGCGAAGAAGCCTTCGTGCAGCTTGGCAGAAATCTAACTCCATTCATGAGAAGCTCATATTTGGAGCATGGTTGAAGTATGAGAAGCAAGGGGAAGAGCATAGGTCCGACTTGCTTGCCAGTTGTGATAAATGTGCACAAGAATTTGGGCCAGTAGATATTTTGACTCAGCTTCCTATTGATGCAACTGTAAGTCATACACATGAGAATATTTCGATAAATGGGAACCAAATACCAAGAAATGTCAGTTTTCGAATACAAGATGAGAAAGTAGATTGTGATAGGCAGAAAATATCAAGCCTTTCTGCTCCATTTCATGCCATGCTTAATGGGTGTTTCTCGGAATCACTTCGCGAGGACATAGATTTGTCACAAAACAATATCAGTGCATCAGGTATGAGGACAATCATTGAGTTCAGTATGACAGGCAGTTTGAATGAAGTCCCTACTCATCTTTTGTTGGAAATATTAGTTTTTGCAAATAAATTTTGTTGCGAAAAGCTTAAAGATGCTTGTGACCGGAAACTTGCATCCTTTGTGTCTTCTAGAGAGGATGCGGTAGAACTCATGGCATATGCTCTTGAAGAGAACTGTCCTGTCCTTGCTGCATCATGTTTACAAGTTTTCTTAAATGATCTTCCTGATTGTTTGAATGACAACCGAGTGGTGGATATATTCAGGCATGCTGATAGACAACAGAGATCGATCATGGTTGGGCAAGCCTCGTTTTCGCTATACTGTTTATTAAGTGAAGTTTGTATGAACCTTGATCCGCAGTTGGATAAAACAGCTTGTTTCCTGGAACGATTGGTAGAGTTTTCTGAAAATGATAGACAAAGAATGCTGGCATTCCATCAGTTGGGATGCCTGAGGCTCTTGAGAAAAGAGTATGACGAAGCTAAGCGCCTTTTTGAAGAAGCTTTAAATGCAGGCCATATATACTCAGTAGCAGGATTAGCGAGACTGAGTTACATTAAGGGCCATAAACTTTGGTCATATGAAAAGCTTAGCTCTGTAATCTGCGCTGTTACACCGCTTGGATGGATGTATCAGGAGAGGTCCTTGTACTGTGAAGGTGATAAGAGATGGGAAGACCTTGAGAAAGCATCTGAGCTGGATCCAACTCTTACTTACCCTTACATGTATCGTGCGGCTACATTAATGAGAAACCAGAATGTTCAAGCTGCACTTGCAGAAATTAATTGGGTTCTGGGGTTTAAACTTGCATTAGAATGCTTGGAACTCCGGTTTTGTTTCTATCTTGCTCTTGAGGACTATAAATCAGCCATTTGTGATGTTCAAGCAATTCTGACTCTCTCCCCGGATTATAGAATGTTTGAGGGACGGGTGGCAGCATCCCAATTTCGCACACTTGTGCGTGAGCATGTAGAAAATTGGACAACGGCAGATTGTTGGCTGCAATTGTACAATCGTTGGTCTTCAGTCGATGATATTGGATCCCTCTCAGTTATTTACCAGATGCTTGAATCTGATGCAGCAAAAGGTGTTCTGTATTTCAGACAGTCATTGCTTCTTCTCAGGTTGAACTGTCCCGAAGCAGCAATGCGAAGTTTACAATTAGCTCGTCAACATGCATCCAGCGATGATGAAAAGTTGGTTTATGAGGGGTGGATCTTATACGATACAGGCCATTGCGAGGAAGGGCTCTGGAAAGCAGAGGAATCTATCAGAATTAAAAGATCCTTTGAGGCTTTCTTTCTGAAAGCCTATGCACTGGCAGACTCTAGCCAGGATCCATCCTCTTCATCGACTGTTGTATCCCTCCTCGAAGATGCCTTGAAGTGCCCATCTGACAGGTTGCGTAAGGGTCAAGCACTCAACAACCTTGGAAGTGTTTATGTTGATCGTGGGAAGTTAGACTTGGCAGCTGATTGCTACATAAATGCTCTAAAGATCAGGCATACCCGAGCACACCAGGGCCTTGCTCGGGTTCATTTTCTCAGAGATGACAAGTCTGCTGCATATGAGGAAATGAGCAAACTGATTGAGAAGGCCCGGAACAATGCATCTGCCTACGAGAAGAGGTCCGAATACTGTGATCGCGAACTCACAAAGACTGATCTGGAGATGGTCACCCGCTTAGATCCGCTTCGGGTGTACCCTTACAGATATAGAGCTGCAGTGTTAATGGATAGCCACAAAGAAGCAGAGGCCATTGCAGAACTATCAAGGGCAATTGCATTCAAAGCGGACCTTCACCTTCTGCACTTACGGGCGGCATTCCATGAGCACGTTGGAGACGTCGTGGGTGCTTTGCAAGACTGTCGAGCCGCTCTCTCTGTCGATCCGAACCATCAAGAGATGCTGGAGCTTCATAGCCGTGTAAACAGCCATGAACCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0006521 GO:0008150 GO:0009889 GO:0010364 GO:0010565 GO:0010817 GO:0019222 GO:0031323 GO:0031326 GO:0031335 GO:0032350 GO:0033238 GO:0042762 GO:0046885 GO:0050789 GO:0050794 GO:0051171 GO:0062012 GO:0065007 GO:0065008 GO:0080090 GO:1900908 GO:1900911

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB TPR_8

Protein Analysis

889

Amino Acids

101.31

Weight (kDa)

5.71

Isoelectric Point (pI)

47.82

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005018)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02680
fragaria_vesca	FvH4_2g23020 FvH4_2g23020 FvH4_2g23020 FvH4_2g23020 FvH4_2g23020 FvH4_2g23020 FvH4_2g23020
malus_domestica	MD03G1258600.v1.1 MD11G1279200.v1.1
prunus_persica	Prupe.8G235100_v2.0.a1 Prupe.8G235100_v2.0.a1 Prupe.8G235100_v2.0.a1 Prupe.8G235100_v2.0.a1 Prupe.8G235100_v2.0.a1
pyrus_communis	pycom03g20480 pycom03g20560
rosa_chinensis	RchiOBHm_Chr6g0290061
rosa_laevigata	RLG00000012249
rosa_multiflora	Rmu_sc0002902.1_g000038
rosa_roxburghii	Rroxscaffold_7G00177380
rosa_rugosa	Rorug06G0209200 Rorug06G0209300 Rorug06G0209400 Rorug06G0209500
rosa_samantha	Rh6AG320100 Rh6BG327300 Rh6CG333000 Rh6DG318900
rosa_wichuraiana	Rw6G027620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	2568
AccB7I	CCANNNNNTGG	1 cut(s)	1162
AccBSI	CCGCTC	1 cut(s)	2597
AccII	CGCG	2 cut(s)	657, 2367
AcsI	RAATTY	3 cut(s)	207, 446, 788
AcuI	CTGAAG	1 cut(s)	1728
AcyI	GRCGYC	1 cut(s)	2565
AfaI	GTAC	3 cut(s)	1370, 1730, 2423
AfiI	CCNNNNNNNGG	4 cut(s)	970, 1162, 1960, 2251
AflIII	ACRYGT	1 cut(s)	1443
AjnI	CCWGG	5 cut(s)	72, 270, 1101, 2052, 2238
AjuI	GAANNNNNNNTTGG	2 cut(s)	2168, 2200
AleI	CACNNNNGTG	1 cut(s)	1676
Alw21I	GWGCWC	3 cut(s)	442, 2236, 2556
Alw26I	GTCTC	2 cut(s)	1258, 2556
Alw44I	GTGCAC	1 cut(s)	438
Ama87I	CYCGRG	3 cut(s)	149, 2229, 2250
AoxI	GGCC	8 cut(s)	283, 452, 1234, 1282, 1951, 2242, 2316, 2475
ApaLI	GTGCAC	1 cut(s)	438
ApoI	RAATTY	3 cut(s)	207, 446, 788
ArsI	GACNNNNNNTTYG	2 cut(s)	718, 750
AseI	ATTAAT	2 cut(s)	1463, 1503
Asp700I	GAANNNNTTC	1 cut(s)	651
AspLEI	GCGC	2 cut(s)	1209, 1328
AsuC2I	CCSGG	2 cut(s)	1625, 2320
AsuHPI	GGTGA	3 cut(s)	1391, 2389, 2513
AsuII	TTCGAA	1 cut(s)	556
AvaI	CYCGRG	3 cut(s)	149, 2229, 2250
AvaII	GGWCC	5 cut(s)	145, 408, 1362, 2349, 2515
AxyI	CCTNAGG	1 cut(s)	1172
BaeGI	GKGCMC	2 cut(s)	442, 2111
BaeI	ACNNNNGTAYC	2 cut(s)	2064, 2097
BamHI	GGATCC	3 cut(s)	1420, 1760, 2056
BanII	GRGCYC	1 cut(s)	1971
BbsI	GAAGAC	3 cut(s)	837, 1401, 1734
Bbv12I	GWGCWC	3 cut(s)	442, 2236, 2556
BccI	CCATC	8 cut(s)	112, 1164, 1338, 1383, 2068, 2119, 2386, 2625
BceAI	ACGGC	2 cut(s)	1722, 2628
BcgI	CGANNNNNNTGC	4 cut(s)	401, 435, 2570, 2604
BciT130I	CCWGG	5 cut(s)	74, 272, 1103, 2054, 2240
BciVI	GTATCC	1 cut(s)	2092
BcnI	CCSGG	2 cut(s)	1625, 2320
BcoDI	GTCTC	2 cut(s)	1258, 2556
BfaI	CTAG	2 cut(s)	849, 2049
BfmI	CTRYAG	2 cut(s)	126, 2442
BfoI	RGCGCY	1 cut(s)	1210
BfuI	GTATCC	1 cut(s)	2092
BlpI	GCTNAGC	2 cut(s)	1203, 1310
Bme1390I	CCNGG	7 cut(s)	74, 272, 1103, 1625, 2054, 2240, 2320
Bme18I	GGWCC	5 cut(s)	145, 408, 1362, 2349, 2515
BmeT110I	CYCGRG	3 cut(s)	149, 2229, 2250
BmiI	GGNNCC	7 cut(s)	71, 147, 284, 530, 1422, 1762, 2058
BmrFI	CCNGG	7 cut(s)	74, 272, 1103, 1625, 2054, 2240, 2320
BpiI	GAAGAC	3 cut(s)	837, 1401, 1734
BplI	GAGNNNNNCTC	2 cut(s)	2583, 2615
BpmI	CTGGAG	3 cut(s)	56, 2408, 2651
Bpu1102I	GCTNAGC	2 cut(s)	1203, 1310
Bpu14I	TTCGAA	1 cut(s)	556
BpuEI	CTTGAG	4 cut(s)	242, 1201, 1421, 1592
BpuMI	CCSGG	2 cut(s)	1625, 2320
Bsa29I	ATCGAT	1 cut(s)	1007
BsaHI	GRCGYC	1 cut(s)	2565
BsaJI	CCNNGG	4 cut(s)	286, 1623, 2149, 2239
BsaWI	WCCGGW	2 cut(s)	822, 1548
BsaXI	ACNNNNNCTCC	2 cut(s)	2553, 2583
Bsc4I	CCNNNNNNNGG	4 cut(s)	970, 1162, 1960, 2251
Bse1I	ACTGG	3 cut(s)	423, 455, 2043
Bse21I	CCTNAGG	1 cut(s)	1172
Bse3DI	GCAATG	4 cut(s)	1829, 1872, 1954, 2478
BseBI	CCWGG	5 cut(s)	74, 272, 1103, 2054, 2240
BseCI	ATCGAT	1 cut(s)	1007
BseDI	CCNNGG	4 cut(s)	286, 1623, 2149, 2239
BseGI	GGATG	8 cut(s)	833, 862, 1172, 1349, 1353, 1658, 1898, 2060
BseLI	CCNNNNNNNGG	4 cut(s)	970, 1162, 1960, 2251
BseMI	GCAATG	4 cut(s)	1829, 1872, 1954, 2478
BseMII	CTCAG	9 cut(s)	12, 485, 1163, 1259, 1260, 1404, 1782, 1855, 2278
BseNI	ACTGG	3 cut(s)	423, 455, 2043
BseRI	GAGGAG	3 cut(s)	103, 106, 2078
BseSI	GKGCMC	2 cut(s)	442, 2111
BsgI	GTGCAG	3 cut(s)	342, 1473, 2513
Bsh1236I	CGCG	2 cut(s)	657, 2367
BshFI	GGCC	8 cut(s)	285, 454, 1236, 1284, 1953, 2244, 2318, 2477
BshVI	ATCGAT	1 cut(s)	1007
BsiHKAI	GWGCWC	3 cut(s)	442, 2236, 2556
BsiHKCI	CYCGRG	3 cut(s)	149, 2229, 2250
BsiSI	CCGG	4 cut(s)	823, 1549, 1625, 2320
BslFI	GGGAC	4 cut(s)	131, 731, 1659, 1839
BslI	CCNNNNNNNGG	4 cut(s)	970, 1162, 1960, 2251
BsmAI	GTCTC	2 cut(s)	1258, 2556
BsmBI	CGTCTC	1 cut(s)	2556
BsmFI	GGGAC	4 cut(s)	131, 731, 1659, 1839
BsmI	GAATGC	5 cut(s)	1149, 1151, 1541, 2504, 2543
BsnI	GGCC	8 cut(s)	285, 454, 1236, 1284, 1953, 2244, 2318, 2477
BsoBI	CYCGRG	3 cut(s)	149, 2229, 2250
Bsp119I	TTCGAA	1 cut(s)	556
Bsp1286I	GDGCHC	5 cut(s)	442, 1971, 2111, 2236, 2556
Bsp1407I	TGTACA	1 cut(s)	1728
Bsp1720I	GCTNAGC	2 cut(s)	1203, 1310
Bsp68I	TCGCGA	2 cut(s)	657, 2367
BspANI	GGCC	8 cut(s)	285, 454, 1236, 1284, 1953, 2244, 2318, 2477
BspCNI	CTCAG	9 cut(s)	13, 484, 1164, 1259, 1260, 1405, 1781, 1854, 2277
BspDI	ATCGAT	1 cut(s)	1007
BspFNI	CGCG	2 cut(s)	657, 2367
BspHI	TCATGA	2 cut(s)	211, 349
BspLI	GGNNCC	7 cut(s)	71, 147, 284, 530, 1422, 1762, 2058
BspMAI	CTGCAG	1 cut(s)	2446
BspQI	GCTCTTC	1 cut(s)	393
BspT104I	TTCGAA	1 cut(s)	556
BsrBI	CCGCTC	1 cut(s)	2597
BsrDI	GCAATG	4 cut(s)	1829, 1872, 1954, 2478
BsrGI	TGTACA	1 cut(s)	1728
BsrI	ACTGG	3 cut(s)	423, 455, 2043
BssECI	CCNNGG	4 cut(s)	286, 1623, 2149, 2239
BssNI	GRCGYC	1 cut(s)	2565
BssT1I	CCWWGG	1 cut(s)	2149
Bst2UI	CCWGG	5 cut(s)	74, 272, 1103, 2054, 2240
Bst6I	CTCTTC	5 cut(s)	124, 393, 882, 2071, 2339
BstACI	GRCGYC	1 cut(s)	2565
BstAUI	TGTACA	1 cut(s)	1728
BstBI	TTCGAA	1 cut(s)	556
BstC8I	GCNNGC	5 cut(s)	420, 987, 1023, 1149, 1234
BstEII	GGTNACC	1 cut(s)	2395
BstF5I	GGATG	8 cut(s)	833, 862, 1172, 1349, 1353, 1658, 1898, 2060
BstFNI	CGCG	2 cut(s)	657, 2367
BstH2I	RGCGCY	1 cut(s)	1210
BstHHI	GCGC	2 cut(s)	1209, 1328
BstMAI	GTCTC	2 cut(s)	1258, 2556
BstMWI	GCNNNNNNNGC	5 cut(s)	97, 1229, 1259, 1493, 2510
BstNI	CCWGG	5 cut(s)	74, 272, 1103, 2054, 2240
BstNSI	RCATGY	4 cut(s)	989, 1447, 1691, 1898
BstPI	GGTNACC	1 cut(s)	2395
BstSCI	CCNGG	7 cut(s)	72, 270, 1101, 1623, 2052, 2238, 2318
BstSFI	CTRYAG	2 cut(s)	126, 2442
BstSLI	GKGCMC	2 cut(s)	442, 2111
BstUI	CGCG	2 cut(s)	657, 2367
BstV2I	GAAGAC	3 cut(s)	837, 1401, 1734
BstX2I	RGATCY	6 cut(s)	1420, 1760, 1935, 2003, 2056, 2407
BstXI	CCANNNNNNTGG	1 cut(s)	66
BstYI	RGATCY	6 cut(s)	1420, 1760, 1935, 2003, 2056, 2407
Bsu15I	ATCGAT	1 cut(s)	1007
Bsu36I	CCTNAGG	1 cut(s)	1172
BsuI	GTATCC	1 cut(s)	2092
BsuRI	GGCC	8 cut(s)	285, 454, 1236, 1284, 1953, 2244, 2318, 2477
BsuTUI	ATCGAT	1 cut(s)	1007
BtgZI	GCGATG	1 cut(s)	1920
BtsCI	GGATG	8 cut(s)	833, 862, 1172, 1349, 1353, 1658, 1898, 2060
BtsI	GCAGTG	1 cut(s)	2451
BtsIMutI	CAGTG	4 cut(s)	59, 694, 2036, 2451
BtuMI	TCGCGA	2 cut(s)	657, 2367
Cac8I	GCNNGC	5 cut(s)	420, 987, 1023, 1149, 1234
CciI	TCATGA	2 cut(s)	211, 349
CfoI	GCGC	2 cut(s)	1209, 1328
ClaI	ATCGAT	1 cut(s)	1007
Csp6I	GTAC	3 cut(s)	1369, 1729, 2422
CviQI	GTAC	3 cut(s)	1369, 1729, 2422
DraI	TTTAAA	2 cut(s)	1227, 1522
Eam1104I	CTCTTC	5 cut(s)	124, 393, 882, 2071, 2339
EarI	CTCTTC	5 cut(s)	124, 393, 882, 2071, 2339
Eco130I	CCWWGG	1 cut(s)	2149
Eco24I	GRGCYC	1 cut(s)	1971
Eco47I	GGWCC	5 cut(s)	145, 408, 1362, 2349, 2515
Eco57I	CTGAAG	1 cut(s)	1728
Eco81I	CCTNAGG	1 cut(s)	1172
Eco88I	CYCGRG	3 cut(s)	149, 2229, 2250
Eco91I	GGTNACC	1 cut(s)	2395
EcoO109I	RGGNCCY	4 cut(s)	145, 283, 1362, 2242
EcoO65I	GGTNACC	1 cut(s)	2395
EcoRII	CCWGG	5 cut(s)	72, 270, 1101, 2052, 2238
EcoT14I	CCWWGG	1 cut(s)	2149
EcoT22I	ATGCAT	2 cut(s)	1900, 2332
EcoT38I	GRGCYC	1 cut(s)	1971
ErhI	CCWWGG	1 cut(s)	2149
Esp3I	CGTCTC	1 cut(s)	2556
FalI	AAGNNNNNCTT	6 cut(s)	1476, 1508, 2168, 2200, 2502, 2534
FaqI	GGGAC	4 cut(s)	131, 731, 1659, 1839
FauI	CCCGC	1 cut(s)	2408
FauNDI	CATATG	3 cut(s)	877, 1300, 2287
FokI	GGATG	8 cut(s)	820, 869, 1179, 1356, 1360, 1645, 1885, 2047
FriOI	GRGCYC	1 cut(s)	1971
FspBI	CTAG	2 cut(s)	849, 2049
GlaI	GCGC	2 cut(s)	1208, 1327
GsuI	CTGGAG	3 cut(s)	56, 2408, 2651
HaeII	RGCGCY	1 cut(s)	1210
HaeIII	GGCC	8 cut(s)	285, 454, 1236, 1284, 1953, 2244, 2318, 2477
HapII	CCGG	4 cut(s)	823, 1549, 1625, 2320
HhaI	GCGC	2 cut(s)	1209, 1328
Hin1I	GRCGYC	1 cut(s)	2565
Hin6I	GCGC	2 cut(s)	1207, 1326
HinP1I	GCGC	2 cut(s)	1207, 1326
HincII	GTYRAC	1 cut(s)	1892
HindII	GTYRAC	1 cut(s)	1892
HindIII	AAGCTT	5 cut(s)	89, 98, 803, 1221, 1307
HpaII	CCGG	4 cut(s)	823, 1549, 1625, 2320
HphI	GGTGA	3 cut(s)	1391, 2389, 2513
Hpy166II	GTNNAC	6 cut(s)	440, 920, 1877, 1892, 2422, 2650
Hpy8I	GTNNAC	6 cut(s)	440, 920, 1877, 1892, 2422, 2650
Hpy99I	CGWCG	1 cut(s)	2570
HpyAV	CCTTC	6 cut(s)	326, 1370, 1958, 2308, 2528, 2534
HpyCH4IV	ACGT	2 cut(s)	2556, 2565
HpyF10VI	GCNNNNNNNGC	5 cut(s)	97, 1229, 1259, 1493, 2510
HpySE526I	ACGT	2 cut(s)	2556, 2565
Hsp92I	GRCGYC	1 cut(s)	2565
HspAI	GCGC	2 cut(s)	1207, 1326
LguI	GCTCTTC	1 cut(s)	393
LmnI	GCTCC	4 cut(s)	75, 368, 616, 2632
MaeI	CTAG	2 cut(s)	849, 2049
MaeII	ACGT	2 cut(s)	2556, 2565
MaeIII	GTNAC	6 cut(s)	261, 672, 818, 1271, 1330, 2395
MbiI	CCGCTC	1 cut(s)	2597
MfeI	CAATTG	2 cut(s)	1724, 2499
MflI	RGATCY	6 cut(s)	1420, 1760, 1935, 2003, 2056, 2407
MhlI	GDGCHC	5 cut(s)	442, 1971, 2111, 2236, 2556
MlyI	GAGTC	4 cut(s)	32, 463, 1609, 2039
MmeI	TCCRAC	5 cut(s)	435, 744, 1062, 1448, 2539
Mph1103I	ATGCAT	2 cut(s)	1900, 2332
MroXI	GAANNNNTTC	1 cut(s)	651
MslI	CAYNNNNRTG	5 cut(s)	64, 504, 1534, 1676, 2643
MspA1I	CMGCKG	1 cut(s)	2192
MspI	CCGG	4 cut(s)	823, 1549, 1625, 2320
MspR9I	CCNGG	7 cut(s)	74, 272, 1103, 1625, 2054, 2240, 2320
MssI	GTTTAAAC	1 cut(s)	1522
MunI	CAATTG	2 cut(s)	1724, 2499
Mva1269I	GAATGC	5 cut(s)	1149, 1151, 1541, 2504, 2543
MvaI	CCWGG	5 cut(s)	74, 272, 1103, 2054, 2240
MvnI	CGCG	2 cut(s)	657, 2367
MwoI	GCNNNNNNNGC	5 cut(s)	97, 1229, 1259, 1493, 2510
NciI	CCSGG	2 cut(s)	1625, 2320
NdeI	CATATG	3 cut(s)	877, 1300, 2287
NlaIV	GGNNCC	7 cut(s)	71, 147, 284, 530, 1422, 1762, 2058
NmuCI	GTSAC	3 cut(s)	672, 818, 2395
NruI	TCGCGA	2 cut(s)	657, 2367
NsiI	ATGCAT	2 cut(s)	1900, 2332
NspI	RCATGY	4 cut(s)	989, 1447, 1691, 1898
NspV	TTCGAA	1 cut(s)	556
OliI	CACNNNNGTG	1 cut(s)	1676
PaeI	GCATGC	1 cut(s)	989
PagI	TCATGA	2 cut(s)	211, 349
PciI	ACATGT	1 cut(s)	1443
PciSI	GCTCTTC	1 cut(s)	393
PcsI	WCGNNNNNNNCGW	1 cut(s)	2562
PctI	GAATGC	5 cut(s)	1149, 1151, 1541, 2504, 2543
PdmI	GAANNNNTTC	1 cut(s)	651
PfeI	GAWTC	6 cut(s)	35, 131, 250, 647, 1790, 1985
PflMI	CCANNNNNTGG	1 cut(s)	1162
PfoI	TCCNGGA	1 cut(s)	1101
PleI	GAGTC	4 cut(s)	31, 463, 1609, 2039
PmeI	GTTTAAAC	1 cut(s)	1522
PpsI	GAGTC	4 cut(s)	31, 463, 1609, 2039
PpuMI	RGGWCCY	2 cut(s)	145, 1362
PscI	ACATGT	1 cut(s)	1443
PshBI	ATTAAT	2 cut(s)	1463, 1503
Psp5II	RGGWCCY	2 cut(s)	145, 1362
Psp6I	CCWGG	5 cut(s)	72, 270, 1101, 2052, 2238
PspEI	GGTNACC	1 cut(s)	2395
PspGI	CCWGG	5 cut(s)	72, 270, 1101, 2052, 2238
PspN4I	GGNNCC	7 cut(s)	71, 147, 284, 530, 1422, 1762, 2058
PspPPI	RGGWCCY	2 cut(s)	145, 1362
PstI	CTGCAG	1 cut(s)	2446
PsuI	RGATCY	6 cut(s)	1420, 1760, 1935, 2003, 2056, 2407
PvuII	CAGCTG	1 cut(s)	2192
RruI	TCGCGA	2 cut(s)	657, 2367
RsaI	GTAC	3 cut(s)	1370, 1730, 2423
RsaNI	GTAC	3 cut(s)	1369, 1729, 2422
RseI	CAYNNNNRTG	5 cut(s)	64, 504, 1534, 1676, 2643
SapI	GCTCTTC	1 cut(s)	393
SchI	GAGTC	4 cut(s)	32, 463, 1609, 2039
ScrFI	CCNGG	7 cut(s)	74, 272, 1103, 1625, 2054, 2240, 2320
SduI	GDGCHC	5 cut(s)	442, 1971, 2111, 2236, 2556
SfcI	CTRYAG	2 cut(s)	126, 2442
SfuI	TTCGAA	1 cut(s)	556
SinI	GGWCC	5 cut(s)	145, 408, 1362, 2349, 2515
SmiMI	CAYNNNNRTG	5 cut(s)	64, 504, 1534, 1676, 2643
SmlI	CTYRAG	4 cut(s)	221, 1180, 1400, 1571
SmoI	CTYRAG	4 cut(s)	221, 1180, 1400, 1571
SphI	GCATGC	1 cut(s)	989
SspI	AATATT	2 cut(s)	514, 771
SspMI	CTAG	2 cut(s)	849, 2049
StyD4I	CCNGG	7 cut(s)	72, 270, 1101, 1623, 2052, 2238, 2318
StyI	CCWWGG	1 cut(s)	2149
TaiI	ACGT	2 cut(s)	2559, 2568
TaqI	TCGA	9 cut(s)	248, 518, 556, 1007, 1749, 2072, 2091, 2590, 2607
TatI	WGTACW	2 cut(s)	1368, 1728
TauI	GCSGC	4 cut(s)	157, 1457, 2543, 2597
TfiI	GAWTC	6 cut(s)	35, 131, 250, 647, 1790, 1985
TscAI	CASTG	4 cut(s)	66, 694, 2043, 2451
TseFI	GTSAC	3 cut(s)	672, 818, 2395
Tsp45I	GTSAC	3 cut(s)	672, 818, 2395
TspRI	CASTG	4 cut(s)	66, 694, 2043, 2451
Van91I	CCANNNNNTGG	1 cut(s)	1162
VneI	GTGCAC	1 cut(s)	438
VpaK11BI	GGWCC	5 cut(s)	145, 408, 1362, 2349, 2515
VspI	ATTAAT	2 cut(s)	1463, 1503
XapI	RAATTY	3 cut(s)	207, 446, 788
XbaI	TCTAGA	1 cut(s)	848
XceI	RCATGY	4 cut(s)	989, 1447, 1691, 1898
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2555
XmnI	GAANNNNTTC	1 cut(s)	651
XspI	CTAG	2 cut(s)	849, 2049
ZraI	GACGTC	1 cut(s)	2566
Zsp2I	ATGCAT	2 cut(s)	1900, 2332

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.