Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0005018

Physical Location & Seq

Genomic Coordinates Reverse (-)

52131043 .. 52134538

Gene Structure 3496 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG318900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2703 bp

ATGAGGACCTTCTTTCCCTCCGAGTCTTGTAAAGAGTCGCAGCTCAATGCTCTCAATCCACAGTCTTGGCTCCAAGTCGAAAGAGGGAAGGTTTCCAAGCTTTCATCAAACTCAAACTCAAACTCCTCCTCCTCCTCCTCCTCCTCCTTCCGTTCATATTCTTCTATAGAATCTCTTATAAAGGTGCCCGAGCCGCCTATACTCCCATTCTATAAGCCAGTTGATTATGTGGAGGTTTTAGCTCAAATTCATGAAGAACTTGAGTTGTGTCCTCCACAGGAGCAGTCAAATCTTTATTTGTTACAATTCCAGGTCTTTAGGGGCCTTGGAGAAGTCAAGCTGATGCGGAGAAGCCTCCGTGCAGCTTGGCAGAAAGCCAACAGTGTTCATGAGAAGCTCGTATTTGCAGCATGGTTGAAGTATGAGAAGCAAGGGGAAGATCATATTTCTGACTTGCTTTCCTCTTGTGGAAAATGTGCACAGGAGTTTGGGCCAGTAGATGTTTTAGCTCAGTTTCCTGTTGATGGTGAGGCTAGTACCCATCAGACTATCTCAATGGGTGGGAACAAGATGTCAAGAAATGTCAGTTTTAAAATCGAGGATGAGAAAATAGTCTGTGATAGGCAGAAAATATCCAGCCTTTCGGCTCCATTTGATGCCATGCTTAATGGGTGCTTCTCAGAATCACTTAGCGAGGACATAGATTTGTCAAAAAACAATATCTCTGCATCTGGTATGAAGGAAATCAATGAGTTCAGTAAAACAGGCAGTTTGGGTGAAGTCCCTCCACATCTTTTGTTGGAAATATTAGCTTTTGCTAATAAATTTTGTTGCGAAAAGCTCAAAGATGCTTGTGACAGGAAACTTGCTTCCTTGGTGTCTTCTAGAGATGATGCAGTGGAACTCATGGAGTATGCACTTGAAGAGAACTGTCGTGTCCTTGCTGCATCATGTTTACAAGTTTTCTTGGAAGATCTTCCTAATTGTTTGAATGACGACCGGGTGGTGGAGCTGTTCAAGCATGCTGATAGAGAGCAAAGATCGATCATGGTTGGACCAGGCTCATTTTCACTGTACTGTTTATTAAGTGAAGTTGCTATGAACATTGATCCTCAGTCAGATAAAACAGCTTGTTTTCTGGAACGGTTGGTAGAGTTTTCTGAAAATGATAGGCAAAGACTGCTGGCATCTCATCAGTTGGGATGTCTGAGGCTCTTGAGAAAAGAGTATGATGAAGCGAAGCGTCTCTTTGACGAAGCTTTAACTGCAGGCCATATTTATTCAGTTGCAGGTTTAGCTAGACTGGATTACATCAAAGGACATAAAGTATGGTCATATGAAAAGCTGAGCTCTGTGATCAACTCTGTTATTCCTCTTGGATGGATGTACCAGGAGAGGTCATTATACTGTGAAGATGATAAGAAATGGGAAGACCTTGAGAAAGCATCTGAATTGGACCCAACTCTTACTTATCCATACATGTATCGGGCAGCTACACTAATGAGAAAAAACAACTCTCAAGCTGCACTTGCAGAAATTAATCGGGTTCTTGGGTTTAAACTTGCATTGGATTGCTTGGAGCTCCGTTTTTGTTTCTACCTCACTCTTGAGGATTATAAATCAGCCATTTGTGACGTTCAAGCAATACTTACTCTCTGCCCAGATTATAAGATGTTGGAGGGACGGGTTGCAGCATCCCAACTTCGTACACTTGTCCGTGAGCATGTTGAAAATTGGACAACAGCAGATTGTTGGTTGCAACTGTATGATAGGTGGTCTTCAGTTGATGATATTGGGTCCCTCTCTGTTATTTACCAGATGCTTGAATCTGATGAGGCAAAAGGTGTTCTCTATTTCAGACAGTCTTTGCTCCTCCTCAGGTTGAACTGTCCTGAAGCTGCGATGCGGAGTTTACAATTAGCTCGTCAACATGCATCCAGCGAACATGAAAAGTTGGTGTATGAGGGATGGATCTTATACGACACAGGCCACTGTGAGGAAGGGCTCCGTAAAGCTGAAGAATCTATCAAAATTGAAAGATCCTTTGAGGCCTTTTTCTTGAAAGCATATGCACTGGCAGACTCTAGCCAAGATCCATCCTGTTCCTCAACTGTTGTTTCTCTCCTAGAAGACGCCTTGAAGTGCCGCTCAGACAGGTTGCGGAAAGGCCAGGCGCTAAATAACCTTGGAAGTGTTTATGTTGACTGTGGGAAGTTAGAGTTGGCAGCTGATTGCTACATTAATGCTCTTAAGATCAGGCATACCCGAGCCCACCAGGGCCTTGCTAGGGTTCATTTTCTAAAAAACGACAAGGCCGGTGCCTATGAAGAAATGACCAAACTGATTGAGAAAGCCCGGAATAATGCATCTGCCTATGAGAAAAGATCTGAATACTGTGATCGTGAACTCACAAAGACAGATCTGGAGATGGTCACCCGATTAGATCCACTTCGGGTATACCCTTACAGATATAGAGCTGCAGTGTTGATGGATAGCCACAAAGAAAAAGAGGCAATTGCAGAACTATCAAAGGCAATTGCATTCAAAGCTGATCTCCACCTTTTGCACTTGAGGGCTGCATTCCATGAGCACACTGGGAATGTCATGGGTGCACTGCGAGACTGTCGAGCTGCTCTTTCTGTCGACCCAAACCATCAAGAGATGCTGGAGCTTCACAGCCGTGTAAACAGCCATGAGCCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0006521 GO:0008150 GO:0009889 GO:0010364 GO:0010565 GO:0010817 GO:0019222 GO:0031323 GO:0031326 GO:0031335 GO:0032350 GO:0033238 GO:0042762 GO:0046885 GO:0050789 GO:0050794 GO:0051171 GO:0062012 GO:0065007 GO:0065008 GO:0080090 GO:1900908 GO:1900911

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB TPR_7 TPR_8

Protein Analysis

900

Amino Acids

102.15

Weight (kDa)

5.66

Isoelectric Point (pI)

48.8

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005018)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02680
fragaria_vesca	FvH4_2g23020 FvH4_2g23020 FvH4_2g23020 FvH4_2g23020 FvH4_2g23020 FvH4_2g23020 FvH4_2g23020
malus_domestica	MD03G1258600.v1.1 MD11G1279200.v1.1
prunus_persica	Prupe.8G235100_v2.0.a1 Prupe.8G235100_v2.0.a1 Prupe.8G235100_v2.0.a1 Prupe.8G235100_v2.0.a1 Prupe.8G235100_v2.0.a1
pyrus_communis	pycom03g20480 pycom03g20560
rosa_chinensis	RchiOBHm_Chr6g0290061
rosa_laevigata	RLG00000012249
rosa_multiflora	Rmu_sc0002902.1_g000038
rosa_roxburghii	Rroxscaffold_7G00177380
rosa_rugosa	Rorug06G0209200 Rorug06G0209300 Rorug06G0209400 Rorug06G0209500
rosa_samantha	Rh6AG320100 Rh6BG327300 Rh6CG333000 Rh6DG318900
rosa_wichuraiana	Rw6G027620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	179, 1617, 1668
Acc36I	ACCTGC	1 cut(s)	1280
AccB1I	GGYRCC	2 cut(s)	184, 2318
AccBSI	CCGCTC	1 cut(s)	2148
AccI	GTMKAC	2 cut(s)	2457, 2643
AciI	CCGC	5 cut(s)	194, 346, 1906, 2146, 2161
AclWI	GGATC	5 cut(s)	1103, 1979, 2034, 2087, 2438
AcsI	RAATTY	2 cut(s)	246, 824
AcuI	CTGAAG	3 cut(s)	1764, 1914, 2037
AcyI	GRCGYC	1 cut(s)	2133
AfaI	GTAC	4 cut(s)	538, 1076, 1388, 1708
AfiI	CCNNNNNNNGG	4 cut(s)	524, 1006, 1996, 2287
AflII	CTTAAG	1 cut(s)	2249
AflIII	ACRYGT	1 cut(s)	1479
AjnI	CCWGG	5 cut(s)	309, 1057, 1389, 2169, 2274
AjuI	GAANNNNNNNTTGG	2 cut(s)	2204, 2236
AleI	CACNNNNGTG	1 cut(s)	2679
Alw21I	GWGCWC	5 cut(s)	481, 1352, 1584, 2592, 2614
Alw26I	GTCTC	2 cut(s)	1250, 2613
Alw44I	GTGCAC	2 cut(s)	477, 2610
AlwI	GGATC	5 cut(s)	1103, 1979, 2034, 2087, 2438
Ama87I	CYCGRG	2 cut(s)	188, 2265
AoxI	GGCC	8 cut(s)	322, 491, 1270, 1987, 2049, 2167, 2278, 2313
ApaLI	GTGCAC	2 cut(s)	477, 2610
ApoI	RAATTY	2 cut(s)	246, 824
AseI	ATTAAT	2 cut(s)	1539, 2241
Asp700I	GAANNNNTTC	1 cut(s)	975
AspLEI	GCGC	1 cut(s)	2176
AspS9I	GGNCC	7 cut(s)	6, 322, 491, 1055, 1456, 1797, 2278
AsuC2I	CCSGG	2 cut(s)	1001, 2356
AsuHPI	GGTGA	3 cut(s)	539, 788, 2425
AvaI	CYCGRG	2 cut(s)	188, 2265
AvaII	GGWCC	4 cut(s)	6, 1055, 1456, 1797
AxyI	CCTNAGG	1 cut(s)	1877
BaeGI	GKGCMC	3 cut(s)	189, 481, 2614
BanI	GGYRCC	2 cut(s)	184, 2318
BanII	GRGCYC	4 cut(s)	1352, 1584, 2007, 2272
BbsI	GAAGAC	4 cut(s)	873, 1437, 1770, 2136
Bbv12I	GWGCWC	5 cut(s)	481, 1352, 1584, 2592, 2614
BccI	CCATC	8 cut(s)	518, 549, 1374, 1962, 2104, 2422, 2482, 2661
BceAI	ACGGC	1 cut(s)	2664
BciT130I	CCWGG	5 cut(s)	311, 1059, 1391, 2171, 2276
BclI	TGATCA	1 cut(s)	1356
BcnI	CCSGG	2 cut(s)	1001, 2356
BcoDI	GTCTC	2 cut(s)	1250, 2613
BfaI	CTAG	6 cut(s)	534, 885, 1299, 2085, 2126, 2286
BfmI	CTRYAG	3 cut(s)	165, 1266, 2478
BfoI	RGCGCY	1 cut(s)	2177
BfrI	CTTAAG	1 cut(s)	2249
BfuAI	ACCTGC	1 cut(s)	1280
BglII	AGATCT	3 cut(s)	973, 2384, 2419
BlpI	GCTNAGC	1 cut(s)	1346
Bme1390I	CCNGG	7 cut(s)	311, 1001, 1059, 1391, 2171, 2276, 2356
Bme18I	GGWCC	4 cut(s)	6, 1055, 1456, 1797
BmeT110I	CYCGRG	2 cut(s)	188, 2265
BmgT120I	GGNCC	7 cut(s)	6, 322, 491, 1055, 1456, 1797, 2278
BmiI	GGNNCC	9 cut(s)	71, 186, 323, 648, 1458, 1798, 1799, 2006, 2320
BmrFI	CCNGG	7 cut(s)	311, 1001, 1059, 1391, 2171, 2276, 2356
BmrI	ACTGGG	1 cut(s)	2604
BmuI	ACTGGG	1 cut(s)	2604
BpiI	GAAGAC	4 cut(s)	873, 1437, 1770, 2136
BpmI	CTGGAG	2 cut(s)	2444, 2687
Bpu1102I	GCTNAGC	1 cut(s)	1346
BpuEI	CTTGAG	6 cut(s)	281, 1237, 1457, 1503, 1628, 2590
BpuMI	CCSGG	2 cut(s)	1001, 2356
Bsa29I	ATCGAT	1 cut(s)	1043
BsaHI	GRCGYC	1 cut(s)	2133
BsaJI	CCNNGG	4 cut(s)	325, 873, 2185, 2275
BsaXI	ACNNNNNCTCC	4 cut(s)	107, 113, 137, 143
Bsc4I	CCNNNNNNNGG	4 cut(s)	524, 1006, 1996, 2287
Bse118I	RCCGGY	1 cut(s)	2315
Bse1I	ACTGG	5 cut(s)	218, 494, 1308, 2079, 2599
Bse21I	CCTNAGG	1 cut(s)	1877
BseBI	CCWGG	5 cut(s)	311, 1059, 1391, 2171, 2276
BseCI	ATCGAT	1 cut(s)	1043
BseDI	CCNNGG	4 cut(s)	325, 873, 2185, 2275
BseGI	GGATG	8 cut(s)	607, 1208, 1385, 1389, 1694, 1934, 1973, 2096
BseLI	CCNNNNNNNGG	4 cut(s)	524, 1006, 1996, 2287
BseMII	CTCAG	7 cut(s)	524, 693, 1127, 1199, 1337, 1891, 2163
BseNI	ACTGG	5 cut(s)	218, 494, 1308, 2079, 2599
BseRI	GAGGAG	9 cut(s)	115, 118, 121, 124, 127, 130, 133, 1862, 1865
BseSI	GKGCMC	3 cut(s)	189, 481, 2614
BsgI	GTGCAG	2 cut(s)	381, 1509
Bsh1285I	CGRYCG	1 cut(s)	1000
BshFI	GGCC	8 cut(s)	324, 493, 1272, 1989, 2051, 2169, 2280, 2315
BshNI	GGYRCC	2 cut(s)	184, 2318
BshVI	ATCGAT	1 cut(s)	1043
BsiEI	CGRYCG	1 cut(s)	1000
BsiHKAI	GWGCWC	5 cut(s)	481, 1352, 1584, 2592, 2614
BsiHKCI	CYCGRG	2 cut(s)	188, 2265
BsiSI	CCGG	3 cut(s)	1000, 2316, 2356
BslFI	GGGAC	3 cut(s)	767, 1695, 1783
BslI	CCNNNNNNNGG	4 cut(s)	524, 1006, 1996, 2287
BsmAI	GTCTC	2 cut(s)	1250, 2613
BsmBI	CGTCTC	1 cut(s)	1250
BsmFI	GGGAC	3 cut(s)	767, 1695, 1783
BsmI	GAATGC	2 cut(s)	2540, 2579
BsnI	GGCC	8 cut(s)	324, 493, 1272, 1989, 2051, 2169, 2280, 2315
BsoBI	CYCGRG	2 cut(s)	188, 2265
Bsp1286I	GDGCHC	8 cut(s)	189, 481, 1352, 1584, 2007, 2272, 2592, 2614
Bsp1720I	GCTNAGC	1 cut(s)	1346
BspACI	CCGC	5 cut(s)	194, 346, 1906, 2146, 2161
BspANI	GGCC	8 cut(s)	324, 493, 1272, 1989, 2051, 2169, 2280, 2315
BspCNI	CTCAG	7 cut(s)	523, 692, 1126, 1200, 1338, 1890, 2162
BspDI	ATCGAT	1 cut(s)	1043
BspHI	TCATGA	2 cut(s)	250, 388
BspLI	GGNNCC	9 cut(s)	71, 186, 323, 648, 1458, 1798, 1799, 2006, 2320
BspMAI	CTGCAG	2 cut(s)	1270, 2482
BspMI	ACCTGC	1 cut(s)	1280
BspPI	GGATC	5 cut(s)	1103, 1979, 2034, 2087, 2438
BspT107I	GGYRCC	2 cut(s)	184, 2318
BspTI	CTTAAG	1 cut(s)	2249
BsrBI	CCGCTC	1 cut(s)	2148
BsrFI	RCCGGY	1 cut(s)	2315
BsrI	ACTGG	5 cut(s)	218, 494, 1308, 2079, 2599
BssAI	RCCGGY	1 cut(s)	2315
BssECI	CCNNGG	4 cut(s)	325, 873, 2185, 2275
BssNAI	GTATAC	1 cut(s)	2458
BssNI	GRCGYC	1 cut(s)	2133
BssT1I	CCWWGG	3 cut(s)	325, 873, 2185
Bst1107I	GTATAC	1 cut(s)	2458
Bst2UI	CCWGG	5 cut(s)	311, 1059, 1391, 2171, 2276
Bst6I	CTCTTC	1 cut(s)	918
BstACI	GRCGYC	1 cut(s)	2133
BstAFI	CTTAAG	1 cut(s)	2249
BstAPI	GCANNNNNTGC	1 cut(s)	1180
BstC8I	GCNNGC	3 cut(s)	1023, 1185, 1270
BstDEI	CTNAG	8 cut(s)	510, 679, 689, 1113, 1208, 1346, 1877, 2149
BstEII	GGTNACC	1 cut(s)	2431
BstF5I	GGATG	8 cut(s)	607, 1208, 1385, 1389, 1694, 1934, 1973, 2096
BstH2I	RGCGCY	1 cut(s)	2177
BstHHI	GCGC	1 cut(s)	2176
BstMAI	GTCTC	2 cut(s)	1250, 2613
BstMCI	CGRYCG	1 cut(s)	1000
BstMWI	GCNNNNNNNGC	7 cut(s)	193, 1018, 1180, 1265, 1295, 1529, 2546
BstNI	CCWGG	5 cut(s)	311, 1059, 1391, 2171, 2276
BstNSI	RCATGY	4 cut(s)	1025, 1483, 1727, 1934
BstPI	GGTNACC	1 cut(s)	2431
BstSCI	CCNGG	7 cut(s)	309, 999, 1057, 1389, 2169, 2274, 2354
BstSFI	CTRYAG	3 cut(s)	165, 1266, 2478
BstSLI	GKGCMC	3 cut(s)	189, 481, 2614
BstV2I	GAAGAC	4 cut(s)	873, 1437, 1770, 2136
BstX2I	RGATCY	7 cut(s)	973, 1971, 2039, 2092, 2384, 2419, 2443
BstXI	CCANNNNNNTGG	1 cut(s)	66
BstYI	RGATCY	7 cut(s)	973, 1971, 2039, 2092, 2384, 2419, 2443
BstZ17I	GTATAC	1 cut(s)	2458
Bsu15I	ATCGAT	1 cut(s)	1043
Bsu36I	CCTNAGG	1 cut(s)	1877
BsuRI	GGCC	8 cut(s)	324, 493, 1272, 1989, 2051, 2169, 2280, 2315
BsuTUI	ATCGAT	1 cut(s)	1043
BtgZI	GCGATG	1 cut(s)	1916
BtsCI	GGATG	8 cut(s)	607, 1208, 1385, 1389, 1694, 1934, 1973, 2096
BtsI	GCAGTG	3 cut(s)	903, 2487, 2612
BtsIMutI	CAGTG	8 cut(s)	388, 903, 1070, 1990, 2072, 2487, 2592, 2612
BveI	ACCTGC	1 cut(s)	1280
Cac8I	GCNNGC	3 cut(s)	1023, 1185, 1270
CciI	TCATGA	2 cut(s)	250, 388
CfoI	GCGC	1 cut(s)	2176
Cfr10I	RCCGGY	1 cut(s)	2315
Cfr13I	GGNCC	7 cut(s)	6, 322, 491, 1055, 1456, 1797, 2278
ClaI	ATCGAT	1 cut(s)	1043
CseI	GACGC	2 cut(s)	1232, 2141
Csp6I	GTAC	4 cut(s)	537, 1075, 1387, 1707
CspCI	CAANNNNNGTGG	2 cut(s)	777, 812
CviQI	GTAC	4 cut(s)	537, 1075, 1387, 1707
DdeI	CTNAG	8 cut(s)	510, 679, 689, 1113, 1208, 1346, 1877, 2149
DraI	TTTAAA	2 cut(s)	592, 1558
Eam1104I	CTCTTC	1 cut(s)	918
EarI	CTCTTC	1 cut(s)	918
Ecl136II	GAGCTC	2 cut(s)	1350, 1582
Eco130I	CCWWGG	3 cut(s)	325, 873, 2185
Eco147I	AGGCCT	1 cut(s)	2051
Eco24I	GRGCYC	4 cut(s)	1352, 1584, 2007, 2272
Eco47I	GGWCC	4 cut(s)	6, 1055, 1456, 1797
Eco53kI	GAGCTC	2 cut(s)	1350, 1582
Eco57I	CTGAAG	3 cut(s)	1764, 1914, 2037
Eco81I	CCTNAGG	1 cut(s)	1877
Eco88I	CYCGRG	2 cut(s)	188, 2265
Eco91I	GGTNACC	1 cut(s)	2431
EcoICRI	GAGCTC	2 cut(s)	1350, 1582
EcoO109I	RGGNCCY	4 cut(s)	6, 322, 1797, 2278
EcoO65I	GGTNACC	1 cut(s)	2431
EcoRII	CCWGG	5 cut(s)	309, 1057, 1389, 2169, 2274
EcoT14I	CCWWGG	3 cut(s)	325, 873, 2185
EcoT22I	ATGCAT	2 cut(s)	1936, 2368
EcoT38I	GRGCYC	4 cut(s)	1352, 1584, 2007, 2272
ErhI	CCWWGG	3 cut(s)	325, 873, 2185
Esp3I	CGTCTC	1 cut(s)	1250
FalI	AAGNNNNNCTT	6 cut(s)	1232, 1264, 1512, 1544, 1632, 1664
FaqI	GGGAC	3 cut(s)	767, 1695, 1783
FauNDI	CATATG	2 cut(s)	1336, 2068
FbaI	TGATCA	1 cut(s)	1356
FblI	GTMKAC	2 cut(s)	2457, 2643
FokI	GGATG	8 cut(s)	614, 1215, 1392, 1396, 1681, 1921, 1980, 2083
FriOI	GRGCYC	4 cut(s)	1352, 1584, 2007, 2272
FspBI	CTAG	6 cut(s)	534, 885, 1299, 2085, 2126, 2286
GlaI	GCGC	1 cut(s)	2175
GsuI	CTGGAG	2 cut(s)	2444, 2687
HaeII	RGCGCY	1 cut(s)	2177
HaeIII	GGCC	8 cut(s)	324, 493, 1272, 1989, 2051, 2169, 2280, 2315
HapII	CCGG	3 cut(s)	1000, 2316, 2356
HgaI	GACGC	2 cut(s)	1232, 2141
HhaI	GCGC	1 cut(s)	2176
Hin1I	GRCGYC	1 cut(s)	2133
Hin6I	GCGC	1 cut(s)	2174
HinP1I	GCGC	1 cut(s)	2174
HincII	GTYRAC	3 cut(s)	1928, 2203, 2644
HindII	GTYRAC	3 cut(s)	1928, 2203, 2644
HindIII	AAGCTT	2 cut(s)	98, 1257
HinfI	GANTC	7 cut(s)	23, 35, 170, 683, 1826, 2021, 2081
HpaII	CCGG	3 cut(s)	1000, 2316, 2356
HphI	GGTGA	3 cut(s)	539, 788, 2425
HpyAV	CCTTC	5 cut(s)	19, 82, 157, 733, 1994
HpyCH4IV	ACGT	1 cut(s)	1635
HpyF10VI	GCNNNNNNNGC	7 cut(s)	193, 1018, 1180, 1265, 1295, 1529, 2546
HpyF3I	CTNAG	8 cut(s)	510, 679, 689, 1113, 1208, 1346, 1877, 2149
HpySE526I	ACGT	1 cut(s)	1635
Hsp92I	GRCGYC	1 cut(s)	2133
HspAI	GCGC	1 cut(s)	2174
KflI	GGGWCCC	1 cut(s)	1797
Ksp22I	TGATCA	1 cut(s)	1356
LmnI	GCTCC	9 cut(s)	75, 280, 652, 1009, 1579, 1587, 1875, 2010, 2668
MaeI	CTAG	6 cut(s)	534, 885, 1299, 2085, 2126, 2286
MaeII	ACGT	1 cut(s)	1635
MaeIII	GTNAC	4 cut(s)	300, 854, 1631, 2431
MbiI	CCGCTC	1 cut(s)	2148
MfeI	CAATTG	2 cut(s)	2514, 2535
MflI	RGATCY	7 cut(s)	973, 1971, 2039, 2092, 2384, 2419, 2443
MhlI	GDGCHC	8 cut(s)	189, 481, 1352, 1584, 2007, 2272, 2592, 2614
MlyI	GAGTC	3 cut(s)	32, 44, 2075
MmeI	TCCRAC	3 cut(s)	780, 1033, 1656
Mph1103I	ATGCAT	2 cut(s)	1936, 2368
MroXI	GAANNNNTTC	1 cut(s)	975
MseI	TTAA	8 cut(s)	591, 666, 1085, 1262, 1539, 1557, 2241, 2250
MslI	CAYNNNNRTG	1 cut(s)	2679
MspA1I	CMGCKG	1 cut(s)	2228
MspCI	CTTAAG	1 cut(s)	2249
MspI	CCGG	3 cut(s)	1000, 2316, 2356
MspR9I	CCNGG	7 cut(s)	311, 1001, 1059, 1391, 2171, 2276, 2356
MssI	GTTTAAAC	1 cut(s)	1558
MunI	CAATTG	2 cut(s)	2514, 2535
Mva1269I	GAATGC	2 cut(s)	2540, 2579
MvaI	CCWGG	5 cut(s)	311, 1059, 1391, 2171, 2276
MwoI	GCNNNNNNNGC	7 cut(s)	193, 1018, 1180, 1265, 1295, 1529, 2546
NciI	CCSGG	2 cut(s)	1001, 2356
NdeI	CATATG	2 cut(s)	1336, 2068
NlaIV	GGNNCC	9 cut(s)	71, 186, 323, 648, 1458, 1798, 1799, 2006, 2320
NmuCI	GTSAC	3 cut(s)	854, 1631, 2431
NsiI	ATGCAT	2 cut(s)	1936, 2368
NspI	RCATGY	4 cut(s)	1025, 1483, 1727, 1934
OliI	CACNNNNGTG	1 cut(s)	2679
PaeI	GCATGC	1 cut(s)	1025
PagI	TCATGA	2 cut(s)	250, 388
PceI	AGGCCT	1 cut(s)	2051
PciI	ACATGT	1 cut(s)	1479
PctI	GAATGC	2 cut(s)	2540, 2579
PdmI	GAANNNNTTC	1 cut(s)	975
PfeI	GAWTC	4 cut(s)	170, 683, 1826, 2021
PleI	GAGTC	3 cut(s)	31, 43, 2075
PmeI	GTTTAAAC	1 cut(s)	1558
PpsI	GAGTC	3 cut(s)	31, 43, 2075
PpuMI	RGGWCCY	2 cut(s)	6, 1797
PscI	ACATGT	1 cut(s)	1479
PshBI	ATTAAT	2 cut(s)	1539, 2241
PsiI	TTATAA	3 cut(s)	179, 1617, 1668
Psp124BI	GAGCTC	2 cut(s)	1352, 1584
Psp5II	RGGWCCY	2 cut(s)	6, 1797
Psp6I	CCWGG	5 cut(s)	309, 1057, 1389, 2169, 2274
PspEI	GGTNACC	1 cut(s)	2431
PspGI	CCWGG	5 cut(s)	309, 1057, 1389, 2169, 2274
PspN4I	GGNNCC	9 cut(s)	71, 186, 323, 648, 1458, 1798, 1799, 2006, 2320
PspPI	GGNCC	7 cut(s)	6, 322, 491, 1055, 1456, 1797, 2278
PspPPI	RGGWCCY	2 cut(s)	6, 1797
PstI	CTGCAG	2 cut(s)	1270, 2482
PsuI	RGATCY	7 cut(s)	973, 1971, 2039, 2092, 2384, 2419, 2443
PvuII	CAGCTG	1 cut(s)	2228
RsaI	GTAC	4 cut(s)	538, 1076, 1388, 1708
RsaNI	GTAC	4 cut(s)	537, 1075, 1387, 1707
RseI	CAYNNNNRTG	1 cut(s)	2679
SacI	GAGCTC	2 cut(s)	1352, 1584
SalI	GTCGAC	1 cut(s)	2642
SaqAI	TTAA	8 cut(s)	591, 666, 1085, 1262, 1539, 1557, 2241, 2250
Sau96I	GGNCC	7 cut(s)	6, 322, 491, 1055, 1456, 1797, 2278
SchI	GAGTC	3 cut(s)	32, 44, 2075
ScrFI	CCNGG	7 cut(s)	311, 1001, 1059, 1391, 2171, 2276, 2356
SduI	GDGCHC	8 cut(s)	189, 481, 1352, 1584, 2007, 2272, 2592, 2614
SfcI	CTRYAG	3 cut(s)	165, 1266, 2478
SinI	GGWCC	4 cut(s)	6, 1055, 1456, 1797
SmiMI	CAYNNNNRTG	1 cut(s)	2679
SmlI	CTYRAG	7 cut(s)	260, 1216, 1436, 1518, 1607, 2249, 2569
SmoI	CTYRAG	7 cut(s)	260, 1216, 1436, 1518, 1607, 2249, 2569
SphI	GCATGC	1 cut(s)	1025
SseBI	AGGCCT	1 cut(s)	2051
SsiI	CCGC	5 cut(s)	194, 346, 1906, 2146, 2161
SspI	AATATT	1 cut(s)	807
SspMI	CTAG	6 cut(s)	534, 885, 1299, 2085, 2126, 2286
SstI	GAGCTC	2 cut(s)	1352, 1584
StuI	AGGCCT	1 cut(s)	2051
StyD4I	CCNGG	7 cut(s)	309, 999, 1057, 1389, 2169, 2274, 2354
StyI	CCWWGG	3 cut(s)	325, 873, 2185
TaiI	ACGT	1 cut(s)	1638
TaqI	TCGA	5 cut(s)	78, 597, 1043, 2626, 2643
TatI	WGTACW	1 cut(s)	1074
TauI	GCSGC	2 cut(s)	196, 2148
TfiI	GAWTC	4 cut(s)	170, 683, 1826, 2021
Tru1I	TTAA	8 cut(s)	591, 666, 1085, 1262, 1539, 1557, 2241, 2250
Tru9I	TTAA	8 cut(s)	591, 666, 1085, 1262, 1539, 1557, 2241, 2250
TscAI	CASTG	8 cut(s)	388, 903, 1077, 1997, 2079, 2487, 2599, 2619
TseFI	GTSAC	3 cut(s)	854, 1631, 2431
Tsp45I	GTSAC	3 cut(s)	854, 1631, 2431
TspGWI	ACGGA	5 cut(s)	140, 347, 1574, 1706, 1997
TspRI	CASTG	8 cut(s)	388, 903, 1077, 1997, 2079, 2487, 2599, 2619
Vha464I	CTTAAG	1 cut(s)	2249
VneI	GTGCAC	2 cut(s)	477, 2610
VpaK11BI	GGWCC	4 cut(s)	6, 1055, 1456, 1797
VspI	ATTAAT	2 cut(s)	1539, 2241
XapI	RAATTY	2 cut(s)	246, 824
XbaI	TCTAGA	1 cut(s)	884
XceI	RCATGY	4 cut(s)	1025, 1483, 1727, 1934
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2591
XmiI	GTMKAC	2 cut(s)	2457, 2643
XmnI	GAANNNNTTC	1 cut(s)	975
XspI	CTAG	6 cut(s)	534, 885, 1299, 2085, 2126, 2286
Zsp2I	ATGCAT	2 cut(s)	1936, 2368

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.