Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0005018

Physical Location & Seq

Genomic Coordinates Reverse (-)

52010779 .. 52014272

Gene Structure 3494 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG320100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2697 bp

ATGAGGACCTTCTTTCCCTCCGAGTCTTGTAAAGAGTCGCAGCTCAATGCTCTCAATCCACAATCTTGGCTTCAAGTCGAAAGAGGGAAGGTTTCCAAGCTTTCATCAAACTCAAACTCAAACTCCTCCTCCTCCTCCTCCTTCCGTTCATATTCTTCTATAGAATCTCTTATAAAGGTGCCCGAGCCGCCTATACTCCCATTCTATAAGCCAGTTGATTATGTGGAGGTTTTAGCTCAAATTCATGAAGAACTTGAGTTGTGTCCTCCACAGGAGCAGTCAAATCTTTATTTGTTACAATTCCAGGTCTTTAGGGGCCTTGGAGAAGTCAAGCTGATGCGGAGAAGCCTCCGTGCAGCTTGGCAGAAAGCCAACAGTGTTCATGAGAAGCTCGTATTTGCAGCATGGTTGAAGTATGAGAAGCAAGGGGAAGATCATATTTCTGACTTGCTTTCCTCTTGTGGAAAATGTGCACAGGAGTTTGGGCCAGTAGATGTTTTAGCTCAGTTTCCTGTTGATGGTGAGGCTAGTACCCATCAGACTATCTCAATGGGTGGGAACAAGATGTCAAGAAATGTCAGTTTTAAAATCGAGGATGAGAAAATAGTCTGTGATAGGCAGAAAATATCCAGCCTTTCGGCTCCATTTGATGCCATGCTTAATGGGTGCTTCTCAGAATCACTTAGCGAGGACATAGATTTGTCAAAAAACAACATCTCTGCATCCGGTATGAAGGAAATCAATGAGTTCAGTAAAACAGGCAGTTTGGGTGAAGTCCCTCCACATCTTTTGTTGGAAATATTAGCTTTTGCTAATAAATTTTGTTGCGAAAAGCTCAAAGATGCTTGTGACAGGAAACTTGCTTCCTTGGTGTCTTCTAGAGATGATGCAGTGGAACTCATGGAGTATGCACTTGAAGAGAACTGCCGTGTCCTTGCTGCATCATGTTTACAAGTTTTCTTGGAAGATCTTCCTAATTGTTTGAATGATGACCGGGTGGTGGAGCTGTTCAAGCATGCTGATAGAGAGCAAAGATCGATCATGGTTGGACCAGGCTCATTTTCACTGTACTGTTTATTAAGTGAAGTTGCTATGAACATTGATCCTCAGTCACATAAAACAGCTTGTTTTCTGGAACGGTTGGTAGAGTTTTCTGAAAATGATAGGCAAAGACTGCTGGCATCTCATCAGTTGGGATGTCTGAGGCTCTTGAGAAAAGAGTATGATGAAGCGAAGCGTCTCTTTGAGGAAGCTTTAACTGCAGGCCATATTTATTCAGTTGCAGGTTTAGCTCGACTAGATTACATCAAAGGCCATAAAGTATGGTCATATGAAAAGCTGAGCTCTGTGATCAACTCTGTTATTCCTCTTGGATGGATGTACCAGGAGAGGTCATTATACTGTGAAGATGATAAGAAATGGGAAGACCTTGAGAAAGCATCTGAATTGGACCCTACTCTTACTTATCCATACATGTATCGGGCAGCTACACTAATGAGAAAAAACAACTCTCAAGCTGCACTCGCAGAAATTAATCGGGTTCTTGGGTTTAAACTTGCCTTGGATTGCTTGGAGCTCCGTTTTTGTTTCTACCTCACTCTTGAGGATTATAAATCAGCCATTTGTGACGTTCAAGCCATACTTACTCTCTGCCCAGATTATAGGATGTTGGAGGGACGGGTTGCAGCATCCCAACTTCGTACACTTGTCCGTGAGCATGTTGAAAATTGGACAACGGCAGATTGTTGGTTGCAACTGTATGATAGGTGGTCTTCAGTTGATGATATTGGGTCCCTCTCTGTTATTTACCAGATGCTTGAATCTGATGAGGCAAAAGGTGTTCTCTATTTCAGACAGTCTTTGCTCCTCCTCAGGTTGAACTGTCCTGAAGCTGCGATGCGGAGTTTACAATTAGCTCGTCAACATGCATCCAGCGAACATGAAAAGTTGGTGTATGAGGGATGGATCTTATACGACACAGGCCACTGTGAGGACGGGCTCCGTAAAGCTGAAGAATCTATCAAAATTGAAAGATCCTTTGAGGCCTTTTTCTTGAAAGCATATGCACTGGCAGACTCTAGCCAAGATCCATCCTGTTCCTCAACTGTTGTTTCTCTCCTAGAAGACGCCTTGAAGTGCCGCTCAGACAGGTTGCGGAAAGGCCAGGCGCTAAATAACCTTGGAAGTGTTTATGTTGACTGTGGGAAGTTAGAGTTGGCAGCTGATTGCTACATTAATGCTCTTAAGATCAGGCATACCCGAGCCCACCAGGGCCTTGCTAGGGTTCATTTTCTAAAAAATGACAAGGCCGGTGCTTATGAAGAAATGACCAAACTGATTGAGAAAGCCCGGAATAATGCATCTGCCTATGAGAAAAGATCTGAATACTGTGATCGTGAACTCACAAAGACAGATCTGGAGATGGTCACCCGATTAGATCCACTTCGGGTATACCCTTACAGATATAGAGCTGCAGTGTTGATGGATAGCCACAAAGAAAAAGAGGCAATTGCCGAACTATCAAAGGCAATTGCATTCAAAGCTGATCTCCACCTTTTGCACTTGAGGGCTGCATTCCATGAGCACACTGGGAATGTCATGGGTGCACTGCGAGACTGTCGAGCTGCTCTTTCTGTCGACCCAAACCATCAAGAGATGCTGGAGCTTCACAGCCGTGTAAACAGCCATGAGCCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0006521 GO:0008150 GO:0009889 GO:0010364 GO:0010565 GO:0010817 GO:0019222 GO:0031323 GO:0031326 GO:0031335 GO:0032350 GO:0033238 GO:0042762 GO:0046885 GO:0050789 GO:0050794 GO:0051171 GO:0062012 GO:0065007 GO:0065008 GO:0080090 GO:1900908 GO:1900911

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB TPR_7 TPR_8

Protein Analysis

898

Amino Acids

102.03

Weight (kDa)

5.73

Isoelectric Point (pI)

48.34

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005018)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02680
fragaria_vesca	FvH4_2g23020 FvH4_2g23020 FvH4_2g23020 FvH4_2g23020 FvH4_2g23020 FvH4_2g23020 FvH4_2g23020
malus_domestica	MD03G1258600.v1.1 MD11G1279200.v1.1
prunus_persica	Prupe.8G235100_v2.0.a1 Prupe.8G235100_v2.0.a1 Prupe.8G235100_v2.0.a1 Prupe.8G235100_v2.0.a1 Prupe.8G235100_v2.0.a1
pyrus_communis	pycom03g20480 pycom03g20560
rosa_chinensis	RchiOBHm_Chr6g0290061
rosa_laevigata	RLG00000012249
rosa_multiflora	Rmu_sc0002902.1_g000038
rosa_roxburghii	Rroxscaffold_7G00177380
rosa_rugosa	Rorug06G0209200 Rorug06G0209300 Rorug06G0209400 Rorug06G0209500
rosa_samantha	Rh6AG320100 Rh6BG327300 Rh6CG333000 Rh6DG318900
rosa_wichuraiana	Rw6G027620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	173, 1611
Acc36I	ACCTGC	1 cut(s)	1274
AccB1I	GGYRCC	1 cut(s)	178
AccBSI	CCGCTC	1 cut(s)	2142
AccI	GTMKAC	2 cut(s)	2451, 2637
AciI	CCGC	5 cut(s)	188, 340, 1900, 2140, 2155
AclWI	GGATC	5 cut(s)	1097, 1973, 2028, 2081, 2432
AcsI	RAATTY	2 cut(s)	240, 818
AcuI	CTGAAG	3 cut(s)	1758, 1908, 2031
AcyI	GRCGYC	1 cut(s)	2127
AfaI	GTAC	4 cut(s)	532, 1070, 1382, 1702
AfiI	CCNNNNNNNGG	4 cut(s)	518, 1000, 1990, 2281
AflII	CTTAAG	1 cut(s)	2243
AflIII	ACRYGT	1 cut(s)	1473
AjnI	CCWGG	5 cut(s)	303, 1051, 1383, 2163, 2268
AjuI	GAANNNNNNNTTGG	2 cut(s)	2198, 2230
AleI	CACNNNNGTG	1 cut(s)	2673
Alw21I	GWGCWC	5 cut(s)	475, 1346, 1578, 2586, 2608
Alw26I	GTCTC	2 cut(s)	1244, 2607
Alw44I	GTGCAC	2 cut(s)	471, 2604
AlwI	GGATC	5 cut(s)	1097, 1973, 2028, 2081, 2432
Ama87I	CYCGRG	2 cut(s)	182, 2259
AoxI	GGCC	9 cut(s)	316, 485, 1264, 1312, 1981, 2043, 2161, 2272, 2307
ApaLI	GTGCAC	2 cut(s)	471, 2604
ApoI	RAATTY	2 cut(s)	240, 818
AseI	ATTAAT	2 cut(s)	1533, 2235
Asp700I	GAANNNNTTC	1 cut(s)	969
AspLEI	GCGC	1 cut(s)	2170
AspS9I	GGNCC	7 cut(s)	6, 316, 485, 1049, 1450, 1791, 2272
AsuC2I	CCSGG	2 cut(s)	995, 2350
AsuHPI	GGTGA	3 cut(s)	533, 782, 2419
AvaI	CYCGRG	2 cut(s)	182, 2259
AvaII	GGWCC	4 cut(s)	6, 1049, 1450, 1791
AxyI	CCTNAGG	1 cut(s)	1871
BaeGI	GKGCMC	3 cut(s)	183, 475, 2608
BanI	GGYRCC	1 cut(s)	178
BanII	GRGCYC	4 cut(s)	1346, 1578, 2001, 2266
BbsI	GAAGAC	4 cut(s)	867, 1431, 1764, 2130
Bbv12I	GWGCWC	5 cut(s)	475, 1346, 1578, 2586, 2608
BccI	CCATC	8 cut(s)	512, 543, 1368, 1956, 2098, 2416, 2476, 2655
BceAI	ACGGC	3 cut(s)	912, 1752, 2658
BciT130I	CCWGG	5 cut(s)	305, 1053, 1385, 2165, 2270
BclI	TGATCA	1 cut(s)	1350
BcnI	CCSGG	2 cut(s)	995, 2350
BcoDI	GTCTC	2 cut(s)	1244, 2607
BfaI	CTAG	6 cut(s)	528, 879, 1298, 2079, 2120, 2280
BfmI	CTRYAG	3 cut(s)	159, 1260, 2472
BfoI	RGCGCY	1 cut(s)	2171
BfrI	CTTAAG	1 cut(s)	2243
BfuAI	ACCTGC	1 cut(s)	1274
BglII	AGATCT	3 cut(s)	967, 2378, 2413
BlpI	GCTNAGC	1 cut(s)	1340
Bme1390I	CCNGG	7 cut(s)	305, 995, 1053, 1385, 2165, 2270, 2350
Bme18I	GGWCC	4 cut(s)	6, 1049, 1450, 1791
BmeT110I	CYCGRG	2 cut(s)	182, 2259
BmgT120I	GGNCC	7 cut(s)	6, 316, 485, 1049, 1450, 1791, 2272
BmiI	GGNNCC	7 cut(s)	180, 317, 642, 1452, 1792, 1793, 2000
BmrFI	CCNGG	7 cut(s)	305, 995, 1053, 1385, 2165, 2270, 2350
BmrI	ACTGGG	1 cut(s)	2598
BmuI	ACTGGG	1 cut(s)	2598
BpiI	GAAGAC	4 cut(s)	867, 1431, 1764, 2130
BpmI	CTGGAG	2 cut(s)	2438, 2681
Bpu1102I	GCTNAGC	1 cut(s)	1340
BpuEI	CTTGAG	6 cut(s)	275, 1231, 1451, 1497, 1622, 2584
BpuMI	CCSGG	2 cut(s)	995, 2350
Bsa29I	ATCGAT	1 cut(s)	1037
BsaHI	GRCGYC	1 cut(s)	2127
BsaJI	CCNNGG	5 cut(s)	319, 867, 1560, 2179, 2269
BsaWI	WCCGGW	1 cut(s)	725
BsaXI	ACNNNNNCTCC	4 cut(s)	107, 113, 137, 143
Bsc4I	CCNNNNNNNGG	4 cut(s)	518, 1000, 1990, 2281
Bse118I	RCCGGY	1 cut(s)	2309
Bse1I	ACTGG	4 cut(s)	212, 488, 2073, 2593
Bse21I	CCTNAGG	1 cut(s)	1871
BseBI	CCWGG	5 cut(s)	305, 1053, 1385, 2165, 2270
BseCI	ATCGAT	1 cut(s)	1037
BseDI	CCNNGG	5 cut(s)	319, 867, 1560, 2179, 2269
BseLI	CCNNNNNNNGG	4 cut(s)	518, 1000, 1990, 2281
BseMII	CTCAG	7 cut(s)	518, 687, 1121, 1193, 1331, 1885, 2157
BseNI	ACTGG	4 cut(s)	212, 488, 2073, 2593
BseRI	GAGGAG	7 cut(s)	115, 118, 121, 124, 127, 1856, 1859
BseSI	GKGCMC	3 cut(s)	183, 475, 2608
BsgI	GTGCAG	2 cut(s)	375, 1503
BshFI	GGCC	9 cut(s)	318, 487, 1266, 1314, 1983, 2045, 2163, 2274, 2309
BshNI	GGYRCC	1 cut(s)	178
BshVI	ATCGAT	1 cut(s)	1037
BsiHKAI	GWGCWC	5 cut(s)	475, 1346, 1578, 2586, 2608
BsiHKCI	CYCGRG	2 cut(s)	182, 2259
BsiSI	CCGG	4 cut(s)	726, 994, 2310, 2350
BslFI	GGGAC	3 cut(s)	761, 1689, 1777
BslI	CCNNNNNNNGG	4 cut(s)	518, 1000, 1990, 2281
BsmAI	GTCTC	2 cut(s)	1244, 2607
BsmBI	CGTCTC	1 cut(s)	1244
BsmFI	GGGAC	3 cut(s)	761, 1689, 1777
BsmI	GAATGC	2 cut(s)	2534, 2573
BsnI	GGCC	9 cut(s)	318, 487, 1266, 1314, 1983, 2045, 2163, 2274, 2309
BsoBI	CYCGRG	2 cut(s)	182, 2259
Bsp1286I	GDGCHC	8 cut(s)	183, 475, 1346, 1578, 2001, 2266, 2586, 2608
Bsp1720I	GCTNAGC	1 cut(s)	1340
BspACI	CCGC	5 cut(s)	188, 340, 1900, 2140, 2155
BspANI	GGCC	9 cut(s)	318, 487, 1266, 1314, 1983, 2045, 2163, 2274, 2309
BspCNI	CTCAG	7 cut(s)	517, 686, 1120, 1194, 1332, 1884, 2156
BspDI	ATCGAT	1 cut(s)	1037
BspHI	TCATGA	2 cut(s)	244, 382
BspLI	GGNNCC	7 cut(s)	180, 317, 642, 1452, 1792, 1793, 2000
BspMAI	CTGCAG	2 cut(s)	1264, 2476
BspMI	ACCTGC	1 cut(s)	1274
BspPI	GGATC	5 cut(s)	1097, 1973, 2028, 2081, 2432
BspT107I	GGYRCC	1 cut(s)	178
BspTI	CTTAAG	1 cut(s)	2243
BsrBI	CCGCTC	1 cut(s)	2142
BsrFI	RCCGGY	1 cut(s)	2309
BsrI	ACTGG	4 cut(s)	212, 488, 2073, 2593
BssAI	RCCGGY	1 cut(s)	2309
BssECI	CCNNGG	5 cut(s)	319, 867, 1560, 2179, 2269
BssNAI	GTATAC	1 cut(s)	2452
BssNI	GRCGYC	1 cut(s)	2127
BssT1I	CCWWGG	4 cut(s)	319, 867, 1560, 2179
Bst1107I	GTATAC	1 cut(s)	2452
Bst2UI	CCWGG	5 cut(s)	305, 1053, 1385, 2165, 2270
Bst6I	CTCTTC	1 cut(s)	912
BstACI	GRCGYC	1 cut(s)	2127
BstAFI	CTTAAG	1 cut(s)	2243
BstAPI	GCANNNNNTGC	1 cut(s)	1174
BstC8I	GCNNGC	3 cut(s)	1017, 1179, 1264
BstDEI	CTNAG	8 cut(s)	504, 673, 683, 1107, 1202, 1340, 1871, 2143
BstEII	GGTNACC	1 cut(s)	2425
BstH2I	RGCGCY	1 cut(s)	2171
BstHHI	GCGC	1 cut(s)	2170
BstMAI	GTCTC	2 cut(s)	1244, 2607
BstMWI	GCNNNNNNNGC	7 cut(s)	187, 1012, 1174, 1259, 1289, 1523, 2540
BstNI	CCWGG	5 cut(s)	305, 1053, 1385, 2165, 2270
BstNSI	RCATGY	4 cut(s)	1019, 1477, 1721, 1928
BstPI	GGTNACC	1 cut(s)	2425
BstSCI	CCNGG	7 cut(s)	303, 993, 1051, 1383, 2163, 2268, 2348
BstSFI	CTRYAG	3 cut(s)	159, 1260, 2472
BstSLI	GKGCMC	3 cut(s)	183, 475, 2608
BstV2I	GAAGAC	4 cut(s)	867, 1431, 1764, 2130
BstX2I	RGATCY	7 cut(s)	967, 1965, 2033, 2086, 2378, 2413, 2437
BstXI	CCANNNNNNTGG	1 cut(s)	66
BstYI	RGATCY	7 cut(s)	967, 1965, 2033, 2086, 2378, 2413, 2437
BstZ17I	GTATAC	1 cut(s)	2452
Bsu15I	ATCGAT	1 cut(s)	1037
Bsu36I	CCTNAGG	1 cut(s)	1871
BsuRI	GGCC	9 cut(s)	318, 487, 1266, 1314, 1983, 2045, 2163, 2274, 2309
BsuTUI	ATCGAT	1 cut(s)	1037
BtgZI	GCGATG	1 cut(s)	1910
BtsI	GCAGTG	3 cut(s)	897, 2481, 2606
BtsIMutI	CAGTG	8 cut(s)	382, 897, 1064, 1984, 2066, 2481, 2586, 2606
BveI	ACCTGC	1 cut(s)	1274
Cac8I	GCNNGC	3 cut(s)	1017, 1179, 1264
CciI	TCATGA	2 cut(s)	244, 382
CfoI	GCGC	1 cut(s)	2170
Cfr10I	RCCGGY	1 cut(s)	2309
Cfr13I	GGNCC	7 cut(s)	6, 316, 485, 1049, 1450, 1791, 2272
ClaI	ATCGAT	1 cut(s)	1037
CseI	GACGC	2 cut(s)	1226, 2135
Csp6I	GTAC	4 cut(s)	531, 1069, 1381, 1701
CspCI	CAANNNNNGTGG	2 cut(s)	771, 806
CviQI	GTAC	4 cut(s)	531, 1069, 1381, 1701
DdeI	CTNAG	8 cut(s)	504, 673, 683, 1107, 1202, 1340, 1871, 2143
DraI	TTTAAA	2 cut(s)	586, 1552
Eam1104I	CTCTTC	1 cut(s)	912
EarI	CTCTTC	1 cut(s)	912
Ecl136II	GAGCTC	2 cut(s)	1344, 1576
Eco130I	CCWWGG	4 cut(s)	319, 867, 1560, 2179
Eco147I	AGGCCT	1 cut(s)	2045
Eco24I	GRGCYC	4 cut(s)	1346, 1578, 2001, 2266
Eco47I	GGWCC	4 cut(s)	6, 1049, 1450, 1791
Eco53kI	GAGCTC	2 cut(s)	1344, 1576
Eco57I	CTGAAG	3 cut(s)	1758, 1908, 2031
Eco81I	CCTNAGG	1 cut(s)	1871
Eco88I	CYCGRG	2 cut(s)	182, 2259
Eco91I	GGTNACC	1 cut(s)	2425
EcoICRI	GAGCTC	2 cut(s)	1344, 1576
EcoO109I	RGGNCCY	4 cut(s)	6, 316, 1791, 2272
EcoO65I	GGTNACC	1 cut(s)	2425
EcoRII	CCWGG	5 cut(s)	303, 1051, 1383, 2163, 2268
EcoT14I	CCWWGG	4 cut(s)	319, 867, 1560, 2179
EcoT22I	ATGCAT	2 cut(s)	1930, 2362
EcoT38I	GRGCYC	4 cut(s)	1346, 1578, 2001, 2266
ErhI	CCWWGG	4 cut(s)	319, 867, 1560, 2179
Esp3I	CGTCTC	1 cut(s)	1244
FalI	AAGNNNNNCTT	4 cut(s)	1226, 1258, 1626, 1658
FaqI	GGGAC	3 cut(s)	761, 1689, 1777
FauNDI	CATATG	2 cut(s)	1330, 2062
FbaI	TGATCA	1 cut(s)	1350
FblI	GTMKAC	2 cut(s)	2451, 2637
FriOI	GRGCYC	4 cut(s)	1346, 1578, 2001, 2266
FspBI	CTAG	6 cut(s)	528, 879, 1298, 2079, 2120, 2280
GlaI	GCGC	1 cut(s)	2169
GsuI	CTGGAG	2 cut(s)	2438, 2681
HaeII	RGCGCY	1 cut(s)	2171
HaeIII	GGCC	9 cut(s)	318, 487, 1266, 1314, 1983, 2045, 2163, 2274, 2309
HapII	CCGG	4 cut(s)	726, 994, 2310, 2350
HgaI	GACGC	2 cut(s)	1226, 2135
HhaI	GCGC	1 cut(s)	2170
Hin1I	GRCGYC	1 cut(s)	2127
Hin6I	GCGC	1 cut(s)	2168
HinP1I	GCGC	1 cut(s)	2168
HincII	GTYRAC	3 cut(s)	1922, 2197, 2638
HindII	GTYRAC	3 cut(s)	1922, 2197, 2638
HindIII	AAGCTT	2 cut(s)	98, 1251
HinfI	GANTC	7 cut(s)	23, 35, 164, 677, 1820, 2015, 2075
HpaII	CCGG	4 cut(s)	726, 994, 2310, 2350
HphI	GGTGA	3 cut(s)	533, 782, 2419
HpyAV	CCTTC	4 cut(s)	19, 82, 151, 727
HpyCH4IV	ACGT	1 cut(s)	1629
HpyF10VI	GCNNNNNNNGC	7 cut(s)	187, 1012, 1174, 1259, 1289, 1523, 2540
HpyF3I	CTNAG	8 cut(s)	504, 673, 683, 1107, 1202, 1340, 1871, 2143
HpySE526I	ACGT	1 cut(s)	1629
Hsp92I	GRCGYC	1 cut(s)	2127
HspAI	GCGC	1 cut(s)	2168
KflI	GGGWCCC	1 cut(s)	1791
Ksp22I	TGATCA	1 cut(s)	1350
LmnI	GCTCC	8 cut(s)	274, 646, 1003, 1573, 1581, 1869, 2004, 2662
MaeI	CTAG	6 cut(s)	528, 879, 1298, 2079, 2120, 2280
MaeII	ACGT	1 cut(s)	1629
MaeIII	GTNAC	5 cut(s)	294, 848, 1110, 1625, 2425
MbiI	CCGCTC	1 cut(s)	2142
MfeI	CAATTG	2 cut(s)	2508, 2529
MflI	RGATCY	7 cut(s)	967, 1965, 2033, 2086, 2378, 2413, 2437
MhlI	GDGCHC	8 cut(s)	183, 475, 1346, 1578, 2001, 2266, 2586, 2608
MlyI	GAGTC	3 cut(s)	32, 44, 2069
MmeI	TCCRAC	3 cut(s)	774, 1027, 1650
Mph1103I	ATGCAT	2 cut(s)	1930, 2362
MroXI	GAANNNNTTC	1 cut(s)	969
MseI	TTAA	8 cut(s)	585, 660, 1079, 1256, 1533, 1551, 2235, 2244
MslI	CAYNNNNRTG	1 cut(s)	2673
MspA1I	CMGCKG	1 cut(s)	2222
MspCI	CTTAAG	1 cut(s)	2243
MspI	CCGG	4 cut(s)	726, 994, 2310, 2350
MspR9I	CCNGG	7 cut(s)	305, 995, 1053, 1385, 2165, 2270, 2350
MssI	GTTTAAAC	1 cut(s)	1552
MunI	CAATTG	2 cut(s)	2508, 2529
Mva1269I	GAATGC	2 cut(s)	2534, 2573
MvaI	CCWGG	5 cut(s)	305, 1053, 1385, 2165, 2270
MwoI	GCNNNNNNNGC	7 cut(s)	187, 1012, 1174, 1259, 1289, 1523, 2540
NciI	CCSGG	2 cut(s)	995, 2350
NdeI	CATATG	2 cut(s)	1330, 2062
NlaIV	GGNNCC	7 cut(s)	180, 317, 642, 1452, 1792, 1793, 2000
NmuCI	GTSAC	4 cut(s)	848, 1110, 1625, 2425
NsiI	ATGCAT	2 cut(s)	1930, 2362
NspI	RCATGY	4 cut(s)	1019, 1477, 1721, 1928
OliI	CACNNNNGTG	1 cut(s)	2673
PaeI	GCATGC	1 cut(s)	1019
PagI	TCATGA	2 cut(s)	244, 382
PceI	AGGCCT	1 cut(s)	2045
PciI	ACATGT	1 cut(s)	1473
PctI	GAATGC	2 cut(s)	2534, 2573
PdmI	GAANNNNTTC	1 cut(s)	969
PfeI	GAWTC	4 cut(s)	164, 677, 1820, 2015
PleI	GAGTC	3 cut(s)	31, 43, 2069
PmeI	GTTTAAAC	1 cut(s)	1552
PpsI	GAGTC	3 cut(s)	31, 43, 2069
PpuMI	RGGWCCY	2 cut(s)	6, 1791
PscI	ACATGT	1 cut(s)	1473
PshBI	ATTAAT	2 cut(s)	1533, 2235
PsiI	TTATAA	2 cut(s)	173, 1611
Psp124BI	GAGCTC	2 cut(s)	1346, 1578
Psp5II	RGGWCCY	2 cut(s)	6, 1791
Psp6I	CCWGG	5 cut(s)	303, 1051, 1383, 2163, 2268
PspEI	GGTNACC	1 cut(s)	2425
PspGI	CCWGG	5 cut(s)	303, 1051, 1383, 2163, 2268
PspN4I	GGNNCC	7 cut(s)	180, 317, 642, 1452, 1792, 1793, 2000
PspPI	GGNCC	7 cut(s)	6, 316, 485, 1049, 1450, 1791, 2272
PspPPI	RGGWCCY	2 cut(s)	6, 1791
PstI	CTGCAG	2 cut(s)	1264, 2476
PsuI	RGATCY	7 cut(s)	967, 1965, 2033, 2086, 2378, 2413, 2437
PvuII	CAGCTG	1 cut(s)	2222
RsaI	GTAC	4 cut(s)	532, 1070, 1382, 1702
RsaNI	GTAC	4 cut(s)	531, 1069, 1381, 1701
RseI	CAYNNNNRTG	1 cut(s)	2673
SacI	GAGCTC	2 cut(s)	1346, 1578
SalI	GTCGAC	1 cut(s)	2636
SaqAI	TTAA	8 cut(s)	585, 660, 1079, 1256, 1533, 1551, 2235, 2244
Sau96I	GGNCC	7 cut(s)	6, 316, 485, 1049, 1450, 1791, 2272
SchI	GAGTC	3 cut(s)	32, 44, 2069
ScrFI	CCNGG	7 cut(s)	305, 995, 1053, 1385, 2165, 2270, 2350
SduI	GDGCHC	8 cut(s)	183, 475, 1346, 1578, 2001, 2266, 2586, 2608
SfcI	CTRYAG	3 cut(s)	159, 1260, 2472
SinI	GGWCC	4 cut(s)	6, 1049, 1450, 1791
SmiMI	CAYNNNNRTG	1 cut(s)	2673
SmlI	CTYRAG	7 cut(s)	254, 1210, 1430, 1512, 1601, 2243, 2563
SmoI	CTYRAG	7 cut(s)	254, 1210, 1430, 1512, 1601, 2243, 2563
SphI	GCATGC	1 cut(s)	1019
SseBI	AGGCCT	1 cut(s)	2045
SsiI	CCGC	5 cut(s)	188, 340, 1900, 2140, 2155
SspI	AATATT	1 cut(s)	801
SspMI	CTAG	6 cut(s)	528, 879, 1298, 2079, 2120, 2280
SstI	GAGCTC	2 cut(s)	1346, 1578
StuI	AGGCCT	1 cut(s)	2045
StyD4I	CCNGG	7 cut(s)	303, 993, 1051, 1383, 2163, 2268, 2348
StyI	CCWWGG	4 cut(s)	319, 867, 1560, 2179
TaiI	ACGT	1 cut(s)	1632
TaqI	TCGA	6 cut(s)	78, 591, 1037, 1294, 2620, 2637
TatI	WGTACW	1 cut(s)	1068
TauI	GCSGC	2 cut(s)	190, 2142
TfiI	GAWTC	4 cut(s)	164, 677, 1820, 2015
Tru1I	TTAA	8 cut(s)	585, 660, 1079, 1256, 1533, 1551, 2235, 2244
Tru9I	TTAA	8 cut(s)	585, 660, 1079, 1256, 1533, 1551, 2235, 2244
TscAI	CASTG	8 cut(s)	382, 897, 1071, 1991, 2073, 2481, 2593, 2613
TseFI	GTSAC	4 cut(s)	848, 1110, 1625, 2425
Tsp45I	GTSAC	4 cut(s)	848, 1110, 1625, 2425
TspGWI	ACGGA	5 cut(s)	134, 341, 1568, 1700, 1991
TspRI	CASTG	8 cut(s)	382, 897, 1071, 1991, 2073, 2481, 2593, 2613
Vha464I	CTTAAG	1 cut(s)	2243
VneI	GTGCAC	2 cut(s)	471, 2604
VpaK11BI	GGWCC	4 cut(s)	6, 1049, 1450, 1791
VspI	ATTAAT	2 cut(s)	1533, 2235
XapI	RAATTY	2 cut(s)	240, 818
XbaI	TCTAGA	1 cut(s)	878
XceI	RCATGY	4 cut(s)	1019, 1477, 1721, 1928
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2585
XmiI	GTMKAC	2 cut(s)	2451, 2637
XmnI	GAANNNNTTC	1 cut(s)	969
XspI	CTAG	6 cut(s)	528, 879, 1298, 2079, 2120, 2280
Zsp2I	ATGCAT	2 cut(s)	1930, 2362

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.