Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002902.1

Orthogroup ID

OG0005018

Physical Location & Seq

Genomic Coordinates Forward (+)

216350 .. 219852

Gene Structure 3503 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002902.1_g000038.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2706 bp

atgaggaccttctttccctccgagtcttgtaaagagtcgcagctcaatgctctcaatccacaatcttggcttcaagtcgaaagagggaaggtttccaagctttcatcaaactcaaactcaaactcaaactcaaactcctcctcctcctccttccgttcatattcttctatagaatctcttataaaggtgcccgagccacctatactcccattctataagccagttgattatgtggaggttttggctcaaattcatgaagaacttgagttgtgtcctccacaggagcagtcaaatctttatttgttacaattccaggtctttaggggccttggagaagtcaagctgatgcggagaagcctccgtgcagcttggcagaaagccaacagtgttcatgagaagctcgtatttgcagcatggttgaagtatgagaagcaaggggaagatcatatttctgacttgctttcctcttgtggaaaatgtgcacaggagtttgggccagtagatgttttagctcagtttcctgttgatggtgaggctagtacccatcagactatctcaatgggtgggaacaagatgtcaagaaatgtcagttttaaaatcgaggatgagaaaatagtctgtgataggcagaaaatatccaccctttcggctccatttgatgccatgcttaatgggtgcttctcagaatcacttagcgaggacatagatttgtcaaaaaacaacatctctgcatccggtatgaaggaaatcaatgagttcagtaaaacaggcagtttgggtgaagtccctccacatcttttgttggaaatattagcttttgctaataaattttgttgcgaaaagctcaaagatgcttgtgacaggaaacttgcttccttggtgtcttctagagatgatgcagtggaactcatggagtatgcacttgaagagaactgtcgtgtccttgctgcatcatgtttacaagttttcttggaagatcttcctaattgtttgaatgatgaccgggtggtggagctgttcaagcatgctgatagagagcaaagatcgatcatggttggaccaggctcattttcactgtactgtttattaagtgaagttgctatgaacattgatcctcagtcacataaaacagcttgttttctggaacggttggtagagttttctgaaaatgataggcaaagactgctggcatctcatcagttgggatgtctgaggctcttgagaaaagagtatgatgaagcgaagcgtctctttgaggaagctttaactgcaggccatatttattcagttgcaggtttagctcgactagattacatcaaaggccataaattatggtcatatgaaaagctgagctctgtgatcaactctgttattcctcttggatggatgtaccaggagaggtcattatactgtgaagatgataagaaatgggaagaccttgagaaagcatctgaattggaccctactcttacttatccatacatgtatcgggcagctacactaatgagaaaaaacaactctcaagctgcactcgcagaaattaatcgggttcttgggtttaaacttgcattggattgcttggagctccgtttttgtttctacctcactcttgaggattataaatcagccatttgtgacgttcaagcaatacttactctctgcccagattataggatgttggagggacgggttgcagcatcccaacttcgtacacttgtccgtgagcatgttgaaaattggacaacagcagattgttggttgcaactgtatgataggtggtcttcagttgatgatattgggtccctctctgttatttaccagatgcttgaatctgatgaggcaaaaggtgttctctatttcagacagtctttgctcctcctcaggttgaactgtcctgaagctgcgatgcggagtttacaattagctcgtcaacatgcatccagcgaacatgaaaagttggtgtatgagggatggatcttatacgacacaggccactgtgaggacgggctccgtaaagctgaagaatctatcaaaattgaaagatcctttgaggcctttttcttgaaagcatatgcactggcagactctagccaagatccatcctgttcctcaactgttgtttctctcctagaagacgccttgaagtgccgctcagacaggttgcggaaaggccaggcgctaaataaccttggaagtgtttatgttgactgtgggaagttagcgttggcagctgattgctacattaatgctcttaagatcaggcatacccgagcccaccagggccttgctagggttcattttctcaaaaatgacaaggccggtgcttatgaagaaatgaccaaactgattgagaaagcccggaataatgcatctgcatatgagaaaagatctgaatactgtgatcgtgaactcacaaagacagatctggagatggtcacccgattagatccacttcgggtatacccttacagatatagagctgcagttttgatggatagccacaaagaaaaagaggcaattgccgaactatcaaaggcaattgcattcaaagctgatctccaccttttgcacttgagggctgcattccatgagcacactgggaatgtcatgggtgcactgcgagactgtcgagctgctctttctgtcgacccaaaccatcaagagatgctggagcttcacagccgtgtaaacagccatgagccatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0006521 GO:0008150 GO:0009889 GO:0010364 GO:0010565 GO:0010817 GO:0019222 GO:0031323 GO:0031326 GO:0031335 GO:0032350 GO:0033238 GO:0042762 GO:0046885 GO:0050789 GO:0050794 GO:0051171 GO:0062012 GO:0065007 GO:0065008 GO:0080090 GO:1900908 GO:1900911

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB TPR_7 TPR_8

Protein Analysis

901

Amino Acids

102.31

Weight (kDa)

5.77

Isoelectric Point (pI)

48.05

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005018)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02680
fragaria_vesca	FvH4_2g23020 FvH4_2g23020 FvH4_2g23020 FvH4_2g23020 FvH4_2g23020 FvH4_2g23020 FvH4_2g23020
malus_domestica	MD03G1258600.v1.1 MD11G1279200.v1.1
prunus_persica	Prupe.8G235100_v2.0.a1 Prupe.8G235100_v2.0.a1 Prupe.8G235100_v2.0.a1 Prupe.8G235100_v2.0.a1 Prupe.8G235100_v2.0.a1
pyrus_communis	pycom03g20480 pycom03g20560
rosa_chinensis	RchiOBHm_Chr6g0290061
rosa_laevigata	RLG00000012249
rosa_multiflora	Rmu_sc0002902.1_g000038
rosa_roxburghii	Rroxscaffold_7G00177380
rosa_rugosa	Rorug06G0209200 Rorug06G0209300 Rorug06G0209400 Rorug06G0209500
rosa_samantha	Rh6AG320100 Rh6BG327300 Rh6CG333000 Rh6DG318900
rosa_wichuraiana	Rw6G027620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	182, 1620
Acc36I	ACCTGC	1 cut(s)	1283
AccB1I	GGYRCC	1 cut(s)	187
AccBSI	CCGCTC	1 cut(s)	2151
AccI	GTMKAC	2 cut(s)	2460, 2646
AciI	CCGC	4 cut(s)	349, 1909, 2149, 2164
AclWI	GGATC	5 cut(s)	1106, 1982, 2037, 2090, 2441
AcsI	RAATTY	2 cut(s)	249, 827
AcuI	CTGAAG	3 cut(s)	1767, 1917, 2040
AcyI	GRCGYC	1 cut(s)	2136
AfaI	GTAC	4 cut(s)	541, 1079, 1391, 1711
AfiI	CCNNNNNNNGG	4 cut(s)	527, 1009, 1999, 2290
AflII	CTTAAG	1 cut(s)	2252
AflIII	ACRYGT	1 cut(s)	1482
AjnI	CCWGG	5 cut(s)	312, 1060, 1392, 2172, 2277
AjuI	GAANNNNNNNTTGG	2 cut(s)	2207, 2239
AleI	CACNNNNGTG	1 cut(s)	2682
Alw21I	GWGCWC	5 cut(s)	484, 1355, 1587, 2595, 2617
Alw26I	GTCTC	2 cut(s)	1253, 2616
Alw44I	GTGCAC	2 cut(s)	480, 2613
AlwI	GGATC	5 cut(s)	1106, 1982, 2037, 2090, 2441
Ama87I	CYCGRG	2 cut(s)	191, 2268
AoxI	GGCC	9 cut(s)	325, 494, 1273, 1321, 1990, 2052, 2170, 2281, 2316
ApaLI	GTGCAC	2 cut(s)	480, 2613
ApoI	RAATTY	2 cut(s)	249, 827
AseI	ATTAAT	2 cut(s)	1542, 2244
Asp700I	GAANNNNTTC	1 cut(s)	978
AspLEI	GCGC	1 cut(s)	2179
AspS9I	GGNCC	7 cut(s)	6, 325, 494, 1058, 1459, 1800, 2281
AsuC2I	CCSGG	2 cut(s)	1004, 2359
AsuHPI	GGTGA	3 cut(s)	542, 791, 2428
AvaI	CYCGRG	2 cut(s)	191, 2268
AvaII	GGWCC	4 cut(s)	6, 1058, 1459, 1800
AxyI	CCTNAGG	1 cut(s)	1880
BaeGI	GKGCMC	3 cut(s)	192, 484, 2617
BanI	GGYRCC	1 cut(s)	187
BanII	GRGCYC	4 cut(s)	1355, 1587, 2010, 2275
BbsI	GAAGAC	4 cut(s)	876, 1440, 1773, 2139
Bbv12I	GWGCWC	5 cut(s)	484, 1355, 1587, 2595, 2617
BccI	CCATC	8 cut(s)	521, 552, 1377, 1965, 2107, 2425, 2485, 2664
BceAI	ACGGC	1 cut(s)	2667
BciT130I	CCWGG	5 cut(s)	314, 1062, 1394, 2174, 2279
BclI	TGATCA	1 cut(s)	1359
BcnI	CCSGG	2 cut(s)	1004, 2359
BcoDI	GTCTC	2 cut(s)	1253, 2616
BfaI	CTAG	6 cut(s)	537, 888, 1307, 2088, 2129, 2289
BfmI	CTRYAG	3 cut(s)	168, 1269, 2481
BfoI	RGCGCY	1 cut(s)	2180
BfrI	CTTAAG	1 cut(s)	2252
BfuAI	ACCTGC	1 cut(s)	1283
BglII	AGATCT	3 cut(s)	976, 2387, 2422
BlpI	GCTNAGC	1 cut(s)	1349
Bme1390I	CCNGG	7 cut(s)	314, 1004, 1062, 1394, 2174, 2279, 2359
Bme18I	GGWCC	4 cut(s)	6, 1058, 1459, 1800
BmeT110I	CYCGRG	2 cut(s)	191, 2268
BmgT120I	GGNCC	7 cut(s)	6, 325, 494, 1058, 1459, 1800, 2281
BmiI	GGNNCC	7 cut(s)	189, 326, 651, 1461, 1801, 1802, 2009
BmrFI	CCNGG	7 cut(s)	314, 1004, 1062, 1394, 2174, 2279, 2359
BmrI	ACTGGG	1 cut(s)	2607
BmuI	ACTGGG	1 cut(s)	2607
BpiI	GAAGAC	4 cut(s)	876, 1440, 1773, 2139
BpmI	CTGGAG	2 cut(s)	2447, 2690
Bpu1102I	GCTNAGC	1 cut(s)	1349
BpuEI	CTTGAG	6 cut(s)	284, 1240, 1460, 1506, 1631, 2593
BpuMI	CCSGG	2 cut(s)	1004, 2359
Bsa29I	ATCGAT	1 cut(s)	1046
BsaHI	GRCGYC	1 cut(s)	2136
BsaJI	CCNNGG	4 cut(s)	328, 876, 2188, 2278
BsaWI	WCCGGW	1 cut(s)	734
BsaXI	ACNNNNNCTCC	6 cut(s)	119, 125, 149, 155, 189, 219
Bsc4I	CCNNNNNNNGG	4 cut(s)	527, 1009, 1999, 2290
Bse118I	RCCGGY	1 cut(s)	2318
Bse1I	ACTGG	4 cut(s)	221, 497, 2082, 2602
Bse21I	CCTNAGG	1 cut(s)	1880
BseBI	CCWGG	5 cut(s)	314, 1062, 1394, 2174, 2279
BseCI	ATCGAT	1 cut(s)	1046
BseDI	CCNNGG	4 cut(s)	328, 876, 2188, 2278
BseLI	CCNNNNNNNGG	4 cut(s)	527, 1009, 1999, 2290
BseMII	CTCAG	7 cut(s)	527, 696, 1130, 1202, 1340, 1894, 2166
BseNI	ACTGG	4 cut(s)	221, 497, 2082, 2602
BseRI	GAGGAG	6 cut(s)	127, 130, 133, 136, 1865, 1868
BseSI	GKGCMC	3 cut(s)	192, 484, 2617
BsgI	GTGCAG	2 cut(s)	384, 1512
BshFI	GGCC	9 cut(s)	327, 496, 1275, 1323, 1992, 2054, 2172, 2283, 2318
BshNI	GGYRCC	1 cut(s)	187
BshVI	ATCGAT	1 cut(s)	1046
BsiHKAI	GWGCWC	5 cut(s)	484, 1355, 1587, 2595, 2617
BsiHKCI	CYCGRG	2 cut(s)	191, 2268
BsiSI	CCGG	4 cut(s)	735, 1003, 2319, 2359
BslFI	GGGAC	3 cut(s)	770, 1698, 1786
BslI	CCNNNNNNNGG	4 cut(s)	527, 1009, 1999, 2290
BsmAI	GTCTC	2 cut(s)	1253, 2616
BsmBI	CGTCTC	1 cut(s)	1253
BsmFI	GGGAC	3 cut(s)	770, 1698, 1786
BsmI	GAATGC	2 cut(s)	2543, 2582
BsnI	GGCC	9 cut(s)	327, 496, 1275, 1323, 1992, 2054, 2172, 2283, 2318
BsoBI	CYCGRG	2 cut(s)	191, 2268
Bsp1286I	GDGCHC	8 cut(s)	192, 484, 1355, 1587, 2010, 2275, 2595, 2617
Bsp1720I	GCTNAGC	1 cut(s)	1349
BspACI	CCGC	4 cut(s)	349, 1909, 2149, 2164
BspANI	GGCC	9 cut(s)	327, 496, 1275, 1323, 1992, 2054, 2172, 2283, 2318
BspCNI	CTCAG	7 cut(s)	526, 695, 1129, 1203, 1341, 1893, 2165
BspDI	ATCGAT	1 cut(s)	1046
BspHI	TCATGA	2 cut(s)	253, 391
BspLI	GGNNCC	7 cut(s)	189, 326, 651, 1461, 1801, 1802, 2009
BspMAI	CTGCAG	2 cut(s)	1273, 2485
BspMI	ACCTGC	1 cut(s)	1283
BspPI	GGATC	5 cut(s)	1106, 1982, 2037, 2090, 2441
BspT107I	GGYRCC	1 cut(s)	187
BspTI	CTTAAG	1 cut(s)	2252
BsrBI	CCGCTC	1 cut(s)	2151
BsrFI	RCCGGY	1 cut(s)	2318
BsrI	ACTGG	4 cut(s)	221, 497, 2082, 2602
BssAI	RCCGGY	1 cut(s)	2318
BssECI	CCNNGG	4 cut(s)	328, 876, 2188, 2278
BssNAI	GTATAC	1 cut(s)	2461
BssNI	GRCGYC	1 cut(s)	2136
BssT1I	CCWWGG	3 cut(s)	328, 876, 2188
Bst1107I	GTATAC	1 cut(s)	2461
Bst2UI	CCWGG	5 cut(s)	314, 1062, 1394, 2174, 2279
Bst6I	CTCTTC	1 cut(s)	921
BstACI	GRCGYC	1 cut(s)	2136
BstAFI	CTTAAG	1 cut(s)	2252
BstAPI	GCANNNNNTGC	1 cut(s)	1183
BstC8I	GCNNGC	3 cut(s)	1026, 1188, 1273
BstDEI	CTNAG	8 cut(s)	513, 682, 692, 1116, 1211, 1349, 1880, 2152
BstEII	GGTNACC	1 cut(s)	2434
BstH2I	RGCGCY	1 cut(s)	2180
BstHHI	GCGC	1 cut(s)	2179
BstMAI	GTCTC	2 cut(s)	1253, 2616
BstMWI	GCNNNNNNNGC	7 cut(s)	1021, 1183, 1268, 1298, 1532, 2228, 2549
BstNI	CCWGG	5 cut(s)	314, 1062, 1394, 2174, 2279
BstNSI	RCATGY	4 cut(s)	1028, 1486, 1730, 1937
BstPI	GGTNACC	1 cut(s)	2434
BstSCI	CCNGG	7 cut(s)	312, 1002, 1060, 1392, 2172, 2277, 2357
BstSFI	CTRYAG	3 cut(s)	168, 1269, 2481
BstSLI	GKGCMC	3 cut(s)	192, 484, 2617
BstV2I	GAAGAC	4 cut(s)	876, 1440, 1773, 2139
BstX2I	RGATCY	7 cut(s)	976, 1974, 2042, 2095, 2387, 2422, 2446
BstXI	CCANNNNNNTGG	1 cut(s)	66
BstYI	RGATCY	7 cut(s)	976, 1974, 2042, 2095, 2387, 2422, 2446
BstZ17I	GTATAC	1 cut(s)	2461
Bsu15I	ATCGAT	1 cut(s)	1046
Bsu36I	CCTNAGG	1 cut(s)	1880
BsuRI	GGCC	9 cut(s)	327, 496, 1275, 1323, 1992, 2054, 2172, 2283, 2318
BsuTUI	ATCGAT	1 cut(s)	1046
BtgZI	GCGATG	1 cut(s)	1919
BtsI	GCAGTG	2 cut(s)	906, 2615
BtsIMutI	CAGTG	7 cut(s)	391, 906, 1073, 1993, 2075, 2595, 2615
BveI	ACCTGC	1 cut(s)	1283
Cac8I	GCNNGC	3 cut(s)	1026, 1188, 1273
CciI	TCATGA	2 cut(s)	253, 391
CfoI	GCGC	1 cut(s)	2179
Cfr10I	RCCGGY	1 cut(s)	2318
Cfr13I	GGNCC	7 cut(s)	6, 325, 494, 1058, 1459, 1800, 2281
ClaI	ATCGAT	1 cut(s)	1046
CseI	GACGC	2 cut(s)	1235, 2144
Csp6I	GTAC	4 cut(s)	540, 1078, 1390, 1710
CspCI	CAANNNNNGTGG	2 cut(s)	780, 815
CviQI	GTAC	4 cut(s)	540, 1078, 1390, 1710
DdeI	CTNAG	8 cut(s)	513, 682, 692, 1116, 1211, 1349, 1880, 2152
DraI	TTTAAA	2 cut(s)	595, 1561
Eam1104I	CTCTTC	1 cut(s)	921
EarI	CTCTTC	1 cut(s)	921
Ecl136II	GAGCTC	2 cut(s)	1353, 1585
Eco130I	CCWWGG	3 cut(s)	328, 876, 2188
Eco147I	AGGCCT	1 cut(s)	2054
Eco24I	GRGCYC	4 cut(s)	1355, 1587, 2010, 2275
Eco47I	GGWCC	4 cut(s)	6, 1058, 1459, 1800
Eco53kI	GAGCTC	2 cut(s)	1353, 1585
Eco57I	CTGAAG	3 cut(s)	1767, 1917, 2040
Eco81I	CCTNAGG	1 cut(s)	1880
Eco88I	CYCGRG	2 cut(s)	191, 2268
Eco91I	GGTNACC	1 cut(s)	2434
EcoICRI	GAGCTC	2 cut(s)	1353, 1585
EcoO109I	RGGNCCY	4 cut(s)	6, 325, 1800, 2281
EcoO65I	GGTNACC	1 cut(s)	2434
EcoRII	CCWGG	5 cut(s)	312, 1060, 1392, 2172, 2277
EcoT14I	CCWWGG	3 cut(s)	328, 876, 2188
EcoT22I	ATGCAT	2 cut(s)	1939, 2371
EcoT38I	GRGCYC	4 cut(s)	1355, 1587, 2010, 2275
ErhI	CCWWGG	3 cut(s)	328, 876, 2188
Esp3I	CGTCTC	1 cut(s)	1253
FalI	AAGNNNNNCTT	4 cut(s)	1235, 1267, 1635, 1667
FaqI	GGGAC	3 cut(s)	770, 1698, 1786
FauNDI	CATATG	3 cut(s)	1339, 2071, 2377
FbaI	TGATCA	1 cut(s)	1359
FblI	GTMKAC	2 cut(s)	2460, 2646
FriOI	GRGCYC	4 cut(s)	1355, 1587, 2010, 2275
FspBI	CTAG	6 cut(s)	537, 888, 1307, 2088, 2129, 2289
GlaI	GCGC	1 cut(s)	2178
GsuI	CTGGAG	2 cut(s)	2447, 2690
HaeII	RGCGCY	1 cut(s)	2180
HaeIII	GGCC	9 cut(s)	327, 496, 1275, 1323, 1992, 2054, 2172, 2283, 2318
HapII	CCGG	4 cut(s)	735, 1003, 2319, 2359
HgaI	GACGC	2 cut(s)	1235, 2144
HhaI	GCGC	1 cut(s)	2179
Hin1I	GRCGYC	1 cut(s)	2136
Hin6I	GCGC	1 cut(s)	2177
HinP1I	GCGC	1 cut(s)	2177
HincII	GTYRAC	3 cut(s)	1931, 2206, 2647
HindII	GTYRAC	3 cut(s)	1931, 2206, 2647
HindIII	AAGCTT	2 cut(s)	98, 1260
HinfI	GANTC	7 cut(s)	23, 35, 173, 686, 1829, 2024, 2084
HpaII	CCGG	4 cut(s)	735, 1003, 2319, 2359
HphI	GGTGA	3 cut(s)	542, 791, 2428
HpyAV	CCTTC	4 cut(s)	19, 82, 160, 736
HpyCH4IV	ACGT	1 cut(s)	1638
HpyF10VI	GCNNNNNNNGC	7 cut(s)	1021, 1183, 1268, 1298, 1532, 2228, 2549
HpyF3I	CTNAG	8 cut(s)	513, 682, 692, 1116, 1211, 1349, 1880, 2152
HpySE526I	ACGT	1 cut(s)	1638
Hsp92I	GRCGYC	1 cut(s)	2136
HspAI	GCGC	1 cut(s)	2177
KflI	GGGWCCC	1 cut(s)	1800
Ksp22I	TGATCA	1 cut(s)	1359
LmnI	GCTCC	8 cut(s)	283, 655, 1012, 1582, 1590, 1878, 2013, 2671
MaeI	CTAG	6 cut(s)	537, 888, 1307, 2088, 2129, 2289
MaeII	ACGT	1 cut(s)	1638
MaeIII	GTNAC	5 cut(s)	303, 857, 1119, 1634, 2434
MbiI	CCGCTC	1 cut(s)	2151
MfeI	CAATTG	2 cut(s)	2517, 2538
MflI	RGATCY	7 cut(s)	976, 1974, 2042, 2095, 2387, 2422, 2446
MhlI	GDGCHC	8 cut(s)	192, 484, 1355, 1587, 2010, 2275, 2595, 2617
MlyI	GAGTC	3 cut(s)	32, 44, 2078
MmeI	TCCRAC	3 cut(s)	783, 1036, 1659
Mph1103I	ATGCAT	2 cut(s)	1939, 2371
MroXI	GAANNNNTTC	1 cut(s)	978
MseI	TTAA	8 cut(s)	594, 669, 1088, 1265, 1542, 1560, 2244, 2253
MslI	CAYNNNNRTG	1 cut(s)	2682
MspA1I	CMGCKG	1 cut(s)	2231
MspCI	CTTAAG	1 cut(s)	2252
MspI	CCGG	4 cut(s)	735, 1003, 2319, 2359
MspR9I	CCNGG	7 cut(s)	314, 1004, 1062, 1394, 2174, 2279, 2359
MssI	GTTTAAAC	1 cut(s)	1561
MunI	CAATTG	2 cut(s)	2517, 2538
Mva1269I	GAATGC	2 cut(s)	2543, 2582
MvaI	CCWGG	5 cut(s)	314, 1062, 1394, 2174, 2279
MwoI	GCNNNNNNNGC	7 cut(s)	1021, 1183, 1268, 1298, 1532, 2228, 2549
NciI	CCSGG	2 cut(s)	1004, 2359
NdeI	CATATG	3 cut(s)	1339, 2071, 2377
NlaIV	GGNNCC	7 cut(s)	189, 326, 651, 1461, 1801, 1802, 2009
NmuCI	GTSAC	4 cut(s)	857, 1119, 1634, 2434
NsiI	ATGCAT	2 cut(s)	1939, 2371
NspI	RCATGY	4 cut(s)	1028, 1486, 1730, 1937
OliI	CACNNNNGTG	1 cut(s)	2682
PaeI	GCATGC	1 cut(s)	1028
PagI	TCATGA	2 cut(s)	253, 391
PceI	AGGCCT	1 cut(s)	2054
PciI	ACATGT	1 cut(s)	1482
PctI	GAATGC	2 cut(s)	2543, 2582
PdmI	GAANNNNTTC	1 cut(s)	978
PfeI	GAWTC	4 cut(s)	173, 686, 1829, 2024
PleI	GAGTC	3 cut(s)	31, 43, 2078
PmeI	GTTTAAAC	1 cut(s)	1561
PpsI	GAGTC	3 cut(s)	31, 43, 2078
PpuMI	RGGWCCY	2 cut(s)	6, 1800
PscI	ACATGT	1 cut(s)	1482
PshBI	ATTAAT	2 cut(s)	1542, 2244
PsiI	TTATAA	2 cut(s)	182, 1620
Psp124BI	GAGCTC	2 cut(s)	1355, 1587
Psp5II	RGGWCCY	2 cut(s)	6, 1800
Psp6I	CCWGG	5 cut(s)	312, 1060, 1392, 2172, 2277
PspEI	GGTNACC	1 cut(s)	2434
PspGI	CCWGG	5 cut(s)	312, 1060, 1392, 2172, 2277
PspN4I	GGNNCC	7 cut(s)	189, 326, 651, 1461, 1801, 1802, 2009
PspPI	GGNCC	7 cut(s)	6, 325, 494, 1058, 1459, 1800, 2281
PspPPI	RGGWCCY	2 cut(s)	6, 1800
PstI	CTGCAG	2 cut(s)	1273, 2485
PsuI	RGATCY	7 cut(s)	976, 1974, 2042, 2095, 2387, 2422, 2446
PvuII	CAGCTG	1 cut(s)	2231
RsaI	GTAC	4 cut(s)	541, 1079, 1391, 1711
RsaNI	GTAC	4 cut(s)	540, 1078, 1390, 1710
RseI	CAYNNNNRTG	1 cut(s)	2682
SacI	GAGCTC	2 cut(s)	1355, 1587
SalI	GTCGAC	1 cut(s)	2645
SaqAI	TTAA	8 cut(s)	594, 669, 1088, 1265, 1542, 1560, 2244, 2253
Sau96I	GGNCC	7 cut(s)	6, 325, 494, 1058, 1459, 1800, 2281
SchI	GAGTC	3 cut(s)	32, 44, 2078
ScrFI	CCNGG	7 cut(s)	314, 1004, 1062, 1394, 2174, 2279, 2359
SduI	GDGCHC	8 cut(s)	192, 484, 1355, 1587, 2010, 2275, 2595, 2617
SfcI	CTRYAG	3 cut(s)	168, 1269, 2481
SinI	GGWCC	4 cut(s)	6, 1058, 1459, 1800
SmiMI	CAYNNNNRTG	1 cut(s)	2682
SmlI	CTYRAG	7 cut(s)	263, 1219, 1439, 1521, 1610, 2252, 2572
SmoI	CTYRAG	7 cut(s)	263, 1219, 1439, 1521, 1610, 2252, 2572
SphI	GCATGC	1 cut(s)	1028
SseBI	AGGCCT	1 cut(s)	2054
SsiI	CCGC	4 cut(s)	349, 1909, 2149, 2164
SspI	AATATT	1 cut(s)	810
SspMI	CTAG	6 cut(s)	537, 888, 1307, 2088, 2129, 2289
SstI	GAGCTC	2 cut(s)	1355, 1587
StuI	AGGCCT	1 cut(s)	2054
StyD4I	CCNGG	7 cut(s)	312, 1002, 1060, 1392, 2172, 2277, 2357
StyI	CCWWGG	3 cut(s)	328, 876, 2188
TaiI	ACGT	1 cut(s)	1641
TaqI	TCGA	6 cut(s)	78, 600, 1046, 1303, 2629, 2646
TatI	WGTACW	1 cut(s)	1077
TauI	GCSGC	1 cut(s)	2151
TfiI	GAWTC	4 cut(s)	173, 686, 1829, 2024
Tru1I	TTAA	8 cut(s)	594, 669, 1088, 1265, 1542, 1560, 2244, 2253
Tru9I	TTAA	8 cut(s)	594, 669, 1088, 1265, 1542, 1560, 2244, 2253
TscAI	CASTG	7 cut(s)	391, 906, 1080, 2000, 2082, 2602, 2622
TseFI	GTSAC	4 cut(s)	857, 1119, 1634, 2434
Tsp45I	GTSAC	4 cut(s)	857, 1119, 1634, 2434
TspGWI	ACGGA	5 cut(s)	143, 350, 1577, 1709, 2000
TspRI	CASTG	7 cut(s)	391, 906, 1080, 2000, 2082, 2602, 2622
Vha464I	CTTAAG	1 cut(s)	2252
VneI	GTGCAC	2 cut(s)	480, 2613
VpaK11BI	GGWCC	4 cut(s)	6, 1058, 1459, 1800
VspI	ATTAAT	2 cut(s)	1542, 2244
XapI	RAATTY	2 cut(s)	249, 827
XbaI	TCTAGA	1 cut(s)	887
XceI	RCATGY	4 cut(s)	1028, 1486, 1730, 1937
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2594
XmiI	GTMKAC	2 cut(s)	2460, 2646
XmnI	GAANNNNTTC	1 cut(s)	978
XspI	CTAG	6 cut(s)	537, 888, 1307, 2088, 2129, 2289
Zsp2I	ATGCAT	2 cut(s)	1939, 2371

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.