Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0005018

Physical Location & Seq

Genomic Coordinates Reverse (-)

39678786 .. 39683120

Gene Structure 4335 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1279200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2679 bp

ATGAGGACTTTCTTTCCCTCTGAGTCTGGTAAAGATTCTGGTAAAGAATCACAGCTCAGTGCCCACAATCCACAGTCATGGCTCCAGGTGGAAAGAGGGAAGCTTTCCAAGCTGCCATCAAACTCCTCCTCTTCTTCTCTAGAATCTCTTATCAAAGTCCCCGAGCCGCCAATACTCCCGTTCTATAAACCAGTTGATTACGTCGAAGTTTTAGCTCAAATTCATGAAGAACTTGAGTTATGTCCTCCGCAGGGACAGTCGAATCTTTACCTGTTACAATTTCAGGTCTTTAGGGGCCTCGGAGAAGTCAAGCTGATGCGAAGAAGCCTTCGTGCAGCTTGGCAGAAAGCTAGCTCCATTCATGAGAAGCTCATATTTGGAGCATGGTTGAAGTATGAGAAGCAAGGGGAAGAGCATATTTCTGACTTACTTGCTAGTTGTGATAAATGTGCGCAAGAATTTGGTCCGGTGGATATTTTGACTCAGCTTCCTACTGATGCAACTGTGAGTAGTACCCTTGAGAATGTTTCGATGAATGGGAACGGAATATCAAGAAATGTCAGTTTTAGAATTCAAGATGAGAGGGTAGATTGTGATAGGCAGAAAATATCAAGCCTTTCTGCTCCATTTCATGCCATGCTCAATGGGTGTTTCTCGGAATCATTTCGGGAGGACATAGATTTGTCGGAAAACAATATCAGTGCATCAGGTATGAGGACAATCAATGAGTTCAGTATAACTGGCAGTTTGAATGAAGTCCCTACTCATCTTTTGTTGGAAATATTAGCTTTTGCAAATAAATTTTGTTGCGAAAAGCTTAAAGATGCTTGTGACCGGAAACTTGCATCCCTGGTGTCTACTAGAGAAGATGCGGTAGAACTCATGGAGTATGCTCTTGAAGAGAACTGTCCTGTTCTTGCTGCGTCATGCTTACAAGTTTTCTTAAATAATCTTCCTGATTGTTTGAATGACGACCGAGTGGTGGATATATTCAGGCATGCTGATAGACAACAGAGATCAATCATGGTTGGGCAAGCCTCGTTTTCGCTATATTGTTTATTAAGTGAAGTTTGTATGAACCTTGATCCACAGTCAGATAAAACAGCTTGTTTCCTGGAACGGTTGGTAGAGTTTTCTGAAAATGATAGACAAAGAATGCTGGCATTCCATCAGTTGGGATGCCTGAGGCTCTTGAGAAAAGAGTATGACGAAGCTAAGAGCCTTTTTGAAGAAGCTCTAAATGCAGGCCATATATATTCAGTTGCAGGATTAGCTAGACTGAGTTACATTAAGGGCCATAAACTTTGGTCATATGAAAAGCTGAGCTCTGTAATCTGCGCTGTTACGCCACTTGGATGGATGTATCAGGAGAGGTCCTTGTACTGTGAAGGTGATAAGAGATGGGAAGACCTTGAGAAAGCATCTGAGCTGGATCCAACTCTTACTTACCCTTACATGTATCGTGCGGCTACATTAATGAGAAAACAGAATGTTCAAGCTGCGCTTGCAGAAATTAATCGTGTTCTGGGGTTTAAACTTGCGTTAGAATGCTTGGAACTCCGGTTCTGTTTCTATCTTGCTCTTGAGGACTATAAATCAGCCATTTGTGATGTTCAAGCAATTCTTACTCTCTCCCCGAATTATAGGATGTTTGAGGGACGGGTGGCAGCATCCCAACTTCGGACACTTGTGCGTGAGCATGTAGAAAATTGGACAACGGCAGATTGTTGGCTGCAGTTGTACGATCGTTGGTCTTCAGTCGATGATATTGGGTCTCTCTCGGTTATTTACCAGATGCTTGAATCTGATGCAGCAAAAGGTGTTCTGTATTTCAGACAGTCATTGCTTCTTCTCAGGTTGAACTGTCCCGAGGCAGCAATGCGAAGTTTACAGTTAGCTCGTCAGCATGCATCCAGCGATCATGAAAAGTTGGTTTATGAGGGGTGGATCTTATACGATACAGGACATTGTGAGGAAGGGCTCCAGAAAGCAGAGGAATCCATCAAAATTAAACGATCCTTTGAGGCCTTCTTTTTGAAAGCCTATGCACTGGCAGACTCTAGCCAAGATCAATCCTCTTCATCAACTGTTGTATCTCTCCTCGAAGATGCCTTGAAGTGCCCATCAGACAGGCTGCGTAAAGGTCAAGCGCTCAACAACCTTGGAAGTGTTTATGTTGACTGCGGGAAGTTAGACTTGGCAGCTGATTGCTACATAAGTGCTCTTAAGATCAGGCATACGCGAGCGCACCAGGGCCTTGCTCGGGTTCATTTTCTCAGAAATGACAAGCCAGCTGCGTATGAGGAAATGACCAAACTGATTGAGAAGGCCCGGAACAATGCATCTGCCTATGAGAAGAGGTCCGAATATTGTGATCGCGAACTCACAAAGACTGATCTGGAGATGGTGACCCACTTAGATCCGCTTCGGGTGTACCCTTACAGATATAGAGCTGCAGTGTTAATGGATAGCCACAAAGAAGCAGAGGCCATTGCAGAACTATCAAGGGCAATTGCATTCAAAGCCGACCTCCACCTTCTGCACTTACGGGCGGCATTCCATGAGCACGTTGGAGATGTCATGGGTGCTTTGCGAGACTGTCGAGCGGCTCTCTCCGTCGACCCGAACCATCAAGAGATGCTGGAGCTTCATAGCCGTGTAAACAGCCATGAACCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0006521 GO:0008150 GO:0009889 GO:0010364 GO:0010565 GO:0010817 GO:0019222 GO:0031323 GO:0031326 GO:0031335 GO:0032350 GO:0033238 GO:0042762 GO:0046885 GO:0050789 GO:0050794 GO:0051171 GO:0062012 GO:0065007 GO:0065008 GO:0080090 GO:1900908 GO:1900911

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB TPR_8

Protein Analysis

893

Amino Acids

101.26

Weight (kDa)

5.66

Isoelectric Point (pI)

47.84

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005018)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02680
fragaria_vesca	FvH4_2g23020 FvH4_2g23020 FvH4_2g23020 FvH4_2g23020 FvH4_2g23020 FvH4_2g23020 FvH4_2g23020
malus_domestica	MD03G1258600.v1.1 MD11G1279200.v1.1
prunus_persica	Prupe.8G235100_v2.0.a1 Prupe.8G235100_v2.0.a1 Prupe.8G235100_v2.0.a1 Prupe.8G235100_v2.0.a1 Prupe.8G235100_v2.0.a1
pyrus_communis	pycom03g20480 pycom03g20560
rosa_chinensis	RchiOBHm_Chr6g0290061
rosa_laevigata	RLG00000012249
rosa_multiflora	Rmu_sc0002902.1_g000038
rosa_roxburghii	Rroxscaffold_7G00177380
rosa_rugosa	Rorug06G0209200 Rorug06G0209300 Rorug06G0209400 Rorug06G0209500
rosa_samantha	Rh6AG320100 Rh6BG327300 Rh6CG333000 Rh6DG318900
rosa_wichuraiana	Rw6G027620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	453
AccB7I	CCANNNNNTGG	1 cut(s)	1174
AccBSI	CCGCTC	1 cut(s)	2606
AccI	GTMKAC	2 cut(s)	857, 2619
AccII	CGCG	2 cut(s)	2242, 2379
AciI	CCGC	8 cut(s)	167, 248, 872, 1466, 2184, 2423, 2552, 2606
AclWI	GGATC	6 cut(s)	1079, 1427, 1440, 1955, 2010, 2414
AcsI	RAATTY	4 cut(s)	219, 458, 570, 800
AcuI	CTGAAG	1 cut(s)	1740
AfaI	GTAC	4 cut(s)	514, 1382, 1742, 2435
AfeI	AGCGCT	1 cut(s)	2151
AfiI	CCNNNNNNNGG	5 cut(s)	251, 982, 1174, 1680, 2263
AflII	CTTAAG	1 cut(s)	2225
AflIII	ACRYGT	1 cut(s)	1455
AjnI	CCWGG	4 cut(s)	84, 849, 1113, 2250
AjuI	GAANNNNNNNTTGG	2 cut(s)	2180, 2212
AloI	GAACNNNNNNTCC	2 cut(s)	1547, 1579
Alw21I	GWGCWC	3 cut(s)	1328, 2224, 2568
Alw26I	GTCTC	2 cut(s)	1779, 2589
AlwI	GGATC	6 cut(s)	1079, 1427, 1440, 1955, 2010, 2414
Ama87I	CYCGRG	3 cut(s)	161, 1868, 2262
Aor51HI	AGCGCT	1 cut(s)	2151
AoxI	GGCC	7 cut(s)	295, 1246, 1294, 2025, 2254, 2328, 2487
ApoI	RAATTY	4 cut(s)	219, 458, 570, 800
AseI	ATTAAT	2 cut(s)	1475, 1515
Asp700I	GAANNNNTTC	1 cut(s)	663
AspLEI	GCGC	5 cut(s)	454, 1340, 1504, 2152, 2248
AspS9I	GGNCC	7 cut(s)	295, 464, 1294, 1374, 2254, 2329, 2361
AsuC2I	CCSGG	1 cut(s)	2332
AsuHPI	GGTGA	2 cut(s)	1403, 2419
AsuNHI	GCTAGC	1 cut(s)	350
AvaI	CYCGRG	3 cut(s)	161, 1868, 2262
AvaII	GGWCC	3 cut(s)	464, 1374, 2361
AxyI	CCTNAGG	1 cut(s)	1184
BaeGI	GKGCMC	2 cut(s)	64, 2123
BaeI	ACNNNNGTAYC	2 cut(s)	2076, 2109
BamHI	GGATCC	1 cut(s)	1432
BanII	GRGCYC	2 cut(s)	1328, 1983
BbsI	GAAGAC	2 cut(s)	1413, 1746
Bbv12I	GWGCWC	3 cut(s)	1328, 2224, 2568
BccI	CCATC	8 cut(s)	124, 1176, 1350, 1395, 2009, 2131, 2398, 2637
BceAI	ACGGC	2 cut(s)	1734, 2640
BciT130I	CCWGG	4 cut(s)	86, 851, 1115, 2252
BcnI	CCSGG	1 cut(s)	2332
BcoDI	GTCTC	2 cut(s)	1779, 2589
BfaI	CTAG	6 cut(s)	140, 351, 435, 861, 1275, 2061
BfmI	CTRYAG	2 cut(s)	1733, 2454
BfoI	RGCGCY	1 cut(s)	2153
BfrI	CTTAAG	1 cut(s)	2225
BlpI	GCTNAGC	1 cut(s)	1322
Bme1390I	CCNGG	5 cut(s)	86, 851, 1115, 2252, 2332
Bme18I	GGWCC	3 cut(s)	464, 1374, 2361
BmeT110I	CYCGRG	3 cut(s)	161, 1868, 2262
BmgT120I	GGNCC	7 cut(s)	295, 464, 1294, 1374, 2254, 2329, 2361
BmiI	GGNNCC	4 cut(s)	83, 296, 1434, 1982
BmrFI	CCNGG	5 cut(s)	86, 851, 1115, 2252, 2332
BmtI	GCTAGC	1 cut(s)	354
BpiI	GAAGAC	2 cut(s)	1413, 1746
BplI	GAGNNNNNCTC	2 cut(s)	2595, 2627
BpmI	CTGGAG	4 cut(s)	68, 1967, 2420, 2663
Bpu1102I	GCTNAGC	1 cut(s)	1322
BpuEI	CTTGAG	5 cut(s)	254, 539, 1213, 1433, 1604
BpuMI	CCSGG	1 cut(s)	2332
BsaI	GGTCTC	1 cut(s)	1779
BsaJI	CCNNGG	5 cut(s)	298, 849, 1869, 2161, 2251
BsaWI	WCCGGW	3 cut(s)	466, 834, 1560
Bsc4I	CCNNNNNNNGG	5 cut(s)	251, 982, 1174, 1680, 2263
Bse1I	ACTGG	3 cut(s)	191, 745, 2055
Bse21I	CCTNAGG	1 cut(s)	1184
Bse3DI	GCAATG	3 cut(s)	1841, 1884, 2490
BseBI	CCWGG	4 cut(s)	86, 851, 1115, 2252
BseDI	CCNNGG	5 cut(s)	298, 849, 1869, 2161, 2251
BseGI	GGATG	7 cut(s)	845, 1184, 1361, 1365, 1653, 1670, 1910
BseLI	CCNNNNNNNGG	5 cut(s)	251, 982, 1174, 1680, 2263
BseMI	GCAATG	3 cut(s)	1841, 1884, 2490
BseMII	CTCAG	9 cut(s)	12, 70, 497, 1175, 1271, 1313, 1416, 1867, 2290
BseNI	ACTGG	3 cut(s)	191, 745, 2055
BseRI	GAGGAG	3 cut(s)	115, 118, 2090
BseSI	GKGCMC	2 cut(s)	64, 2123
BsgI	GTGCAG	2 cut(s)	354, 2525
Bsh1236I	CGCG	2 cut(s)	2242, 2379
Bsh1285I	CGRYCG	2 cut(s)	976, 1747
BshFI	GGCC	7 cut(s)	297, 1248, 1296, 2027, 2256, 2330, 2489
BsiEI	CGRYCG	2 cut(s)	976, 1747
BsiHKAI	GWGCWC	3 cut(s)	1328, 2224, 2568
BsiHKCI	CYCGRG	3 cut(s)	161, 1868, 2262
BsiSI	CCGG	4 cut(s)	467, 835, 1561, 2332
BslFI	GGGAC	5 cut(s)	143, 267, 743, 1671, 1851
BslI	CCNNNNNNNGG	5 cut(s)	251, 982, 1174, 1680, 2263
BsmAI	GTCTC	2 cut(s)	1779, 2589
BsmFI	GGGAC	5 cut(s)	143, 267, 743, 1671, 1851
BsmI	GAATGC	5 cut(s)	1161, 1163, 1553, 2516, 2555
BsnI	GGCC	7 cut(s)	297, 1248, 1296, 2027, 2256, 2330, 2489
Bso31I	GGTCTC	1 cut(s)	1779
BsoBI	CYCGRG	3 cut(s)	161, 1868, 2262
Bsp1286I	GDGCHC	6 cut(s)	64, 1328, 1983, 2123, 2224, 2568
Bsp1720I	GCTNAGC	1 cut(s)	1322
Bsp68I	TCGCGA	1 cut(s)	2379
BspACI	CCGC	8 cut(s)	167, 248, 872, 1466, 2184, 2423, 2552, 2606
BspANI	GGCC	7 cut(s)	297, 1248, 1296, 2027, 2256, 2330, 2489
BspCNI	CTCAG	9 cut(s)	13, 69, 496, 1176, 1272, 1314, 1417, 1866, 2289
BspFNI	CGCG	2 cut(s)	2242, 2379
BspHI	TCATGA	3 cut(s)	223, 361, 1921
BspLI	GGNNCC	4 cut(s)	83, 296, 1434, 1982
BspMAI	CTGCAG	2 cut(s)	1737, 2458
BspOI	GCTAGC	1 cut(s)	354
BspPI	GGATC	6 cut(s)	1079, 1427, 1440, 1955, 2010, 2414
BspQI	GCTCTTC	1 cut(s)	405
BspTI	CTTAAG	1 cut(s)	2225
BspTNI	GGTCTC	1 cut(s)	1779
BsrBI	CCGCTC	1 cut(s)	2606
BsrDI	GCAATG	3 cut(s)	1841, 1884, 2490
BsrI	ACTGG	3 cut(s)	191, 745, 2055
BssECI	CCNNGG	5 cut(s)	298, 849, 1869, 2161, 2251
BssT1I	CCWWGG	1 cut(s)	2161
Bst2UI	CCWGG	4 cut(s)	86, 851, 1115, 2252
Bst6I	CTCTTC	5 cut(s)	136, 405, 894, 2083, 2351
BstAFI	CTTAAG	1 cut(s)	2225
BstC8I	GCNNGC	9 cut(s)	352, 999, 1035, 1161, 1246, 1506, 1908, 2244, 2292
BstEII	GGTNACC	1 cut(s)	2407
BstF5I	GGATG	7 cut(s)	845, 1184, 1361, 1365, 1653, 1670, 1910
BstFNI	CGCG	2 cut(s)	2242, 2379
BstH2I	RGCGCY	1 cut(s)	2153
BstHHI	GCGC	5 cut(s)	454, 1340, 1504, 2152, 2248
BstMAI	GTCTC	2 cut(s)	1779, 2589
BstMCI	CGRYCG	2 cut(s)	976, 1747
BstMWI	GCNNNNNNNGC	5 cut(s)	109, 1241, 1271, 1505, 2522
BstNI	CCWGG	4 cut(s)	86, 851, 1115, 2252
BstNSI	RCATGY	4 cut(s)	1001, 1459, 1703, 1910
BstPI	GGTNACC	1 cut(s)	2407
BstSCI	CCNGG	5 cut(s)	84, 849, 1113, 2250, 2330
BstSFI	CTRYAG	2 cut(s)	1733, 2454
BstSLI	GKGCMC	2 cut(s)	64, 2123
BstUI	CGCG	2 cut(s)	2242, 2379
BstV2I	GAAGAC	2 cut(s)	1413, 1746
BstX2I	RGATCY	3 cut(s)	1432, 1947, 2419
BstXI	CCANNNNNNTGG	2 cut(s)	78, 1356
BstYI	RGATCY	3 cut(s)	1432, 1947, 2419
Bsu36I	CCTNAGG	1 cut(s)	1184
BsuRI	GGCC	7 cut(s)	297, 1248, 1296, 2027, 2256, 2330, 2489
BtsCI	GGATG	7 cut(s)	845, 1184, 1361, 1365, 1653, 1670, 1910
BtsI	GCAGTG	1 cut(s)	2463
BtsIMutI	CAGTG	4 cut(s)	64, 706, 2048, 2463
BtuMI	TCGCGA	1 cut(s)	2379
Cac8I	GCNNGC	9 cut(s)	352, 999, 1035, 1161, 1246, 1506, 1908, 2244, 2292
CciI	TCATGA	3 cut(s)	223, 361, 1921
CfoI	GCGC	5 cut(s)	454, 1340, 1504, 2152, 2248
Cfr13I	GGNCC	7 cut(s)	295, 464, 1294, 1374, 2254, 2329, 2361
CseI	GACGC	1 cut(s)	912
Csp6I	GTAC	4 cut(s)	513, 1381, 1741, 2434
CviQI	GTAC	4 cut(s)	513, 1381, 1741, 2434
DraI	TTTAAA	1 cut(s)	1534
Eam1104I	CTCTTC	5 cut(s)	136, 405, 894, 2083, 2351
EarI	CTCTTC	5 cut(s)	136, 405, 894, 2083, 2351
Ecl136II	GAGCTC	1 cut(s)	1326
Eco130I	CCWWGG	1 cut(s)	2161
Eco147I	AGGCCT	1 cut(s)	2027
Eco24I	GRGCYC	2 cut(s)	1328, 1983
Eco31I	GGTCTC	1 cut(s)	1779
Eco47I	GGWCC	3 cut(s)	464, 1374, 2361
Eco47III	AGCGCT	1 cut(s)	2151
Eco53kI	GAGCTC	1 cut(s)	1326
Eco57I	CTGAAG	1 cut(s)	1740
Eco81I	CCTNAGG	1 cut(s)	1184
Eco88I	CYCGRG	3 cut(s)	161, 1868, 2262
Eco91I	GGTNACC	1 cut(s)	2407
EcoICRI	GAGCTC	1 cut(s)	1326
EcoO109I	RGGNCCY	3 cut(s)	295, 1374, 2254
EcoO65I	GGTNACC	1 cut(s)	2407
EcoRI	GAATTC	1 cut(s)	570
EcoRII	CCWGG	4 cut(s)	84, 849, 1113, 2250
EcoT14I	CCWWGG	1 cut(s)	2161
EcoT22I	ATGCAT	2 cut(s)	1912, 2344
EcoT38I	GRGCYC	2 cut(s)	1328, 1983
ErhI	CCWWGG	1 cut(s)	2161
FalI	AAGNNNNNCTT	6 cut(s)	1488, 1520, 1608, 1640, 2180, 2212
FaqI	GGGAC	5 cut(s)	143, 267, 743, 1671, 1851
FauI	CCCGC	1 cut(s)	2177
FauNDI	CATATG	1 cut(s)	1312
FblI	GTMKAC	2 cut(s)	857, 2619
FokI	GGATG	7 cut(s)	832, 1191, 1368, 1372, 1657, 1660, 1897
FriOI	GRGCYC	2 cut(s)	1328, 1983
FspBI	CTAG	6 cut(s)	140, 351, 435, 861, 1275, 2061
FspI	TGCGCA	1 cut(s)	453
GlaI	GCGC	5 cut(s)	453, 1339, 1503, 2151, 2247
GsuI	CTGGAG	4 cut(s)	68, 1967, 2420, 2663
HaeII	RGCGCY	1 cut(s)	2153
HaeIII	GGCC	7 cut(s)	297, 1248, 1296, 2027, 2256, 2330, 2489
HapII	CCGG	4 cut(s)	467, 835, 1561, 2332
HgaI	GACGC	1 cut(s)	912
HhaI	GCGC	5 cut(s)	454, 1340, 1504, 2152, 2248
Hin6I	GCGC	5 cut(s)	452, 1338, 1502, 2150, 2246
HinP1I	GCGC	5 cut(s)	452, 1338, 1502, 2150, 2246
HincII	GTYRAC	2 cut(s)	2179, 2620
HindII	GTYRAC	2 cut(s)	2179, 2620
HindIII	AAGCTT	2 cut(s)	101, 815
HpaII	CCGG	4 cut(s)	467, 835, 1561, 2332
HphI	GGTGA	2 cut(s)	1403, 2419
Hpy166II	GTNNAC	6 cut(s)	858, 1889, 2179, 2434, 2620, 2662
Hpy8I	GTNNAC	6 cut(s)	858, 1889, 2179, 2434, 2620, 2662
Hpy99I	CGWCG	2 cut(s)	206, 2621
HpyAV	CCTTC	6 cut(s)	338, 1382, 1970, 2038, 2320, 2546
HpyCH4IV	ACGT	2 cut(s)	201, 2568
HpyF10VI	GCNNNNNNNGC	5 cut(s)	109, 1241, 1271, 1505, 2522
HpySE526I	ACGT	2 cut(s)	201, 2568
HspAI	GCGC	5 cut(s)	452, 1338, 1502, 2150, 2246
LguI	GCTCTTC	1 cut(s)	405
LmnI	GCTCC	6 cut(s)	87, 359, 380, 628, 1986, 2644
MaeI	CTAG	6 cut(s)	140, 351, 435, 861, 1275, 2061
MaeII	ACGT	2 cut(s)	201, 2568
MaeIII	GTNAC	5 cut(s)	273, 830, 1283, 1342, 2407
MbiI	CCGCTC	1 cut(s)	2606
MfeI	CAATTG	1 cut(s)	2511
MflI	RGATCY	3 cut(s)	1432, 1947, 2419
MhlI	GDGCHC	6 cut(s)	64, 1328, 1983, 2123, 2224, 2568
MlyI	GAGTC	3 cut(s)	32, 475, 2051
MmeI	TCCRAC	4 cut(s)	666, 756, 1460, 2551
Mph1103I	ATGCAT	2 cut(s)	1912, 2344
MroXI	GAANNNNTTC	1 cut(s)	663
MslI	CAYNNNNRTG	3 cut(s)	76, 1354, 2655
MspA1I	CMGCKG	2 cut(s)	2204, 2294
MspCI	CTTAAG	1 cut(s)	2225
MspI	CCGG	4 cut(s)	467, 835, 1561, 2332
MspR9I	CCNGG	5 cut(s)	86, 851, 1115, 2252, 2332
MssI	GTTTAAAC	1 cut(s)	1534
MunI	CAATTG	1 cut(s)	2511
Mva1269I	GAATGC	5 cut(s)	1161, 1163, 1553, 2516, 2555
MvaI	CCWGG	4 cut(s)	86, 851, 1115, 2252
MvnI	CGCG	2 cut(s)	2242, 2379
MwoI	GCNNNNNNNGC	5 cut(s)	109, 1241, 1271, 1505, 2522
NciI	CCSGG	1 cut(s)	2332
NdeI	CATATG	1 cut(s)	1312
NheI	GCTAGC	1 cut(s)	350
NlaIV	GGNNCC	4 cut(s)	83, 296, 1434, 1982
NmuCI	GTSAC	2 cut(s)	830, 2407
NruI	TCGCGA	1 cut(s)	2379
NsbI	TGCGCA	1 cut(s)	453
NsiI	ATGCAT	2 cut(s)	1912, 2344
NspI	RCATGY	4 cut(s)	1001, 1459, 1703, 1910
PaeI	GCATGC	2 cut(s)	1001, 1910
PagI	TCATGA	3 cut(s)	223, 361, 1921
PceI	AGGCCT	1 cut(s)	2027
PciI	ACATGT	1 cut(s)	1455
PciSI	GCTCTTC	1 cut(s)	405
PctI	GAATGC	5 cut(s)	1161, 1163, 1553, 2516, 2555
PdmI	GAANNNNTTC	1 cut(s)	663
PfeI	GAWTC	7 cut(s)	35, 47, 143, 262, 659, 1802, 1997
PflMI	CCANNNNNTGG	1 cut(s)	1174
PfoI	TCCNGGA	1 cut(s)	1113
Ple19I	CGATCG	1 cut(s)	1747
PleI	GAGTC	3 cut(s)	31, 475, 2051
PmeI	GTTTAAAC	1 cut(s)	1534
PpsI	GAGTC	3 cut(s)	31, 475, 2051
PpuMI	RGGWCCY	1 cut(s)	1374
PscI	ACATGT	1 cut(s)	1455
PshBI	ATTAAT	2 cut(s)	1475, 1515
Psp124BI	GAGCTC	1 cut(s)	1328
Psp5II	RGGWCCY	1 cut(s)	1374
Psp6I	CCWGG	4 cut(s)	84, 849, 1113, 2250
PspEI	GGTNACC	1 cut(s)	2407
PspGI	CCWGG	4 cut(s)	84, 849, 1113, 2250
PspN4I	GGNNCC	4 cut(s)	83, 296, 1434, 1982
PspPI	GGNCC	7 cut(s)	295, 464, 1294, 1374, 2254, 2329, 2361
PspPPI	RGGWCCY	1 cut(s)	1374
PstI	CTGCAG	2 cut(s)	1737, 2458
PsuI	RGATCY	3 cut(s)	1432, 1947, 2419
PvuI	CGATCG	1 cut(s)	1747
PvuII	CAGCTG	2 cut(s)	2204, 2294
RruI	TCGCGA	1 cut(s)	2379
RsaI	GTAC	4 cut(s)	514, 1382, 1742, 2435
RsaNI	GTAC	4 cut(s)	513, 1381, 1741, 2434
RseI	CAYNNNNRTG	3 cut(s)	76, 1354, 2655
SacI	GAGCTC	1 cut(s)	1328
SalI	GTCGAC	1 cut(s)	2618
SapI	GCTCTTC	1 cut(s)	405
Sau96I	GGNCC	7 cut(s)	295, 464, 1294, 1374, 2254, 2329, 2361
SchI	GAGTC	3 cut(s)	32, 475, 2051
ScrFI	CCNGG	5 cut(s)	86, 851, 1115, 2252, 2332
SduI	GDGCHC	6 cut(s)	64, 1328, 1983, 2123, 2224, 2568
SfcI	CTRYAG	2 cut(s)	1733, 2454
SinI	GGWCC	3 cut(s)	464, 1374, 2361
SmiMI	CAYNNNNRTG	3 cut(s)	76, 1354, 2655
SmlI	CTYRAG	6 cut(s)	233, 518, 1192, 1412, 1583, 2225
SmoI	CTYRAG	6 cut(s)	233, 518, 1192, 1412, 1583, 2225
SphI	GCATGC	2 cut(s)	1001, 1910
SseBI	AGGCCT	1 cut(s)	2027
SsiI	CCGC	8 cut(s)	167, 248, 872, 1466, 2184, 2423, 2552, 2606
SspI	AATATT	2 cut(s)	783, 2369
SspMI	CTAG	6 cut(s)	140, 351, 435, 861, 1275, 2061
SstI	GAGCTC	1 cut(s)	1328
StuI	AGGCCT	1 cut(s)	2027
StyD4I	CCNGG	5 cut(s)	84, 849, 1113, 2250, 2330
StyI	CCWWGG	1 cut(s)	2161
TaiI	ACGT	2 cut(s)	204, 2571
TaqI	TCGA	7 cut(s)	204, 260, 530, 1761, 2103, 2602, 2619
TaqII	GACCGA	1 cut(s)	990
TatI	WGTACW	1 cut(s)	1380
TauI	GCSGC	4 cut(s)	169, 1469, 2555, 2609
TfiI	GAWTC	7 cut(s)	35, 47, 143, 262, 659, 1802, 1997
TscAI	CASTG	4 cut(s)	64, 706, 2055, 2463
TseFI	GTSAC	2 cut(s)	830, 2407
Tsp45I	GTSAC	2 cut(s)	830, 2407
TspGWI	ACGGA	2 cut(s)	558, 2605
TspRI	CASTG	4 cut(s)	64, 706, 2055, 2463
Van91I	CCANNNNNTGG	1 cut(s)	1174
Vha464I	CTTAAG	1 cut(s)	2225
VpaK11BI	GGWCC	3 cut(s)	464, 1374, 2361
VspI	ATTAAT	2 cut(s)	1475, 1515
XapI	RAATTY	4 cut(s)	219, 458, 570, 800
XbaI	TCTAGA	1 cut(s)	139
XceI	RCATGY	4 cut(s)	1001, 1459, 1703, 1910
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2567
XmiI	GTMKAC	2 cut(s)	857, 2619
XmnI	GAANNNNTTC	1 cut(s)	663
XspI	CTAG	6 cut(s)	140, 351, 435, 861, 1275, 2061
Zsp2I	ATGCAT	2 cut(s)	1912, 2344

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.