Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0008448

Physical Location & Seq

Genomic Coordinates Reverse (-)

34937891 .. 34941935

Gene Structure 4045 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1263800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2625 bp

ATGATCATGGAGAGAAGCAGAGAAACAAGAAGGCCAACCATGGCAGCAAGCAAAAAACAGAAGAGAATCGTGAAAGAACAGAGCAAAAAACAGAGGAGGTACAGAGGAGGAGATCAAGATCAAGAGAGCACAGAAAAGAGCTTGGGTTTTTCCGACCACCAAGTTACGCCGCCGCTAAAAGCTGCCCGTGAAATGATAGGAGTTTCAGTTCCCAGAAAAGCTCGCTCAGCTGCTGGAAAGAGGTCGCATGAAAATTTCTCTTCTGGGAGTTATGGAGGAGTTGGGGAGGAAGAACAGAGTTTTCAGCAGCAGAGATTCAAGGCTGCGTCGCTTTCTTTCTCAAATGTTTCATCAAGGAAGAAGATGAAGCCAAATGGACCCAAGATTCGGATTCCAAACCAGTCGAAATCTTCAGGGCCTGTAGAAGAGGAAGACGCCATTGAGATTGAGATCGCTGAGGTTCTCTATGGCCTTATGAAGCAAACCCAGAATTCGAAAACTTCGAATTTCGAAGCTAAATGTAGAAATGACTCCGAGGAGAAGAAACCGGATGCTGAAAGTGCTTCAATGGCGGTTCAAAGCAGCTCAGTGGCTGAAGCAGTTGAAGTTGAAGAAAGTGACCGGCCGGAAAAGATTGAAGGTTGCTCTGAAGGTGCATCAGGGTCAATGGACTCGCACGAGGAGAAAGCCGGAAATCCATACGTGGAAGAAAAGAGCAGCATCGCCACAGAAGCCGAGTTTCCGTGGGAAGATTCGACAGGGACAAACGCGATTTCAACTGGGTTGGAGCTTAAGAGGAAGGGAGAGGAGGAAAGGTTTGAATTTGATCTGATGGCTCCTCCGCCGGTGGAGCAGGATGACGACTTGACAGATTCTCCACCTCCTACCCAAGATTTAGATATGAAGATTGAAGTTATGGTCAAGAACGAAGAGAAAGGGGAAACATTTGCGGAGGAAGTTGCGCTAGAAAAATCGCAACAGAAGCTTAATGACAATCCAAATCAAGATAGTACCAGTAAATCCACTGCGACGTTGCAGCCTTCCGATTCCCTTCTGTTTCAGCTGCAGCGGAAGAGATGCGCAACCCACCGTCACATTGCTCACAACATTTACTTGCATCAGAAGGTTGCAAAGACAAGCGATTTCTGGCCGGCAGCAACTGGTTCTGTTCCTCTTTGTGGCACCAAGCCAGATATCCCATTGCCGGGAAGCTTATCAGGTCCAAATCTTCAGCATTCGCAGAAAAAGGAGCAGGCTGCGTCGAAGTTTTTAAGTCATAGTGGAAAGGAAAGAAGTTCCGAGGCTGCAAATTTCGTAGAGACATCACATAAAATGCAGCTTTCAGTTCAGCCAGCCTATGCTGGTAGTCATATGCATGGACACACTTTCGCGGTTGAGGATCAAACAACAGTTACACCAACCAGTAATCAATCCGTCCCGTTGAAATATGCGCAATCAAAAAACAATGCAGCACTCTCTAGTCATTCATCTGCTAGACCTCTGGAGAGTTCTTTAGTGAACTTTAATGGCTATCAATTCCCTGTTTCAACTCATATAGGAACAACACCAGTGTTTGGAAGAGGAAACCCTGCTCAAGTATTGCCTGTATTTAACACGCCTTTCTATTCAAATCAAATGTTCCACCCTTCCTATGTTCAGCATCAAGTCCAACCATCTCATCAAAACGCAAACACTTCATCGCCTTCTCACAGGCAACATGAGTCCCATAAACTGAGGGAAGCACAATTTAGTAGCAACAGTTTTTTTACCTCACAAAAGCAGCATGTCTCACCATCGCCTCAACAATGCAAGCTCGAGGGTGAAGCGTACGTAGAGAATGCTGCATCTCCTGCTGCCGCTCATGCTCAGAACAGTGTTTATGGGCAGACTTTTTCGGTTCCATTTCAACCCGTCAACTTTACCTTGATGCCTTATGTGACAATGGGTGGTGGTGGCAATGGAAACCGTGTTGAACAATCACAGCAGCAGGGCTTAAATGGTGGAGTTGAGCTCATCCCATCTAAGGCATTTGGCATATCATTTTCCACCGTCACTGGAAACAACGGCTCGGGTACATGTTTGAATTTTTCATCCAGGGAACAAAATCCTGCAATATTTCAAAGCCTCCCAGATATGGCCCAGCACGGGTATAAAATCACACCAGCACCTCAAGCTGCACAGCAAAAGAATCACCACCACCAAGTATCCCAAGGGAAGACCGATGGTGGTTCGAATAACGCTGAAGATGGGTCAAGAGCTGCTTCTGGGAAGTCTTCATCAGGTATTGGGCAGAAGCAGACCCTTGTTTTCGACAATTCATCGAGAACTCTCAACTTCATGTCATCAAATTCTCAACAGCAGAACATGTTCCAGTTTCAGCTGCAGAACCCACATCTGTTGCAAAAGCAGCAACCTGCTATTGCCGCCAAAGTCCCGAAAAGCCCCCCAGTTTCCTCACAAGCTCTAATACAACGCAATAGTCATCACCAATCTCCTCAGTTGAAGAACTCAACAGTCATGAGTTTTCCCCTGCAACAAGGAAGAGGTTCACAAGGTCAGACTCAGATATCGTTCGGGAAACCCGAAATCAGCCTTAGCACCACAAGGGCAACAGAGACCCACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

875

Amino Acids

95.59

Weight (kDa)

7.75

Isoelectric Point (pI)

60.26

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008448)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G63180 AT3G63180
fragaria_vesca	FvH4_2g23490 FvH4_2g23490
malus_domestica	MD03G1263800.v1.1 MD11G1284500.v1.1
prunus_persica	Prupe.8G240200_v2.0.a1 Prupe.8G240200_v2.0.a1 Prupe.8G240200_v2.0.a1
pyrus_communis	pycom03g21150 pycom11g25200
rosa_chinensis	RchiOBHm_Chr6g0290961
rosa_laevigata	RLG00000012160
rosa_multiflora	Rmu_sc0001577.1_g000015
rosa_roxburghii	Rroxscaffold_7G00176510
rosa_rugosa	Rorug06G0216500 Rorug06G0216600 Rorug06G0216700
rosa_samantha	Rh6AG326400 Rh6BG334000 Rh6CG340100 Rh6DG327300
rosa_wichuraiana	Rw6G028380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	1081, 1452
Acc36I	ACCTGC	1 cut(s)	2422
AccB1I	GGYRCC	1 cut(s)	1181
AccB7I	CCANNNNNTGG	1 cut(s)	1574
AccBSI	CCGCTC	1 cut(s)	1859
AccII	CGCG	2 cut(s)	770, 1391
AciI	CCGC	9 cut(s)	170, 173, 572, 842, 950, 1069, 1391, 1857, 2424
AclWI	GGATC	1 cut(s)	1407
AcoI	YGGCCR	2 cut(s)	623, 1148
AcsI	RAATTY	7 cut(s)	253, 490, 505, 821, 1309, 2083, 2347
AcuI	CTGAAG	5 cut(s)	396, 615, 669, 1214, 2262
AcyI	GRCGYC	1 cut(s)	435
AfaI	GTAC	4 cut(s)	101, 1012, 1829, 2074
AfiI	CCNNNNNNNGG	8 cut(s)	387, 1178, 1204, 1205, 1574, 2023, 2134, 2145
AflII	CTTAAG	1 cut(s)	791
AflIII	ACRYGT	2 cut(s)	2075, 2364
AjnI	CCWGG	1 cut(s)	2093
AloI	GAACNNNNNNTCC	2 cut(s)	192, 224
Alw21I	GWGCWC	2 cut(s)	131, 2013
Alw26I	GTCTC	3 cut(s)	1313, 1792, 2609
AlwI	GGATC	1 cut(s)	1407
AlwNI	CAGNNNCTG	4 cut(s)	233, 419, 593, 1160
Ama87I	CYCGRG	2 cut(s)	1814, 2068
AoxI	GGCC	6 cut(s)	32, 416, 469, 623, 1148, 2136
ApoI	RAATTY	7 cut(s)	253, 490, 505, 821, 1309, 2083, 2347
ArsI	GACNNNNNNTTYG	2 cut(s)	369, 401
Asp700I	GAANNNNTTC	2 cut(s)	2366, 2545
AspLEI	GCGC	3 cut(s)	964, 1082, 1453
AspS9I	GGNCC	4 cut(s)	377, 416, 1220, 2137
AsuC2I	CCSGG	1 cut(s)	1206
AsuHPI	GGTGA	4 cut(s)	1782, 1832, 2183, 2477
AsuII	TTCGAA	4 cut(s)	494, 503, 510, 2231
AvaI	CYCGRG	2 cut(s)	1814, 2068
AvaII	GGWCC	2 cut(s)	377, 1220
BanI	GGYRCC	1 cut(s)	1181
BanII	GRGCYC	1 cut(s)	2013
BauI	CACGAG	1 cut(s)	677
BbsI	GAAGAC	3 cut(s)	438, 2222, 2265
Bbv12I	GWGCWC	2 cut(s)	131, 2013
BbvCI	CCTCAGC	1 cut(s)	456
BccI	CCATC	6 cut(s)	826, 1681, 1801, 2026, 2216, 2240
BceAI	ACGGC	1 cut(s)	2080
BciT130I	CCWGG	1 cut(s)	2095
BciVI	GTATCC	1 cut(s)	2215
BclI	TGATCA	1 cut(s)	3
BcnI	CCSGG	1 cut(s)	1206
BcoDI	GTCTC	3 cut(s)	1313, 1792, 2609
BfaI	CTAG	4 cut(s)	965, 1479, 1494, 2623
BfmI	CTRYAG	3 cut(s)	420, 1064, 2381
BfrI	CTTAAG	1 cut(s)	791
BfuAI	ACCTGC	1 cut(s)	2422
BfuI	GTATCC	1 cut(s)	2215
BlpI	GCTNAGC	1 cut(s)	226
Bme1390I	CCNGG	2 cut(s)	1206, 2095
Bme18I	GGWCC	2 cut(s)	377, 1220
BmeT110I	CYCGRG	2 cut(s)	1814, 2068
BmgT120I	GGNCC	4 cut(s)	377, 416, 1220, 2137
BmiI	GGNNCC	4 cut(s)	379, 837, 1183, 1899
BmrFI	CCNGG	2 cut(s)	1206, 2095
BmrI	ACTGGG	2 cut(s)	789, 2441
BmsI	GCATC	8 cut(s)	541, 665, 729, 1067, 1126, 1669, 1853, 1917
BmuI	ACTGGG	2 cut(s)	789, 2441
BpiI	GAAGAC	3 cut(s)	438, 2222, 2265
BplI	GAGNNNNNCTC	2 cut(s)	1995, 2027
BpmI	CTGGAG	1 cut(s)	1523
Bpu10I	CCTNAGC	2 cut(s)	456, 2594
Bpu1102I	GCTNAGC	1 cut(s)	226
Bpu14I	TTCGAA	4 cut(s)	494, 503, 510, 2231
BpuEI	CTTGAG	2 cut(s)	1578, 2154
BpuMI	CCSGG	1 cut(s)	1206
BsaAI	YACGTR	2 cut(s)	703, 1831
BsaBI	GATNNNNATC	2 cut(s)	117, 449
BsaHI	GRCGYC	1 cut(s)	435
BsaI	GGTCTC	1 cut(s)	2609
BsaJI	CCNNGG	6 cut(s)	39, 534, 743, 1299, 2094, 2209
BsaWI	WCCGGW	1 cut(s)	547
BsaXI	ACNNNNNCTCC	6 cut(s)	192, 222, 800, 830, 859, 889
Bsc4I	CCNNNNNNNGG	8 cut(s)	387, 1178, 1204, 1205, 1574, 2023, 2134, 2145
Bse118I	RCCGGY	3 cut(s)	621, 844, 1150
Bse1I	ACTGG	9 cut(s)	400, 784, 1014, 1165, 1422, 1568, 2059, 2371, 2447
Bse3DI	GCAATG	3 cut(s)	1095, 1199, 1963
Bse8I	GATNNNNATC	2 cut(s)	117, 449
BseBI	CCWGG	1 cut(s)	2095
BseDI	CCNNGG	6 cut(s)	39, 534, 743, 1299, 2094, 2209
BseGI	GGATG	4 cut(s)	556, 862, 2013, 2090
BseJI	GATNNNNATC	2 cut(s)	117, 449
BseLI	CCNNNNNNNGG	8 cut(s)	387, 1178, 1204, 1205, 1574, 2023, 2134, 2145
BseMI	GCAATG	3 cut(s)	1095, 1199, 1963
BseMII	CTCAG	7 cut(s)	240, 447, 600, 1724, 1880, 2510, 2576
BseNI	ACTGG	9 cut(s)	400, 784, 1014, 1165, 1422, 1568, 2059, 2371, 2447
BseRI	GAGGAG	9 cut(s)	109, 120, 123, 291, 551, 695, 821, 828, 2484
BseX3I	CGGCCG	1 cut(s)	623
BseYI	CCCAGC	1 cut(s)	2139
BsgI	GTGCAG	1 cut(s)	2160
Bsh1236I	CGCG	2 cut(s)	770, 1391
Bsh1285I	CGRYCG	1 cut(s)	626
BshFI	GGCC	6 cut(s)	34, 418, 471, 625, 1150, 2138
BshNI	GGYRCC	1 cut(s)	1181
BsiEI	CGRYCG	1 cut(s)	626
BsiHKAI	GWGCWC	2 cut(s)	131, 2013
BsiHKCI	CYCGRG	2 cut(s)	1814, 2068
BsiSI	CCGG	7 cut(s)	548, 622, 626, 690, 845, 1151, 1205
BsiWI	CGTACG	1 cut(s)	1827
BslFI	GGGAC	4 cut(s)	775, 1421, 1708, 2417
BslI	CCNNNNNNNGG	8 cut(s)	387, 1178, 1204, 1205, 1574, 2023, 2134, 2145
BsmAI	GTCTC	3 cut(s)	1313, 1792, 2609
BsmFI	GGGAC	4 cut(s)	775, 1421, 1708, 2417
BsmI	GAATGC	2 cut(s)	1234, 1843
BsnI	GGCC	6 cut(s)	34, 418, 471, 625, 1150, 2138
Bso31I	GGTCTC	1 cut(s)	2609
BsoBI	CYCGRG	2 cut(s)	1814, 2068
Bsp119I	TTCGAA	4 cut(s)	494, 503, 510, 2231
Bsp1286I	GDGCHC	2 cut(s)	131, 2013
Bsp143I	GATC	6 cut(s)	3, 112, 118, 450, 826, 1399
Bsp1720I	GCTNAGC	1 cut(s)	226
Bsp19I	CCATGG	1 cut(s)	39
BspACI	CCGC	9 cut(s)	170, 173, 572, 842, 950, 1069, 1391, 1857, 2424
BspANI	GGCC	6 cut(s)	34, 418, 471, 625, 1150, 2138
BspCNI	CTCAG	7 cut(s)	239, 448, 599, 1725, 1879, 2509, 2575
BspFNI	CGCG	2 cut(s)	770, 1391
BspHI	TCATGA	1 cut(s)	2517
BspLI	GGNNCC	4 cut(s)	379, 837, 1183, 1899
BspMAI	CTGCAG	2 cut(s)	1068, 2385
BspMI	ACCTGC	1 cut(s)	2422
BspPI	GGATC	1 cut(s)	1407
BspT104I	TTCGAA	4 cut(s)	494, 503, 510, 2231
BspT107I	GGYRCC	1 cut(s)	1181
BspTI	CTTAAG	1 cut(s)	791
BspTNI	GGTCTC	1 cut(s)	2609
BsrBI	CCGCTC	1 cut(s)	1859
BsrDI	GCAATG	3 cut(s)	1095, 1199, 1963
BsrFI	RCCGGY	3 cut(s)	621, 844, 1150
BsrI	ACTGG	9 cut(s)	400, 784, 1014, 1165, 1422, 1568, 2059, 2371, 2447
BssAI	RCCGGY	3 cut(s)	621, 844, 1150
BssECI	CCNNGG	6 cut(s)	39, 534, 743, 1299, 2094, 2209
BssMI	GATC	6 cut(s)	3, 112, 118, 450, 826, 1399
BssNI	GRCGYC	1 cut(s)	435
BssSI	CACGAG	1 cut(s)	677
BssT1I	CCWWGG	2 cut(s)	39, 2209
Bst2BI	CACGAG	1 cut(s)	677
Bst2UI	CCWGG	1 cut(s)	2095
Bst4CI	ACNGT	7 cut(s)	1091, 1411, 1760, 1874, 1967, 2050, 2515
Bst6I	CTCTTC	7 cut(s)	56, 265, 420, 924, 1067, 1573, 2536
BstACI	GRCGYC	1 cut(s)	435
BstAFI	CTTAAG	1 cut(s)	791
BstAPI	GCANNNNNTGC	1 cut(s)	1850
BstBAI	YACGTR	2 cut(s)	703, 1831
BstBI	TTCGAA	4 cut(s)	494, 503, 510, 2231
BstC8I	GCNNGC	6 cut(s)	49, 223, 1152, 1254, 1353, 1811
BstDEI	CTNAG	9 cut(s)	226, 456, 586, 1733, 1866, 2022, 2496, 2562, 2594
BstDSI	CCRYGG	2 cut(s)	39, 743
BstF5I	GGATG	4 cut(s)	556, 862, 2013, 2090
BstFNI	CGCG	2 cut(s)	770, 1391
BstHHI	GCGC	3 cut(s)	964, 1082, 1453
BstKTI	GATC	6 cut(s)	6, 115, 121, 453, 829, 1402
BstMAI	GTCTC	3 cut(s)	1313, 1792, 2609
BstMBI	GATC	6 cut(s)	3, 112, 118, 450, 826, 1399
BstMCI	CGRYCG	1 cut(s)	626
BstNI	CCWGG	1 cut(s)	2095
BstNSI	RCATGY	3 cut(s)	1787, 2079, 2368
BstSCI	CCNGG	2 cut(s)	1204, 2093
BstSFI	CTRYAG	3 cut(s)	420, 1064, 2381
BstSNI	TACGTA	1 cut(s)	1831
BstUI	CGCG	2 cut(s)	770, 1391
BstV2I	GAAGAC	3 cut(s)	438, 2222, 2265
BstZI	CGGCCG	1 cut(s)	623
BsuI	GTATCC	1 cut(s)	2215
BsuRI	GGCC	6 cut(s)	34, 418, 471, 625, 1150, 2138
BtgI	CCRYGG	2 cut(s)	39, 743
BtgZI	GCGATG	3 cut(s)	706, 1683, 1779
BtsCI	GGATG	4 cut(s)	556, 862, 2013, 2090
BtsI	GCAGTG	1 cut(s)	1023
BtsIMutI	CAGTG	5 cut(s)	594, 1023, 1575, 1879, 2052
BveI	ACCTGC	1 cut(s)	2422
Cac8I	GCNNGC	6 cut(s)	49, 223, 1152, 1254, 1353, 1811
CaiI	CAGNNNCTG	4 cut(s)	233, 419, 593, 1160
CciI	TCATGA	1 cut(s)	2517
CfoI	GCGC	3 cut(s)	964, 1082, 1453
Cfr10I	RCCGGY	3 cut(s)	621, 844, 1150
Cfr13I	GGNCC	4 cut(s)	377, 416, 1220, 2137
CseI	GACGC	3 cut(s)	315, 443, 1248
Csp6I	GTAC	4 cut(s)	100, 1011, 1828, 2073
CspCI	CAANNNNNGTGG	2 cut(s)	2379, 2414
CviQI	GTAC	4 cut(s)	100, 1011, 1828, 2073
DdeI	CTNAG	9 cut(s)	226, 456, 586, 1733, 1866, 2022, 2496, 2562, 2594
DpnI	GATC	6 cut(s)	5, 114, 120, 452, 828, 1401
DpnII	GATC	6 cut(s)	3, 112, 118, 450, 826, 1399
EaeI	YGGCCR	2 cut(s)	623, 1148
EagI	CGGCCG	1 cut(s)	623
Eam1104I	CTCTTC	7 cut(s)	56, 265, 420, 924, 1067, 1573, 2536
EarI	CTCTTC	7 cut(s)	56, 265, 420, 924, 1067, 1573, 2536
EciI	GGCGGA	1 cut(s)	831
Ecl136II	GAGCTC	1 cut(s)	2011
EclXI	CGGCCG	1 cut(s)	623
Eco105I	TACGTA	1 cut(s)	1831
Eco130I	CCWWGG	2 cut(s)	39, 2209
Eco24I	GRGCYC	1 cut(s)	2013
Eco31I	GGTCTC	1 cut(s)	2609
Eco32I	GATATC	2 cut(s)	1195, 2568
Eco47I	GGWCC	2 cut(s)	377, 1220
Eco52I	CGGCCG	1 cut(s)	623
Eco53kI	GAGCTC	1 cut(s)	2011
Eco57I	CTGAAG	5 cut(s)	396, 615, 669, 1214, 2262
Eco88I	CYCGRG	2 cut(s)	1814, 2068
EcoICRI	GAGCTC	1 cut(s)	2011
EcoO109I	RGGNCCY	1 cut(s)	416
EcoRI	GAATTC	1 cut(s)	490
EcoRII	CCWGG	1 cut(s)	2093
EcoRV	GATATC	2 cut(s)	1195, 2568
EcoT14I	CCWWGG	2 cut(s)	39, 2209
EcoT22I	ATGCAT	1 cut(s)	1377
EcoT38I	GRGCYC	1 cut(s)	2013
ErhI	CCWWGG	2 cut(s)	39, 2209
FalI	AAGNNNNNCTT	2 cut(s)	2245, 2277
FaqI	GGGAC	4 cut(s)	775, 1421, 1708, 2417
FauNDI	CATATG	1 cut(s)	1371
FbaI	TGATCA	1 cut(s)	3
FokI	GGATG	4 cut(s)	563, 869, 2000, 2077
FriOI	GRGCYC	1 cut(s)	2013
FspBI	CTAG	4 cut(s)	965, 1479, 1494, 2623
FspI	TGCGCA	2 cut(s)	1081, 1452
GlaI	GCGC	3 cut(s)	963, 1081, 1452
GsaI	CCCAGC	1 cut(s)	2143
GsuI	CTGGAG	1 cut(s)	1523
HaeIII	GGCC	6 cut(s)	34, 418, 471, 625, 1150, 2138
HapII	CCGG	7 cut(s)	548, 622, 626, 690, 845, 1151, 1205
HgaI	GACGC	3 cut(s)	315, 443, 1248
HhaI	GCGC	3 cut(s)	964, 1082, 1453
Hin1I	GRCGYC	1 cut(s)	435
Hin6I	GCGC	3 cut(s)	962, 1080, 1451
HinP1I	GCGC	3 cut(s)	962, 1080, 1451
HincII	GTYRAC	1 cut(s)	1915
HindII	GTYRAC	1 cut(s)	1915
HindIII	AAGCTT	2 cut(s)	983, 1210
HpaII	CCGG	7 cut(s)	548, 622, 626, 690, 845, 1151, 1205
HphI	GGTGA	4 cut(s)	1782, 1832, 2183, 2477
Hpy166II	GTNNAC	3 cut(s)	1519, 1915, 2549
Hpy8I	GTNNAC	3 cut(s)	1519, 1915, 2549
Hpy99I	CGWCG	3 cut(s)	331, 1033, 1264
HpyAV	CCTTC	9 cut(s)	24, 632, 644, 793, 1050, 1061, 1117, 1656, 1713
HpyCH4III	ACNGT	7 cut(s)	1091, 1411, 1760, 1874, 1967, 2050, 2515
HpyCH4IV	ACGT	3 cut(s)	702, 1031, 1830
HpyF3I	CTNAG	9 cut(s)	226, 456, 586, 1733, 1866, 2022, 2496, 2562, 2594
HpySE526I	ACGT	3 cut(s)	702, 1031, 1830
Hsp92I	GRCGYC	1 cut(s)	435
HspAI	GCGC	3 cut(s)	962, 1080, 1451
KroI	GCCGGC	1 cut(s)	1150
KroNI	GCCGGC	1 cut(s)	1152
Ksp22I	TGATCA	1 cut(s)	3
Kzo9I	GATC	6 cut(s)	3, 112, 118, 450, 826, 1399
LmnI	GCTCC	4 cut(s)	787, 841, 850, 1249
LweI	GCATC	8 cut(s)	541, 665, 729, 1067, 1126, 1669, 1853, 1917
MaeI	CTAG	4 cut(s)	965, 1479, 1494, 2623
MaeII	ACGT	3 cut(s)	702, 1031, 1830
MaeIII	GTNAC	6 cut(s)	163, 617, 1091, 1411, 1936, 2050
MalI	GATC	6 cut(s)	5, 114, 120, 452, 828, 1401
MbiI	CCGCTC	1 cut(s)	1859
MboI	GATC	6 cut(s)	3, 112, 118, 450, 826, 1399
MhlI	GDGCHC	2 cut(s)	131, 2013
MlyI	GAGTC	4 cut(s)	524, 665, 1730, 2554
MmeI	TCCRAC	3 cut(s)	177, 765, 1693
Mph1103I	ATGCAT	1 cut(s)	1377
MroNI	GCCGGC	1 cut(s)	1150
MroXI	GAANNNNTTC	2 cut(s)	2366, 2545
MseI	TTAA	6 cut(s)	792, 987, 1271, 1524, 1611, 1994
MslI	CAYNNNNRTG	1 cut(s)	1374
MspA1I	CMGCKG	4 cut(s)	230, 1063, 1069, 2380
MspCI	CTTAAG	1 cut(s)	791
MspI	CCGG	7 cut(s)	548, 622, 626, 690, 845, 1151, 1205
MspR9I	CCNGG	2 cut(s)	1206, 2095
Mva1269I	GAATGC	2 cut(s)	1234, 1843
MvaI	CCWGG	1 cut(s)	2095
MvnI	CGCG	2 cut(s)	770, 1391
NaeI	GCCGGC	1 cut(s)	1152
NciI	CCSGG	1 cut(s)	1206
NcoI	CCATGG	1 cut(s)	39
NdeI	CATATG	1 cut(s)	1371
NdeII	GATC	6 cut(s)	3, 112, 118, 450, 826, 1399
NgoMIV	GCCGGC	1 cut(s)	1150
NlaIV	GGNNCC	4 cut(s)	379, 837, 1183, 1899
NmeAIII	GCCGAG	1 cut(s)	760
NmuCI	GTSAC	4 cut(s)	617, 1091, 1936, 2050
NsbI	TGCGCA	2 cut(s)	1081, 1452
NsiI	ATGCAT	1 cut(s)	1377
NspI	RCATGY	3 cut(s)	1787, 2079, 2368
NspV	TTCGAA	4 cut(s)	494, 503, 510, 2231
PaeR7I	CTCGAG	1 cut(s)	1814
PagI	TCATGA	1 cut(s)	2517
PciI	ACATGT	2 cut(s)	2075, 2364
PcsI	WCGNNNNNNNCGW	2 cut(s)	500, 2580
PctI	GAATGC	2 cut(s)	1234, 1843
PdiI	GCCGGC	1 cut(s)	1152
PdmI	GAANNNNTTC	2 cut(s)	2366, 2545
PfeI	GAWTC	8 cut(s)	66, 315, 385, 391, 752, 872, 1046, 2188
Pfl23II	CGTACG	1 cut(s)	1827
PflMI	CCANNNNNTGG	1 cut(s)	1574
PleI	GAGTC	4 cut(s)	524, 665, 1729, 2554
PpsI	GAGTC	4 cut(s)	524, 665, 1729, 2554
Ppu21I	YACGTR	2 cut(s)	703, 1831
PscI	ACATGT	2 cut(s)	2075, 2364
Psp124BI	GAGCTC	1 cut(s)	2013
Psp6I	CCWGG	1 cut(s)	2093
PspFI	CCCAGC	1 cut(s)	2139
PspGI	CCWGG	1 cut(s)	2093
PspLI	CGTACG	1 cut(s)	1827
PspN4I	GGNNCC	4 cut(s)	379, 837, 1183, 1899
PspPI	GGNCC	4 cut(s)	377, 416, 1220, 2137
PspXI	VCTCGAGB	1 cut(s)	1814
PstI	CTGCAG	2 cut(s)	1068, 2385
PstNI	CAGNNNCTG	4 cut(s)	233, 419, 593, 1160
PvuII	CAGCTG	3 cut(s)	230, 1063, 2380
RsaI	GTAC	4 cut(s)	101, 1012, 1829, 2074
RsaNI	GTAC	4 cut(s)	100, 1011, 1828, 2073
RseI	CAYNNNNRTG	1 cut(s)	1374
SacI	GAGCTC	1 cut(s)	2013
SaqAI	TTAA	6 cut(s)	792, 987, 1271, 1524, 1611, 1994
Sau3AI	GATC	6 cut(s)	3, 112, 118, 450, 826, 1399
Sau96I	GGNCC	4 cut(s)	377, 416, 1220, 2137
SchI	GAGTC	4 cut(s)	524, 665, 1730, 2554
ScrFI	CCNGG	2 cut(s)	1206, 2095
SduI	GDGCHC	2 cut(s)	131, 2013
SfaNI	GCATC	8 cut(s)	541, 665, 729, 1067, 1126, 1669, 1853, 1917
SfcI	CTRYAG	3 cut(s)	420, 1064, 2381
Sfr274I	CTCGAG	1 cut(s)	1814
SfuI	TTCGAA	4 cut(s)	494, 503, 510, 2231
SgrAI	CRCCGGYG	1 cut(s)	844
SinI	GGWCC	2 cut(s)	377, 1220
SlaI	CTCGAG	1 cut(s)	1814
SmiMI	CAYNNNNRTG	1 cut(s)	1374
SmlI	CTYRAG	4 cut(s)	791, 1593, 1814, 2169
SmoI	CTYRAG	4 cut(s)	791, 1593, 1814, 2169
SnaBI	TACGTA	1 cut(s)	1831
SsiI	CCGC	9 cut(s)	170, 173, 572, 842, 950, 1069, 1391, 1857, 2424
SspI	AATATT	1 cut(s)	2115
SspMI	CTAG	4 cut(s)	965, 1479, 1494, 2623
SstI	GAGCTC	1 cut(s)	2013
StyD4I	CCNGG	2 cut(s)	1204, 2093
StyI	CCWWGG	2 cut(s)	39, 2209
TaaI	ACNGT	7 cut(s)	1091, 1411, 1760, 1874, 1967, 2050, 2515
TaiI	ACGT	3 cut(s)	705, 1034, 1833
TaqII	GACCGA	1 cut(s)	2234
TauI	GCSGC	4 cut(s)	172, 175, 1859, 2426
TfiI	GAWTC	8 cut(s)	66, 315, 385, 391, 752, 872, 1046, 2188
Tru1I	TTAA	6 cut(s)	792, 987, 1271, 1524, 1611, 1994
Tru9I	TTAA	6 cut(s)	792, 987, 1271, 1524, 1611, 1994
TscAI	CASTG	5 cut(s)	594, 1030, 1575, 1879, 2059
TseFI	GTSAC	4 cut(s)	617, 1091, 1936, 2050
Tsp45I	GTSAC	4 cut(s)	617, 1091, 1936, 2050
TspGWI	ACGGA	2 cut(s)	732, 1423
TspRI	CASTG	5 cut(s)	594, 1030, 1575, 1879, 2059
Van91I	CCANNNNNTGG	1 cut(s)	1574
Vha464I	CTTAAG	1 cut(s)	791
VpaK11BI	GGWCC	2 cut(s)	377, 1220
XapI	RAATTY	7 cut(s)	253, 490, 505, 821, 1309, 2083, 2347
XceI	RCATGY	3 cut(s)	1787, 2079, 2368
XhoI	CTCGAG	1 cut(s)	1814
XmnI	GAANNNNTTC	2 cut(s)	2366, 2545
XspI	CTAG	4 cut(s)	965, 1479, 1494, 2623
Zsp2I	ATGCAT	1 cut(s)	1377

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.