Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001577.1

Orthogroup ID

OG0008448

Physical Location & Seq

Genomic Coordinates Reverse (-)

76071 .. 79325

Gene Structure 3255 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001577.1_g000015.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2655 bp

atggcagctgctgcaactgatggactttccggccgcagtgagatagtgagtaacaagcgtaggagaggagaggagagcccgggaagcatggatgaggaagattgcaaggtggaggtggaagacaatatggtgctttctcagatgtcgtcatcatcatcggctcgccggagaaaccatatggtggtgaaagtctcgaagcaagatcagccgttgaagttgatcggcgttcaagttccgaggaaggctcgttcagcttcaggaaaacggtcgcgtgaaaatagttcttcaggaaatgatggggttgggaaaggtcagaatctgaagaaactgagcgtagaaccgaggaagaagatgaaaccacctggagtcaagaatcgacctccaaaatcgttgaaatcgtcttctaggactgtagaggaggaaattgagattgagatcgccgaagttcttttcgggttgatgaagcaatctcagagctctagggatagtgatagtgttgaaagctctccgtcaaaccgggaagataaagatagatatggcattagaaacgattctaagacttcaatctcggaacaggaaaacagccatgtctctgatcccgagctcaaaaatgtctccaaggagaacaattctaatgcagaagcagttgaagtagaaagtgaccagaagccaaacatggaaacttctttgccgaattgggagccaaaatctgaagatgtatccgggtcagtagagttgcagaaggaggaagccaagccattagaggtaccggagcttaaaagcaagagagaggacaagtttgaatttgatctcatggctcctcctcctatggaggattcagcatctgataaacttgtggcggaagctgtgcttgaaacactgcaagacaagaagatagaggtaatcacggaaaagataaatgagaatccaaaccgagatagtggcactaaattacaacagcaacctaagactatcattcctaaactggagagaactgactggcgaagcggtctttcagccaccacattacagcccgggaattcatctctgtctcaatcatgtgctaagactagatgtgcaactcaccattacatcgctcgcaacatatacttgcaccagaaggttacaaatatgaacaatctctggccagcagcaggtggttctgctcctctatgtggcaccaagccagacatagttgttggaaacccaagtctaggaagcgtctcagttcagagtgcaaaagaatcaaaagatcaaatttctaaggctgcattcatagaatcaacaagaagcaagaagcttgtggctcaacaatctccatcacagccggcctctgctggtaatctaatgcatggacctactttcaaattctctgtgggacaaaatcaagcaacagttgcagcaaccagtaatccatctggtcctttgaaatatacagaattgacaaacaatgcatcacatttcagtcattcagcattgtcaacagtagctgcagcaaacctcagtagcccgaatatgacattccaagaaggtccgtacttagcaattaatgggtactcattccccatttcaactccttcaggaagaacactggcatttcaaggaggaaactctactcaggcagtgccttcatataatggtcctttctattcaaatcaaatgtttcacccttcacagcttcatcagcaacagtctcactcacagttgcagcatcaagtccgatcaatccatcaaaagaacactggaatttcaaccgattcatcgttgtttcacaggcaactagagtctcagcaaccgcagaaaacacaatttagcagtatgcaatcacagcagtcacaaaagcagtatatgccacaatcccttcagccttgcaagcctgagggtgacatcaatggggggaatactgcatcttctcaggcgcaacgtagtgtttatggttatgggcagaattttgcagtgccacttcaacccatgaactttaccatgatgccctatgtaacattgagtggtggtggcagtggaaatcacattgagcaatcacaacaacaggacttaaagggtgtctttggcatgtcatttgcctccatcagtggaaataagggtacaggtaaactcctgaacttttcatccatgtcacaaaatccagcaatgtatcaaacccttccagcaacccaaggtgcacaccaaaactatcatcaccatgtatccgaaaggaagactggaagcgtttccgacaatcctgatcatgatgggtcaaaagctgttactgggaggtcaacagtgcagacccttgtttttgataattcagcaacaaatctcaacttcacaacctcgaattctcatcaacagcacctctaccagtttcagcttcagcagcagcaacctgctatggcagctaagagtaaagcaccaaagagcgctcctgtcttctcacaagctctagtacagtgcaattcttctgtccaatctcctaacaactccggaagatcattgacttcccaaattccgattacaacttcagcagtcaatagttttcttcaacaacaaggaagagcttcacaaggtcagactcttctatcttttggaggaagccctaaatcgtccttagcagtaccacaaggtcaagtcactaaccctagtttgctgacgacttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

884

Amino Acids

95.94

Weight (kDa)

9.07

Isoelectric Point (pI)

62.59

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008448)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G63180 AT3G63180
fragaria_vesca	FvH4_2g23490 FvH4_2g23490
malus_domestica	MD03G1263800.v1.1 MD11G1284500.v1.1
prunus_persica	Prupe.8G240200_v2.0.a1 Prupe.8G240200_v2.0.a1 Prupe.8G240200_v2.0.a1
pyrus_communis	pycom03g21150 pycom11g25200
rosa_chinensis	RchiOBHm_Chr6g0290961
rosa_laevigata	RLG00000012160
rosa_multiflora	Rmu_sc0001577.1_g000015
rosa_roxburghii	Rroxscaffold_7G00176510
rosa_rugosa	Rorug06G0216500 Rorug06G0216600 Rorug06G0216700
rosa_samantha	Rh6AG326400 Rh6BG334000 Rh6CG340100 Rh6DG327300
rosa_wichuraiana	Rw6G028380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1145
Acc36I	ACCTGC	2 cut(s)	1145, 2392
Acc65I	GGTACC	1 cut(s)	766
AccB1I	GGYRCC	2 cut(s)	766, 1178
AccB7I	CCANNNNNTGG	1 cut(s)	181
AccII	CGCG	1 cut(s)	271
AccIII	TCCGGA	1 cut(s)	2480
AciI	CCGC	4 cut(s)	34, 860, 1008, 1796
AclWI	GGATC	1 cut(s)	590
AcoI	YGGCCR	2 cut(s)	31, 1145
AcsI	RAATTY	8 cut(s)	803, 1039, 1257, 1367, 1746, 1948, 2335, 2502
AcuI	CTGAAG	8 cut(s)	240, 270, 341, 732, 1563, 1847, 2354, 2502
AfaI	GTAC	6 cut(s)	768, 1538, 1556, 2104, 2445, 2613
AfeI	AGCGCT	1 cut(s)	2419
AfiI	CCNNNNNNNGG	4 cut(s)	181, 1154, 1175, 1214
AjnI	CCWGG	1 cut(s)	361
AloI	GAACNNNNNNTCC	4 cut(s)	232, 264, 2111, 2143
Alw21I	GWGCWC	3 cut(s)	479, 606, 2182
Alw26I	GTCTC	7 cut(s)	196, 595, 619, 1056, 1228, 1698, 1791
Alw44I	GTGCAC	1 cut(s)	2178
AlwI	GGATC	1 cut(s)	590
AlwNI	CAGNNNCTG	4 cut(s)	11, 319, 845, 1490
Ama87I	CYCGRG	3 cut(s)	79, 599, 1034
Aor13HI	TCCGGA	1 cut(s)	2480
Aor51HI	AGCGCT	1 cut(s)	2419
AoxI	GGCC	3 cut(s)	31, 1145, 1329
ApaLI	GTGCAC	1 cut(s)	2178
ApoI	RAATTY	8 cut(s)	803, 1039, 1257, 1367, 1746, 1948, 2335, 2502
AseI	ATTAAT	1 cut(s)	1548
Asp700I	GAANNNNTTC	3 cut(s)	550, 2227, 2554
Asp718I	GGTACC	1 cut(s)	766
AspLEI	GCGC	2 cut(s)	1921, 2420
AspS9I	GGNCC	4 cut(s)	1355, 1421, 1532, 1640
AsuC2I	CCSGG	6 cut(s)	80, 81, 518, 724, 1035, 1036
AsuHPI	GGTGA	5 cut(s)	196, 1076, 1658, 1895, 2189
AvaI	CYCGRG	3 cut(s)	79, 599, 1034
AvaII	GGWCC	4 cut(s)	1355, 1421, 1532, 1640
AxyI	CCTNAGG	1 cut(s)	1878
BaeGI	GKGCMC	1 cut(s)	2182
BalI	TGGCCA	1 cut(s)	1147
BanI	GGYRCC	2 cut(s)	766, 1178
BanII	GRGCYC	3 cut(s)	80, 479, 606
BbsI	GAAGAC	4 cut(s)	126, 393, 2222, 2419
Bbv12I	GWGCWC	3 cut(s)	479, 606, 2182
BccI	CCATC	7 cut(s)	14, 290, 1327, 1423, 1737, 2093, 2243
BceAI	ACGGC	1 cut(s)	193
BciT130I	CCWGG	1 cut(s)	363
BciVI	GTATCC	2 cut(s)	730, 2215
BclI	TGATCA	1 cut(s)	2242
BcnI	CCSGG	6 cut(s)	80, 81, 518, 724, 1035, 1036
BcoDI	GTCTC	7 cut(s)	196, 595, 619, 1056, 1228, 1698, 1791
BfaI	CTAG	7 cut(s)	405, 480, 1071, 1214, 1781, 2441, 2637
BfmI	CTRYAG	2 cut(s)	411, 1491
BfoI	RGCGCY	1 cut(s)	2421
BfuAI	ACCTGC	2 cut(s)	1145, 2392
BfuI	GTATCC	2 cut(s)	730, 2215
Bme1390I	CCNGG	7 cut(s)	80, 81, 363, 518, 724, 1035, 1036
Bme18I	GGWCC	4 cut(s)	1355, 1421, 1532, 1640
BmeT110I	CYCGRG	3 cut(s)	79, 599, 1034
BmgT120I	GGNCC	4 cut(s)	1355, 1421, 1532, 1640
BmiI	GGNNCC	4 cut(s)	702, 768, 819, 1180
BmrFI	CCNGG	7 cut(s)	80, 81, 363, 518, 724, 1035, 1036
BmrI	ACTGGG	1 cut(s)	2277
BmsI	GCATC	5 cut(s)	851, 1463, 1720, 1916, 1977
BmuI	ACTGGG	1 cut(s)	2277
BpiI	GAAGAC	4 cut(s)	126, 393, 2222, 2419
BplI	GAGNNNNNCTC	2 cut(s)	229, 261
BpmI	CTGGAG	2 cut(s)	384, 1007
Bpu10I	CCTNAGC	1 cut(s)	2605
BpuMI	CCSGG	6 cut(s)	80, 81, 518, 724, 1035, 1036
BsaBI	GATNNNNATC	1 cut(s)	434
BsaJI	CCNNGG	6 cut(s)	79, 236, 341, 618, 1034, 2173
BsaWI	WCCGGW	2 cut(s)	769, 2480
Bsc4I	CCNNNNNNNGG	4 cut(s)	181, 1154, 1175, 1214
Bse118I	RCCGGY	1 cut(s)	1327
Bse1I	ACTGG	8 cut(s)	990, 1004, 1407, 1596, 1747, 2224, 2272, 2359
Bse21I	CCTNAGG	1 cut(s)	1878
Bse3DI	GCAATG	1 cut(s)	2154
Bse8I	GATNNNNATC	1 cut(s)	434
BseAI	TCCGGA	1 cut(s)	2480
BseBI	CCWGG	1 cut(s)	363
BseDI	CCNNGG	6 cut(s)	79, 236, 341, 618, 1034, 2173
BseGI	GGATG	2 cut(s)	97, 2126
BseJI	GATNNNNATC	1 cut(s)	434
BseLI	CCNNNNNNNGG	4 cut(s)	181, 1154, 1175, 1214
BseMI	GCAATG	1 cut(s)	2154
BseMII	CTCAG	9 cut(s)	152, 320, 485, 1239, 1516, 1631, 1802, 1869, 1928
BseNI	ACTGG	8 cut(s)	990, 1004, 1407, 1596, 1747, 2224, 2272, 2359
BseRI	GAGGAG	6 cut(s)	81, 86, 431, 810, 813, 1158
BseSI	GKGCMC	1 cut(s)	2182
BseX3I	CGGCCG	1 cut(s)	31
BsgI	GTGCAG	1 cut(s)	2303
Bsh1236I	CGCG	1 cut(s)	271
Bsh1285I	CGRYCG	2 cut(s)	34, 269
BshFI	GGCC	3 cut(s)	33, 1147, 1331
BshNI	GGYRCC	2 cut(s)	766, 1178
BsiEI	CGRYCG	2 cut(s)	34, 269
BsiHKAI	GWGCWC	3 cut(s)	479, 606, 2182
BsiHKCI	CYCGRG	3 cut(s)	79, 599, 1034
BsiSI	CCGG	9 cut(s)	30, 80, 166, 517, 723, 770, 1035, 1328, 2481
BslFI	GGGAC	1 cut(s)	1392
BslI	CCNNNNNNNGG	4 cut(s)	181, 1154, 1175, 1214
BsmAI	GTCTC	7 cut(s)	196, 595, 619, 1056, 1228, 1698, 1791
BsmBI	CGTCTC	1 cut(s)	1228
BsmFI	GGGAC	1 cut(s)	1392
BsmI	GAATGC	1 cut(s)	1271
BsnI	GGCC	3 cut(s)	33, 1147, 1331
BsoBI	CYCGRG	3 cut(s)	79, 599, 1034
Bsp1286I	GDGCHC	4 cut(s)	80, 479, 606, 2182
Bsp13I	TCCGGA	1 cut(s)	2480
Bsp143I	GATC	9 cut(s)	202, 219, 435, 595, 808, 1252, 1721, 2242, 2486
BspACI	CCGC	4 cut(s)	34, 860, 1008, 1796
BspANI	GGCC	3 cut(s)	33, 1147, 1331
BspCNI	CTCAG	9 cut(s)	151, 321, 484, 1238, 1515, 1630, 1801, 1870, 1927
BspEI	TCCGGA	1 cut(s)	2480
BspFNI	CGCG	1 cut(s)	271
BspHI	TCATGA	1 cut(s)	2245
BspLI	GGNNCC	4 cut(s)	702, 768, 819, 1180
BspMAI	CTGCAG	1 cut(s)	1495
BspMI	ACCTGC	2 cut(s)	1145, 2392
BspPI	GGATC	1 cut(s)	590
BspQI	GCTCTTC	1 cut(s)	2545
BspT107I	GGYRCC	2 cut(s)	766, 1178
BsrDI	GCAATG	1 cut(s)	2154
BsrFI	RCCGGY	1 cut(s)	1327
BsrI	ACTGG	8 cut(s)	990, 1004, 1407, 1596, 1747, 2224, 2272, 2359
BssAI	RCCGGY	1 cut(s)	1327
BssECI	CCNNGG	6 cut(s)	79, 236, 341, 618, 1034, 2173
BssMI	GATC	9 cut(s)	202, 219, 435, 595, 808, 1252, 1721, 2242, 2486
BssT1I	CCWWGG	2 cut(s)	618, 2173
Bst2UI	CCWGG	1 cut(s)	363
Bst4CI	ACNGT	8 cut(s)	267, 412, 1396, 1486, 1692, 1704, 2281, 2448
Bst6I	CTCTTC	2 cut(s)	2545, 2577
BstAPI	GCANNNNNTGC	3 cut(s)	11, 1397, 1849
BstC8I	GCNNGC	5 cut(s)	163, 1099, 1149, 1329, 1874
BstF5I	GGATG	2 cut(s)	97, 2126
BstFNI	CGCG	1 cut(s)	271
BstH2I	RGCGCY	1 cut(s)	2421
BstHHI	GCGC	2 cut(s)	1921, 2420
BstKTI	GATC	9 cut(s)	205, 222, 438, 598, 811, 1255, 1724, 2245, 2489
BstMAI	GTCTC	7 cut(s)	196, 595, 619, 1056, 1228, 1698, 1791
BstMBI	GATC	9 cut(s)	202, 219, 435, 595, 808, 1252, 1721, 2242, 2486
BstMCI	CGRYCG	2 cut(s)	34, 269
BstNI	CCWGG	1 cut(s)	363
BstNSI	RCATGY	1 cut(s)	2074
BstSCI	CCNGG	7 cut(s)	78, 79, 361, 516, 722, 1033, 1034
BstSFI	CTRYAG	2 cut(s)	411, 1491
BstSLI	GKGCMC	1 cut(s)	2182
BstUI	CGCG	1 cut(s)	271
BstV2I	GAAGAC	4 cut(s)	126, 393, 2222, 2419
BstZI	CGGCCG	1 cut(s)	31
Bsu36I	CCTNAGG	1 cut(s)	1878
BsuI	GTATCC	2 cut(s)	730, 2215
BsuRI	GGCC	3 cut(s)	33, 1147, 1331
BtgZI	GCGATG	1 cut(s)	1078
BtsCI	GGATG	2 cut(s)	97, 2126
BtsI	GCAGTG	5 cut(s)	43, 878, 1629, 1962, 2023
BveI	ACCTGC	2 cut(s)	1145, 2392
Cac8I	GCNNGC	5 cut(s)	163, 1099, 1149, 1329, 1874
CaiI	CAGNNNCTG	4 cut(s)	11, 319, 845, 1490
CciI	TCATGA	1 cut(s)	2245
CfoI	GCGC	2 cut(s)	1921, 2420
Cfr10I	RCCGGY	1 cut(s)	1327
Cfr13I	GGNCC	4 cut(s)	1355, 1421, 1532, 1640
Cfr9I	CCCGGG	2 cut(s)	79, 1034
CseI	GACGC	1 cut(s)	1210
Csp6I	GTAC	6 cut(s)	767, 1537, 1555, 2103, 2444, 2612
CviQI	GTAC	6 cut(s)	767, 1537, 1555, 2103, 2444, 2612
DpnI	GATC	9 cut(s)	204, 221, 437, 597, 810, 1254, 1723, 2244, 2488
DpnII	GATC	9 cut(s)	202, 219, 435, 595, 808, 1252, 1721, 2242, 2486
EaeI	YGGCCR	2 cut(s)	31, 1145
EagI	CGGCCG	1 cut(s)	31
Eam1104I	CTCTTC	2 cut(s)	2545, 2577
EarI	CTCTTC	2 cut(s)	2545, 2577
EciI	GGCGGA	1 cut(s)	875
Ecl136II	GAGCTC	2 cut(s)	477, 604
EclXI	CGGCCG	1 cut(s)	31
Eco130I	CCWWGG	2 cut(s)	618, 2173
Eco24I	GRGCYC	3 cut(s)	80, 479, 606
Eco47I	GGWCC	4 cut(s)	1355, 1421, 1532, 1640
Eco47III	AGCGCT	1 cut(s)	2419
Eco52I	CGGCCG	1 cut(s)	31
Eco53kI	GAGCTC	2 cut(s)	477, 604
Eco57I	CTGAAG	8 cut(s)	240, 270, 341, 732, 1563, 1847, 2354, 2502
Eco81I	CCTNAGG	1 cut(s)	1878
Eco88I	CYCGRG	3 cut(s)	79, 599, 1034
EcoICRI	GAGCTC	2 cut(s)	477, 604
EcoRI	GAATTC	2 cut(s)	1039, 2335
EcoRII	CCWGG	1 cut(s)	361
EcoT14I	CCWWGG	2 cut(s)	618, 2173
EcoT22I	ATGCAT	2 cut(s)	1353, 1456
EcoT38I	GRGCYC	3 cut(s)	80, 479, 606
ErhI	CCWWGG	2 cut(s)	618, 2173
Esp3I	CGTCTC	1 cut(s)	1228
FalI	AAGNNNNNCTT	4 cut(s)	855, 887, 2048, 2080
FaqI	GGGAC	1 cut(s)	1392
FauNDI	CATATG	1 cut(s)	177
FbaI	TGATCA	1 cut(s)	2242
FokI	GGATG	2 cut(s)	104, 2113
FriOI	GRGCYC	3 cut(s)	80, 479, 606
FspBI	CTAG	7 cut(s)	405, 480, 1071, 1214, 1781, 2441, 2637
GlaI	GCGC	2 cut(s)	1920, 2419
GsuI	CTGGAG	2 cut(s)	384, 1007
HaeII	RGCGCY	1 cut(s)	2421
HaeIII	GGCC	3 cut(s)	33, 1147, 1331
HapII	CCGG	9 cut(s)	30, 80, 166, 517, 723, 770, 1035, 1328, 2481
HgaI	GACGC	1 cut(s)	1210
HhaI	GCGC	2 cut(s)	1921, 2420
Hin6I	GCGC	2 cut(s)	1919, 2418
HinP1I	GCGC	2 cut(s)	1919, 2418
HincII	GTYRAC	2 cut(s)	1482, 2277
HindII	GTYRAC	2 cut(s)	1482, 2277
HindIII	AAGCTT	1 cut(s)	1298
HpaII	CCGG	9 cut(s)	30, 80, 166, 517, 723, 770, 1035, 1328, 2481
HphI	GGTGA	5 cut(s)	196, 1076, 1658, 1895, 2189
Hpy166II	GTNNAC	4 cut(s)	1482, 2111, 2180, 2277
Hpy8I	GTNNAC	4 cut(s)	1482, 2111, 2180, 2277
HpyAV	CCTTC	9 cut(s)	235, 736, 1114, 1523, 1587, 1638, 1680, 1871, 2171
HpyCH4III	ACNGT	8 cut(s)	267, 412, 1396, 1486, 1692, 1704, 2281, 2448
HpyCH4IV	ACGT	1 cut(s)	1924
HpySE526I	ACGT	1 cut(s)	1924
HspAI	GCGC	2 cut(s)	1919, 2418
Kpn2I	TCCGGA	1 cut(s)	2480
KpnI	GGTACC	1 cut(s)	770
KroI	GCCGGC	1 cut(s)	1327
KroNI	GCCGGC	1 cut(s)	1329
Ksp22I	TGATCA	1 cut(s)	2242
Kzo9I	GATC	9 cut(s)	202, 219, 435, 595, 808, 1252, 1721, 2242, 2486
LguI	GCTCTTC	1 cut(s)	2545
LmnI	GCTCC	5 cut(s)	700, 772, 823, 1171, 2425
LweI	GCATC	5 cut(s)	851, 1463, 1720, 1916, 1977
MaeI	CTAG	7 cut(s)	405, 480, 1071, 1214, 1781, 2441, 2637
MaeII	ACGT	1 cut(s)	1924
MaeIII	GTNAC	9 cut(s)	50, 659, 1123, 1833, 1883, 1996, 2133, 2263, 2626
MalI	GATC	9 cut(s)	204, 221, 437, 597, 810, 1254, 1723, 2244, 2488
MboI	GATC	9 cut(s)	202, 219, 435, 595, 808, 1252, 1721, 2242, 2486
MhlI	GDGCHC	4 cut(s)	80, 479, 606, 2182
MlsI	TGGCCA	1 cut(s)	1147
MluNI	TGGCCA	1 cut(s)	1147
MlyI	GAGTC	3 cut(s)	375, 1793, 2563
MmeI	TCCRAC	2 cut(s)	1180, 2256
Mox20I	TGGCCA	1 cut(s)	1147
Mph1103I	ATGCAT	2 cut(s)	1353, 1456
MroI	TCCGGA	1 cut(s)	2480
MroNI	GCCGGC	1 cut(s)	1327
MroXI	GAANNNNTTC	3 cut(s)	550, 2227, 2554
MscI	TGGCCA	1 cut(s)	1147
MseI	TTAA	3 cut(s)	777, 1548, 2054
MslI	CAYNNNNRTG	1 cut(s)	2199
Msp20I	TGGCCA	1 cut(s)	1147
MspA1I	CMGCKG	1 cut(s)	8
MspI	CCGG	9 cut(s)	30, 80, 166, 517, 723, 770, 1035, 1328, 2481
MspR9I	CCNGG	7 cut(s)	80, 81, 363, 518, 724, 1035, 1036
Mva1269I	GAATGC	1 cut(s)	1271
MvaI	CCWGG	1 cut(s)	363
MvnI	CGCG	1 cut(s)	271
NaeI	GCCGGC	1 cut(s)	1329
NciI	CCSGG	6 cut(s)	80, 81, 518, 724, 1035, 1036
NdeI	CATATG	1 cut(s)	177
NdeII	GATC	9 cut(s)	202, 219, 435, 595, 808, 1252, 1721, 2242, 2486
NgoMIV	GCCGGC	1 cut(s)	1327
NlaIV	GGNNCC	4 cut(s)	702, 768, 819, 1180
NmuCI	GTSAC	5 cut(s)	659, 1833, 1883, 2133, 2626
NsiI	ATGCAT	2 cut(s)	1353, 1456
NspI	RCATGY	1 cut(s)	2074
PagI	TCATGA	1 cut(s)	2245
PaqCI	CACCTGC	1 cut(s)	1145
PciSI	GCTCTTC	1 cut(s)	2545
PcsI	WCGNNNNNNNCGW	1 cut(s)	395
PctI	GAATGC	1 cut(s)	1271
PdiI	GCCGGC	1 cut(s)	1329
PdmI	GAANNNNTTC	3 cut(s)	550, 2227, 2554
PfeI	GAWTC	8 cut(s)	316, 373, 551, 836, 925, 1244, 1280, 1757
PflMI	CCANNNNNTGG	1 cut(s)	181
PleI	GAGTC	3 cut(s)	374, 1792, 2563
PpsI	GAGTC	3 cut(s)	374, 1792, 2563
PshBI	ATTAAT	1 cut(s)	1548
Psp124BI	GAGCTC	2 cut(s)	479, 606
Psp6I	CCWGG	1 cut(s)	361
PspGI	CCWGG	1 cut(s)	361
PspN4I	GGNNCC	4 cut(s)	702, 768, 819, 1180
PspPI	GGNCC	4 cut(s)	1355, 1421, 1532, 1640
PstI	CTGCAG	1 cut(s)	1495
PstNI	CAGNNNCTG	4 cut(s)	11, 319, 845, 1490
PvuII	CAGCTG	1 cut(s)	8
RsaI	GTAC	6 cut(s)	768, 1538, 1556, 2104, 2445, 2613
RsaNI	GTAC	6 cut(s)	767, 1537, 1555, 2103, 2444, 2612
RseI	CAYNNNNRTG	1 cut(s)	2199
SacI	GAGCTC	2 cut(s)	479, 606
SapI	GCTCTTC	1 cut(s)	2545
SaqAI	TTAA	3 cut(s)	777, 1548, 2054
Sau3AI	GATC	9 cut(s)	202, 219, 435, 595, 808, 1252, 1721, 2242, 2486
Sau96I	GGNCC	4 cut(s)	1355, 1421, 1532, 1640
SchI	GAGTC	3 cut(s)	375, 1793, 2563
ScrFI	CCNGG	7 cut(s)	80, 81, 363, 518, 724, 1035, 1036
SduI	GDGCHC	4 cut(s)	80, 479, 606, 2182
SfaNI	GCATC	5 cut(s)	851, 1463, 1720, 1916, 1977
SfcI	CTRYAG	2 cut(s)	411, 1491
SinI	GGWCC	4 cut(s)	1355, 1421, 1532, 1640
SmaI	CCCGGG	2 cut(s)	81, 1036
SmiMI	CAYNNNNRTG	1 cut(s)	2199
SsiI	CCGC	4 cut(s)	34, 860, 1008, 1796
SspMI	CTAG	7 cut(s)	405, 480, 1071, 1214, 1781, 2441, 2637
SstI	GAGCTC	2 cut(s)	479, 606
StyD4I	CCNGG	7 cut(s)	78, 79, 361, 516, 722, 1033, 1034
StyI	CCWWGG	2 cut(s)	618, 2173
TaaI	ACNGT	8 cut(s)	267, 412, 1396, 1486, 1692, 1704, 2281, 2448
TaiI	ACGT	1 cut(s)	1927
TaqI	TCGA	3 cut(s)	194, 376, 2333
TatI	WGTACW	1 cut(s)	2443
TauI	GCSGC	1 cut(s)	36
TfiI	GAWTC	8 cut(s)	316, 373, 551, 836, 925, 1244, 1280, 1757
Tru1I	TTAA	3 cut(s)	777, 1548, 2054
Tru9I	TTAA	3 cut(s)	777, 1548, 2054
TseFI	GTSAC	5 cut(s)	659, 1833, 1883, 2133, 2626
Tsp45I	GTSAC	5 cut(s)	659, 1833, 1883, 2133, 2626
TspGWI	ACGGA	3 cut(s)	498, 923, 1524
TspMI	CCCGGG	2 cut(s)	79, 1034
Van91I	CCANNNNNTGG	1 cut(s)	181
VneI	GTGCAC	1 cut(s)	2178
VpaK11BI	GGWCC	4 cut(s)	1355, 1421, 1532, 1640
VspI	ATTAAT	1 cut(s)	1548
XapI	RAATTY	8 cut(s)	803, 1039, 1257, 1367, 1746, 1948, 2335, 2502
XceI	RCATGY	1 cut(s)	2074
XmaI	CCCGGG	2 cut(s)	79, 1034
XmnI	GAANNNNTTC	3 cut(s)	550, 2227, 2554
XspI	CTAG	7 cut(s)	405, 480, 1071, 1214, 1781, 2441, 2637
Zsp2I	ATGCAT	2 cut(s)	1353, 1456

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.