Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0008448

Physical Location & Seq

Genomic Coordinates Reverse (-)

21453261 .. 21456725

Gene Structure 3465 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g21150.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2607 bp

ATGATCATGGAGAGAAGCAGAGAAACAAGAAGGCCAAATATGGCAGCAAGCAAAAAACAGAAGAGAATCGTGAGAGAGCAGAGCCAAAAACAGAGGAGGTACAGAGGAGGAGATCAAGATCAAGAGAGCACAGAAGAGAGCTTGGGTTTTTCCGACCACCAAGCTCCGCCGCCGCTAAAAGCTGCCCGTGAAATGATCGGAGTTTCAGTTCCCAGAAAAGCTCGCTCAGCTGCTGGAAAGAGGTCGCATGAAAATTTCTCTTCTGGGAGTCATGGAGGAGTTGGGGAGGAAGAACGGAGTCTTCAGCAGCTGAGATTCAAAGCTGCTTCGCTTTCTTTCTCAAATGTTTCATCGAGGAAGACGATGAAACCAAATGGACCCAAGATTCGGATTCCAAACCTGTCGAAATCTTCAGGGCCTGTAGAAGAGGAAGACGCCATTGAGATTGAGATCGCTGAGGTTCTCTATGGCCTTATGAAGCAAACCCAGAATTCGAAAACACGTAGAAATGACTCCGAGGAGAAGAAACCGGATGCTGAAAGTGCTTCAATGGCGGTTCAAAGCAGCTCAGTGGCTGAAGCAATTGAAGTTGAAGAAAGTGACCGGCCGGAAAAGATTGAAGCTTGCTCTGAAGGTGCATCAGGGTCGATGGACTCGCACGAGGAGAAAGCCGGAAATCCATACGTGGAAGAAAAGAGCACCATCGCCACAAAAGCCGAGTTTCCGTGGGAAGATTCGACGGGGACAAACGCGATTTCAACTGGGTTGGAGCTTAAGAGGAAGGGAGAGGAGGAAAGGTTTGAATTTGATCTGATGGCTCCTCCGCCTGTGGAGCAGGATGACGACTTGACAGATTCTCCACCCCCTACCCAAGATTTAGATATGAAGATTGAAGTTATGGTCAAGAACGAAGAGAAAGGGGAAACATTTGCGGAGGCAGTTGTGCTAGAAAAATCGCAACAGAAGCTTAAAGACAATCCAAATCAAGATAGTACCAGTAAATCCACTGCGACGTTGCAGCCTTCCGATTCCCAACAGTTTCAGCTGCGGCGGAAGAGATGCGCAACCCACCGTCACATTGCTCACAACATTTACTTGCATCAGAAGGTTGCGAAGACAAACGATTTCTGGCCTGCAGCAACTGGTTCTGTTCCTCTTTGTGGCACCAAGCCAGACATCCCATTGCTGGGAAGCTTATCAGGTCCAAATCTTCAGCATTCGCAGAAAAAGGAGCAGGCTGCGTCGAAGTTTTCAAGTCATAGTGGAAGGGAAAGAAGTTCTGAGGCTACGAATTTCGTAGAGACATCACATAAAATGCAACTTTCAGTTCAGCCAACCTATGCTGGTGGTCAAATGCATGGACATACTTTCGCGGTTGAGGATCAAACAACAGTTACACCAACCAGTAATCAATCCGTCCCGTTGAAATATGCGCAATCAACAAACAATGCAGCACTCTCTAGTCATTCATCTGCTAGACCTCTGGAGAGTTCTTTAGTGAACTTTAATGGCTATCAATTCCCCGTTTCAACTCATATAGAAACAACACCAGTGTTTGGAAGAGGAAACCCTGCTCAAGCATTGCCTGTATTTAACACACCTTTCTATTCAAATCAAATGTTCCACCCTTCCTATGTTCAGCAGCAAGTCCAACCATCTCATCAAAACGCAAAGGCTTCATCACCGTCTCACAGGCAACATGAGTCCCATAAACTGAGGGAAGCACAATTTAGTAGCAACAGTTTTTTTACCTCACAAAAGCAGCATGTCTCACCATCGCCTCAACAATGCAAGCTCGAGGGTGAAGTGAACGTAGAGAATGCTGCATCTCCTGCTGCCGCTCATGCTCAGAACAGTGTTTATGGGCAGACCTTTTCGGTTCCATTTCAACCCGTCAACTTTACCTTGATGCCTTTTGTGACAATGGGTGGTGGTGGCAATGGAAACAGTGTTGAGCAATCCCAGCAGCAGGGCTTAAAGGGTGGAGTTGAGCTCATCCCATCTAAGGCATATGGCATATCATTTTCCACCATCACTGGAAACAACGGCTCGGGTACATGCTTGAATTTTTCATCCAGGGAACAAAATCCTGCAATATTTCAAAGCCTCCCAGATATGGCCCAGCACGGGTATAAAATCACACCAGCACGTCAAGCTGCACAGCAAAAGAATCACCACCACCAAGTATCCCAAGGGAAGACCGATGGTGGTTCGAATAACGCTGAAGATGGGTCAAGAGCTGCTTCTGGGAAGTCTTCATCAGGTATTGGGCAGAAGCAGACCCTTGTTTTCGACAATTCATCGAGAGCTCTCAACTTCATGTCATCAAATTCTCAACAGCAGAACATGTTCCAATTTCAGCTGCAGAACCCACATCAGTTGCAAAAGCAGCAACCTGCTGTTGCCGCCAAAGTCCCGAAAAGCCCCCCAGTTTCCTCACAAGCTCTAATACAAAGCAATAGCCATCACCAATCTCCTCAGTTGAAGAACTCAACAGTCATGAGTTTTCCCCTGCAACAAGGAAGAGATACACAAGGTCAGACTCAGATATCGTTCGGGAAACCCGAAATCAGCCTTAGCACCACAAGGGCAACAGAGACCCACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

869

Amino Acids

94.99

Weight (kDa)

8.08

Isoelectric Point (pI)

63.91

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008448)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G63180 AT3G63180
fragaria_vesca	FvH4_2g23490 FvH4_2g23490
malus_domestica	MD03G1263800.v1.1 MD11G1284500.v1.1
prunus_persica	Prupe.8G240200_v2.0.a1 Prupe.8G240200_v2.0.a1 Prupe.8G240200_v2.0.a1
pyrus_communis	pycom03g21150 pycom11g25200
rosa_chinensis	RchiOBHm_Chr6g0290961
rosa_laevigata	RLG00000012160
rosa_multiflora	Rmu_sc0001577.1_g000015
rosa_roxburghii	Rroxscaffold_7G00176510
rosa_rugosa	Rorug06G0216500 Rorug06G0216600 Rorug06G0216700
rosa_samantha	Rh6AG326400 Rh6BG334000 Rh6CG340100 Rh6DG327300
rosa_wichuraiana	Rw6G028380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	1063, 1434
Acc36I	ACCTGC	1 cut(s)	2404
AccB1I	GGYRCC	1 cut(s)	1163
AccB7I	CCANNNNNTGG	1 cut(s)	1556
AccBSI	CCGCTC	1 cut(s)	1841
AccII	CGCG	2 cut(s)	752, 1373
AclWI	GGATC	1 cut(s)	1389
AcoI	YGGCCR	1 cut(s)	605
AcsI	RAATTY	6 cut(s)	253, 490, 803, 1291, 2065, 2329
AcuI	CTGAAG	6 cut(s)	287, 396, 597, 651, 1196, 2244
AcyI	GRCGYC	1 cut(s)	435
AfaI	GTAC	3 cut(s)	101, 994, 2056
AfiI	CCNNNNNNNGG	9 cut(s)	387, 1160, 1186, 1187, 1556, 1969, 2005, 2116, 2127
AflII	CTTAAG	1 cut(s)	773
AflIII	ACRYGT	2 cut(s)	500, 2346
AjiI	CACGTC	1 cut(s)	2150
AjnI	CCWGG	1 cut(s)	2075
AloI	GAACNNNNNNTCC	2 cut(s)	192, 224
Alw21I	GWGCWC	4 cut(s)	131, 701, 1995, 2311
Alw26I	GTCTC	4 cut(s)	1295, 1692, 1774, 2591
AlwI	GGATC	1 cut(s)	1389
AlwNI	CAGNNNCTG	5 cut(s)	233, 310, 419, 575, 1142
Ama87I	CYCGRG	2 cut(s)	1796, 2050
AoxI	GGCC	6 cut(s)	32, 416, 469, 605, 1130, 2118
ApoI	RAATTY	6 cut(s)	253, 490, 803, 1291, 2065, 2329
ArsI	GACNNNNNNTTYG	2 cut(s)	369, 401
Asp700I	GAANNNNTTC	1 cut(s)	2348
AspLEI	GCGC	2 cut(s)	1064, 1435
AspS9I	GGNCC	4 cut(s)	377, 416, 1202, 2119
AsuHPI	GGTGA	5 cut(s)	1674, 1764, 1814, 2165, 2459
AsuII	TTCGAA	2 cut(s)	494, 2213
AvaI	CYCGRG	2 cut(s)	1796, 2050
AvaII	GGWCC	2 cut(s)	377, 1202
BanI	GGYRCC	1 cut(s)	1163
BanII	GRGCYC	2 cut(s)	1995, 2311
BauI	CACGAG	1 cut(s)	659
BbsI	GAAGAC	6 cut(s)	293, 365, 438, 1121, 2204, 2247
Bbv12I	GWGCWC	4 cut(s)	131, 701, 1995, 2311
BbvCI	CCTCAGC	1 cut(s)	456
BceAI	ACGGC	1 cut(s)	2062
BcgI	CGANNNNNNTGC	2 cut(s)	627, 661
BciT130I	CCWGG	1 cut(s)	2077
BciVI	GTATCC	1 cut(s)	2197
BclI	TGATCA	1 cut(s)	3
BcoDI	GTCTC	4 cut(s)	1295, 1692, 1774, 2591
BfaI	CTAG	3 cut(s)	947, 1461, 1476
BfmI	CTRYAG	3 cut(s)	420, 1134, 2363
BfrI	CTTAAG	1 cut(s)	773
BfuAI	ACCTGC	1 cut(s)	2404
BfuI	GTATCC	1 cut(s)	2197
BlpI	GCTNAGC	1 cut(s)	226
Bme1390I	CCNGG	1 cut(s)	2077
Bme18I	GGWCC	2 cut(s)	377, 1202
BmeT110I	CYCGRG	2 cut(s)	1796, 2050
BmgBI	CACGTC	1 cut(s)	2150
BmgT120I	GGNCC	4 cut(s)	377, 416, 1202, 2119
BmiI	GGNNCC	4 cut(s)	379, 819, 1165, 1881
BmrFI	CCNGG	1 cut(s)	2077
BmrI	ACTGGG	2 cut(s)	771, 2423
BmsI	GCATC	6 cut(s)	523, 647, 1049, 1108, 1835, 1899
BmuI	ACTGGG	2 cut(s)	771, 2423
BpiI	GAAGAC	6 cut(s)	293, 365, 438, 1121, 2204, 2247
BplI	GAGNNNNNCTC	2 cut(s)	1977, 2009
BpmI	CTGGAG	1 cut(s)	1505
Bpu10I	CCTNAGC	2 cut(s)	456, 2576
Bpu1102I	GCTNAGC	1 cut(s)	226
Bpu14I	TTCGAA	2 cut(s)	494, 2213
BpuEI	CTTGAG	1 cut(s)	1560
BsaAI	YACGTR	2 cut(s)	503, 685
BsaBI	GATNNNNATC	2 cut(s)	117, 449
BsaHI	GRCGYC	1 cut(s)	435
BsaI	GGTCTC	1 cut(s)	2591
BsaJI	CCNNGG	4 cut(s)	516, 725, 2076, 2191
BsaWI	WCCGGW	1 cut(s)	529
BsaXI	ACNNNNNCTCC	6 cut(s)	192, 222, 782, 812, 841, 871
Bsc4I	CCNNNNNNNGG	9 cut(s)	387, 1160, 1186, 1187, 1556, 1969, 2005, 2116, 2127
Bse118I	RCCGGY	1 cut(s)	603
Bse1I	ACTGG	7 cut(s)	766, 996, 1147, 1404, 1550, 2041, 2429
Bse3DI	GCAATG	4 cut(s)	1077, 1181, 1580, 1945
Bse8I	GATNNNNATC	2 cut(s)	117, 449
BseBI	CCWGG	1 cut(s)	2077
BseDI	CCNNGG	4 cut(s)	516, 725, 2076, 2191
BseGI	GGATG	5 cut(s)	538, 844, 1176, 1995, 2072
BseJI	GATNNNNATC	2 cut(s)	117, 449
BseLI	CCNNNNNNNGG	9 cut(s)	387, 1160, 1186, 1187, 1556, 1969, 2005, 2116, 2127
BseMI	GCAATG	4 cut(s)	1077, 1181, 1580, 1945
BseMII	CTCAG	9 cut(s)	240, 302, 447, 582, 1272, 1706, 1862, 2492, 2558
BseNI	ACTGG	7 cut(s)	766, 996, 1147, 1404, 1550, 2041, 2429
BseRI	GAGGAG	9 cut(s)	109, 120, 123, 291, 533, 677, 803, 810, 2466
BseX3I	CGGCCG	1 cut(s)	605
BseYI	CCCAGC	3 cut(s)	1186, 1962, 2121
BsgI	GTGCAG	1 cut(s)	2142
Bsh1236I	CGCG	2 cut(s)	752, 1373
Bsh1285I	CGRYCG	1 cut(s)	608
BshFI	GGCC	6 cut(s)	34, 418, 471, 607, 1132, 2120
BshNI	GGYRCC	1 cut(s)	1163
BsiEI	CGRYCG	1 cut(s)	608
BsiHKAI	GWGCWC	4 cut(s)	131, 701, 1995, 2311
BsiHKCI	CYCGRG	2 cut(s)	1796, 2050
BsiSI	CCGG	4 cut(s)	530, 604, 608, 672
BslFI	GGGAC	4 cut(s)	757, 1403, 1690, 2399
BslI	CCNNNNNNNGG	9 cut(s)	387, 1160, 1186, 1187, 1556, 1969, 2005, 2116, 2127
BsmAI	GTCTC	4 cut(s)	1295, 1692, 1774, 2591
BsmBI	CGTCTC	1 cut(s)	1692
BsmFI	GGGAC	4 cut(s)	757, 1403, 1690, 2399
BsmI	GAATGC	2 cut(s)	1216, 1825
BsnI	GGCC	6 cut(s)	34, 418, 471, 607, 1132, 2120
Bso31I	GGTCTC	1 cut(s)	2591
BsoBI	CYCGRG	2 cut(s)	1796, 2050
Bsp119I	TTCGAA	2 cut(s)	494, 2213
Bsp1286I	GDGCHC	4 cut(s)	131, 701, 1995, 2311
Bsp143I	GATC	7 cut(s)	3, 112, 118, 195, 450, 808, 1381
Bsp1720I	GCTNAGC	1 cut(s)	226
BspANI	GGCC	6 cut(s)	34, 418, 471, 607, 1132, 2120
BspCNI	CTCAG	9 cut(s)	239, 303, 448, 581, 1273, 1707, 1861, 2491, 2557
BspFNI	CGCG	2 cut(s)	752, 1373
BspHI	TCATGA	1 cut(s)	2499
BspLI	GGNNCC	4 cut(s)	379, 819, 1165, 1881
BspMAI	CTGCAG	2 cut(s)	1138, 2367
BspMI	ACCTGC	1 cut(s)	2404
BspPI	GGATC	1 cut(s)	1389
BspT104I	TTCGAA	2 cut(s)	494, 2213
BspT107I	GGYRCC	1 cut(s)	1163
BspTI	CTTAAG	1 cut(s)	773
BspTNI	GGTCTC	1 cut(s)	2591
BsrBI	CCGCTC	1 cut(s)	1841
BsrDI	GCAATG	4 cut(s)	1077, 1181, 1580, 1945
BsrFI	RCCGGY	1 cut(s)	603
BsrI	ACTGG	7 cut(s)	766, 996, 1147, 1404, 1550, 2041, 2429
BssAI	RCCGGY	1 cut(s)	603
BssECI	CCNNGG	4 cut(s)	516, 725, 2076, 2191
BssMI	GATC	7 cut(s)	3, 112, 118, 195, 450, 808, 1381
BssNI	GRCGYC	1 cut(s)	435
BssSI	CACGAG	1 cut(s)	659
BssT1I	CCWWGG	1 cut(s)	2191
Bst2BI	CACGAG	1 cut(s)	659
Bst2UI	CCWGG	1 cut(s)	2077
Bst4CI	ACNGT	8 cut(s)	1038, 1073, 1393, 1686, 1742, 1856, 1949, 2497
Bst6I	CTCTTC	8 cut(s)	56, 129, 265, 420, 906, 1049, 1555, 2518
BstACI	GRCGYC	1 cut(s)	435
BstAFI	CTTAAG	1 cut(s)	773
BstAPI	GCANNNNNTGC	1 cut(s)	1832
BstBAI	YACGTR	2 cut(s)	503, 685
BstBI	TTCGAA	2 cut(s)	494, 2213
BstC8I	GCNNGC	6 cut(s)	49, 223, 625, 1134, 1236, 1793
BstDSI	CCRYGG	1 cut(s)	725
BstF5I	GGATG	5 cut(s)	538, 844, 1176, 1995, 2072
BstFNI	CGCG	2 cut(s)	752, 1373
BstHHI	GCGC	2 cut(s)	1064, 1435
BstKTI	GATC	7 cut(s)	6, 115, 121, 198, 453, 811, 1384
BstMAI	GTCTC	4 cut(s)	1295, 1692, 1774, 2591
BstMBI	GATC	7 cut(s)	3, 112, 118, 195, 450, 808, 1381
BstMCI	CGRYCG	1 cut(s)	608
BstNI	CCWGG	1 cut(s)	2077
BstNSI	RCATGY	3 cut(s)	1769, 2061, 2350
BstSCI	CCNGG	1 cut(s)	2075
BstSFI	CTRYAG	3 cut(s)	420, 1134, 2363
BstUI	CGCG	2 cut(s)	752, 1373
BstV2I	GAAGAC	6 cut(s)	293, 365, 438, 1121, 2204, 2247
BstZI	CGGCCG	1 cut(s)	605
BsuI	GTATCC	1 cut(s)	2197
BsuRI	GGCC	6 cut(s)	34, 418, 471, 607, 1132, 2120
BtgI	CCRYGG	1 cut(s)	725
BtgZI	GCGATG	2 cut(s)	688, 1761
BtrI	CACGTC	1 cut(s)	2150
BtsCI	GGATG	5 cut(s)	538, 844, 1176, 1995, 2072
BtsI	GCAGTG	1 cut(s)	1005
BtsIMutI	CAGTG	6 cut(s)	576, 1005, 1557, 1861, 1954, 2034
BveI	ACCTGC	1 cut(s)	2404
Cac8I	GCNNGC	6 cut(s)	49, 223, 625, 1134, 1236, 1793
CaiI	CAGNNNCTG	5 cut(s)	233, 310, 419, 575, 1142
CciI	TCATGA	1 cut(s)	2499
CfoI	GCGC	2 cut(s)	1064, 1435
Cfr10I	RCCGGY	1 cut(s)	603
Cfr13I	GGNCC	4 cut(s)	377, 416, 1202, 2119
CseI	GACGC	2 cut(s)	443, 1230
Csp6I	GTAC	3 cut(s)	100, 993, 2055
CspCI	CAANNNNNGTGG	2 cut(s)	2361, 2396
CviQI	GTAC	3 cut(s)	100, 993, 2055
DpnI	GATC	7 cut(s)	5, 114, 120, 197, 452, 810, 1383
DpnII	GATC	7 cut(s)	3, 112, 118, 195, 450, 808, 1381
EaeI	YGGCCR	1 cut(s)	605
EagI	CGGCCG	1 cut(s)	605
Eam1104I	CTCTTC	8 cut(s)	56, 129, 265, 420, 906, 1049, 1555, 2518
EarI	CTCTTC	8 cut(s)	56, 129, 265, 420, 906, 1049, 1555, 2518
EciI	GGCGGA	3 cut(s)	156, 813, 1066
Ecl136II	GAGCTC	2 cut(s)	1993, 2309
EclXI	CGGCCG	1 cut(s)	605
Eco130I	CCWWGG	1 cut(s)	2191
Eco24I	GRGCYC	2 cut(s)	1995, 2311
Eco31I	GGTCTC	1 cut(s)	2591
Eco32I	GATATC	1 cut(s)	2550
Eco47I	GGWCC	2 cut(s)	377, 1202
Eco52I	CGGCCG	1 cut(s)	605
Eco53kI	GAGCTC	2 cut(s)	1993, 2309
Eco57I	CTGAAG	6 cut(s)	287, 396, 597, 651, 1196, 2244
Eco88I	CYCGRG	2 cut(s)	1796, 2050
EcoICRI	GAGCTC	2 cut(s)	1993, 2309
EcoO109I	RGGNCCY	1 cut(s)	416
EcoRI	GAATTC	1 cut(s)	490
EcoRII	CCWGG	1 cut(s)	2075
EcoRV	GATATC	1 cut(s)	2550
EcoT14I	CCWWGG	1 cut(s)	2191
EcoT22I	ATGCAT	1 cut(s)	1359
EcoT38I	GRGCYC	2 cut(s)	1995, 2311
ErhI	CCWWGG	1 cut(s)	2191
Esp3I	CGTCTC	1 cut(s)	1692
FalI	AAGNNNNNCTT	2 cut(s)	2227, 2259
FaqI	GGGAC	4 cut(s)	757, 1403, 1690, 2399
FauNDI	CATATG	1 cut(s)	2011
FbaI	TGATCA	1 cut(s)	3
FokI	GGATG	5 cut(s)	545, 851, 1163, 1982, 2059
FriOI	GRGCYC	2 cut(s)	1995, 2311
FspBI	CTAG	3 cut(s)	947, 1461, 1476
FspI	TGCGCA	2 cut(s)	1063, 1434
GlaI	GCGC	2 cut(s)	1063, 1434
GsaI	CCCAGC	3 cut(s)	1190, 1966, 2125
GsuI	CTGGAG	1 cut(s)	1505
HaeIII	GGCC	6 cut(s)	34, 418, 471, 607, 1132, 2120
HapII	CCGG	4 cut(s)	530, 604, 608, 672
HgaI	GACGC	2 cut(s)	443, 1230
HhaI	GCGC	2 cut(s)	1064, 1435
Hin1I	GRCGYC	1 cut(s)	435
Hin6I	GCGC	2 cut(s)	1062, 1433
HinP1I	GCGC	2 cut(s)	1062, 1433
HincII	GTYRAC	1 cut(s)	1897
HindII	GTYRAC	1 cut(s)	1897
HindIII	AAGCTT	3 cut(s)	621, 965, 1192
HpaII	CCGG	4 cut(s)	530, 604, 608, 672
HphI	GGTGA	5 cut(s)	1674, 1764, 1814, 2165, 2459
Hpy166II	GTNNAC	3 cut(s)	1501, 1810, 1897
Hpy8I	GTNNAC	3 cut(s)	1501, 1810, 1897
Hpy99I	CGWCG	3 cut(s)	742, 1015, 1246
HpyAV	CCTTC	7 cut(s)	24, 626, 775, 1032, 1099, 1260, 1638
HpyCH4III	ACNGT	8 cut(s)	1038, 1073, 1393, 1686, 1742, 1856, 1949, 2497
HpyCH4IV	ACGT	5 cut(s)	502, 684, 1013, 1812, 2149
HpySE526I	ACGT	5 cut(s)	502, 684, 1013, 1812, 2149
Hsp92I	GRCGYC	1 cut(s)	435
HspAI	GCGC	2 cut(s)	1062, 1433
Ksp22I	TGATCA	1 cut(s)	3
Kzo9I	GATC	7 cut(s)	3, 112, 118, 195, 450, 808, 1381
LmnI	GCTCC	5 cut(s)	169, 769, 823, 832, 1231
LweI	GCATC	6 cut(s)	523, 647, 1049, 1108, 1835, 1899
MaeI	CTAG	3 cut(s)	947, 1461, 1476
MaeII	ACGT	5 cut(s)	502, 684, 1013, 1812, 2149
MaeIII	GTNAC	4 cut(s)	599, 1073, 1393, 1918
MalI	GATC	7 cut(s)	5, 114, 120, 197, 452, 810, 1383
MbiI	CCGCTC	1 cut(s)	1841
MboI	GATC	7 cut(s)	3, 112, 118, 195, 450, 808, 1381
MfeI	CAATTG	1 cut(s)	582
MhlI	GDGCHC	4 cut(s)	131, 701, 1995, 2311
MlyI	GAGTC	6 cut(s)	277, 307, 506, 647, 1712, 2536
MmeI	TCCRAC	3 cut(s)	177, 747, 1675
Mph1103I	ATGCAT	1 cut(s)	1359
MroXI	GAANNNNTTC	1 cut(s)	2348
MseI	TTAA	5 cut(s)	774, 969, 1506, 1593, 1976
MspA1I	CMGCKG	4 cut(s)	230, 310, 1045, 2362
MspCI	CTTAAG	1 cut(s)	773
MspI	CCGG	4 cut(s)	530, 604, 608, 672
MspR9I	CCNGG	1 cut(s)	2077
MunI	CAATTG	1 cut(s)	582
Mva1269I	GAATGC	2 cut(s)	1216, 1825
MvaI	CCWGG	1 cut(s)	2077
MvnI	CGCG	2 cut(s)	752, 1373
NdeI	CATATG	1 cut(s)	2011
NdeII	GATC	7 cut(s)	3, 112, 118, 195, 450, 808, 1381
NlaIV	GGNNCC	4 cut(s)	379, 819, 1165, 1881
NmeAIII	GCCGAG	1 cut(s)	742
NmuCI	GTSAC	3 cut(s)	599, 1073, 1918
NsbI	TGCGCA	2 cut(s)	1063, 1434
NsiI	ATGCAT	1 cut(s)	1359
NspI	RCATGY	3 cut(s)	1769, 2061, 2350
NspV	TTCGAA	2 cut(s)	494, 2213
PaeR7I	CTCGAG	1 cut(s)	1796
PagI	TCATGA	1 cut(s)	2499
PciI	ACATGT	1 cut(s)	2346
PcsI	WCGNNNNNNNCGW	2 cut(s)	359, 2562
PctI	GAATGC	2 cut(s)	1216, 1825
PdmI	GAANNNNTTC	1 cut(s)	2348
PfeI	GAWTC	8 cut(s)	66, 315, 385, 391, 734, 854, 1028, 2170
PflMI	CCANNNNNTGG	1 cut(s)	1556
PleI	GAGTC	6 cut(s)	276, 306, 506, 647, 1711, 2536
PpsI	GAGTC	6 cut(s)	276, 306, 506, 647, 1711, 2536
Ppu21I	YACGTR	2 cut(s)	503, 685
PscI	ACATGT	1 cut(s)	2346
Psp124BI	GAGCTC	2 cut(s)	1995, 2311
Psp6I	CCWGG	1 cut(s)	2075
PspFI	CCCAGC	3 cut(s)	1186, 1962, 2121
PspGI	CCWGG	1 cut(s)	2075
PspN4I	GGNNCC	4 cut(s)	379, 819, 1165, 1881
PspPI	GGNCC	4 cut(s)	377, 416, 1202, 2119
PspXI	VCTCGAGB	1 cut(s)	1796
PstI	CTGCAG	2 cut(s)	1138, 2367
PstNI	CAGNNNCTG	5 cut(s)	233, 310, 419, 575, 1142
PvuII	CAGCTG	4 cut(s)	230, 310, 1045, 2362
RsaI	GTAC	3 cut(s)	101, 994, 2056
RsaNI	GTAC	3 cut(s)	100, 993, 2055
SacI	GAGCTC	2 cut(s)	1995, 2311
SaqAI	TTAA	5 cut(s)	774, 969, 1506, 1593, 1976
Sau3AI	GATC	7 cut(s)	3, 112, 118, 195, 450, 808, 1381
Sau96I	GGNCC	4 cut(s)	377, 416, 1202, 2119
SchI	GAGTC	6 cut(s)	277, 307, 506, 647, 1712, 2536
ScrFI	CCNGG	1 cut(s)	2077
SduI	GDGCHC	4 cut(s)	131, 701, 1995, 2311
SfaNI	GCATC	6 cut(s)	523, 647, 1049, 1108, 1835, 1899
SfcI	CTRYAG	3 cut(s)	420, 1134, 2363
Sfr274I	CTCGAG	1 cut(s)	1796
SfuI	TTCGAA	2 cut(s)	494, 2213
SinI	GGWCC	2 cut(s)	377, 1202
SlaI	CTCGAG	1 cut(s)	1796
SmlI	CTYRAG	3 cut(s)	773, 1575, 1796
SmoI	CTYRAG	3 cut(s)	773, 1575, 1796
SspI	AATATT	1 cut(s)	2097
SspMI	CTAG	3 cut(s)	947, 1461, 1476
SstI	GAGCTC	2 cut(s)	1995, 2311
StyD4I	CCNGG	1 cut(s)	2075
StyI	CCWWGG	1 cut(s)	2191
TaaI	ACNGT	8 cut(s)	1038, 1073, 1393, 1686, 1742, 1856, 1949, 2497
TaiI	ACGT	5 cut(s)	505, 687, 1016, 1815, 2152
TaqII	GACCGA	1 cut(s)	2216
TauI	GCSGC	5 cut(s)	172, 175, 1051, 1841, 2408
TfiI	GAWTC	8 cut(s)	66, 315, 385, 391, 734, 854, 1028, 2170
Tru1I	TTAA	5 cut(s)	774, 969, 1506, 1593, 1976
Tru9I	TTAA	5 cut(s)	774, 969, 1506, 1593, 1976
TscAI	CASTG	6 cut(s)	576, 1012, 1557, 1861, 1954, 2041
TseFI	GTSAC	3 cut(s)	599, 1073, 1918
Tsp45I	GTSAC	3 cut(s)	599, 1073, 1918
TspGWI	ACGGA	3 cut(s)	310, 714, 1405
TspRI	CASTG	6 cut(s)	576, 1012, 1557, 1861, 1954, 2041
Van91I	CCANNNNNTGG	1 cut(s)	1556
Vha464I	CTTAAG	1 cut(s)	773
VpaK11BI	GGWCC	2 cut(s)	377, 1202
XapI	RAATTY	6 cut(s)	253, 490, 803, 1291, 2065, 2329
XceI	RCATGY	3 cut(s)	1769, 2061, 2350
XhoI	CTCGAG	1 cut(s)	1796
XmnI	GAANNNNTTC	1 cut(s)	2348
XspI	CTAG	3 cut(s)	947, 1461, 1476
Zsp2I	ATGCAT	1 cut(s)	1359

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.