Protein TIME FOR
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G63180 AT3G63180 |
| fragaria_vesca | FvH4_2g23490 FvH4_2g23490 |
| malus_domestica | MD03G1263800.v1.1 MD11G1284500.v1.1 |
| prunus_persica | Prupe.8G240200_v2.0.a1 Prupe.8G240200_v2.0.a1 Prupe.8G240200_v2.0.a1 |
| pyrus_communis | pycom03g21150 pycom11g25200 |
| rosa_chinensis | RchiOBHm_Chr6g0290961 |
| rosa_laevigata | RLG00000012160 |
| rosa_multiflora | Rmu_sc0001577.1_g000015 |
| rosa_roxburghii | Rroxscaffold_7G00176510 |
| rosa_rugosa | Rorug06G0216500 Rorug06G0216600 Rorug06G0216700 |
| rosa_samantha | Rh6AG326400 Rh6BG334000 Rh6CG340100 Rh6DG327300 |
| rosa_wichuraiana | Rw6G028380 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1181 |
| Acc16I | TGCGCA | 1 cut(s) | 1114 |
| Acc36I | ACCTGC | 2 cut(s) | 1181, 2428 |
| Acc65I | GGTACC | 1 cut(s) | 802 |
| AccB1I | GGYRCC | 3 cut(s) | 802, 1214, 1993 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 217 |
| AccIII | TCCGGA | 1 cut(s) | 2516 |
| AciI | CCGC | 5 cut(s) | 70, 896, 1044, 1832, 1991 |
| AclWI | GGATC | 1 cut(s) | 626 |
| AcoI | YGGCCR | 2 cut(s) | 67, 1181 |
| AcsI | RAATTY | 6 cut(s) | 839, 1075, 1403, 1782, 1984, 2371 |
| AcuI | CTGAAG | 7 cut(s) | 276, 306, 768, 1599, 1883, 2390, 2538 |
| AcvI | CACGTG | 1 cut(s) | 308 |
| AfaI | GTAC | 5 cut(s) | 804, 1574, 1592, 2140, 2649 |
| AfeI | AGCGCT | 1 cut(s) | 2455 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 217, 826, 1190, 1211, 1250 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 268, 300, 2147, 2179 |
| Alw21I | GWGCWC | 3 cut(s) | 515, 642, 2218 |
| Alw26I | GTCTC | 6 cut(s) | 232, 631, 655, 1092, 1264, 1827 |
| Alw44I | GTGCAC | 1 cut(s) | 2214 |
| AlwI | GGATC | 1 cut(s) | 626 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 47, 364, 1526 |
| Ama87I | CYCGRG | 3 cut(s) | 115, 635, 1070 |
| Aor13HI | TCCGGA | 1 cut(s) | 2516 |
| Aor51HI | AGCGCT | 1 cut(s) | 2455 |
| AoxI | GGCC | 4 cut(s) | 67, 852, 1181, 1365 |
| ApaLI | GTGCAC | 1 cut(s) | 2214 |
| ApoI | RAATTY | 6 cut(s) | 839, 1075, 1403, 1782, 1984, 2371 |
| AseI | ATTAAT | 1 cut(s) | 1584 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 586, 2263, 2590 |
| Asp718I | GGTACC | 1 cut(s) | 802 |
| AspLEI | GCGC | 2 cut(s) | 1115, 2456 |
| AspS9I | GGNCC | 5 cut(s) | 853, 1391, 1457, 1568, 1676 |
| AsuC2I | CCSGG | 6 cut(s) | 116, 117, 554, 760, 1071, 1072 |
| AsuHPI | GGTGA | 5 cut(s) | 232, 1112, 1694, 1931, 2225 |
| AvaI | CYCGRG | 3 cut(s) | 115, 635, 1070 |
| AvaII | GGWCC | 4 cut(s) | 1391, 1457, 1568, 1676 |
| BaeGI | GKGCMC | 1 cut(s) | 2218 |
| BalI | TGGCCA | 1 cut(s) | 1183 |
| BanI | GGYRCC | 3 cut(s) | 802, 1214, 1993 |
| BanII | GRGCYC | 3 cut(s) | 116, 515, 642 |
| BbrPI | CACGTG | 1 cut(s) | 308 |
| BbsI | GAAGAC | 3 cut(s) | 429, 2258, 2455 |
| Bbv12I | GWGCWC | 3 cut(s) | 515, 642, 2218 |
| BccI | CCATC | 8 cut(s) | 50, 326, 1363, 1459, 1773, 2129, 2235, 2279 |
| BceAI | ACGGC | 2 cut(s) | 57, 229 |
| BciVI | GTATCC | 2 cut(s) | 766, 2251 |
| BclI | TGATCA | 1 cut(s) | 2278 |
| BcnI | CCSGG | 6 cut(s) | 116, 117, 554, 760, 1071, 1072 |
| BcoDI | GTCTC | 6 cut(s) | 232, 631, 655, 1092, 1264, 1827 |
| BfaI | CTAG | 7 cut(s) | 441, 516, 1107, 1250, 1817, 2477, 2673 |
| BfmI | CTRYAG | 3 cut(s) | 356, 447, 1527 |
| BfoI | RGCGCY | 1 cut(s) | 2457 |
| BfuAI | ACCTGC | 2 cut(s) | 1181, 2428 |
| BfuI | GTATCC | 2 cut(s) | 766, 2251 |
| Bme1390I | CCNGG | 6 cut(s) | 116, 117, 554, 760, 1071, 1072 |
| Bme18I | GGWCC | 4 cut(s) | 1391, 1457, 1568, 1676 |
| BmeT110I | CYCGRG | 3 cut(s) | 115, 635, 1070 |
| BmgT120I | GGNCC | 5 cut(s) | 853, 1391, 1457, 1568, 1676 |
| BmiI | GGNNCC | 5 cut(s) | 738, 804, 855, 1216, 1995 |
| BmrFI | CCNGG | 6 cut(s) | 116, 117, 554, 760, 1071, 1072 |
| BmrI | ACTGGG | 1 cut(s) | 2313 |
| BmsI | GCATC | 6 cut(s) | 1100, 1436, 1499, 1756, 1952, 2013 |
| BmuI | ACTGGG | 1 cut(s) | 2313 |
| BpiI | GAAGAC | 3 cut(s) | 429, 2258, 2455 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 265, 297 |
| BpmI | CTGGAG | 1 cut(s) | 420 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2641 |
| BpuMI | CCSGG | 6 cut(s) | 116, 117, 554, 760, 1071, 1072 |
| BsaAI | YACGTR | 1 cut(s) | 308 |
| BsaBI | GATNNNNATC | 1 cut(s) | 351 |
| BsaJI | CCNNGG | 7 cut(s) | 115, 272, 377, 654, 789, 1070, 2209 |
| BsaWI | WCCGGW | 2 cut(s) | 805, 2516 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 217, 826, 1190, 1211, 1250 |
| Bse118I | RCCGGY | 1 cut(s) | 1363 |
| Bse1I | ACTGG | 7 cut(s) | 403, 1040, 1443, 1632, 2260, 2308, 2395 |
| Bse3DI | GCAATG | 1 cut(s) | 2190 |
| Bse8I | GATNNNNATC | 1 cut(s) | 351 |
| BseAI | TCCGGA | 1 cut(s) | 2516 |
| BseDI | CCNNGG | 7 cut(s) | 115, 272, 377, 654, 789, 1070, 2209 |
| BseGI | GGATG | 2 cut(s) | 133, 2162 |
| BseJI | GATNNNNATC | 1 cut(s) | 351 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 217, 826, 1190, 1211, 1250 |
| BseMI | GCAATG | 1 cut(s) | 2190 |
| BseNI | ACTGG | 7 cut(s) | 403, 1040, 1443, 1632, 2260, 2308, 2395 |
| BseRI | GAGGAG | 4 cut(s) | 117, 467, 849, 1194 |
| BseSI | GKGCMC | 1 cut(s) | 2218 |
| BsgI | GTGCAG | 1 cut(s) | 2339 |
| BshFI | GGCC | 4 cut(s) | 69, 854, 1183, 1367 |
| BshNI | GGYRCC | 3 cut(s) | 802, 1214, 1993 |
| BsiHKAI | GWGCWC | 3 cut(s) | 515, 642, 2218 |
| BsiHKCI | CYCGRG | 3 cut(s) | 115, 635, 1070 |
| BsiSI | CCGG | 8 cut(s) | 116, 202, 553, 759, 806, 1071, 1364, 2517 |
| BslFI | GGGAC | 1 cut(s) | 1428 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 217, 826, 1190, 1211, 1250 |
| BsmAI | GTCTC | 6 cut(s) | 232, 631, 655, 1092, 1264, 1827 |
| BsmBI | CGTCTC | 1 cut(s) | 1264 |
| BsmFI | GGGAC | 1 cut(s) | 1428 |
| BsmI | GAATGC | 1 cut(s) | 1307 |
| BsnI | GGCC | 4 cut(s) | 69, 854, 1183, 1367 |
| BsoBI | CYCGRG | 3 cut(s) | 115, 635, 1070 |
| Bsp1286I | GDGCHC | 4 cut(s) | 116, 515, 642, 2218 |
| Bsp13I | TCCGGA | 1 cut(s) | 2516 |
| Bsp143I | GATC | 8 cut(s) | 238, 255, 631, 844, 1288, 1757, 2278, 2522 |
| BspACI | CCGC | 5 cut(s) | 70, 896, 1044, 1832, 1991 |
| BspANI | GGCC | 4 cut(s) | 69, 854, 1183, 1367 |
| BspEI | TCCGGA | 1 cut(s) | 2516 |
| BspHI | TCATGA | 1 cut(s) | 2281 |
| BspLI | GGNNCC | 5 cut(s) | 738, 804, 855, 1216, 1995 |
| BspMAI | CTGCAG | 2 cut(s) | 360, 1531 |
| BspMI | ACCTGC | 2 cut(s) | 1181, 2428 |
| BspPI | GGATC | 1 cut(s) | 626 |
| BspQI | GCTCTTC | 1 cut(s) | 2581 |
| BspT107I | GGYRCC | 3 cut(s) | 802, 1214, 1993 |
| BsrDI | GCAATG | 1 cut(s) | 2190 |
| BsrFI | RCCGGY | 1 cut(s) | 1363 |
| BsrI | ACTGG | 7 cut(s) | 403, 1040, 1443, 1632, 2260, 2308, 2395 |
| BssAI | RCCGGY | 1 cut(s) | 1363 |
| BssECI | CCNNGG | 7 cut(s) | 115, 272, 377, 654, 789, 1070, 2209 |
| BssMI | GATC | 8 cut(s) | 238, 255, 631, 844, 1288, 1757, 2278, 2522 |
| BssT1I | CCWWGG | 3 cut(s) | 654, 789, 2209 |
| Bst4CI | ACNGT | 4 cut(s) | 303, 448, 1522, 2317 |
| Bst6I | CTCTTC | 4 cut(s) | 10, 102, 2581, 2613 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 47, 1433, 1885 |
| BstBAI | YACGTR | 1 cut(s) | 308 |
| BstC8I | GCNNGC | 5 cut(s) | 199, 1135, 1185, 1365, 1910 |
| BstF5I | GGATG | 2 cut(s) | 133, 2162 |
| BstH2I | RGCGCY | 1 cut(s) | 2457 |
| BstHHI | GCGC | 2 cut(s) | 1115, 2456 |
| BstKTI | GATC | 8 cut(s) | 241, 258, 634, 847, 1291, 1760, 2281, 2525 |
| BstMAI | GTCTC | 6 cut(s) | 232, 631, 655, 1092, 1264, 1827 |
| BstMBI | GATC | 8 cut(s) | 238, 255, 631, 844, 1288, 1757, 2278, 2522 |
| BstNSI | RCATGY | 1 cut(s) | 2110 |
| BstSCI | CCNGG | 6 cut(s) | 114, 115, 552, 758, 1069, 1070 |
| BstSFI | CTRYAG | 3 cut(s) | 356, 447, 1527 |
| BstSLI | GKGCMC | 1 cut(s) | 2218 |
| BstV2I | GAAGAC | 3 cut(s) | 429, 2258, 2455 |
| BsuI | GTATCC | 2 cut(s) | 766, 2251 |
| BsuRI | GGCC | 4 cut(s) | 69, 854, 1183, 1367 |
| BtgZI | GCGATG | 1 cut(s) | 1114 |
| BtsCI | GGATG | 2 cut(s) | 133, 2162 |
| BtsI | GCAGTG | 3 cut(s) | 914, 1665, 2059 |
| BtsIMutI | CAGTG | 6 cut(s) | 914, 1625, 1665, 2059, 2131, 2322 |
| BveI | ACCTGC | 2 cut(s) | 1181, 2428 |
| Cac8I | GCNNGC | 5 cut(s) | 199, 1135, 1185, 1365, 1910 |
| CaiI | CAGNNNCTG | 3 cut(s) | 47, 364, 1526 |
| CciI | TCATGA | 1 cut(s) | 2281 |
| CfoI | GCGC | 2 cut(s) | 1115, 2456 |
| Cfr10I | RCCGGY | 1 cut(s) | 1363 |
| Cfr13I | GGNCC | 5 cut(s) | 853, 1391, 1457, 1568, 1676 |
| Cfr9I | CCCGGG | 2 cut(s) | 115, 1070 |
| CseI | GACGC | 2 cut(s) | 358, 1246 |
| Csp6I | GTAC | 5 cut(s) | 803, 1573, 1591, 2139, 2648 |
| CviQI | GTAC | 5 cut(s) | 803, 1573, 1591, 2139, 2648 |
| DpnI | GATC | 8 cut(s) | 240, 257, 633, 846, 1290, 1759, 2280, 2524 |
| DpnII | GATC | 8 cut(s) | 238, 255, 631, 844, 1288, 1757, 2278, 2522 |
| EaeI | YGGCCR | 2 cut(s) | 67, 1181 |
| Eam1104I | CTCTTC | 4 cut(s) | 10, 102, 2581, 2613 |
| EarI | CTCTTC | 4 cut(s) | 10, 102, 2581, 2613 |
| EciI | GGCGGA | 1 cut(s) | 911 |
| Ecl136II | GAGCTC | 2 cut(s) | 513, 640 |
| Eco130I | CCWWGG | 3 cut(s) | 654, 789, 2209 |
| Eco24I | GRGCYC | 3 cut(s) | 116, 515, 642 |
| Eco47I | GGWCC | 4 cut(s) | 1391, 1457, 1568, 1676 |
| Eco47III | AGCGCT | 1 cut(s) | 2455 |
| Eco53kI | GAGCTC | 2 cut(s) | 513, 640 |
| Eco57I | CTGAAG | 7 cut(s) | 276, 306, 768, 1599, 1883, 2390, 2538 |
| Eco72I | CACGTG | 1 cut(s) | 308 |
| Eco88I | CYCGRG | 3 cut(s) | 115, 635, 1070 |
| EcoICRI | GAGCTC | 2 cut(s) | 513, 640 |
| EcoRI | GAATTC | 2 cut(s) | 1075, 2371 |
| EcoT14I | CCWWGG | 3 cut(s) | 654, 789, 2209 |
| EcoT22I | ATGCAT | 2 cut(s) | 1389, 1492 |
| EcoT38I | GRGCYC | 3 cut(s) | 116, 515, 642 |
| ErhI | CCWWGG | 3 cut(s) | 654, 789, 2209 |
| Esp3I | CGTCTC | 1 cut(s) | 1264 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 891, 923, 2084, 2116 |
| FaqI | GGGAC | 1 cut(s) | 1428 |
| FauNDI | CATATG | 1 cut(s) | 213 |
| FbaI | TGATCA | 1 cut(s) | 2278 |
| FokI | GGATG | 2 cut(s) | 140, 2149 |
| FriOI | GRGCYC | 3 cut(s) | 116, 515, 642 |
| FspBI | CTAG | 7 cut(s) | 441, 516, 1107, 1250, 1817, 2477, 2673 |
| FspI | TGCGCA | 1 cut(s) | 1114 |
| GlaI | GCGC | 2 cut(s) | 1114, 2455 |
| GsuI | CTGGAG | 1 cut(s) | 420 |
| HaeII | RGCGCY | 1 cut(s) | 2457 |
| HaeIII | GGCC | 4 cut(s) | 69, 854, 1183, 1367 |
| HapII | CCGG | 8 cut(s) | 116, 202, 553, 759, 806, 1071, 1364, 2517 |
| HgaI | GACGC | 2 cut(s) | 358, 1246 |
| HhaI | GCGC | 2 cut(s) | 1115, 2456 |
| Hin6I | GCGC | 2 cut(s) | 1113, 2454 |
| HinP1I | GCGC | 2 cut(s) | 1113, 2454 |
| HincII | GTYRAC | 4 cut(s) | 1479, 1518, 2313, 2660 |
| HindII | GTYRAC | 4 cut(s) | 1479, 1518, 2313, 2660 |
| HindIII | AAGCTT | 1 cut(s) | 1334 |
| HpaII | CCGG | 8 cut(s) | 116, 202, 553, 759, 806, 1071, 1364, 2517 |
| HphI | GGTGA | 5 cut(s) | 232, 1112, 1694, 1931, 2225 |
| Hpy166II | GTNNAC | 7 cut(s) | 1171, 1479, 1518, 2147, 2216, 2313, 2660 |
| Hpy8I | GTNNAC | 7 cut(s) | 1171, 1479, 1518, 2147, 2216, 2313, 2660 |
| Hpy99I | CGWCG | 1 cut(s) | 374 |
| HpyCH4III | ACNGT | 4 cut(s) | 303, 448, 1522, 2317 |
| HpyCH4IV | ACGT | 2 cut(s) | 307, 1960 |
| HpySE526I | ACGT | 2 cut(s) | 307, 1960 |
| HspAI | GCGC | 2 cut(s) | 1113, 2454 |
| Kpn2I | TCCGGA | 1 cut(s) | 2516 |
| KpnI | GGTACC | 1 cut(s) | 806 |
| KroI | GCCGGC | 1 cut(s) | 1363 |
| KroNI | GCCGGC | 1 cut(s) | 1365 |
| Ksp22I | TGATCA | 1 cut(s) | 2278 |
| Kzo9I | GATC | 8 cut(s) | 238, 255, 631, 844, 1288, 1757, 2278, 2522 |
| LguI | GCTCTTC | 1 cut(s) | 2581 |
| LmnI | GCTCC | 4 cut(s) | 736, 808, 1207, 2461 |
| LweI | GCATC | 6 cut(s) | 1100, 1436, 1499, 1756, 1952, 2013 |
| MaeI | CTAG | 7 cut(s) | 441, 516, 1107, 1250, 1817, 2477, 2673 |
| MaeII | ACGT | 2 cut(s) | 307, 1960 |
| MaeIII | GTNAC | 9 cut(s) | 86, 303, 695, 1159, 1869, 1919, 2032, 2169, 2299 |
| MalI | GATC | 8 cut(s) | 240, 257, 633, 846, 1290, 1759, 2280, 2524 |
| MboI | GATC | 8 cut(s) | 238, 255, 631, 844, 1288, 1757, 2278, 2522 |
| MhlI | GDGCHC | 4 cut(s) | 116, 515, 642, 2218 |
| MlsI | TGGCCA | 1 cut(s) | 1183 |
| MluNI | TGGCCA | 1 cut(s) | 1183 |
| MlyI | GAGTC | 3 cut(s) | 411, 1829, 2599 |
| MmeI | TCCRAC | 2 cut(s) | 1216, 2292 |
| Mox20I | TGGCCA | 1 cut(s) | 1183 |
| Mph1103I | ATGCAT | 2 cut(s) | 1389, 1492 |
| MroI | TCCGGA | 1 cut(s) | 2516 |
| MroNI | GCCGGC | 1 cut(s) | 1363 |
| MroXI | GAANNNNTTC | 3 cut(s) | 586, 2263, 2590 |
| MscI | TGGCCA | 1 cut(s) | 1183 |
| MseI | TTAA | 4 cut(s) | 599, 813, 1584, 2090 |
| MslI | CAYNNNNRTG | 1 cut(s) | 2235 |
| Msp20I | TGGCCA | 1 cut(s) | 1183 |
| MspA1I | CMGCKG | 1 cut(s) | 44 |
| MspI | CCGG | 8 cut(s) | 116, 202, 553, 759, 806, 1071, 1364, 2517 |
| MspR9I | CCNGG | 6 cut(s) | 116, 117, 554, 760, 1071, 1072 |
| Mva1269I | GAATGC | 1 cut(s) | 1307 |
| NaeI | GCCGGC | 1 cut(s) | 1365 |
| NciI | CCSGG | 6 cut(s) | 116, 117, 554, 760, 1071, 1072 |
| NdeI | CATATG | 1 cut(s) | 213 |
| NdeII | GATC | 8 cut(s) | 238, 255, 631, 844, 1288, 1757, 2278, 2522 |
| NgoMIV | GCCGGC | 1 cut(s) | 1363 |
| NlaIV | GGNNCC | 5 cut(s) | 738, 804, 855, 1216, 1995 |
| NmuCI | GTSAC | 5 cut(s) | 303, 695, 1869, 1919, 2169 |
| NsbI | TGCGCA | 1 cut(s) | 1114 |
| NsiI | ATGCAT | 2 cut(s) | 1389, 1492 |
| NspI | RCATGY | 1 cut(s) | 2110 |
| PagI | TCATGA | 1 cut(s) | 2281 |
| PaqCI | CACCTGC | 1 cut(s) | 1181 |
| PciSI | GCTCTTC | 1 cut(s) | 2581 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 431 |
| PctI | GAATGC | 1 cut(s) | 1307 |
| PdiI | GCCGGC | 1 cut(s) | 1365 |
| PdmI | GAANNNNTTC | 3 cut(s) | 586, 2263, 2590 |
| PfeI | GAWTC | 9 cut(s) | 9, 352, 409, 587, 872, 961, 1280, 1316, 1793 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 217 |
| PleI | GAGTC | 3 cut(s) | 410, 1828, 2599 |
| PmaCI | CACGTG | 1 cut(s) | 308 |
| PmlI | CACGTG | 1 cut(s) | 308 |
| PpsI | GAGTC | 3 cut(s) | 410, 1828, 2599 |
| Ppu21I | YACGTR | 1 cut(s) | 308 |
| PshBI | ATTAAT | 1 cut(s) | 1584 |
| Psp124BI | GAGCTC | 2 cut(s) | 515, 642 |
| PspCI | CACGTG | 1 cut(s) | 308 |
| PspN4I | GGNNCC | 5 cut(s) | 738, 804, 855, 1216, 1995 |
| PspPI | GGNCC | 5 cut(s) | 853, 1391, 1457, 1568, 1676 |
| PstI | CTGCAG | 2 cut(s) | 360, 1531 |
| PstNI | CAGNNNCTG | 3 cut(s) | 47, 364, 1526 |
| PvuII | CAGCTG | 1 cut(s) | 44 |
| RsaI | GTAC | 5 cut(s) | 804, 1574, 1592, 2140, 2649 |
| RsaNI | GTAC | 5 cut(s) | 803, 1573, 1591, 2139, 2648 |
| RseI | CAYNNNNRTG | 1 cut(s) | 2235 |
| SacI | GAGCTC | 2 cut(s) | 515, 642 |
| SapI | GCTCTTC | 1 cut(s) | 2581 |
| SaqAI | TTAA | 4 cut(s) | 599, 813, 1584, 2090 |
| Sau3AI | GATC | 8 cut(s) | 238, 255, 631, 844, 1288, 1757, 2278, 2522 |
| Sau96I | GGNCC | 5 cut(s) | 853, 1391, 1457, 1568, 1676 |
| SchI | GAGTC | 3 cut(s) | 411, 1829, 2599 |
| ScrFI | CCNGG | 6 cut(s) | 116, 117, 554, 760, 1071, 1072 |
| SduI | GDGCHC | 4 cut(s) | 116, 515, 642, 2218 |
| SfaNI | GCATC | 6 cut(s) | 1100, 1436, 1499, 1756, 1952, 2013 |
| SfcI | CTRYAG | 3 cut(s) | 356, 447, 1527 |
| SinI | GGWCC | 4 cut(s) | 1391, 1457, 1568, 1676 |
| SmaI | CCCGGG | 2 cut(s) | 117, 1072 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 2235 |
| SsiI | CCGC | 5 cut(s) | 70, 896, 1044, 1832, 1991 |
| SspMI | CTAG | 7 cut(s) | 441, 516, 1107, 1250, 1817, 2477, 2673 |
| SstI | GAGCTC | 2 cut(s) | 515, 642 |
| StyD4I | CCNGG | 6 cut(s) | 114, 115, 552, 758, 1069, 1070 |
| StyI | CCWWGG | 3 cut(s) | 654, 789, 2209 |
| TaaI | ACNGT | 4 cut(s) | 303, 448, 1522, 2317 |
| TaiI | ACGT | 2 cut(s) | 310, 1963 |
| TaqI | TCGA | 3 cut(s) | 372, 412, 2369 |
| TauI | GCSGC | 1 cut(s) | 72 |
| TfiI | GAWTC | 9 cut(s) | 9, 352, 409, 587, 872, 961, 1280, 1316, 1793 |
| Tru1I | TTAA | 4 cut(s) | 599, 813, 1584, 2090 |
| Tru9I | TTAA | 4 cut(s) | 599, 813, 1584, 2090 |
| TscAI | CASTG | 6 cut(s) | 921, 1632, 1665, 2059, 2131, 2322 |
| TseFI | GTSAC | 5 cut(s) | 303, 695, 1869, 1919, 2169 |
| Tsp45I | GTSAC | 5 cut(s) | 303, 695, 1869, 1919, 2169 |
| TspDTI | ATGAA | 9 cut(s) | 404, 512, 1068, 1300, 1656, 1706, 1785, 2024, 2151 |
| TspGWI | ACGGA | 2 cut(s) | 534, 1560 |
| TspMI | CCCGGG | 2 cut(s) | 115, 1070 |
| TspRI | CASTG | 6 cut(s) | 921, 1632, 1665, 2059, 2131, 2322 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 217 |
| VneI | GTGCAC | 1 cut(s) | 2214 |
| VpaK11BI | GGWCC | 4 cut(s) | 1391, 1457, 1568, 1676 |
| VspI | ATTAAT | 1 cut(s) | 1584 |
| XapI | RAATTY | 6 cut(s) | 839, 1075, 1403, 1782, 1984, 2371 |
| XceI | RCATGY | 1 cut(s) | 2110 |
| XmaI | CCCGGG | 2 cut(s) | 115, 1070 |
| XmnI | GAANNNNTTC | 3 cut(s) | 586, 2263, 2590 |
| XspI | CTAG | 7 cut(s) | 441, 516, 1107, 1250, 1817, 2477, 2673 |
| Zsp2I | ATGCAT | 2 cut(s) | 1389, 1492 |