Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0008448

Physical Location & Seq

Genomic Coordinates Reverse (-)

40286936 .. 40290978

Gene Structure 4043 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1284500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2793 bp

ATGAGCATGGAGAGAAGCAGAGAAACAAGAAGGCCAACCATGGCAGCAAGCAAAAACCAGAAGAGAAGCATGAGAGAGCAGAGCAAAAAACAGAGGAGGTACAGAAGAGGAGATCAAGATCAAGACAGCACAGAAGAGAGCTTGGGTTTTTCCGACCACCAAGCTCCGCCGCCGCTAAAGGCTGCCAGTGAAGTGATCGGAGTTGCAGTTCCCAGAAAAGCTCGCTCAGCTGCTGGAAAGAGGTCGCATGAAAATTTCTCTTCTGAGAGTTATGGAGGAGTTGGGGAGGAAGAACAGAGTCTTCAGAAGCTGAGCTTTAAAGCTGCGTCGCTTTCTTTCTCAAACGTTTCATCGAGGAAAACGATGAAACGAAATGGACCCAAGATTCGGATTCCGAAATCTTCAGGGCCTGTAGAAGAAGAGGACATTGAGATTGAGATCGCCGAGGTTCTCTATGGCCTTATGAATCAAACCCAGAATTCAAAAACTTCGAAGTGCGAAACTGAAGATAGAAATGATTCCGAGGAGAAGAAAGCGGAGGATGGAAGTGCTTCAATGGCGGTTCAAAGCAGCTCAGCTGGTGAAGGGGTTGAAGTCGAAGAAAGTGACCAGCCAGAAAAGATTGAAGCTTGCTCTGACGGTGCATCAGGGTCAATGGACTCGCACGAGGAGAAAGCCGAAAATCCATACGCGGAAGAAAAGAGCATCATCGCCACAAAAGCCGAGTTTTCGTGTGAAGATTCGAAAGGGACAAAAGCGATTTCAACTGGGTTGGAGCATAAGAGGAAGAGAGAGGGGGAAAGATTTGAAATTGATCTGATGGCTCCTCCTCCTATGGACCAGGATGACGACTTTACAGATTCTGTATCTGATCCTAAACCTCCGACCCAAGATGTAGATATGATCGAAGTTTTGGTAAAGAAAGAAGAGAAAGTGGAAATATTTCCGGAGGAAGTTGTGGTAGAAAAGCTGGAAGAGAAGAAGCAAAATGAGAATCCAAATCAAGATAGTAGCAGTAAATCCACTACCAGATTACAGCCTTCCGATTCCCTTCTGCCTCAGCCGCCACGAAAGAGATGCGCAACCCACTGTCACATTGCTCACAACATTCACTTGCATCAGAAGGTTGCACAGACAACCAATTTCTGGCCAGCAGCAACTGGTTCTGTTCCTCAATGTGGCACTAAGCCAGACATCCCATTGCTGGGAAGCTTCTCAGGTCCGAATCTTCAACATTCGCAGAAAAAGAAGCAGGCTGCGCCGAAGTTTTCAAGTGATAGTGGAAAAGACAGAAGTTCCGAGGCTGGGAATGTCATAGAAACATCACATAAATTGCAGCTTTCAGTTCAGCAAACTCCACAGCTAGCCTATGCTGGTAACCAAATGCATGGACATACTTTCGCACTTCCTCGGGTTGAACATCAAGCAGCTGTTGCACCAACCAGTAGTAAATCCGTCGTGTTGAAATTTGCACAATCAACAAACAATGCAGCACTCTCTAGCCATTTAGCTGCTAGACCTCTGGAGAGTTCATCAGTGAATTTTAATGGCTACCAATACCCCATTTCAGCTCATATACAAACAACACCAGTGTTTGGGGGAGGAAACCCTGCTCAAGCATTGCCTTTAATCAAATCGCCTTTCATTTCGAATCAAATGTTTCACCCTTCCTATGTTCAGCAGCATCAAGTCCAACCGTCTCATCAAAACGCAAACGCTTCATCACCTTCTCACAGGCAACATGAGTCCCATAAACCGAGGGAAACACAATTTAGTAGCAACAATTGTTTTTCTTCACAAAAGCAACGTGTATCCCCAGGTGAAACGAACATGGAGAATGCTGCATCTCCTGCTGCCTCTCATGCTCAGAACAGTGTTTATGGGCAGAATTTTTCGGTTCCATTTCAACCCGTCAACTTTACCCTGATGCCTTATGTGACAATGGGTGGCGGTGGCGGTGGCAGCGGCAGCGGAAACCAGGTTGAGCAATCACATAAACAGGGCTTAAAGGGTGGAGTTGAGCTCATCCCATCTAAGGCATATGGCATGTCATTTTCCTCCGTCACTGGAAACAACGGCTCGGGTTCATGCTTGAACTTTTCATCCATGGCACAAAATCCTGCAATATTTCAAAGCGTCCCAGATATGGCCCAGCAAGGGTATAAAATCACACCAGCACCTCAAGCTGGGCATCAAAAGAATCACCACCACCAAATATCCCAAAGGAAGACTGATGGTGGTTCGAACAATGCTGATGATGGGTTAAGAGCTGCTTCTGGGAAGTCTTCATCAGGTATTGTGCAGAGGCAGACCCTTGTTTTCGACAATCCATCGAGAACTCTCAACTTCATGTCGTCGAGTTCTCAACAGCAGAACCTGTTCCAGTTTCAGCTGCAGAACCCACATCTGTTGCAAAAGCAGCAACCCGCTGTTGCTGCCAAAGTCCCGAAAAGCGCCCCGGTTTCCTCCAAAGCTCTAATGCAATGCAATAGTCATCACCAATCTTCTCAGTTGAAAAACTCAACAGTCATGACTTGTTCCCTGCAACAAAGAAGAGGTTCACAAGGTCAGACTCAGATATCTTTCGGTGGAAACCCGAAATCAGCCTCAGCACCACAAGGACAAAAGAGACTCACTAACCACCACTCTTCATCAATCTCTGCATTACAGTCGCAGCAAACCGAGAATTCTTCGCTGAGCGGTAATGGCCCAATCTCCTCCCCTGCCTGTGGGAGGAACTTGGCATCAATTTTGAGCACATGTCCCAGCCACATTTCTGAACTCAAGTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

931

Amino Acids

100.77

Weight (kDa)

8.59

Isoelectric Point (pI)

64.67

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008448)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G63180 AT3G63180
fragaria_vesca	FvH4_2g23490 FvH4_2g23490
malus_domestica	MD03G1263800.v1.1 MD11G1284500.v1.1
prunus_persica	Prupe.8G240200_v2.0.a1 Prupe.8G240200_v2.0.a1 Prupe.8G240200_v2.0.a1
pyrus_communis	pycom03g21150 pycom11g25200
rosa_chinensis	RchiOBHm_Chr6g0290961
rosa_laevigata	RLG00000012160
rosa_multiflora	Rmu_sc0001577.1_g000015
rosa_roxburghii	Rroxscaffold_7G00176510
rosa_rugosa	Rorug06G0216500 Rorug06G0216600 Rorug06G0216700
rosa_samantha	Rh6AG326400 Rh6BG334000 Rh6CG340100 Rh6DG327300
rosa_wichuraiana	Rw6G028380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1081
AccB7I	CCANNNNNTGG	2 cut(s)	1146, 1595
AccBSI	CCGCTC	1 cut(s)	2700
AccII	CGCG	1 cut(s)	692
AccIII	TCCGGA	1 cut(s)	946
AclI	AACGTT	1 cut(s)	345
AclWI	GGATC	1 cut(s)	866
AcoI	YGGCCR	1 cut(s)	1148
AcsI	RAATTY	6 cut(s)	253, 478, 1466, 1540, 1888, 2686
AcuI	CTGAAG	3 cut(s)	287, 387, 525
AfaI	GTAC	1 cut(s)	101
AflIII	ACRYGT	2 cut(s)	1807, 2759
AjnI	CCWGG	3 cut(s)	840, 1816, 1977
AloI	GAACNNNNNNTCC	4 cut(s)	192, 224, 2087, 2119
Alw21I	GWGCWC	2 cut(s)	2025, 2759
Alw26I	GTCTC	2 cut(s)	1704, 2623
AlwI	GGATC	1 cut(s)	866
AlwNI	CAGNNNCTG	6 cut(s)	233, 310, 410, 863, 1160, 2377
Ama87I	CYCGRG	2 cut(s)	1410, 2080
Aor13HI	TCCGGA	1 cut(s)	946
AoxI	GGCC	6 cut(s)	32, 407, 457, 1148, 2148, 2707
ApoI	RAATTY	6 cut(s)	253, 478, 1466, 1540, 1888, 2686
ArsI	GACNNNNNNTTYG	2 cut(s)	369, 401
Asp700I	GAANNNNTTC	5 cut(s)	517, 550, 942, 2378, 2557
AspLEI	GCGC	3 cut(s)	1082, 1261, 2456
AspS9I	GGNCC	6 cut(s)	377, 407, 838, 1220, 2149, 2708
AsuC2I	CCSGG	1 cut(s)	2459
AsuHPI	GGTGA	6 cut(s)	593, 1655, 1716, 1832, 2195, 2489
AsuII	TTCGAA	4 cut(s)	491, 743, 1649, 2243
AsuNHI	GCTAGC	1 cut(s)	1363
AvaI	CYCGRG	2 cut(s)	1410, 2080
AvaII	GGWCC	3 cut(s)	377, 838, 1220
BalI	TGGCCA	1 cut(s)	1150
BanII	GRGCYC	1 cut(s)	2025
BauI	CACGAG	1 cut(s)	665
BbsI	GAAGAC	3 cut(s)	293, 2234, 2277
Bbv12I	GWGCWC	2 cut(s)	2025, 2759
BbvCI	CCTCAGC	2 cut(s)	1059, 2608
BccI	CCATC	6 cut(s)	536, 814, 2038, 2228, 2252, 2338
BceAI	ACGGC	1 cut(s)	2092
BcgI	CGANNNNNNTGC	4 cut(s)	1059, 1093, 2652, 2686
BciT130I	CCWGG	3 cut(s)	842, 1818, 1979
BciVI	GTATCC	1 cut(s)	1822
BcnI	CCSGG	1 cut(s)	2459
BcoDI	GTCTC	2 cut(s)	1704, 2623
BfaI	CTAG	4 cut(s)	1364, 1500, 1515, 2791
BfmI	CTRYAG	2 cut(s)	411, 2393
BfoI	RGCGCY	1 cut(s)	2457
BfuI	GTATCC	1 cut(s)	1822
BlpI	GCTNAGC	4 cut(s)	226, 311, 574, 2696
Bme1390I	CCNGG	4 cut(s)	842, 1818, 1979, 2459
Bme18I	GGWCC	3 cut(s)	377, 838, 1220
BmeT110I	CYCGRG	2 cut(s)	1410, 2080
BmgT120I	GGNCC	6 cut(s)	377, 407, 838, 1220, 2149, 2708
BmiI	GGNNCC	3 cut(s)	379, 825, 1899
BmrFI	CCNGG	4 cut(s)	842, 1818, 1979, 2459
BmrI	ACTGGG	1 cut(s)	777
BmsI	GCATC	9 cut(s)	653, 714, 1067, 1126, 1693, 1853, 1917, 2200, 2753
BmtI	GCTAGC	1 cut(s)	1367
BmuI	ACTGGG	1 cut(s)	777
BpiI	GAAGAC	3 cut(s)	293, 2234, 2277
BplI	GAGNNNNNCTC	2 cut(s)	2007, 2039
BpmI	CTGGAG	1 cut(s)	1544
Bpu10I	CCTNAGC	2 cut(s)	1059, 2608
Bpu1102I	GCTNAGC	4 cut(s)	226, 311, 574, 2696
Bpu14I	TTCGAA	4 cut(s)	491, 743, 1649, 2243
BpuEI	CTTGAG	3 cut(s)	1599, 2166, 2768
BpuMI	CCSGG	1 cut(s)	2459
BsaBI	GATNNNNATC	2 cut(s)	117, 437
BsaJI	CCNNGG	9 cut(s)	39, 444, 522, 1299, 1409, 1757, 1816, 2106, 2457
BsaWI	WCCGGW	1 cut(s)	946
BsaXI	ACNNNNNCTCC	2 cut(s)	192, 222
Bse1I	ACTGG	7 cut(s)	186, 772, 1165, 1443, 1589, 2071, 2383
Bse3DI	GCAATG	4 cut(s)	1095, 1199, 1619, 2489
Bse8I	GATNNNNATC	2 cut(s)	117, 437
BseAI	TCCGGA	1 cut(s)	946
BseBI	CCWGG	3 cut(s)	842, 1818, 1979
BseDI	CCNNGG	9 cut(s)	39, 444, 522, 1299, 1409, 1757, 1816, 2106, 2457
BseGI	GGATG	5 cut(s)	547, 850, 1194, 2025, 2102
BseJI	GATNNNNATC	2 cut(s)	117, 437
BseMI	GCAATG	4 cut(s)	1095, 1199, 1619, 2489
BseNI	ACTGG	7 cut(s)	186, 772, 1165, 1443, 1589, 2071, 2383
BseRI	GAGGAG	8 cut(s)	109, 123, 291, 539, 683, 816, 819, 2707
BseYI	CCCAGC	5 cut(s)	1204, 1304, 2151, 2186, 2765
BsgI	GTGCAG	1 cut(s)	2321
Bsh1236I	CGCG	1 cut(s)	692
BshFI	GGCC	6 cut(s)	34, 409, 459, 1150, 2150, 2709
BsiHKAI	GWGCWC	2 cut(s)	2025, 2759
BsiHKCI	CYCGRG	2 cut(s)	1410, 2080
BsiSI	CCGG	2 cut(s)	947, 2459
BslFI	GGGAC	5 cut(s)	763, 1732, 2123, 2429, 2748
BsmAI	GTCTC	2 cut(s)	1704, 2623
BsmBI	CGTCTC	1 cut(s)	1704
BsmFI	GGGAC	5 cut(s)	763, 1732, 2123, 2429, 2748
BsmI	GAATGC	1 cut(s)	1843
BsnI	GGCC	6 cut(s)	34, 409, 459, 1150, 2150, 2709
BsoBI	CYCGRG	2 cut(s)	1410, 2080
Bsp119I	TTCGAA	4 cut(s)	491, 743, 1649, 2243
Bsp1286I	GDGCHC	2 cut(s)	2025, 2759
Bsp13I	TCCGGA	1 cut(s)	946
Bsp143I	GATC	7 cut(s)	112, 118, 195, 438, 814, 871, 903
Bsp1720I	GCTNAGC	4 cut(s)	226, 311, 574, 2696
Bsp19I	CCATGG	2 cut(s)	39, 2106
BspANI	GGCC	6 cut(s)	34, 409, 459, 1150, 2150, 2709
BspEI	TCCGGA	1 cut(s)	946
BspFNI	CGCG	1 cut(s)	692
BspHI	TCATGA	1 cut(s)	2529
BspLI	GGNNCC	3 cut(s)	379, 825, 1899
BspMAI	CTGCAG	1 cut(s)	2397
BspOI	GCTAGC	1 cut(s)	1367
BspPI	GGATC	1 cut(s)	866
BspT104I	TTCGAA	4 cut(s)	491, 743, 1649, 2243
BsrBI	CCGCTC	1 cut(s)	2700
BsrDI	GCAATG	4 cut(s)	1095, 1199, 1619, 2489
BsrI	ACTGG	7 cut(s)	186, 772, 1165, 1443, 1589, 2071, 2383
BssECI	CCNNGG	9 cut(s)	39, 444, 522, 1299, 1409, 1757, 1816, 2106, 2457
BssMI	GATC	7 cut(s)	112, 118, 195, 438, 814, 871, 903
BssSI	CACGAG	1 cut(s)	665
BssT1I	CCWWGG	2 cut(s)	39, 2106
Bst2BI	CACGAG	1 cut(s)	665
Bst2UI	CCWGG	3 cut(s)	842, 1818, 1979
Bst4CI	ACNGT	6 cut(s)	641, 1091, 1698, 1874, 2527, 2670
BstAPI	GCANNNNNTGC	2 cut(s)	1433, 1850
BstBI	TTCGAA	4 cut(s)	491, 743, 1649, 2243
BstC8I	GCNNGC	6 cut(s)	49, 223, 631, 1152, 1254, 1365
BstDSI	CCRYGG	2 cut(s)	39, 2106
BstEII	GGTNACC	1 cut(s)	1376
BstENI	CCTNNNNNAGG	1 cut(s)	2731
BstF5I	GGATG	5 cut(s)	547, 850, 1194, 2025, 2102
BstFNI	CGCG	1 cut(s)	692
BstH2I	RGCGCY	1 cut(s)	2457
BstHHI	GCGC	3 cut(s)	1082, 1261, 2456
BstKTI	GATC	7 cut(s)	115, 121, 198, 441, 817, 874, 906
BstMAI	GTCTC	2 cut(s)	1704, 2623
BstMBI	GATC	7 cut(s)	112, 118, 195, 438, 814, 871, 903
BstNI	CCWGG	3 cut(s)	842, 1818, 1979
BstNSI	RCATGY	2 cut(s)	2050, 2763
BstPI	GGTNACC	1 cut(s)	1376
BstSCI	CCNGG	4 cut(s)	840, 1816, 1977, 2457
BstSFI	CTRYAG	2 cut(s)	411, 2393
BstUI	CGCG	1 cut(s)	692
BstV2I	GAAGAC	3 cut(s)	293, 2234, 2277
BstXI	CCANNNNNNTGG	1 cut(s)	1388
BsuI	GTATCC	1 cut(s)	1822
BsuRI	GGCC	6 cut(s)	34, 409, 459, 1150, 2150, 2709
BtgI	CCRYGG	2 cut(s)	39, 2106
BtgZI	GCGATG	1 cut(s)	694
BtsCI	GGATG	5 cut(s)	547, 850, 1194, 2025, 2102
BtsIMutI	CAGTG	6 cut(s)	193, 1087, 1542, 1596, 1879, 2064
Cac8I	GCNNGC	6 cut(s)	49, 223, 631, 1152, 1254, 1365
CaiI	CAGNNNCTG	6 cut(s)	233, 310, 410, 863, 1160, 2377
CciI	TCATGA	1 cut(s)	2529
CfoI	GCGC	3 cut(s)	1082, 1261, 2456
Cfr13I	GGNCC	6 cut(s)	377, 407, 838, 1220, 2149, 2708
CseI	GACGC	2 cut(s)	315, 2125
CsiI	ACCWGGT	1 cut(s)	1977
Csp6I	GTAC	1 cut(s)	100
CspCI	CAANNNNNGTGG	2 cut(s)	2391, 2426
CviQI	GTAC	1 cut(s)	100
DpnI	GATC	7 cut(s)	114, 120, 197, 440, 816, 873, 905
DpnII	GATC	7 cut(s)	112, 118, 195, 438, 814, 871, 903
DraI	TTTAAA	1 cut(s)	319
EaeI	YGGCCR	1 cut(s)	1148
EciI	GGCGGA	1 cut(s)	156
Ecl136II	GAGCTC	1 cut(s)	2023
Eco130I	CCWWGG	2 cut(s)	39, 2106
Eco24I	GRGCYC	1 cut(s)	2025
Eco32I	GATATC	1 cut(s)	2580
Eco47I	GGWCC	3 cut(s)	377, 838, 1220
Eco53kI	GAGCTC	1 cut(s)	2023
Eco57I	CTGAAG	3 cut(s)	287, 387, 525
Eco88I	CYCGRG	2 cut(s)	1410, 2080
Eco91I	GGTNACC	1 cut(s)	1376
EcoICRI	GAGCTC	1 cut(s)	2023
EcoNI	CCTNNNNNAGG	1 cut(s)	2731
EcoO109I	RGGNCCY	1 cut(s)	407
EcoO65I	GGTNACC	1 cut(s)	1376
EcoRI	GAATTC	2 cut(s)	478, 2686
EcoRII	CCWGG	3 cut(s)	840, 1816, 1977
EcoRV	GATATC	1 cut(s)	2580
EcoT14I	CCWWGG	2 cut(s)	39, 2106
EcoT22I	ATGCAT	1 cut(s)	1389
EcoT38I	GRGCYC	1 cut(s)	2025
ErhI	CCWWGG	2 cut(s)	39, 2106
Esp3I	CGTCTC	1 cut(s)	1704
FalI	AAGNNNNNCTT	4 cut(s)	299, 331, 2257, 2289
FaqI	GGGAC	5 cut(s)	763, 1732, 2123, 2429, 2748
FauI	CCCGC	1 cut(s)	2434
FauNDI	CATATG	1 cut(s)	2041
FokI	GGATG	5 cut(s)	554, 857, 1181, 2012, 2089
FriOI	GRGCYC	1 cut(s)	2025
FspBI	CTAG	4 cut(s)	1364, 1500, 1515, 2791
FspI	TGCGCA	1 cut(s)	1081
GlaI	GCGC	3 cut(s)	1081, 1260, 2455
GsaI	CCCAGC	5 cut(s)	1208, 1308, 2155, 2190, 2769
GsuI	CTGGAG	1 cut(s)	1544
HaeII	RGCGCY	1 cut(s)	2457
HaeIII	GGCC	6 cut(s)	34, 409, 459, 1150, 2150, 2709
HapII	CCGG	2 cut(s)	947, 2459
HgaI	GACGC	2 cut(s)	315, 2125
HhaI	GCGC	3 cut(s)	1082, 1261, 2456
Hin6I	GCGC	3 cut(s)	1080, 1259, 2454
HinP1I	GCGC	3 cut(s)	1080, 1259, 2454
HincII	GTYRAC	1 cut(s)	1915
HindII	GTYRAC	1 cut(s)	1915
HindIII	AAGCTT	2 cut(s)	627, 1210
HpaII	CCGG	2 cut(s)	947, 2459
HphI	GGTGA	6 cut(s)	593, 1655, 1716, 1832, 2195, 2489
Hpy166II	GTNNAC	2 cut(s)	1915, 2561
Hpy188III	TCNNGA	8 cut(s)	116, 122, 947, 1004, 1523, 2334, 2446, 2530
Hpy8I	GTNNAC	2 cut(s)	1915, 2561
Hpy99I	CGWCG	3 cut(s)	331, 1460, 2359
HpyAV	CCTTC	7 cut(s)	24, 578, 1050, 1061, 1117, 1677, 1737
HpyCH4III	ACNGT	6 cut(s)	641, 1091, 1698, 1874, 2527, 2670
HpyCH4IV	ACGT	2 cut(s)	345, 1807
HpySE526I	ACGT	2 cut(s)	345, 1807
HspAI	GCGC	3 cut(s)	1080, 1259, 2454
Kpn2I	TCCGGA	1 cut(s)	946
Kzo9I	GATC	7 cut(s)	112, 118, 195, 438, 814, 871, 903
LmnI	GCTCC	3 cut(s)	169, 775, 829
LweI	GCATC	9 cut(s)	653, 714, 1067, 1126, 1693, 1853, 1917, 2200, 2753
MabI	ACCWGGT	1 cut(s)	1977
MaeI	CTAG	4 cut(s)	1364, 1500, 1515, 2791
MaeII	ACGT	2 cut(s)	345, 1807
MaeIII	GTNAC	5 cut(s)	605, 1091, 1376, 1936, 2062
MalI	GATC	7 cut(s)	114, 120, 197, 440, 816, 873, 905
MbiI	CCGCTC	1 cut(s)	2700
MboI	GATC	7 cut(s)	112, 118, 195, 438, 814, 871, 903
MfeI	CAATTG	1 cut(s)	1783
MhlI	GDGCHC	2 cut(s)	2025, 2759
MlsI	TGGCCA	1 cut(s)	1150
MluNI	TGGCCA	1 cut(s)	1150
MlyI	GAGTC	5 cut(s)	307, 653, 1754, 2566, 2625
MmeI	TCCRAC	4 cut(s)	177, 753, 908, 1717
Mox20I	TGGCCA	1 cut(s)	1150
Mph1103I	ATGCAT	1 cut(s)	1389
MroI	TCCGGA	1 cut(s)	946
MroXI	GAANNNNTTC	5 cut(s)	517, 550, 942, 2378, 2557
MscI	TGGCCA	1 cut(s)	1150
MseI	TTAA	5 cut(s)	318, 1545, 1628, 2006, 2264
Msp20I	TGGCCA	1 cut(s)	1150
MspA1I	CMGCKG	7 cut(s)	230, 578, 1430, 1965, 1971, 2392, 2429
MspI	CCGG	2 cut(s)	947, 2459
MspR9I	CCNGG	4 cut(s)	842, 1818, 1979, 2459
MunI	CAATTG	1 cut(s)	1783
Mva1269I	GAATGC	1 cut(s)	1843
MvaI	CCWGG	3 cut(s)	842, 1818, 1979
MvnI	CGCG	1 cut(s)	692
NciI	CCSGG	1 cut(s)	2459
NcoI	CCATGG	2 cut(s)	39, 2106
NdeI	CATATG	1 cut(s)	2041
NdeII	GATC	7 cut(s)	112, 118, 195, 438, 814, 871, 903
NheI	GCTAGC	1 cut(s)	1363
NlaIV	GGNNCC	3 cut(s)	379, 825, 1899
NmeAIII	GCCGAG	2 cut(s)	469, 748
NmuCI	GTSAC	4 cut(s)	605, 1091, 1936, 2062
NsbI	TGCGCA	1 cut(s)	1081
NsiI	ATGCAT	1 cut(s)	1389
NspI	RCATGY	2 cut(s)	2050, 2763
NspV	TTCGAA	4 cut(s)	491, 743, 1649, 2243
PagI	TCATGA	1 cut(s)	2529
PciI	ACATGT	1 cut(s)	2759
PcsI	WCGNNNNNNNCGW	1 cut(s)	359
PctI	GAATGC	1 cut(s)	1843
PdmI	GAANNNNTTC	5 cut(s)	517, 550, 942, 2378, 2557
PflMI	CCANNNNNTGG	2 cut(s)	1146, 1595
PleI	GAGTC	5 cut(s)	306, 653, 1753, 2566, 2625
PpsI	GAGTC	5 cut(s)	306, 653, 1753, 2566, 2625
PscI	ACATGT	1 cut(s)	2759
Psp124BI	GAGCTC	1 cut(s)	2025
Psp1406I	AACGTT	1 cut(s)	345
Psp6I	CCWGG	3 cut(s)	840, 1816, 1977
PspEI	GGTNACC	1 cut(s)	1376
PspFI	CCCAGC	5 cut(s)	1204, 1304, 2151, 2186, 2765
PspGI	CCWGG	3 cut(s)	840, 1816, 1977
PspN4I	GGNNCC	3 cut(s)	379, 825, 1899
PspPI	GGNCC	6 cut(s)	377, 407, 838, 1220, 2149, 2708
PstI	CTGCAG	1 cut(s)	2397
PstNI	CAGNNNCTG	6 cut(s)	233, 310, 410, 863, 1160, 2377
PvuII	CAGCTG	4 cut(s)	230, 578, 1430, 2392
RsaI	GTAC	1 cut(s)	101
RsaNI	GTAC	1 cut(s)	100
SacI	GAGCTC	1 cut(s)	2025
SaqAI	TTAA	5 cut(s)	318, 1545, 1628, 2006, 2264
Sau3AI	GATC	7 cut(s)	112, 118, 195, 438, 814, 871, 903
Sau96I	GGNCC	6 cut(s)	377, 407, 838, 1220, 2149, 2708
SchI	GAGTC	5 cut(s)	307, 653, 1754, 2566, 2625
ScrFI	CCNGG	4 cut(s)	842, 1818, 1979, 2459
SduI	GDGCHC	2 cut(s)	2025, 2759
SexAI	ACCWGGT	1 cut(s)	1977
SfaNI	GCATC	9 cut(s)	653, 714, 1067, 1126, 1693, 1853, 1917, 2200, 2753
SfcI	CTRYAG	2 cut(s)	411, 2393
SfuI	TTCGAA	4 cut(s)	491, 743, 1649, 2243
SinI	GGWCC	3 cut(s)	377, 838, 1220
SmlI	CTYRAG	3 cut(s)	1614, 2181, 2783
SmoI	CTYRAG	3 cut(s)	1614, 2181, 2783
SspI	AATATT	2 cut(s)	942, 2127
SspMI	CTAG	4 cut(s)	1364, 1500, 1515, 2791
SstI	GAGCTC	1 cut(s)	2025
StyD4I	CCNGG	4 cut(s)	840, 1816, 1977, 2457
StyI	CCWWGG	2 cut(s)	39, 2106
TaaI	ACNGT	6 cut(s)	641, 1091, 1698, 1874, 2527, 2670
TaiI	ACGT	2 cut(s)	348, 1810
TauI	GCSGC	4 cut(s)	172, 175, 1066, 1968
Tru1I	TTAA	5 cut(s)	318, 1545, 1628, 2006, 2264
Tru9I	TTAA	5 cut(s)	318, 1545, 1628, 2006, 2264
TscAI	CASTG	6 cut(s)	193, 1094, 1542, 1596, 1879, 2071
TseFI	GTSAC	4 cut(s)	605, 1091, 1936, 2062
Tsp45I	GTSAC	4 cut(s)	605, 1091, 1936, 2062
TspGWI	ACGGA	2 cut(s)	1444, 2050
TspRI	CASTG	6 cut(s)	193, 1094, 1542, 1596, 1879, 2071
Van91I	CCANNNNNTGG	2 cut(s)	1146, 1595
VpaK11BI	GGWCC	3 cut(s)	377, 838, 1220
XagI	CCTNNNNNAGG	1 cut(s)	2731
XapI	RAATTY	6 cut(s)	253, 478, 1466, 1540, 1888, 2686
XceI	RCATGY	2 cut(s)	2050, 2763
XmnI	GAANNNNTTC	5 cut(s)	517, 550, 942, 2378, 2557
XspI	CTAG	4 cut(s)	1364, 1500, 1515, 2791
Zsp2I	ATGCAT	1 cut(s)	1389

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.