Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0007402

Physical Location & Seq

Genomic Coordinates Reverse (-)

36622212 .. 36624655

Gene Structure 2444 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1287000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 951 bp

ATGAAGTTCTGCAAGACATACCAGGAGTACATGCAAGGCCAGAAGAAGAAGCTGCCCGGAGTCGGATTCAAGAAGCTTAAGAAGATCTTGAAGAAATGCCGCCGAGAAGATTTCCATGACGTCCGTACCTGTCCTGATCACTGCCCAGTGTGTGACGGGAGCTTTTTCCCGGCCCTTCTCAATGAGATGTCTGCAGTGGTGGGTTTCTTCAATAAGCGTGCACAGAAATTGCTTGAACTCCATCTGGCTTCCGGCTTTCGTAAGTACGTGTTTTGGTTCAAAGGCAAAGGTCGAGGGGGCCATGTTGCCTTGATCGAAGAAGGCAAGGACCTCGTGACTTATGCTCTGATCAACGCTGTTGCCATTCGGAAAATACTCAAGAAATATGATAAGATTCATTACTCGACGCAAGGACAGGCCTTCAAGTCGCAAGCTCAAAGCATGCACATTGGACTCCTTCAGAGCCCGTGGCTTTTTGAGCTCATGGCTTTTCACATCAATTTAAGGGAAACCAAGACTAAGTCGAGTAAGACACCGGCTTTGTTTGAGGGATGCTCCCTCAAGATTAATGATGGGAAACCATCTCTCGCCTGTGAGCTCTTTGATTCCGTTAAGCTTGACATCGATTTGACTTGTTCTATATGCTTGGACACGGTGTTTGATCCAGTTGCTCTCGCCTGTGGTCACATATTCTGCTACATGTGTGCTTGCTCGGCCGCATCAGTGAGTATTGTCGATGGATTGAAGTCCGCAGAGCCTAAAGAAAAATGCCCTCTATGCCGAGAGGCAAGAGTTTTCCAAGGCGCTGTGCATTTAGAAGAGCTCAACATGTTACTTAGCAGAAACTGCCGTGAATACTGGGAGCAGAGACTCCAGACCGAGAGGGTAGAGAGGGTTCGGCAAGCAAAGCAGCACTGGGAATTCCAGTGCCGGGCATTCGTTGGCGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002376 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006082 GO:0006464 GO:0006508 GO:0006511 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0008219 GO:0009056 GO:0009057 GO:0009058 GO:0009605 GO:0009607 GO:0009617 GO:0009626 GO:0009627 GO:0009696 GO:0009697 GO:0009719 GO:0009725 GO:0009751 GO:0009814 GO:0009987 GO:0010033 GO:0010035 GO:0010167 GO:0010337 GO:0010498 GO:0010565 GO:0010817 GO:0012501 GO:0014070 GO:0016020 GO:0016053 GO:0016567 GO:0016740 GO:0016999 GO:0017000 GO:0017144 GO:0018958 GO:0019222 GO:0019438 GO:0019538 GO:0019752 GO:0019787 GO:0019941 GO:0030163 GO:0031323 GO:0032350 GO:0032446 GO:0032787 GO:0033554 GO:0034050 GO:0036211 GO:0042221 GO:0042445 GO:0042446 GO:0042493 GO:0042537 GO:0042742 GO:0043161 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044281 GO:0044283 GO:0044424 GO:0044464 GO:0045087 GO:0046189 GO:0046394 GO:0046677 GO:0050789 GO:0050794 GO:0050896 GO:0051603 GO:0051704 GO:0051707 GO:0051716 GO:0061630 GO:0061659 GO:0062012 GO:0065007 GO:0065008 GO:0070647 GO:0071704 GO:0071944 GO:0072330 GO:0080021 GO:0098542 GO:0140096 GO:1901360 GO:1901362 GO:1901564 GO:1901565 GO:1901575 GO:1901576 GO:1901615 GO:1901617 GO:1901698 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-C3HC4 zf-C3HC4_3 zf-RING_UBOX

Protein Analysis

317

Amino Acids

36.07

Weight (kDa)

9.15

Isoelectric Point (pI)

47.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RING_XB3-XBAT31	PF24921	211 - 263	1.1e-07	E3 ubiquitin-protein ligase XB3/XBAT31 RING finger
zf-C3HC4	PF00097	212 - 260	1e-06	Zinc finger, C3HC4 type (RING finger)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007402)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G02860 AT1G02860 AT1G02860
fragaria_vesca	FvH4_2g25590
malus_domestica	MD03G1286900.v1.1 MD03G1287000.v1.1 MD11G1313200.v1.1 MD11G1313600.v1.1
prunus_persica	Prupe.8G260000_v2.0.a1 Prupe.8G260000_v2.0.a1
pyrus_communis	pycom03g22720 pycom11g27230
rosa_chinensis	RchiOBHm_Chr6g0293831
rosa_laevigata	RLG00000011919
rosa_multiflora	Rmu_sc0002596.1_g000009 Rmu_sc0009078.1_g000005
rosa_roxburghii	Rroxscaffold_7G00173870
rosa_rugosa	Rorug06G0238200 Rorug06G0238200 Rorug06G0238200
rosa_samantha	Rh6AG351700 Rh6BG358600 Rh6CG365800 Rh6DG352500
rosa_wichuraiana	Rw6G030600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	123
AciI	CCGC	3 cut(s)	100, 717, 750
AclWI	GGATC	1 cut(s)	656
AcoI	YGGCCR	1 cut(s)	714
AcsI	RAATTY	1 cut(s)	920
AcuI	CTGAAG	1 cut(s)	443
AcyI	GRCGYC	1 cut(s)	120
AfaI	GTAC	3 cut(s)	29, 127, 266
AfiI	CCNNNNNNNGG	2 cut(s)	62, 931
AflII	CTTAAG	1 cut(s)	77
AflIII	ACRYGT	3 cut(s)	267, 699, 828
AgsI	TTSAA	7 cut(s)	70, 91, 211, 236, 280, 424, 745
AjnI	CCWGG	1 cut(s)	21
AluBI	AGCT	8 cut(s)	52, 76, 162, 434, 481, 598, 616, 823
AluI	AGCT	8 cut(s)	52, 76, 162, 434, 481, 598, 616, 823
Alw21I	GWGCWC	4 cut(s)	223, 483, 600, 825
Alw26I	GTCTC	1 cut(s)	862
Alw44I	GTGCAC	1 cut(s)	219
AlwI	GGATC	1 cut(s)	656
AlwNI	CAGNNNCTG	1 cut(s)	846
AoxI	GGCC	5 cut(s)	37, 171, 298, 417, 714
ApaLI	GTGCAC	1 cut(s)	219
ApeKI	GCWGC	2 cut(s)	52, 910
ApoI	RAATTY	1 cut(s)	920
ArsI	GACNNNNNNTTYG	4 cut(s)	523, 555, 641, 673
AseI	ATTAAT	1 cut(s)	567
AspLEI	GCGC	1 cut(s)	806
AspS9I	GGNCC	3 cut(s)	172, 298, 328
AsuC2I	CCSGG	3 cut(s)	57, 170, 932
AvaII	GGWCC	1 cut(s)	328
BaeGI	GKGCMC	1 cut(s)	223
BaeI	ACNNNNGTAYC	2 cut(s)	109, 142
BanII	GRGCYC	4 cut(s)	467, 483, 600, 825
BauI	CACGAG	1 cut(s)	332
Bbv12I	GWGCWC	4 cut(s)	223, 483, 600, 825
BbvI	GCAGC	2 cut(s)	39, 922
BccI	CCATC	4 cut(s)	249, 566, 589, 731
BceAI	ACGGC	1 cut(s)	834
BcgI	CGANNNNNNTGC	2 cut(s)	313, 347
BciT130I	CCWGG	1 cut(s)	23
BclI	TGATCA	2 cut(s)	136, 348
BcnI	CCSGG	3 cut(s)	57, 170, 932
BcoDI	GTCTC	1 cut(s)	862
BfmI	CTRYAG	1 cut(s)	192
BfoI	RGCGCY	1 cut(s)	807
BfrI	CTTAAG	1 cut(s)	77
BglII	AGATCT	1 cut(s)	84
BisI	GCNGC	4 cut(s)	53, 100, 717, 911
BlsI	GCNGC	4 cut(s)	54, 101, 718, 912
Bme1390I	CCNGG	4 cut(s)	23, 57, 170, 932
Bme18I	GGWCC	1 cut(s)	328
BmgT120I	GGNCC	3 cut(s)	172, 298, 328
BmiI	GGNNCC	1 cut(s)	299
BmrFI	CCNGG	4 cut(s)	23, 57, 170, 932
BmrI	ACTGGG	3 cut(s)	140, 868, 925
BmsI	GCATC	2 cut(s)	542, 728
BmuI	ACTGGG	3 cut(s)	140, 868, 925
BplI	GAGNNNNNCTC	2 cut(s)	539, 571
BpmI	CTGGAG	1 cut(s)	857
BpuEI	CTTGAG	2 cut(s)	362, 545
BpuMI	CCSGG	3 cut(s)	57, 170, 932
Bsa29I	ATCGAT	1 cut(s)	624
BsaAI	YACGTR	1 cut(s)	268
BsaHI	GRCGYC	1 cut(s)	120
BsaJI	CCNNGG	2 cut(s)	467, 799
Bsc4I	CCNNNNNNNGG	2 cut(s)	62, 931
Bse118I	RCCGGY	1 cut(s)	535
Bse1I	ACTGG	5 cut(s)	146, 665, 863, 920, 925
BseBI	CCWGG	1 cut(s)	23
BseCI	ATCGAT	1 cut(s)	624
BseDI	CCNNGG	2 cut(s)	467, 799
BseGI	GGATG	1 cut(s)	557
BseLI	CCNNNNNNNGG	2 cut(s)	62, 931
BseNI	ACTGG	5 cut(s)	146, 665, 863, 920, 925
BseSI	GKGCMC	1 cut(s)	223
BseX3I	CGGCCG	1 cut(s)	714
BseXI	GCAGC	2 cut(s)	39, 922
Bsh1285I	CGRYCG	1 cut(s)	717
BshFI	GGCC	5 cut(s)	39, 173, 300, 419, 716
BshVI	ATCGAT	1 cut(s)	624
BsiEI	CGRYCG	1 cut(s)	717
BsiHKAI	GWGCWC	4 cut(s)	223, 483, 600, 825
BsiSI	CCGG	5 cut(s)	57, 170, 252, 536, 931
BslI	CCNNNNNNNGG	2 cut(s)	62, 931
BsmAI	GTCTC	1 cut(s)	862
BsmI	GAATGC	1 cut(s)	935
BsnI	GGCC	5 cut(s)	39, 173, 300, 419, 716
Bsp1286I	GDGCHC	5 cut(s)	223, 467, 483, 600, 825
Bsp143I	GATC	5 cut(s)	84, 136, 312, 348, 661
BspACI	CCGC	3 cut(s)	100, 717, 750
BspANI	GGCC	5 cut(s)	39, 173, 300, 419, 716
BspDI	ATCGAT	1 cut(s)	624
BspLI	GGNNCC	1 cut(s)	299
BspMAI	CTGCAG	1 cut(s)	196
BspPI	GGATC	1 cut(s)	656
BspQI	GCTCTTC	1 cut(s)	813
BspTI	CTTAAG	1 cut(s)	77
BsrFI	RCCGGY	1 cut(s)	535
BsrI	ACTGG	5 cut(s)	146, 665, 863, 920, 925
BssAI	RCCGGY	1 cut(s)	535
BssECI	CCNNGG	2 cut(s)	467, 799
BssMI	GATC	5 cut(s)	84, 136, 312, 348, 661
BssNI	GRCGYC	1 cut(s)	120
BssSI	CACGAG	1 cut(s)	332
BssT1I	CCWWGG	1 cut(s)	799
Bst2BI	CACGAG	1 cut(s)	332
Bst2UI	CCWGG	1 cut(s)	23
Bst4CI	ACNGT	1 cut(s)	655
Bst6I	CTCTTC	1 cut(s)	813
BstACI	GRCGYC	1 cut(s)	120
BstAFI	CTTAAG	1 cut(s)	77
BstAPI	GCANNNNNTGC	1 cut(s)	846
BstBAI	YACGTR	1 cut(s)	268
BstC8I	GCNNGC	5 cut(s)	219, 432, 443, 709, 903
BstDEI	CTNAG	2 cut(s)	519, 836
BstDSI	CCRYGG	1 cut(s)	467
BstF5I	GGATG	1 cut(s)	557
BstH2I	RGCGCY	1 cut(s)	807
BstHHI	GCGC	1 cut(s)	806
BstKTI	GATC	5 cut(s)	87, 139, 315, 351, 664
BstMAI	GTCTC	1 cut(s)	862
BstMBI	GATC	5 cut(s)	84, 136, 312, 348, 661
BstMCI	CGRYCG	1 cut(s)	717
BstMWI	GCNNNNNNNGC	5 cut(s)	478, 713, 777, 846, 907
BstNI	CCWGG	1 cut(s)	23
BstNSI	RCATGY	4 cut(s)	34, 445, 703, 832
BstSCI	CCNGG	4 cut(s)	21, 55, 168, 930
BstSFI	CTRYAG	1 cut(s)	192
BstSLI	GKGCMC	1 cut(s)	223
BstV1I	GCAGC	2 cut(s)	39, 922
BstX2I	RGATCY	1 cut(s)	84
BstYI	RGATCY	1 cut(s)	84
BstZI	CGGCCG	1 cut(s)	714
Bsu15I	ATCGAT	1 cut(s)	624
BsuRI	GGCC	5 cut(s)	39, 173, 300, 419, 716
BsuTUI	ATCGAT	1 cut(s)	624
BtgI	CCRYGG	1 cut(s)	467
BtsCI	GGATG	1 cut(s)	557
BtsI	GCAGTG	2 cut(s)	139, 201
BtsIMutI	CAGTG	6 cut(s)	139, 153, 201, 729, 913, 932
Cac8I	GCNNGC	5 cut(s)	219, 432, 443, 709, 903
CaiI	CAGNNNCTG	1 cut(s)	846
CfoI	GCGC	1 cut(s)	806
Cfr10I	RCCGGY	1 cut(s)	535
Cfr13I	GGNCC	3 cut(s)	172, 298, 328
ClaI	ATCGAT	1 cut(s)	624
CseI	GACGC	1 cut(s)	415
Csp6I	GTAC	3 cut(s)	28, 126, 265
CviAII	CATG	7 cut(s)	31, 116, 302, 442, 484, 700, 829
CviQI	GTAC	3 cut(s)	28, 126, 265
DdeI	CTNAG	2 cut(s)	519, 836
DpnI	GATC	5 cut(s)	86, 138, 314, 350, 663
DpnII	GATC	5 cut(s)	84, 136, 312, 348, 661
EaeI	YGGCCR	1 cut(s)	714
EagI	CGGCCG	1 cut(s)	714
Eam1104I	CTCTTC	1 cut(s)	813
EarI	CTCTTC	1 cut(s)	813
Ecl136II	GAGCTC	3 cut(s)	481, 598, 823
EclXI	CGGCCG	1 cut(s)	714
Eco130I	CCWWGG	1 cut(s)	799
Eco147I	AGGCCT	1 cut(s)	419
Eco24I	GRGCYC	4 cut(s)	467, 483, 600, 825
Eco47I	GGWCC	1 cut(s)	328
Eco52I	CGGCCG	1 cut(s)	714
Eco53kI	GAGCTC	3 cut(s)	481, 598, 823
Eco57I	CTGAAG	1 cut(s)	443
EcoICRI	GAGCTC	3 cut(s)	481, 598, 823
EcoO109I	RGGNCCY	1 cut(s)	328
EcoRI	GAATTC	1 cut(s)	920
EcoRII	CCWGG	1 cut(s)	21
EcoT14I	CCWWGG	1 cut(s)	799
EcoT38I	GRGCYC	4 cut(s)	467, 483, 600, 825
ErhI	CCWWGG	1 cut(s)	799
FaeI	CATG	7 cut(s)	34, 119, 305, 445, 487, 703, 832
FalI	AAGNNNNNCTT	2 cut(s)	71, 103
FatI	CATG	7 cut(s)	30, 115, 301, 441, 483, 699, 828
FbaI	TGATCA	2 cut(s)	136, 348
Fnu4HI	GCNGC	4 cut(s)	53, 100, 717, 911
FokI	GGATG	1 cut(s)	564
FriOI	GRGCYC	4 cut(s)	467, 483, 600, 825
Fsp4HI	GCNGC	4 cut(s)	53, 100, 717, 911
GlaI	GCGC	1 cut(s)	805
GluI	GCNGC	4 cut(s)	53, 100, 717, 911
GsuI	CTGGAG	1 cut(s)	857
HaeII	RGCGCY	1 cut(s)	807
HaeIII	GGCC	5 cut(s)	39, 173, 300, 419, 716
HapII	CCGG	5 cut(s)	57, 170, 252, 536, 931
HgaI	GACGC	1 cut(s)	415
HhaI	GCGC	1 cut(s)	806
Hin1I	GRCGYC	1 cut(s)	120
Hin1II	CATG	7 cut(s)	34, 119, 305, 445, 487, 703, 832
Hin6I	GCGC	1 cut(s)	804
HinP1I	GCGC	1 cut(s)	804
HindIII	AAGCTT	2 cut(s)	74, 614
HinfI	GANTC	6 cut(s)	60, 66, 394, 453, 605, 870
HpaII	CCGG	5 cut(s)	57, 170, 252, 536, 931
Hpy166II	GTNNAC	1 cut(s)	221
Hpy188I	TCNGA	4 cut(s)	65, 348, 369, 462
Hpy188III	TCNNGA	7 cut(s)	70, 88, 134, 334, 379, 562, 874
Hpy8I	GTNNAC	1 cut(s)	221
Hpy99I	CGWCG	1 cut(s)	409
HpyAV	CCTTC	4 cut(s)	185, 314, 430, 467
HpyCH4III	ACNGT	1 cut(s)	655
HpyCH4IV	ACGT	2 cut(s)	120, 267
HpyCH4V	TGCA	6 cut(s)	12, 34, 194, 221, 445, 811
HpyF10VI	GCNNNNNNNGC	5 cut(s)	478, 713, 777, 846, 907
HpyF3I	CTNAG	2 cut(s)	519, 836
HpySE526I	ACGT	2 cut(s)	120, 267
Hsp92I	GRCGYC	1 cut(s)	120
Hsp92II	CATG	7 cut(s)	34, 119, 305, 445, 487, 703, 832
HspAI	GCGC	1 cut(s)	804
Ksp22I	TGATCA	2 cut(s)	136, 348
Kzo9I	GATC	5 cut(s)	84, 136, 312, 348, 661
LguI	GCTCTTC	1 cut(s)	813
LmnI	GCTCC	3 cut(s)	159, 560, 862
Lsp1109I	GCAGC	2 cut(s)	39, 922
LweI	GCATC	2 cut(s)	542, 728
MaeII	ACGT	2 cut(s)	120, 267
MaeIII	GTNAC	4 cut(s)	152, 334, 683, 831
MalI	GATC	5 cut(s)	86, 138, 314, 350, 663
MboI	GATC	5 cut(s)	84, 136, 312, 348, 661
MboII	GAAGA	8 cut(s)	55, 58, 94, 103, 119, 199, 329, 830
MflI	RGATCY	1 cut(s)	84
MhlI	GDGCHC	5 cut(s)	223, 467, 483, 600, 825
MluCI	AATT	3 cut(s)	227, 499, 920
MlyI	GAGTC	3 cut(s)	69, 447, 864
MmeI	TCCRAC	1 cut(s)	43
MnlI	CCTC	8 cut(s)	287, 341, 541, 569, 778, 783, 876, 885
MseI	TTAA	4 cut(s)	78, 503, 567, 612
MspCI	CTTAAG	1 cut(s)	77
MspI	CCGG	5 cut(s)	57, 170, 252, 536, 931
MspR9I	CCNGG	4 cut(s)	23, 57, 170, 932
Mva1269I	GAATGC	1 cut(s)	935
MvaI	CCWGG	1 cut(s)	23
MwoI	GCNNNNNNNGC	5 cut(s)	478, 713, 777, 846, 907
NciI	CCSGG	3 cut(s)	57, 170, 932
NdeII	GATC	5 cut(s)	84, 136, 312, 348, 661
NlaIII	CATG	7 cut(s)	34, 119, 305, 445, 487, 703, 832
NlaIV	GGNNCC	1 cut(s)	299
NmeAIII	GCCGAG	3 cut(s)	128, 692, 806
NmuCI	GTSAC	3 cut(s)	152, 334, 683
NspI	RCATGY	4 cut(s)	34, 445, 703, 832
PaeI	GCATGC	1 cut(s)	445
PceI	AGGCCT	1 cut(s)	419
PciI	ACATGT	2 cut(s)	699, 828
PciSI	GCTCTTC	1 cut(s)	813
PctI	GAATGC	1 cut(s)	935
PfeI	GAWTC	3 cut(s)	66, 394, 605
PflFI	GACNNNGTC	1 cut(s)	520
PkrI	GCNGC	4 cut(s)	54, 101, 718, 912
PleI	GAGTC	3 cut(s)	68, 447, 864
PpsI	GAGTC	3 cut(s)	68, 447, 864
Ppu21I	YACGTR	1 cut(s)	268
PpuMI	RGGWCCY	1 cut(s)	328
PscI	ACATGT	2 cut(s)	699, 828
PshBI	ATTAAT	1 cut(s)	567
Psp124BI	GAGCTC	3 cut(s)	483, 600, 825
Psp5II	RGGWCCY	1 cut(s)	328
Psp6I	CCWGG	1 cut(s)	21
PspGI	CCWGG	1 cut(s)	21
PspN4I	GGNNCC	1 cut(s)	299
PspPI	GGNCC	3 cut(s)	172, 298, 328
PspPPI	RGGWCCY	1 cut(s)	328
PsrI	GAACNNNNNNTAC	2 cut(s)	879, 911
PstI	CTGCAG	1 cut(s)	196
PstNI	CAGNNNCTG	1 cut(s)	846
PsuI	RGATCY	1 cut(s)	84
PsyI	GACNNNGTC	1 cut(s)	520
RsaI	GTAC	3 cut(s)	29, 127, 266
RsaNI	GTAC	3 cut(s)	28, 126, 265
SacI	GAGCTC	3 cut(s)	483, 600, 825
SapI	GCTCTTC	1 cut(s)	813
SaqAI	TTAA	4 cut(s)	78, 503, 567, 612
SatI	GCNGC	4 cut(s)	53, 100, 717, 911
Sau3AI	GATC	5 cut(s)	84, 136, 312, 348, 661
Sau96I	GGNCC	3 cut(s)	172, 298, 328
SchI	GAGTC	3 cut(s)	69, 447, 864
ScrFI	CCNGG	4 cut(s)	23, 57, 170, 932
SduI	GDGCHC	5 cut(s)	223, 467, 483, 600, 825
SfaNI	GCATC	2 cut(s)	542, 728
SfcI	CTRYAG	1 cut(s)	192
SinI	GGWCC	1 cut(s)	328
SmlI	CTYRAG	3 cut(s)	77, 377, 560
SmoI	CTYRAG	3 cut(s)	77, 377, 560
SphI	GCATGC	1 cut(s)	445
Sse9I	AATT	3 cut(s)	227, 499, 920
SseBI	AGGCCT	1 cut(s)	419
SsiI	CCGC	3 cut(s)	100, 717, 750
SstI	GAGCTC	3 cut(s)	483, 600, 825
StuI	AGGCCT	1 cut(s)	419
StyD4I	CCNGG	4 cut(s)	21, 55, 168, 930
StyI	CCWWGG	1 cut(s)	799
TaaI	ACNGT	1 cut(s)	655
TaiI	ACGT	2 cut(s)	123, 270
TaqI	TCGA	6 cut(s)	292, 315, 404, 524, 624, 735
TaqII	GACCGA	1 cut(s)	893
TasI	AATT	3 cut(s)	227, 499, 920
TatI	WGTACW	1 cut(s)	27
TauI	GCSGC	2 cut(s)	102, 719
TfiI	GAWTC	3 cut(s)	66, 394, 605
Tru1I	TTAA	4 cut(s)	78, 503, 567, 612
Tru9I	TTAA	4 cut(s)	78, 503, 567, 612
TscAI	CASTG	6 cut(s)	146, 153, 201, 729, 920, 932
TseFI	GTSAC	3 cut(s)	152, 334, 683
TseI	GCWGC	2 cut(s)	52, 910
Tsp45I	GTSAC	3 cut(s)	152, 334, 683
TspDTI	ATGAA	2 cut(s)	17, 386
TspGWI	ACGGA	2 cut(s)	113, 598
TspRI	CASTG	6 cut(s)	146, 153, 201, 729, 920, 932
Tth111I	GACNNNGTC	1 cut(s)	520
Vha464I	CTTAAG	1 cut(s)	77
VneI	GTGCAC	1 cut(s)	219
VpaK11BI	GGWCC	1 cut(s)	328
VspI	ATTAAT	1 cut(s)	567
XapI	RAATTY	1 cut(s)	920
XceI	RCATGY	4 cut(s)	34, 445, 703, 832
ZraI	GACGTC	1 cut(s)	121

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.