Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0007962

Physical Location & Seq

Genomic Coordinates Reverse (-)

36734905 .. 36739888

Gene Structure 4984 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1288900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2205 bp

ATGCTGCACGAGTTGCTCCTCGCGCTGCTGGGCTACACCGGCGATCTGATAATCGACGACAGAGAGCACTCCAAGTCGCTTGGAATCGACGCTCCGATTTCCTCCTCGCCGACTTTCAAGCTCGCTTCCGACATCTCTTTCATCCAACCCAGCGAAAGGGATCTGATAGAGAAGATCATCACATTAGGGTTTTACTACAGGGAGCTCGACCGCTTCTCCGTCAGGTGCCGGAATTTGAGCTGGATTAGGTCTGCAAATGCCAGTCCTGCGGCGTCCGATACCGAAAAGCCTAGTGTTTACCGGAGGGCCATTGCCAATGGCATTGTGGAGATACTGTCCGTTTATCGGTCCGCCGTGCTCCACATTGAGCAGAAACTGTTGGCGGACTCCGTCCCCATACTGGCAACCGTCACTCAAGGACTCAACAAGTTTTTTGTGCTTTTGCCGCCGTTGTATGAGCTCGTTCTGGAGATTGAGCGGGATGACATTCGCGGTGGTAAGCTTCTTAACCTTTTGCACAAAAGATGCCATTGTGGGGTTCCCGAGTTGCAGACGTGCATTCAAAGGCTTCTTTGGCATGCACATCAGGTCATGTACAACCAGCTTGCAGCGTGGGTGGTGTACGGGATTCTTCAAGATCAGCATGGCGAGTTTTTCATTAGGAGGCAGGAAGATAAGGATGTAGGGCATGGCTCATCACATCCAGACATATCTGAAAAGTTGGCACGGATGTCAACGGAAGATACATCTTTAACAGATTGGCACTTGGGATTTCATATTTATCTGGATATGCTGCCCGAGTATATCCATATGCGTGTTGCAGAATCAATTTTATTTTCTGGGAAAGCCATCAGTGTTCTTCGCAATCCTAGCCATGCCTTTCGGTTCCAGGACATTGTATATCCTCAACAGGTGGCTAAGGGCTCTCAGAAAGTTCAAGGATTTTCAGGACGATTTCCTTTCCTCGAAGACCCTTTTGCGGATAAAGAATTGATTGGAGAAGAATTGCTTCCACAGTCTGAGGCTGATAAGATTGAAACTATGCTTCTGGAACTAAAGGAATCATCTGAGTTTCACAAAAGATCTTTTGAATGTGCTGTTGATTCAATTAGGGCTATTGCTGCCAGTCATCTTTGGCAGCTTGTGGTTGTACGCGCTGACTTAAATGGCCATCTGAAGGCACTGAAAGACTATTTTCTTTTAGCAAAAGGAGATTTCTTTCAGTGCTTTCTTGAAGAGAGTCGCCAGTTGATGCGCTTACCTCCTCGCCAATCAACTGCGGAGGCTGACCTTATGGTCCCGTTTCAGCTGGCTGCAATTAAGACTATATGTGAGGAAGACAAGTATTTCTCAAGAGTATCCTTGAGGATGCCTTCATTTGGAATGACAGTAAGATCCTCCCAAGGAGATTTACCAAAGGCAGACGGGAATTCAGGCCCAAGTGCTTCCTCAGAAATCTCTCTTGACGGTTGGGATGGAATTGCTCTTGAATACTCTGTTGATTGGCCCTTACAGTTGTTCTTTACTCCGGATGTGCTCTCTAAGTACTGCAGGGTCTTCCAATATCTACTGAGGCTTAAGCGTACACAAATGGAATTGGAGAAATCATGGGCCTCTGTGATGCAACAAGATCACACAGATTTTGCCAAACATCGGAATGATCATGAAAAGTGCTCAGTATCTCAGCAGCGAAGGCAGCGATCTAGACCAATGTGGCGTATTAGAGAGCACATGGCTTTCTTGATTAGAAATCTTCAATTTTATATACAGGTGGATGTCATAGAATCCCAATGGAATGTTTTGCAAGAGCATATCCAAGATTCTCATGACTTTACTGGACTTGTGGCCGTCCATCAGGAGTATTTATCAGCTTTAATTTCACAATCTTTCTTGGACATTGGCTCCTTATCGAGGATTCTGGACAGCATAATGAAACTTTGCCTTCAGTTCTGCTGGAACATCGAGAACCAAGAAAGCAGTGCAAATACATCTGAATTGGAACACATTATAGAGGAATTTAACAAGAAATCAAACTCCCTATACACGATCTTGCGCAGTAGTAGGCTTGTTGGGAGCCAGCGAGCCCCATTTCTGAGGCGGTTTCTGATGCGTCTCAACTTCAACTCCTTCTTTGAGGCAACAGCTAGAGGCGTGCTGAATGTTGTCAGACCGCGGCCTACACTTTCTGTCTTGAATCAACAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000226 GO:0000278 GO:0000280 GO:0000923 GO:0000930 GO:0003674 GO:0005198 GO:0005200 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005815 GO:0005819 GO:0005856 GO:0005911 GO:0006996 GO:0007010 GO:0007017 GO:0007020 GO:0007049 GO:0007051 GO:0007052 GO:0008092 GO:0008150 GO:0009506 GO:0009605 GO:0009607 GO:0009624 GO:0009987 GO:0015630 GO:0015631 GO:0016043 GO:0022402 GO:0022414 GO:0022607 GO:0030054 GO:0030865 GO:0031109 GO:0031122 GO:0032153 GO:0032155 GO:0032991 GO:0034622 GO:0040007 GO:0043015 GO:0043207 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043622 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044450 GO:0044464 GO:0046785 GO:0048285 GO:0050896 GO:0051225 GO:0051258 GO:0051321 GO:0051415 GO:0051418 GO:0051704 GO:0051707 GO:0055044 GO:0065003 GO:0070925 GO:0071840 GO:0090307 GO:0097435 GO:0140014 GO:1902850 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Spc97_Spc98

Protein Analysis

735

Amino Acids

84.37

Weight (kDa)

6.29

Isoelectric Point (pI)

55.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GCP_N_terminal	PF17681	2 - 383	2e-45	Gamma tubulin complex component N-terminal
GCP_C_terminal	PF04130	388 - 711	2.8e-59	Gamma tubulin complex component C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007962)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53760 AT3G53760 AT3G53760
fragaria_vesca	FvH4_2g25810 FvH4_2g25810 FvH4_2g25810 FvH4_2g25810 FvH4_2g25810
malus_domestica	MD03G1288900.v1.1
prunus_persica	Prupe.8G262200_v2.0.a1 Prupe.8G262200_v2.0.a1
pyrus_communis	pycom03g22900 pycom11g27030
rosa_chinensis	RchiOBHm_Chr6g0294121
rosa_laevigata	RLG00000011897
rosa_multiflora	Rmu_sc0005037.1_g000009
rosa_roxburghii	Rroxscaffold_7G00173630
rosa_rugosa	Rorug06G0241400 Rorug06G0241500 Rorug06G0241600 Rorug06G0241700
rosa_samantha	Rh6AG354000 Rh6DG354800
rosa_wichuraiana	Rw6G030850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1295
Acc16I	TGCGCA	1 cut(s)	2054
AccB1I	GGYRCC	1 cut(s)	225
AccBSI	CCGCTC	1 cut(s)	478
AccII	CGCG	4 cut(s)	23, 492, 1155, 2173
AccIII	TCCGGA	1 cut(s)	1528
AclWI	GGATC	2 cut(s)	168, 1389
AcoI	YGGCCR	2 cut(s)	1168, 1845
AcsI	RAATTY	3 cut(s)	232, 1429, 2015
AcuI	CTGAAG	2 cut(s)	1196, 1928
AcyI	GRCGYC	1 cut(s)	272
AfaI	GTAC	5 cut(s)	596, 623, 1152, 1547, 1585
AfiI	CCNNNNNNNGG	9 cut(s)	156, 345, 400, 535, 979, 1177, 1379, 1653, 1911
AflII	CTTAAG	1 cut(s)	1577
AjiI	CACGTC	1 cut(s)	555
AjnI	CCWGG	1 cut(s)	888
Alw21I	GWGCWC	7 cut(s)	69, 207, 360, 462, 1539, 1676, 1731
Alw26I	GTCTC	1 cut(s)	2117
AlwI	GGATC	2 cut(s)	168, 1389
AlwNI	CAGNNNCTG	1 cut(s)	376
Ama87I	CYCGRG	2 cut(s)	542, 797
Aor13HI	TCCGGA	1 cut(s)	1528
AoxI	GGCC	7 cut(s)	306, 1168, 1435, 1505, 1611, 1845, 2174
ApeKI	GCWGC	9 cut(s)	4, 25, 608, 793, 1121, 1138, 1313, 1687, 1696
ApoI	RAATTY	3 cut(s)	232, 1429, 2015
Asp700I	GAANNNNTTC	1 cut(s)	1008
AspLEI	GCGC	4 cut(s)	25, 1157, 1257, 2055
AspS9I	GGNCC	6 cut(s)	306, 348, 1297, 1436, 1506, 1611
AvaI	CYCGRG	2 cut(s)	542, 797
AvaII	GGWCC	2 cut(s)	348, 1297
BalI	TGGCCA	1 cut(s)	1170
BanI	GGYRCC	1 cut(s)	225
BanII	GRGCYC	4 cut(s)	207, 462, 926, 2086
BauI	CACGAG	1 cut(s)	8
BbsI	GAAGAC	3 cut(s)	975, 1344, 1549
Bbv12I	GWGCWC	7 cut(s)	69, 207, 360, 462, 1539, 1676, 1731
BbvI	GCAGC	8 cut(s)	12, 620, 780, 1108, 1150, 1300, 1699, 1708
BccI	CCATC	4 cut(s)	857, 1179, 1469, 1860
BceAI	ACGGC	3 cut(s)	338, 433, 1832
BciT130I	CCWGG	1 cut(s)	890
BciVI	GTATCC	1 cut(s)	1369
BclI	TGATCA	1 cut(s)	1660
BcoDI	GTCTC	1 cut(s)	2117
BfaI	CTAG	4 cut(s)	291, 870, 1704, 2145
BfmI	CTRYAG	2 cut(s)	196, 1549
BfrI	CTTAAG	1 cut(s)	1577
BfuI	GTATCC	1 cut(s)	1369
BglII	AGATCT	1 cut(s)	1082
BmcAI	AGTACT	1 cut(s)	1547
Bme1390I	CCNGG	1 cut(s)	890
Bme18I	GGWCC	2 cut(s)	348, 1297
BmeT110I	CYCGRG	2 cut(s)	542, 797
BmgBI	CACGTC	1 cut(s)	555
BmgT120I	GGNCC	6 cut(s)	306, 348, 1297, 1436, 1506, 1611
BmiI	GGNNCC	6 cut(s)	227, 540, 887, 1299, 1903, 2075
BmrFI	CCNGG	1 cut(s)	890
BmsI	GCATC	5 cut(s)	515, 1242, 1359, 1611, 2097
BpiI	GAAGAC	3 cut(s)	975, 1344, 1549
BpmI	CTGGAG	1 cut(s)	488
Bpu10I	CCTNAGC	1 cut(s)	918
BpuEI	CTTGAG	3 cut(s)	399, 1336, 1384
BsaHI	GRCGYC	1 cut(s)	272
BsaJI	CCNNGG	2 cut(s)	1402, 2171
BsaWI	WCCGGW	2 cut(s)	300, 1528
BsaXI	ACNNNNNCTCC	8 cut(s)	200, 230, 320, 350, 1886, 1916, 2108, 2138
Bsc4I	CCNNNNNNNGG	9 cut(s)	156, 345, 400, 535, 979, 1177, 1379, 1653, 1911
Bse118I	RCCGGY	1 cut(s)	38
Bse1I	ACTGG	5 cut(s)	261, 405, 1125, 1246, 1840
Bse3DI	GCAATG	1 cut(s)	309
BseAI	TCCGGA	1 cut(s)	1528
BseBI	CCWGG	1 cut(s)	890
BseDI	CCNNGG	2 cut(s)	1402, 2171
BseGI	GGATG	9 cut(s)	141, 487, 685, 700, 735, 1374, 1480, 1537, 1780
BseLI	CCNNNNNNNGG	9 cut(s)	156, 345, 400, 535, 979, 1177, 1379, 1653, 1911
BseMI	GCAATG	1 cut(s)	309
BseMII	CTCAG	8 cut(s)	941, 1011, 1059, 1464, 1562, 1689, 1697, 2084
BseNI	ACTGG	5 cut(s)	261, 405, 1125, 1246, 1840
BseRI	GAGGAG	3 cut(s)	8, 94, 1254
BseXI	GCAGC	8 cut(s)	12, 620, 780, 1108, 1150, 1300, 1699, 1708
BseYI	CCCAGC	2 cut(s)	28, 149
Bsh1236I	CGCG	4 cut(s)	23, 492, 1155, 2173
Bsh1285I	CGRYCG	1 cut(s)	211
BshFI	GGCC	7 cut(s)	308, 1170, 1437, 1507, 1613, 1847, 2176
BshNI	GGYRCC	1 cut(s)	225
BsiEI	CGRYCG	1 cut(s)	211
BsiHKAI	GWGCWC	7 cut(s)	69, 207, 360, 462, 1539, 1676, 1731
BsiHKCI	CYCGRG	2 cut(s)	542, 797
BsiSI	CCGG	4 cut(s)	39, 229, 301, 1529
BslFI	GGGAC	2 cut(s)	377, 1283
BslI	CCNNNNNNNGG	9 cut(s)	156, 345, 400, 535, 979, 1177, 1379, 1653, 1911
BsmAI	GTCTC	1 cut(s)	2117
BsmBI	CGTCTC	1 cut(s)	2117
BsmFI	GGGAC	2 cut(s)	377, 1283
BsmI	GAATGC	1 cut(s)	558
BsnI	GGCC	7 cut(s)	308, 1170, 1437, 1507, 1613, 1847, 2176
BsoBI	CYCGRG	2 cut(s)	542, 797
Bsp1286I	GDGCHC	9 cut(s)	69, 207, 360, 462, 926, 1539, 1676, 1731, 2086
Bsp13I	TCCGGA	1 cut(s)	1528
Bsp1407I	TGTACA	1 cut(s)	594
BspANI	GGCC	7 cut(s)	308, 1170, 1437, 1507, 1613, 1847, 2176
BspCNI	CTCAG	8 cut(s)	940, 1012, 1060, 1463, 1563, 1688, 1696, 2085
BspEI	TCCGGA	1 cut(s)	1528
BspFNI	CGCG	4 cut(s)	23, 492, 1155, 2173
BspHI	TCATGA	2 cut(s)	1663, 1825
BspLI	GGNNCC	6 cut(s)	227, 540, 887, 1299, 1903, 2075
BspMAI	CTGCAG	1 cut(s)	1553
BspPI	GGATC	2 cut(s)	168, 1389
BspT107I	GGYRCC	1 cut(s)	225
BspTI	CTTAAG	1 cut(s)	1577
BsrBI	CCGCTC	1 cut(s)	478
BsrDI	GCAATG	1 cut(s)	309
BsrFI	RCCGGY	1 cut(s)	38
BsrGI	TGTACA	1 cut(s)	594
BsrI	ACTGG	5 cut(s)	261, 405, 1125, 1246, 1840
BssAI	RCCGGY	1 cut(s)	38
BssECI	CCNNGG	2 cut(s)	1402, 2171
BssNI	GRCGYC	1 cut(s)	272
BssSI	CACGAG	1 cut(s)	8
BssT1I	CCWWGG	1 cut(s)	1402
Bst2BI	CACGAG	1 cut(s)	8
Bst2UI	CCWGG	1 cut(s)	890
Bst4CI	ACNGT	8 cut(s)	336, 378, 409, 1017, 1390, 1469, 1515, 2202
Bst6I	CTCTTC	1 cut(s)	1230
BstACI	GRCGYC	1 cut(s)	272
BstAFI	CTTAAG	1 cut(s)	1577
BstAPI	GCANNNNNTGC	1 cut(s)	13
BstAUI	TGTACA	1 cut(s)	594
BstC8I	GCNNGC	7 cut(s)	123, 579, 606, 1311, 2078, 2082, 2153
BstDSI	CCRYGG	1 cut(s)	2171
BstENI	CCTNNNNNAGG	1 cut(s)	1909
BstF5I	GGATG	9 cut(s)	141, 487, 685, 700, 735, 1374, 1480, 1537, 1780
BstFNI	CGCG	4 cut(s)	23, 492, 1155, 2173
BstHHI	GCGC	4 cut(s)	25, 1157, 1257, 2055
BstMAI	GTCTC	1 cut(s)	2117
BstMCI	CGRYCG	1 cut(s)	211
BstNI	CCWGG	1 cut(s)	890
BstNSI	RCATGY	1 cut(s)	581
BstSCI	CCNGG	1 cut(s)	888
BstSFI	CTRYAG	2 cut(s)	196, 1549
BstUI	CGCG	4 cut(s)	23, 492, 1155, 2173
BstV1I	GCAGC	8 cut(s)	12, 620, 780, 1108, 1150, 1300, 1699, 1708
BstV2I	GAAGAC	3 cut(s)	975, 1344, 1549
BstX2I	RGATCY	3 cut(s)	160, 1082, 1394
BstYI	RGATCY	3 cut(s)	160, 1082, 1394
BsuI	GTATCC	1 cut(s)	1369
BsuRI	GGCC	7 cut(s)	308, 1170, 1437, 1507, 1613, 1847, 2176
BtgI	CCRYGG	1 cut(s)	2171
BtrI	CACGTC	1 cut(s)	555
BtsCI	GGATG	9 cut(s)	141, 487, 685, 700, 735, 1374, 1480, 1537, 1780
BtsI	GCAGTG	1 cut(s)	1984
BtsIMutI	CAGTG	4 cut(s)	859, 1181, 1229, 1984
Cac8I	GCNNGC	7 cut(s)	123, 579, 606, 1311, 2078, 2082, 2153
CaiI	CAGNNNCTG	1 cut(s)	376
CciI	TCATGA	2 cut(s)	1663, 1825
CfoI	GCGC	4 cut(s)	25, 1157, 1257, 2055
Cfr10I	RCCGGY	1 cut(s)	38
Cfr13I	GGNCC	6 cut(s)	306, 348, 1297, 1436, 1506, 1611
Cfr42I	CCGCGG	1 cut(s)	2174
CpoI	CGGWCCG	1 cut(s)	348
CseI	GACGC	3 cut(s)	98, 261, 2099
Csp6I	GTAC	5 cut(s)	595, 622, 1151, 1546, 1584
CspI	CGGWCCG	1 cut(s)	348
CviAII	CATG	9 cut(s)	578, 592, 644, 689, 875, 1608, 1664, 1732, 1826
CviQI	GTAC	5 cut(s)	595, 622, 1151, 1546, 1584
DrdI	GACNNNNNNGTC	1 cut(s)	1295
DseDI	GACNNNNNNGTC	1 cut(s)	1295
EaeI	YGGCCR	2 cut(s)	1168, 1845
Eam1104I	CTCTTC	1 cut(s)	1230
EarI	CTCTTC	1 cut(s)	1230
EciI	GGCGGA	2 cut(s)	340, 398
Ecl136II	GAGCTC	2 cut(s)	205, 460
Eco130I	CCWWGG	1 cut(s)	1402
Eco24I	GRGCYC	4 cut(s)	207, 462, 926, 2086
Eco47I	GGWCC	2 cut(s)	348, 1297
Eco53kI	GAGCTC	2 cut(s)	205, 460
Eco57I	CTGAAG	2 cut(s)	1196, 1928
Eco88I	CYCGRG	2 cut(s)	542, 797
EcoICRI	GAGCTC	2 cut(s)	205, 460
EcoNI	CCTNNNNNAGG	1 cut(s)	1909
EcoRI	GAATTC	1 cut(s)	1429
EcoRII	CCWGG	1 cut(s)	888
EcoT14I	CCWWGG	1 cut(s)	1402
EcoT38I	GRGCYC	4 cut(s)	207, 462, 926, 2086
ErhI	CCWWGG	1 cut(s)	1402
Esp3I	CGTCTC	1 cut(s)	2117
FaeI	CATG	9 cut(s)	581, 595, 647, 692, 878, 1611, 1667, 1735, 1829
FalI	AAGNNNNNCTT	2 cut(s)	993, 1025
FaqI	GGGAC	2 cut(s)	377, 1283
FatI	CATG	9 cut(s)	577, 591, 643, 688, 874, 1607, 1663, 1731, 1825
FauI	CCCGC	1 cut(s)	471
FauNDI	CATATG	1 cut(s)	810
FbaI	TGATCA	1 cut(s)	1660
FokI	GGATG	9 cut(s)	128, 494, 687, 692, 742, 1381, 1487, 1544, 1787
FriOI	GRGCYC	4 cut(s)	207, 462, 926, 2086
FspBI	CTAG	4 cut(s)	291, 870, 1704, 2145
FspI	TGCGCA	1 cut(s)	2054
GlaI	GCGC	4 cut(s)	24, 1156, 1256, 2054
GsaI	CCCAGC	2 cut(s)	32, 153
GsuI	CTGGAG	1 cut(s)	488
HaeIII	GGCC	7 cut(s)	308, 1170, 1437, 1507, 1613, 1847, 2176
HapII	CCGG	4 cut(s)	39, 229, 301, 1529
HgaI	GACGC	3 cut(s)	98, 261, 2099
HhaI	GCGC	4 cut(s)	25, 1157, 1257, 2055
Hin1I	GRCGYC	1 cut(s)	272
Hin1II	CATG	9 cut(s)	581, 595, 647, 692, 878, 1611, 1667, 1735, 1829
Hin6I	GCGC	4 cut(s)	23, 1155, 1255, 2053
HinP1I	GCGC	4 cut(s)	23, 1155, 1255, 2053
HincII	GTYRAC	1 cut(s)	735
HindII	GTYRAC	1 cut(s)	735
HindIII	AAGCTT	1 cut(s)	500
HpaII	CCGG	4 cut(s)	39, 229, 301, 1529
Hpy166II	GTNNAC	4 cut(s)	298, 622, 735, 1586
Hpy8I	GTNNAC	4 cut(s)	298, 622, 735, 1586
Hpy99I	CGWCG	2 cut(s)	59, 92
HpyAV	CCTTC	5 cut(s)	1171, 1383, 1686, 1952, 2137
HpyCH4III	ACNGT	8 cut(s)	336, 378, 409, 1017, 1390, 1469, 1515, 2202
HpyCH4IV	ACGT	1 cut(s)	554
HpySE526I	ACGT	1 cut(s)	554
Hsp92I	GRCGYC	1 cut(s)	272
Hsp92II	CATG	9 cut(s)	581, 595, 647, 692, 878, 1611, 1667, 1735, 1829
HspAI	GCGC	4 cut(s)	23, 1155, 1255, 2053
Kpn2I	TCCGGA	1 cut(s)	1528
Ksp22I	TGATCA	1 cut(s)	1660
KspI	CCGCGG	1 cut(s)	2174
LmnI	GCTCC	6 cut(s)	21, 97, 202, 363, 1907, 2073
Lsp1109I	GCAGC	8 cut(s)	12, 620, 780, 1108, 1150, 1300, 1699, 1708
LweI	GCATC	5 cut(s)	515, 1242, 1359, 1611, 2097
MaeI	CTAG	4 cut(s)	291, 870, 1704, 2145
MaeII	ACGT	1 cut(s)	554
MaeIII	GTNAC	1 cut(s)	409
MbiI	CCGCTC	1 cut(s)	478
MflI	RGATCY	3 cut(s)	160, 1082, 1394
MhlI	GDGCHC	9 cut(s)	69, 207, 360, 462, 926, 1539, 1676, 1731, 2086
MlsI	TGGCCA	1 cut(s)	1170
MluNI	TGGCCA	1 cut(s)	1170
MlyI	GAGTC	3 cut(s)	380, 414, 1249
MmeI	TCCRAC	2 cut(s)	153, 169
Mox20I	TGGCCA	1 cut(s)	1170
MroI	TCCGGA	1 cut(s)	1528
MroXI	GAANNNNTTC	1 cut(s)	1008
MscI	TGGCCA	1 cut(s)	1170
MseI	TTAA	7 cut(s)	507, 752, 1163, 1320, 1578, 1874, 2019
MslI	CAYNNNNRTG	2 cut(s)	813, 1656
Msp20I	TGGCCA	1 cut(s)	1170
MspA1I	CMGCKG	2 cut(s)	1309, 2173
MspCI	CTTAAG	1 cut(s)	1577
MspI	CCGG	4 cut(s)	39, 229, 301, 1529
MspR9I	CCNGG	1 cut(s)	890
Mva1269I	GAATGC	1 cut(s)	558
MvaI	CCWGG	1 cut(s)	890
MvnI	CGCG	4 cut(s)	23, 492, 1155, 2173
NdeI	CATATG	1 cut(s)	810
NlaIII	CATG	9 cut(s)	581, 595, 647, 692, 878, 1611, 1667, 1735, 1829
NlaIV	GGNNCC	6 cut(s)	227, 540, 887, 1299, 1903, 2075
NmuCI	GTSAC	1 cut(s)	409
NsbI	TGCGCA	1 cut(s)	2054
NspI	RCATGY	1 cut(s)	581
PaeI	GCATGC	1 cut(s)	581
PagI	TCATGA	2 cut(s)	1663, 1825
PctI	GAATGC	1 cut(s)	558
PdmI	GAANNNNTTC	1 cut(s)	1008
PfeI	GAWTC	9 cut(s)	84, 628, 824, 1061, 1103, 1784, 1820, 1915, 2194
PflFI	GACNNNGTC	1 cut(s)	389
PfoI	TCCNGGA	1 cut(s)	888
PleI	GAGTC	3 cut(s)	380, 414, 1248
PpsI	GAGTC	3 cut(s)	380, 414, 1248
Psp124BI	GAGCTC	2 cut(s)	207, 462
Psp6I	CCWGG	1 cut(s)	888
PspFI	CCCAGC	2 cut(s)	28, 149
PspGI	CCWGG	1 cut(s)	888
PspN4I	GGNNCC	6 cut(s)	227, 540, 887, 1299, 1903, 2075
PspPI	GGNCC	6 cut(s)	306, 348, 1297, 1436, 1506, 1611
PstI	CTGCAG	1 cut(s)	1553
PstNI	CAGNNNCTG	1 cut(s)	376
PsuI	RGATCY	3 cut(s)	160, 1082, 1394
PsyI	GACNNNGTC	1 cut(s)	389
PvuII	CAGCTG	1 cut(s)	1309
RsaI	GTAC	5 cut(s)	596, 623, 1152, 1547, 1585
RsaNI	GTAC	5 cut(s)	595, 622, 1151, 1546, 1584
RseI	CAYNNNNRTG	2 cut(s)	813, 1656
Rsr2I	CGGWCCG	1 cut(s)	348
RsrII	CGGWCCG	1 cut(s)	348
SacI	GAGCTC	2 cut(s)	207, 462
SacII	CCGCGG	1 cut(s)	2174
SaqAI	TTAA	7 cut(s)	507, 752, 1163, 1320, 1578, 1874, 2019
Sau96I	GGNCC	6 cut(s)	306, 348, 1297, 1436, 1506, 1611
ScaI	AGTACT	1 cut(s)	1547
SchI	GAGTC	3 cut(s)	380, 414, 1249
ScrFI	CCNGG	1 cut(s)	890
SduI	GDGCHC	9 cut(s)	69, 207, 360, 462, 926, 1539, 1676, 1731, 2086
SfaNI	GCATC	5 cut(s)	515, 1242, 1359, 1611, 2097
SfcI	CTRYAG	2 cut(s)	196, 1549
Sfr303I	CCGCGG	1 cut(s)	2174
SgrAI	CRCCGGYG	1 cut(s)	38
SgrBI	CCGCGG	1 cut(s)	2174
SinI	GGWCC	2 cut(s)	348, 1297
SmiMI	CAYNNNNRTG	2 cut(s)	813, 1656
SmlI	CTYRAG	4 cut(s)	414, 1351, 1363, 1577
SmoI	CTYRAG	4 cut(s)	414, 1351, 1363, 1577
SphI	GCATGC	1 cut(s)	581
SspMI	CTAG	4 cut(s)	291, 870, 1704, 2145
SstI	GAGCTC	2 cut(s)	207, 462
StyD4I	CCNGG	1 cut(s)	888
StyI	CCWWGG	1 cut(s)	1402
TaaI	ACNGT	8 cut(s)	336, 378, 409, 1017, 1390, 1469, 1515, 2202
TaiI	ACGT	1 cut(s)	557
TaqI	TCGA	6 cut(s)	54, 87, 207, 966, 1910, 1962
TaqII	GACCGA	1 cut(s)	336
TatI	WGTACW	2 cut(s)	594, 1545
TauI	GCSGC	3 cut(s)	272, 448, 2176
TfiI	GAWTC	9 cut(s)	84, 628, 824, 1061, 1103, 1784, 1820, 1915, 2194
Tru1I	TTAA	7 cut(s)	507, 752, 1163, 1320, 1578, 1874, 2019
Tru9I	TTAA	7 cut(s)	507, 752, 1163, 1320, 1578, 1874, 2019
TscAI	CASTG	4 cut(s)	859, 1188, 1229, 1984
TseFI	GTSAC	1 cut(s)	409
TseI	GCWGC	9 cut(s)	4, 25, 608, 793, 1121, 1138, 1313, 1687, 1696
Tsp45I	GTSAC	1 cut(s)	409
TspDTI	ATGAA	6 cut(s)	130, 646, 764, 1365, 1680, 1946
TspGWI	ACGGA	5 cut(s)	208, 328, 379, 742, 752
TspRI	CASTG	4 cut(s)	859, 1188, 1229, 1984
Tth111I	GACNNNGTC	1 cut(s)	389
Vha464I	CTTAAG	1 cut(s)	1577
VpaK11BI	GGWCC	2 cut(s)	348, 1297
XagI	CCTNNNNNAGG	1 cut(s)	1909
XapI	RAATTY	3 cut(s)	232, 1429, 2015
XbaI	TCTAGA	1 cut(s)	1703
XceI	RCATGY	1 cut(s)	581
XcmI	CCANNNNNNNNNTGG	1 cut(s)	322
XmnI	GAANNNNTTC	1 cut(s)	1008
XspI	CTAG	4 cut(s)	291, 870, 1704, 2145
ZrmI	AGTACT	1 cut(s)	1547

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.