pycom11g27030

Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Forward (+)
29436247 .. 29439106
2860 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g27030.2

Sequence Viewer

Length: 1329 bp
ATGCTTGAAAGTCCAAAAGCCCACCCCGGTCTTTTTGAAGTAAAGTACGGCCGGTTCCCAAAAGGCCGCCAAACTACCGCGCCGAACGGCGCCGTTTTATGCGTCTCCATCTTCCCGCTGCACAGCGTTTTAGTCCAACCAATCTCTCGATTCGAATTCACAGAGGAAGAAGAAGCAACAATGCTGCACGAGTTGCTCCTTGCGCCGCTGGGCTACACCGGCGATCTGGCAATCGACGGCAGAGAGCACTCCAAGTCCACACCCATCATTTTCTGCTTCTCTTTCTACAGGGCTCTCATAGAGAAGATCATCACATTAGGGTTTTACTACAGGGAGCTTGACCGCTTCTCCGTCCGGTGCCGGAATTTAAGCTGGATTAGGTCTGCAAACGGCCATTGCCAATGGTTGTGGATATACTGTCTCTGTATTCCGGCCTCGGTGCTCCACATTGAGCAGAAACTGTTGGCGGACTCCGTCCCGATTTTGGCCACCGTAACTCAAGGCCTCAACAAGATTGAGCGCGATGACATTCGAGGTGGTCAGCTTCTTAACCTTTTACACAAAAGATGCCATTGTGGAGTTCCTGAGTTGCAAACGTGCATTCAAAGGCTTCTTTGGCATGCACATCAGGCCATGTATAACCAGCTTGCGGCGTGGGTGGATATGCTGCCCGAGTATATCCATATGCGTGCTGCAGAATCAATTTTATTTTCTGGAAAGGCTATCAGGGTTCTTCGCAATCCGAGTCATGCCTTTCGGCTCCAGGACATTGTGTATCCTCAACAGGTGCCTAGAGGCTCTCAGAAAGTTCAAGTATTTTCAGGAAAATCTCCTTTCCTCAAAGACCCTTTTGTGGATAAAGAATTGATTGGAGAAGAATTGCTTCCACAGTATGAGGCTGGTAAGGTTGAAACTATGCTTCTGGAACTAAAGAGTCGCCAATTGATGCGCCTACCTCCTCGCCAGTCAACTGCGGACGCTGACCTTATGGTCCCATTTCAGCTGGCTGCAATTAAGACTATAAGTGAGGAAGACAAGTATTTCTCAAGAGTATCTTTAAGGTTAAAGTCCATATTTGATTGTTCCTATCATTTCACTATGAGGTTTCATAAGAAGTGTTTATTCAGTTATCTGCCTATATCTGCTAGGATGCCTTCATTTGGAATGACAGTAAAATCCTCCCAAGGAGATTTACCGAAGGCAGATGGGAAATCAGGGCCAAGTGCTTCCTCAGAAATATCTCTTGACGGTTGGGATGGAATTGCTCTTGAATACTCTGTTGATTGGCCCTTACTGTTGCTCTTTACTCCAGAGGTGCTCTCTAAGTAA

Protein Analysis

443

Amino Acids

50.27

Weight (kDa)

8.39

Isoelectric Point (pI)

44.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 989
AccB1I GGYRCC 3 cut(s) 89, 357, 787
AccII CGCG 2 cut(s) 80, 522
AciI CCGC 8 cut(s) 67, 78, 116, 206, 343, 467, 650, 974
AcoI YGGCCR 3 cut(s) 49, 391, 486
AcsI RAATTY 2 cut(s) 155, 364
AcyI GRCGYC 1 cut(s) 90
AfaI GTAC 1 cut(s) 47
AfiI CCNNNNNNNGG 4 cut(s) 484, 649, 853, 1160
AgsI TTSAA 6 cut(s) 8, 38, 605, 812, 911, 1271
AjnI CCWGG 1 cut(s) 762
AluBI AGCT 5 cut(s) 337, 372, 544, 646, 1003
AluI AGCT 5 cut(s) 337, 372, 544, 646, 1003
Alw21I GWGCWC 3 cut(s) 249, 444, 1320
Alw26I GTCTC 2 cut(s) 109, 425
AlwNI CAGNNNCTG 1 cut(s) 460
Ama87I CYCGRG 1 cut(s) 671
AoxI GGCC 9 cut(s) 49, 64, 391, 432, 486, 502, 630, 1217, 1286
ApeKI GCWGC 5 cut(s) 118, 184, 667, 692, 1007
ApoI RAATTY 2 cut(s) 155, 364
Asp700I GAANNNNTTC 1 cut(s) 882
AspLEI GCGC 5 cut(s) 82, 92, 205, 522, 951
AspS9I GGNCC 3 cut(s) 991, 1217, 1287
AsuC2I CCSGG 1 cut(s) 27
AsuII TTCGAA 1 cut(s) 153
AvaI CYCGRG 1 cut(s) 671
AvaII GGWCC 1 cut(s) 991
BalI TGGCCA 1 cut(s) 488
BanI GGYRCC 3 cut(s) 89, 357, 787
BanII GRGCYC 1 cut(s) 295
BauI CACGAG 1 cut(s) 188
BbsI GAAGAC 1 cut(s) 1038
Bbv12I GWGCWC 3 cut(s) 249, 444, 1320
BbvI GCAGC 5 cut(s) 105, 171, 654, 679, 994
BccI CCATC 4 cut(s) 116, 272, 1199, 1250
BceAI ACGGC 5 cut(s) 64, 77, 103, 253, 406
BciT130I CCWGG 1 cut(s) 764
BciVI GTATCC 1 cut(s) 786
BcnI CCSGG 1 cut(s) 27
BcoDI GTCTC 2 cut(s) 109, 425
BfaI CTAG 2 cut(s) 792, 1146
BfmI CTRYAG 3 cut(s) 286, 328, 693
BfoI RGCGCY 1 cut(s) 93
BfuI GTATCC 1 cut(s) 786
BisI GCNGC 8 cut(s) 67, 119, 185, 206, 651, 668, 693, 1008
BlsI GCNGC 8 cut(s) 68, 120, 186, 207, 652, 669, 694, 1009
Bme1390I CCNGG 2 cut(s) 27, 764
Bme18I GGWCC 1 cut(s) 991
BmeT110I CYCGRG 1 cut(s) 671
BmgT120I GGNCC 3 cut(s) 991, 1217, 1287
BmiI GGNNCC 6 cut(s) 56, 91, 359, 761, 789, 993
BmrFI CCNGG 2 cut(s) 27, 764
BmsI GCATC 3 cut(s) 557, 936, 1140
BpiI GAAGAC 1 cut(s) 1038
BplI GAGNNNNNCTC 1 cut(s) 1304
BpmI CTGGAG 2 cut(s) 746, 1293
Bpu14I TTCGAA 1 cut(s) 153
BpuEI CTTGAG 2 cut(s) 483, 1030
BpuMI CCSGG 1 cut(s) 27
BsaHI GRCGYC 1 cut(s) 90
BsaJI CCNNGG 3 cut(s) 25, 435, 1183
BsaWI WCCGGW 1 cut(s) 354
BsaXI ACNNNNNCTCC 2 cut(s) 332, 362
Bsc4I CCNNNNNNNGG 4 cut(s) 484, 649, 853, 1160
Bse118I RCCGGY 2 cut(s) 51, 218
Bse1I ACTGG 1 cut(s) 964
Bse3DI GCAATG 1 cut(s) 394
BseBI CCWGG 1 cut(s) 764
BseDI CCNNGG 3 cut(s) 25, 435, 1183
BseGI GGATG 2 cut(s) 1155, 1261
BseLI CCNNNNNNNGG 4 cut(s) 484, 649, 853, 1160
BseMI GCAATG 1 cut(s) 394
BseMII CTCAG 3 cut(s) 576, 815, 1245
BseNI ACTGG 1 cut(s) 964
BseRI GAGGAG 1 cut(s) 948
BseX3I CGGCCG 1 cut(s) 49
BseXI GCAGC 5 cut(s) 105, 171, 654, 679, 994
BseYI CCCAGC 1 cut(s) 208
BsgI GTGCAG 2 cut(s) 104, 170
Bsh1236I CGCG 2 cut(s) 80, 522
Bsh1285I CGRYCG 1 cut(s) 52
BshFI GGCC 9 cut(s) 51, 66, 393, 434, 488, 504, 632, 1219, 1288
BshNI GGYRCC 3 cut(s) 89, 357, 787
BsiEI CGRYCG 1 cut(s) 52
BsiHKAI GWGCWC 3 cut(s) 249, 444, 1320
BsiHKCI CYCGRG 1 cut(s) 671
BsiSI CCGG 6 cut(s) 27, 52, 219, 355, 361, 431
BslFI GGGAC 2 cut(s) 461, 977
BslI CCNNNNNNNGG 4 cut(s) 484, 649, 853, 1160
BsmAI GTCTC 2 cut(s) 109, 425
BsmBI CGTCTC 1 cut(s) 109
BsmFI GGGAC 2 cut(s) 461, 977
BsmI GAATGC 1 cut(s) 600
BsnI GGCC 9 cut(s) 51, 66, 393, 434, 488, 504, 632, 1219, 1288
BsoBI CYCGRG 1 cut(s) 671
Bsp119I TTCGAA 1 cut(s) 153
Bsp1286I GDGCHC 4 cut(s) 249, 295, 444, 1320
Bsp143I GATC 2 cut(s) 223, 306
BspACI CCGC 8 cut(s) 67, 78, 116, 206, 343, 467, 650, 974
BspANI GGCC 9 cut(s) 51, 66, 393, 434, 488, 504, 632, 1219, 1288
BspCNI CTCAG 3 cut(s) 577, 814, 1244
BspFNI CGCG 2 cut(s) 80, 522
BspLI GGNNCC 6 cut(s) 56, 91, 359, 761, 789, 993
BspMAI CTGCAG 1 cut(s) 697
BspT104I TTCGAA 1 cut(s) 153
BspT107I GGYRCC 3 cut(s) 89, 357, 787
BsrDI GCAATG 1 cut(s) 394
BsrFI RCCGGY 2 cut(s) 51, 218
BsrI ACTGG 1 cut(s) 964
BssAI RCCGGY 2 cut(s) 51, 218
BssECI CCNNGG 3 cut(s) 25, 435, 1183
BssMI GATC 2 cut(s) 223, 306
BssNI GRCGYC 1 cut(s) 90
BssSI CACGAG 1 cut(s) 188
BssT1I CCWWGG 1 cut(s) 1183
Bst2BI CACGAG 1 cut(s) 188
Bst2UI CCWGG 1 cut(s) 764
Bst4CI ACNGT 7 cut(s) 419, 462, 493, 891, 1171, 1250, 1296
BstACI GRCGYC 1 cut(s) 90
BstAPI GCANNNNNTGC 1 cut(s) 193
BstBI TTCGAA 1 cut(s) 153
BstC8I GCNNGC 4 cut(s) 621, 648, 690, 1005
BstDEI CTNAG 4 cut(s) 585, 801, 1231, 1323
BstF5I GGATG 2 cut(s) 1155, 1261
BstFNI CGCG 2 cut(s) 80, 522
BstH2I RGCGCY 1 cut(s) 93
BstHHI GCGC 5 cut(s) 82, 92, 205, 522, 951
BstKTI GATC 2 cut(s) 226, 309
BstMAI GTCTC 2 cut(s) 109, 425
BstMBI GATC 2 cut(s) 223, 306
BstMCI CGRYCG 1 cut(s) 52
BstMWI GCNNNNNNNGC 5 cut(s) 193, 202, 219, 616, 629
BstNI CCWGG 1 cut(s) 764
BstNSI RCATGY 1 cut(s) 623
BstSCI CCNGG 2 cut(s) 25, 762
BstSFI CTRYAG 3 cut(s) 286, 328, 693
BstUI CGCG 2 cut(s) 80, 522
BstV1I GCAGC 5 cut(s) 105, 171, 654, 679, 994
BstV2I GAAGAC 1 cut(s) 1038
BstZI CGGCCG 1 cut(s) 49
BsuI GTATCC 1 cut(s) 786
BsuRI GGCC 9 cut(s) 51, 66, 393, 434, 488, 504, 632, 1219, 1288
BtgZI GCGATG 1 cut(s) 537
BtsCI GGATG 2 cut(s) 1155, 1261
Cac8I GCNNGC 4 cut(s) 621, 648, 690, 1005
CaiI CAGNNNCTG 1 cut(s) 460
CfoI GCGC 5 cut(s) 82, 92, 205, 522, 951
Cfr10I RCCGGY 2 cut(s) 51, 218
Cfr13I GGNCC 3 cut(s) 991, 1217, 1287
CseI GACGC 2 cut(s) 91, 986
Csp6I GTAC 1 cut(s) 46
CspCI CAANNNNNGTGG 2 cut(s) 389, 424
CviAII CATG 3 cut(s) 620, 634, 749
CviQI GTAC 1 cut(s) 46
DdeI CTNAG 4 cut(s) 585, 801, 1231, 1323
DinI GGCGCC 1 cut(s) 91
DpnI GATC 2 cut(s) 225, 308
DpnII GATC 2 cut(s) 223, 306
DrdI GACNNNNNNGTC 1 cut(s) 989
DseDI GACNNNNNNGTC 1 cut(s) 989
EaeI YGGCCR 3 cut(s) 49, 391, 486
EagI CGGCCG 1 cut(s) 49
EciI GGCGGA 1 cut(s) 482
EclXI CGGCCG 1 cut(s) 49
Eco130I CCWWGG 1 cut(s) 1183
Eco147I AGGCCT 1 cut(s) 504
Eco24I GRGCYC 1 cut(s) 295
Eco47I GGWCC 1 cut(s) 991
Eco52I CGGCCG 1 cut(s) 49
Eco88I CYCGRG 1 cut(s) 671
EcoRI GAATTC 1 cut(s) 155
EcoRII CCWGG 1 cut(s) 762
EcoT14I CCWWGG 1 cut(s) 1183
EcoT38I GRGCYC 1 cut(s) 295
EgeI GGCGCC 1 cut(s) 91
EheI GGCGCC 1 cut(s) 91
ErhI CCWWGG 1 cut(s) 1183
Esp3I CGTCTC 1 cut(s) 109
FaeI CATG 3 cut(s) 623, 637, 752
FalI AAGNNNNNCTT 4 cut(s) 867, 899, 1039, 1071
FaqI GGGAC 2 cut(s) 461, 977
FatI CATG 3 cut(s) 619, 633, 748
FauI CCCGC 1 cut(s) 123
FauNDI CATATG 1 cut(s) 684
Fnu4HI GCNGC 8 cut(s) 67, 119, 185, 206, 651, 668, 693, 1008
FokI GGATG 2 cut(s) 1162, 1268
FriOI GRGCYC 1 cut(s) 295
Fsp4HI GCNGC 8 cut(s) 67, 119, 185, 206, 651, 668, 693, 1008
FspBI CTAG 2 cut(s) 792, 1146
GlaI GCGC 5 cut(s) 81, 91, 204, 521, 950
GluI GCNGC 8 cut(s) 67, 119, 185, 206, 651, 668, 693, 1008
GsaI CCCAGC 1 cut(s) 212
GsuI CTGGAG 2 cut(s) 746, 1293
HaeII RGCGCY 1 cut(s) 93
HaeIII GGCC 9 cut(s) 51, 66, 393, 434, 488, 504, 632, 1219, 1288
HapII CCGG 6 cut(s) 27, 52, 219, 355, 361, 431
HgaI GACGC 2 cut(s) 91, 986
HhaI GCGC 5 cut(s) 82, 92, 205, 522, 951
Hin1I GRCGYC 1 cut(s) 90
Hin1II CATG 3 cut(s) 623, 637, 752
Hin6I GCGC 5 cut(s) 80, 90, 203, 520, 949
HinP1I GCGC 5 cut(s) 80, 90, 203, 520, 949
HincII GTYRAC 1 cut(s) 969
HindII GTYRAC 1 cut(s) 969
HinfI GANTC 5 cut(s) 150, 470, 698, 745, 934
HpaII CCGG 6 cut(s) 27, 52, 219, 355, 361, 431
Hpy166II GTNNAC 2 cut(s) 258, 969
Hpy188I TCNGA 3 cut(s) 744, 804, 1234
Hpy8I GTNNAC 2 cut(s) 258, 969
Hpy99I CGWCG 1 cut(s) 239
HpyAV CCTTC 2 cut(s) 1164, 1192
HpyCH4III ACNGT 7 cut(s) 419, 462, 493, 891, 1171, 1250, 1296
HpyCH4IV ACGT 1 cut(s) 596
HpyCH4V TGCA 8 cut(s) 121, 187, 386, 592, 600, 623, 695, 1010
HpyF10VI GCNNNNNNNGC 5 cut(s) 193, 202, 219, 616, 629
HpyF3I CTNAG 4 cut(s) 585, 801, 1231, 1323
HpySE526I ACGT 1 cut(s) 596
Hsp92I GRCGYC 1 cut(s) 90
Hsp92II CATG 3 cut(s) 623, 637, 752
HspAI GCGC 5 cut(s) 80, 90, 203, 520, 949
KasI GGCGCC 1 cut(s) 89
Kzo9I GATC 2 cut(s) 223, 306
LmnI GCTCC 4 cut(s) 201, 334, 447, 765
Lsp1109I GCAGC 5 cut(s) 105, 171, 654, 679, 994
LweI GCATC 3 cut(s) 557, 936, 1140
MaeI CTAG 2 cut(s) 792, 1146
MaeII ACGT 1 cut(s) 596
MaeIII GTNAC 1 cut(s) 493
MalI GATC 2 cut(s) 225, 308
MboI GATC 2 cut(s) 223, 306
MboII GAAGA 7 cut(s) 103, 179, 182, 316, 725, 887, 1043
MfeI CAATTG 1 cut(s) 941
MhlI GDGCHC 4 cut(s) 249, 295, 444, 1320
MlsI TGGCCA 1 cut(s) 488
MluCI AATT 8 cut(s) 155, 364, 702, 863, 878, 941, 1011, 1260
MluNI TGGCCA 1 cut(s) 488
Mly113I GGCGCC 1 cut(s) 90
MlyI GAGTC 3 cut(s) 464, 754, 943
MmeI TCCRAC 1 cut(s) 160
Mox20I TGGCCA 1 cut(s) 488
MroXI GAANNNNTTC 1 cut(s) 882
MscI TGGCCA 1 cut(s) 488
MseI TTAA 5 cut(s) 368, 549, 1014, 1058, 1064
MslI CAYNNNNRTG 1 cut(s) 687
Msp20I TGGCCA 1 cut(s) 488
MspA1I CMGCKG 3 cut(s) 118, 208, 1003
MspI CCGG 6 cut(s) 27, 52, 219, 355, 361, 431
MspR9I CCNGG 2 cut(s) 27, 764
MunI CAATTG 1 cut(s) 941
Mva1269I GAATGC 1 cut(s) 600
MvaI CCWGG 1 cut(s) 764
MvnI CGCG 2 cut(s) 80, 522
MwoI GCNNNNNNNGC 5 cut(s) 193, 202, 219, 616, 629
NarI GGCGCC 1 cut(s) 90
NciI CCSGG 1 cut(s) 27
NdeI CATATG 1 cut(s) 684
NdeII GATC 2 cut(s) 223, 306
NlaIII CATG 3 cut(s) 623, 637, 752
NlaIV GGNNCC 6 cut(s) 56, 91, 359, 761, 789, 993
NspI RCATGY 1 cut(s) 623
NspV TTCGAA 1 cut(s) 153
PaeI GCATGC 1 cut(s) 623
PceI AGGCCT 1 cut(s) 504
PctI GAATGC 1 cut(s) 600
PdmI GAANNNNTTC 1 cut(s) 882
PfeI GAWTC 2 cut(s) 150, 698
PflFI GACNNNGTC 1 cut(s) 473
PfoI TCCNGGA 1 cut(s) 762
PkrI GCNGC 8 cut(s) 68, 120, 186, 207, 652, 669, 694, 1009
PleI GAGTC 3 cut(s) 464, 753, 942
PluTI GGCGCC 1 cut(s) 93
PpsI GAGTC 3 cut(s) 464, 753, 942
Psp6I CCWGG 1 cut(s) 762
PspFI CCCAGC 1 cut(s) 208
PspGI CCWGG 1 cut(s) 762
PspN4I GGNNCC 6 cut(s) 56, 91, 359, 761, 789, 993
PspPI GGNCC 3 cut(s) 991, 1217, 1287
PsrI GAACNNNNNNTAC 2 cut(s) 38, 70
PstI CTGCAG 1 cut(s) 697
PstNI CAGNNNCTG 1 cut(s) 460
PsyI GACNNNGTC 1 cut(s) 473
PvuII CAGCTG 1 cut(s) 1003
RsaI GTAC 1 cut(s) 47
RsaNI GTAC 1 cut(s) 46
RseI CAYNNNNRTG 1 cut(s) 687
SaqAI TTAA 5 cut(s) 368, 549, 1014, 1058, 1064
SatI GCNGC 8 cut(s) 67, 119, 185, 206, 651, 668, 693, 1008
Sau3AI GATC 2 cut(s) 223, 306
Sau96I GGNCC 3 cut(s) 991, 1217, 1287
SchI GAGTC 3 cut(s) 464, 754, 943
ScrFI CCNGG 2 cut(s) 27, 764
SduI GDGCHC 4 cut(s) 249, 295, 444, 1320
SfaNI GCATC 3 cut(s) 557, 936, 1140
SfcI CTRYAG 3 cut(s) 286, 328, 693
SfoI GGCGCC 1 cut(s) 91
SfuI TTCGAA 1 cut(s) 153
SgrAI CRCCGGYG 1 cut(s) 218
SinI GGWCC 1 cut(s) 991
SmiMI CAYNNNNRTG 1 cut(s) 687
SmlI CTYRAG 2 cut(s) 498, 1045
SmoI CTYRAG 2 cut(s) 498, 1045
SphI GCATGC 1 cut(s) 623
Sse9I AATT 8 cut(s) 155, 364, 702, 863, 878, 941, 1011, 1260
SseBI AGGCCT 1 cut(s) 504
SsiI CCGC 8 cut(s) 67, 78, 116, 206, 343, 467, 650, 974
SspDI GGCGCC 1 cut(s) 89
SspMI CTAG 2 cut(s) 792, 1146
StuI AGGCCT 1 cut(s) 504
StyD4I CCNGG 2 cut(s) 25, 762
StyI CCWWGG 1 cut(s) 1183
TaaI ACNGT 7 cut(s) 419, 462, 493, 891, 1171, 1250, 1296
TaiI ACGT 1 cut(s) 599
TaqI TCGA 4 cut(s) 148, 153, 234, 532
TasI AATT 8 cut(s) 155, 364, 702, 863, 878, 941, 1011, 1260
TauI GCSGC 3 cut(s) 69, 208, 653
TfiI GAWTC 2 cut(s) 150, 698
Tru1I TTAA 5 cut(s) 368, 549, 1014, 1058, 1064
Tru9I TTAA 5 cut(s) 368, 549, 1014, 1058, 1064
TseI GCWGC 5 cut(s) 118, 184, 667, 692, 1007
TspDTI ATGAA 2 cut(s) 1097, 1146
TspGWI ACGGA 2 cut(s) 340, 463
Tth111I GACNNNGTC 1 cut(s) 473
VpaK11BI GGWCC 1 cut(s) 991
XapI RAATTY 2 cut(s) 155, 364
XceI RCATGY 1 cut(s) 623
XmnI GAANNNNTTC 1 cut(s) 882
XspI CTAG 2 cut(s) 792, 1146
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.