Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0007962

Physical Location & Seq

Genomic Coordinates Forward (+)

13584397 .. 13589916

Gene Structure 5520 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00173630.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2208 bp

ATGCTACACGAGTTGTTACTTGCACTACTGGGCTACACCGGCGATCTCATAATCGACGAGAGGGAGCACTCCACCTCTCTCGGAATCGACTCCCCCATTTCCGACCACCCTACTTTCAACCTCGCTTCCGACATCTCCTTCATCCAACCCAGCGAAAGGGATCTCACACAGAGAATCATCACCTTAGGGTTTTATTACAGAGAGCTTGACCGCTTCGCCACCAGGTCTCGGAATTTGAGCTGGATAAGGTCCTCAAAGCCGAGTCCTGCAGTCGCCGCCGGCAAAATTGAGAAGCCGAGTGTGTACCGGAGAGCCATTGCCAACGGAATTGTGGAGATACTCTCGGTTTATAGGTCGGCGGTTCTTCACATTGAGCAGAAATTGTTGGCAGAGTCCATTCCCATACTGGCAACTGTGACTCAAGGCCTCACGAAGTTTTTCGTGCTTTTGCCGCCGTTGTATGAGCTCATACTGGAGATTGAGAGGGATGACATTCGTGGCGGTCAGCTGCTTAATCTTTTGCATAAAAGATGCCATTGTGGAGTGCCAGAGTTGCAAACCTGCATTCAGAGGCTTCTCTGGCATGCACATCAGGTCATGTATAACCAGCTAGCAGCGTGGATGGTGTATGGGATCCTCCAAGACCAGCATGGAGAGTTTTTCATTAGGAGGATGGAAGATAAGGATGTAGAGCATGGCTCATCTCATCAAGACATATCTGAAAAGTTGGTACGCATGTCAACGGACGATACATCAGATTGGCACTTGGGATTTCATATCTATTTGGATATGCTTCCCGAATATATCCAGATGCGTGTCGCAGAATCAGTATTGTTTGCTGGCAAGGCCATCAGGGTTCTTCGCAATCCAAGTCATGCCTTTCGATTTCAGGATGATGTTTTACATCAGCAGGTGCCAAGGGGATCTCATAAAATCCAAGGATTTTCAGGACGTTTCCCATTTCACAAAGACTCTTTTGTTGAGAAAGAGTTGATTGGAGAAGAAATGCTTCCACAGTCTGAGGCCGATAAGATTGAAACGATGCTTTTGGAACTAAAGGAATCATCCGAGTTCCACAAAAGATCCTTTGAATGTGCAGTAGACTCAATACGGGCTATTGCTGCCAGCCATCTTTGGCAGCTTGTGGTTGTACGTGCTGACTTGAATGGTCATCTAAAGGCACTGAAAGACTATTTTCTGTTAGCAAAAGGAGATTTCTTTCAGTGTTTTCTTGAAGAGAGTCGCCAATTGATGCGGCTACCTCCTCGCCAGTCAACCGCGGAGGCTGATCTTATGGTCCCTTTCCAGCTGGCTGCTCTTAAGACTATAGGTGAGGAAGACAAACATTTCTCTAGAGTATCCTTAAGGATGCCTTCATTTGGGATGACTATTAAATCTTCCCAAGTAGATGTACCAAGGACAGATGGGAGTTCAGGACTATCAATTGCTTCTTCAGATATAACCCTTGATGGTTGGGATGGGATCGCTCTTGAATACTTCGTTGATTGGCCCTTACAGTTGTTCTTTACCCCAGAAGTGCTCTCTAAGTACTGCCGGGTTTTCCAATATTTGCTAAGGCTCAAGCGAACACAAATGGAGTTGGAGAAATCATGGGCCTCAGTGATGCATCAGGATCACACAGATTTTGCCACACATCGGAATGATCGTGTAAACTGCTCAGTATCACAACAACGAAGGCAGCGAAGCAGACCAATGTGGCGTATTAGAGAGCATATGGCTTTCTTGATCAGAAATCTTCAATTTTATATACAGGTGGATGTGATAGAATCCCAATGGAATGTTTTGCAAGCTCATATCCAAGATTCTCATGACTTTAATGGACTTGTAGGCGTCCATCTGGAGTACTTAAACGCTCTAATTTCACAATCTTTCTTGGACATTGGCTCTTTATCAAGGATACTTGACAGCATAATGAAACTTTGCATTCGGTTCTGCTGGAACATTGAGAACCAAGAAAGCAGTGCAAATACATCTGAATTGGAACATATTATAGAGGAATTCAACAAGAAATCGAACTCCCTGTACACGATACTGCGCAGTAGTAGGCTTGTAGGGAGTCAGCGAGCCCCATTTCTTAGGCGTTTTCTGATGCGTCTGAACTTCAATTCCTTCTTTGAGGCGACAGCTAGAGGTGTGCTGAATGTTGTTAGACCACGCCCTGGAGTTTCTGTTTTGAATCAACAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000226 GO:0000278 GO:0000280 GO:0000923 GO:0000930 GO:0003674 GO:0005198 GO:0005200 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005815 GO:0005819 GO:0005856 GO:0005911 GO:0006996 GO:0007010 GO:0007017 GO:0007020 GO:0007049 GO:0007051 GO:0007052 GO:0008092 GO:0008150 GO:0009506 GO:0009605 GO:0009607 GO:0009624 GO:0009987 GO:0015630 GO:0015631 GO:0016043 GO:0022402 GO:0022414 GO:0022607 GO:0030054 GO:0030865 GO:0031109 GO:0031122 GO:0032153 GO:0032155 GO:0032991 GO:0034622 GO:0040007 GO:0043015 GO:0043207 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043622 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044450 GO:0044464 GO:0046785 GO:0048285 GO:0050896 GO:0051225 GO:0051258 GO:0051321 GO:0051415 GO:0051418 GO:0051704 GO:0051707 GO:0055044 GO:0065003 GO:0070925 GO:0071840 GO:0090307 GO:0097435 GO:0140014 GO:1902850 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Spc97_Spc98

Protein Analysis

735

Amino Acids

84.83

Weight (kDa)

6.58

Isoelectric Point (pI)

53.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GCP_N_terminal	PF17681	2 - 383	2.2e-46	Gamma tubulin complex component N-terminal
GCP_C_terminal	PF04130	388 - 712	1.6e-56	Gamma tubulin complex component C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007962)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53760 AT3G53760 AT3G53760
fragaria_vesca	FvH4_2g25810 FvH4_2g25810 FvH4_2g25810 FvH4_2g25810 FvH4_2g25810
malus_domestica	MD03G1288900.v1.1
prunus_persica	Prupe.8G262200_v2.0.a1 Prupe.8G262200_v2.0.a1
pyrus_communis	pycom03g22900 pycom11g27030
rosa_chinensis	RchiOBHm_Chr6g0294121
rosa_laevigata	RLG00000011897
rosa_multiflora	Rmu_sc0005037.1_g000009
rosa_roxburghii	Rroxscaffold_7G00173630
rosa_rugosa	Rorug06G0241400 Rorug06G0241500 Rorug06G0241600 Rorug06G0241700
rosa_samantha	Rh6AG354000 Rh6DG354800
rosa_wichuraiana	Rw6G030850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	901
Acc16I	TGCGCA	1 cut(s)	2057
Acc36I	ACCTGC	2 cut(s)	569, 901
AccB1I	GGYRCC	1 cut(s)	913
AccB7I	CCANNNNNTGG	1 cut(s)	2180
AccI	GTMKAC	1 cut(s)	1101
AccII	CGCG	1 cut(s)	1280
AciI	CCGC	8 cut(s)	211, 276, 359, 452, 501, 1255, 1278, 1280
AclWI	GGATC	7 cut(s)	168, 628, 641, 931, 1077, 1490, 1641
AcsI	RAATTY	2 cut(s)	232, 2018
AcuI	CTGAAG	1 cut(s)	1437
AcyI	GRCGYC	1 cut(s)	1851
AfaI	GTAC	7 cut(s)	305, 732, 1152, 1413, 1550, 1865, 2045
AfiI	CCNNNNNNNGG	5 cut(s)	156, 228, 1379, 1656, 2180
AflII	CTTAAG	2 cut(s)	1319, 1363
AjnI	CCWGG	2 cut(s)	221, 2179
AloI	GAACNNNNNNTCC	2 cut(s)	2111, 2143
AluBI	AGCT	9 cut(s)	205, 240, 466, 508, 610, 1141, 1309, 1811, 2147
AluI	AGCT	9 cut(s)	205, 240, 466, 508, 610, 1141, 1309, 1811, 2147
Alw21I	GWGCWC	3 cut(s)	69, 468, 1542
Alw26I	GTCTC	1 cut(s)	231
AlwI	GGATC	7 cut(s)	168, 628, 641, 931, 1077, 1490, 1641
AoxI	GGCC	5 cut(s)	424, 846, 1023, 1508, 1614
ApeKI	GCWGC	6 cut(s)	508, 614, 1121, 1138, 1313, 1699
ApoI	RAATTY	2 cut(s)	232, 2018
Asp700I	GAANNNNTTC	2 cut(s)	437, 1008
AspLEI	GCGC	1 cut(s)	2058
AspS9I	GGNCC	4 cut(s)	249, 1297, 1509, 1614
AsuC2I	CCSGG	1 cut(s)	1556
AsuHPI	GGTGA	2 cut(s)	172, 1343
AsuNHI	GCTAGC	1 cut(s)	610
AvaII	GGWCC	2 cut(s)	249, 1297
AxyI	CCTNAGG	1 cut(s)	184
BaeI	ACNNNNGTAYC	2 cut(s)	722, 755
BamHI	GGATCC	1 cut(s)	633
BanI	GGYRCC	1 cut(s)	913
BanII	GRGCYC	2 cut(s)	468, 2089
BauI	CACGAG	1 cut(s)	8
BbsI	GAAGAC	1 cut(s)	1344
Bbv12I	GWGCWC	3 cut(s)	69, 468, 1542
BbvI	GCAGC	6 cut(s)	495, 626, 1108, 1150, 1300, 1711
BccI	CCATC	8 cut(s)	616, 667, 857, 1137, 1418, 1463, 1472, 1863
BceAI	ACGGC	1 cut(s)	439
BciT130I	CCWGG	2 cut(s)	223, 2181
BciVI	GTATCC	2 cut(s)	1369, 1911
BclI	TGATCA	1 cut(s)	1746
BcnI	CCSGG	1 cut(s)	1556
BcoDI	GTCTC	1 cut(s)	231
BfaI	CTAG	3 cut(s)	611, 1353, 2148
BfmI	CTRYAG	2 cut(s)	267, 1326
BfrI	CTTAAG	2 cut(s)	1319, 1363
BfuAI	ACCTGC	2 cut(s)	569, 901
BfuI	GTATCC	2 cut(s)	1369, 1911
BisI	GCNGC	9 cut(s)	276, 452, 509, 615, 1122, 1139, 1256, 1314, 1700
BlsI	GCNGC	9 cut(s)	277, 453, 510, 616, 1123, 1140, 1257, 1315, 1701
BmcAI	AGTACT	2 cut(s)	1550, 1865
Bme1390I	CCNGG	3 cut(s)	223, 1556, 2181
Bme18I	GGWCC	2 cut(s)	249, 1297
BmgT120I	GGNCC	4 cut(s)	249, 1297, 1509, 1614
BmiI	GGNNCC	3 cut(s)	635, 915, 1299
BmrFI	CCNGG	3 cut(s)	223, 1556, 2181
BmrI	ACTGGG	1 cut(s)	38
BmsI	GCATC	8 cut(s)	521, 801, 1032, 1242, 1359, 1614, 1636, 2100
BmtI	GCTAGC	1 cut(s)	614
BmuI	ACTGGG	1 cut(s)	38
BpiI	GAAGAC	1 cut(s)	1344
BplI	GAGNNNNNCTC	4 cut(s)	326, 358, 683, 715
BpmI	CTGGAG	3 cut(s)	494, 1880, 2202
Bpu10I	CCTNAGC	1 cut(s)	1574
BpuEI	CTTGAG	2 cut(s)	405, 1565
BpuMI	CCSGG	1 cut(s)	1556
BsaAI	YACGTR	1 cut(s)	1154
BsaHI	GRCGYC	1 cut(s)	1851
BsaI	GGTCTC	1 cut(s)	231
BsaJI	CCNNGG	5 cut(s)	917, 937, 1278, 1415, 2179
BsaWI	WCCGGW	1 cut(s)	306
BsaXI	ACNNNNNCTCC	2 cut(s)	2175, 2205
Bsc4I	CCNNNNNNNGG	5 cut(s)	156, 228, 1379, 1656, 2180
Bse118I	RCCGGY	2 cut(s)	38, 278
Bse1I	ACTGG	4 cut(s)	33, 411, 477, 1270
Bse21I	CCTNAGG	1 cut(s)	184
Bse3DI	GCAATG	1 cut(s)	315
BseBI	CCWGG	2 cut(s)	223, 2181
BseDI	CCNNGG	5 cut(s)	917, 937, 1278, 1415, 2179
BseLI	CCNNNNNNNGG	5 cut(s)	156, 228, 1379, 1656, 2180
BseMI	GCAATG	1 cut(s)	315
BseMII	CTCAG	3 cut(s)	1011, 1632, 1692
BseNI	ACTGG	4 cut(s)	33, 411, 477, 1270
BseRI	GAGGAG	1 cut(s)	1254
BseXI	GCAGC	6 cut(s)	495, 626, 1108, 1150, 1300, 1711
BseYI	CCCAGC	1 cut(s)	149
BsgI	GTGCAG	1 cut(s)	1116
Bsh1236I	CGCG	1 cut(s)	1280
BshFI	GGCC	5 cut(s)	426, 848, 1025, 1510, 1616
BshNI	GGYRCC	1 cut(s)	913
BsiHKAI	GWGCWC	3 cut(s)	69, 468, 1542
BsiSI	CCGG	4 cut(s)	39, 279, 307, 1555
BslFI	GGGAC	1 cut(s)	1283
BslI	CCNNNNNNNGG	5 cut(s)	156, 228, 1379, 1656, 2180
BsmAI	GTCTC	1 cut(s)	231
BsmFI	GGGAC	1 cut(s)	1283
BsmI	GAATGC	2 cut(s)	564, 1944
BsnI	GGCC	5 cut(s)	426, 848, 1025, 1510, 1616
Bso31I	GGTCTC	1 cut(s)	231
Bsp1286I	GDGCHC	4 cut(s)	69, 468, 1542, 2089
Bsp1407I	TGTACA	1 cut(s)	2043
BspACI	CCGC	8 cut(s)	211, 276, 359, 452, 501, 1255, 1278, 1280
BspANI	GGCC	5 cut(s)	426, 848, 1025, 1510, 1616
BspCNI	CTCAG	3 cut(s)	1012, 1631, 1691
BspFNI	CGCG	1 cut(s)	1280
BspHI	TCATGA	1 cut(s)	1828
BspLI	GGNNCC	3 cut(s)	635, 915, 1299
BspMAI	CTGCAG	1 cut(s)	271
BspMI	ACCTGC	2 cut(s)	569, 901
BspOI	GCTAGC	1 cut(s)	614
BspPI	GGATC	7 cut(s)	168, 628, 641, 931, 1077, 1490, 1641
BspT107I	GGYRCC	1 cut(s)	913
BspTI	CTTAAG	2 cut(s)	1319, 1363
BspTNI	GGTCTC	1 cut(s)	231
BsrDI	GCAATG	1 cut(s)	315
BsrFI	RCCGGY	2 cut(s)	38, 278
BsrGI	TGTACA	1 cut(s)	2043
BsrI	ACTGG	4 cut(s)	33, 411, 477, 1270
BssAI	RCCGGY	2 cut(s)	38, 278
BssECI	CCNNGG	5 cut(s)	917, 937, 1278, 1415, 2179
BssNI	GRCGYC	1 cut(s)	1851
BssSI	CACGAG	1 cut(s)	8
BssT1I	CCWWGG	3 cut(s)	917, 937, 1415
Bst2BI	CACGAG	1 cut(s)	8
Bst2UI	CCWGG	2 cut(s)	223, 2181
Bst4CI	ACNGT	4 cut(s)	415, 1017, 1518, 2205
Bst6I	CTCTTC	1 cut(s)	1230
BstACI	GRCGYC	1 cut(s)	1851
BstAFI	CTTAAG	2 cut(s)	1319, 1363
BstAUI	TGTACA	1 cut(s)	2043
BstBAI	YACGTR	1 cut(s)	1154
BstC8I	GCNNGC	8 cut(s)	280, 585, 612, 841, 1126, 1311, 1809, 2085
BstDEI	CTNAG	7 cut(s)	184, 1020, 1545, 1574, 1618, 1678, 2096
BstDSI	CCRYGG	1 cut(s)	1278
BstFNI	CGCG	1 cut(s)	1280
BstHHI	GCGC	1 cut(s)	2058
BstMAI	GTCTC	1 cut(s)	231
BstMWI	GCNNNNNNNGC	7 cut(s)	39, 275, 451, 553, 580, 845, 1121
BstNI	CCWGG	2 cut(s)	223, 2181
BstNSI	RCATGY	2 cut(s)	587, 739
BstSCI	CCNGG	3 cut(s)	221, 1554, 2179
BstSFI	CTRYAG	2 cut(s)	267, 1326
BstUI	CGCG	1 cut(s)	1280
BstV1I	GCAGC	6 cut(s)	495, 626, 1108, 1150, 1300, 1711
BstV2I	GAAGAC	1 cut(s)	1344
BstX2I	RGATCY	4 cut(s)	160, 633, 923, 1082
BstYI	RGATCY	4 cut(s)	160, 633, 923, 1082
Bsu36I	CCTNAGG	1 cut(s)	184
BsuI	GTATCC	2 cut(s)	1369, 1911
BsuRI	GGCC	5 cut(s)	426, 848, 1025, 1510, 1616
BtgI	CCRYGG	1 cut(s)	1278
BtsI	GCAGTG	1 cut(s)	1987
BtsIMutI	CAGTG	4 cut(s)	1181, 1229, 1626, 1987
BveI	ACCTGC	2 cut(s)	569, 901
Cac8I	GCNNGC	8 cut(s)	280, 585, 612, 841, 1126, 1311, 1809, 2085
CciI	TCATGA	1 cut(s)	1828
CfoI	GCGC	1 cut(s)	2058
Cfr10I	RCCGGY	2 cut(s)	38, 278
Cfr13I	GGNCC	4 cut(s)	249, 1297, 1509, 1614
Cfr42I	CCGCGG	1 cut(s)	1281
CseI	GACGC	2 cut(s)	1840, 2102
CsiI	ACCWGGT	1 cut(s)	221
Csp6I	GTAC	7 cut(s)	304, 731, 1151, 1412, 1549, 1864, 2044
CviAII	CATG	8 cut(s)	584, 598, 650, 695, 736, 875, 1611, 1829
CviQI	GTAC	7 cut(s)	304, 731, 1151, 1412, 1549, 1864, 2044
DdeI	CTNAG	7 cut(s)	184, 1020, 1545, 1574, 1618, 1678, 2096
Eam1104I	CTCTTC	1 cut(s)	1230
EarI	CTCTTC	1 cut(s)	1230
Ecl136II	GAGCTC	1 cut(s)	466
Eco130I	CCWWGG	3 cut(s)	917, 937, 1415
Eco147I	AGGCCT	1 cut(s)	426
Eco24I	GRGCYC	2 cut(s)	468, 2089
Eco31I	GGTCTC	1 cut(s)	231
Eco47I	GGWCC	2 cut(s)	249, 1297
Eco53kI	GAGCTC	1 cut(s)	466
Eco57I	CTGAAG	1 cut(s)	1437
Eco81I	CCTNAGG	1 cut(s)	184
EcoICRI	GAGCTC	1 cut(s)	466
EcoO109I	RGGNCCY	1 cut(s)	249
EcoRI	GAATTC	1 cut(s)	2018
EcoRII	CCWGG	2 cut(s)	221, 2179
EcoT14I	CCWWGG	3 cut(s)	917, 937, 1415
EcoT22I	ATGCAT	1 cut(s)	1629
EcoT38I	GRGCYC	2 cut(s)	468, 2089
ErhI	CCWWGG	3 cut(s)	917, 937, 1415
FaeI	CATG	8 cut(s)	587, 601, 653, 698, 739, 878, 1614, 1832
FalI	AAGNNNNNCTT	4 cut(s)	993, 1025, 1357, 1389
FaqI	GGGAC	1 cut(s)	1283
FatI	CATG	8 cut(s)	583, 597, 649, 694, 735, 874, 1610, 1828
FauNDI	CATATG	1 cut(s)	1734
FbaI	TGATCA	1 cut(s)	1746
FblI	GTMKAC	1 cut(s)	1101
Fnu4HI	GCNGC	9 cut(s)	276, 452, 509, 615, 1122, 1139, 1256, 1314, 1700
FriOI	GRGCYC	2 cut(s)	468, 2089
Fsp4HI	GCNGC	9 cut(s)	276, 452, 509, 615, 1122, 1139, 1256, 1314, 1700
FspBI	CTAG	3 cut(s)	611, 1353, 2148
FspI	TGCGCA	1 cut(s)	2057
GlaI	GCGC	1 cut(s)	2057
GluI	GCNGC	9 cut(s)	276, 452, 509, 615, 1122, 1139, 1256, 1314, 1700
GsaI	CCCAGC	1 cut(s)	153
GsuI	CTGGAG	3 cut(s)	494, 1880, 2202
HaeIII	GGCC	5 cut(s)	426, 848, 1025, 1510, 1616
HapII	CCGG	4 cut(s)	39, 279, 307, 1555
HgaI	GACGC	2 cut(s)	1840, 2102
HhaI	GCGC	1 cut(s)	2058
Hin1I	GRCGYC	1 cut(s)	1851
Hin1II	CATG	8 cut(s)	587, 601, 653, 698, 739, 878, 1614, 1832
Hin6I	GCGC	1 cut(s)	2056
HinP1I	GCGC	1 cut(s)	2056
HincII	GTYRAC	2 cut(s)	741, 1275
HindII	GTYRAC	2 cut(s)	741, 1275
HpaII	CCGG	4 cut(s)	39, 279, 307, 1555
HphI	GGTGA	2 cut(s)	172, 1343
Hpy166II	GTNNAC	6 cut(s)	304, 741, 1102, 1275, 1672, 2046
Hpy8I	GTNNAC	6 cut(s)	304, 741, 1102, 1275, 1672, 2046
Hpy99I	CGWCG	1 cut(s)	59
HpyAV	CCTTC	4 cut(s)	148, 1383, 1689, 2140
HpyCH4III	ACNGT	4 cut(s)	415, 1017, 1518, 2205
HpyCH4IV	ACGT	2 cut(s)	952, 1153
HpyF10VI	GCNNNNNNNGC	7 cut(s)	39, 275, 451, 553, 580, 845, 1121
HpyF3I	CTNAG	7 cut(s)	184, 1020, 1545, 1574, 1618, 1678, 2096
HpySE526I	ACGT	2 cut(s)	952, 1153
Hsp92I	GRCGYC	1 cut(s)	1851
Hsp92II	CATG	8 cut(s)	587, 601, 653, 698, 739, 878, 1614, 1832
HspAI	GCGC	1 cut(s)	2056
KroI	GCCGGC	1 cut(s)	278
KroNI	GCCGGC	1 cut(s)	280
Ksp22I	TGATCA	1 cut(s)	1746
KspI	CCGCGG	1 cut(s)	1281
LmnI	GCTCC	1 cut(s)	64
Lsp1109I	GCAGC	6 cut(s)	495, 626, 1108, 1150, 1300, 1711
LweI	GCATC	8 cut(s)	521, 801, 1032, 1242, 1359, 1614, 1636, 2100
MabI	ACCWGGT	1 cut(s)	221
MaeI	CTAG	3 cut(s)	611, 1353, 2148
MaeII	ACGT	2 cut(s)	952, 1153
MaeIII	GTNAC	2 cut(s)	15, 415
MboII	GAAGA	9 cut(s)	356, 689, 851, 1013, 1247, 1349, 1389, 1443, 1748
MfeI	CAATTG	2 cut(s)	1247, 1443
MflI	RGATCY	4 cut(s)	160, 633, 923, 1082
MhlI	GDGCHC	4 cut(s)	69, 468, 1542, 2089
MlyI	GAGTC	8 cut(s)	83, 271, 401, 412, 965, 1097, 1249, 2086
MmeI	TCCRAC	4 cut(s)	126, 153, 169, 1581
Mph1103I	ATGCAT	1 cut(s)	1629
MroNI	GCCGGC	1 cut(s)	278
MroXI	GAANNNNTTC	2 cut(s)	437, 1008
MseI	TTAA	6 cut(s)	513, 1320, 1364, 1392, 1836, 1868
MslI	CAYNNNNRTG	1 cut(s)	1659
MspA1I	CMGCKG	3 cut(s)	508, 1280, 1309
MspCI	CTTAAG	2 cut(s)	1319, 1363
MspI	CCGG	4 cut(s)	39, 279, 307, 1555
MspR9I	CCNGG	3 cut(s)	223, 1556, 2181
MunI	CAATTG	2 cut(s)	1247, 1443
Mva1269I	GAATGC	2 cut(s)	564, 1944
MvaI	CCWGG	2 cut(s)	223, 2181
MvnI	CGCG	1 cut(s)	1280
MwoI	GCNNNNNNNGC	7 cut(s)	39, 275, 451, 553, 580, 845, 1121
NaeI	GCCGGC	1 cut(s)	280
NciI	CCSGG	1 cut(s)	1556
NdeI	CATATG	1 cut(s)	1734
NgoMIV	GCCGGC	1 cut(s)	278
NheI	GCTAGC	1 cut(s)	610
NlaIII	CATG	8 cut(s)	587, 601, 653, 698, 739, 878, 1614, 1832
NlaIV	GGNNCC	3 cut(s)	635, 915, 1299
NmeAIII	GCCGAG	2 cut(s)	285, 321
NmuCI	GTSAC	1 cut(s)	415
NsbI	TGCGCA	1 cut(s)	2057
NsiI	ATGCAT	1 cut(s)	1629
NspI	RCATGY	2 cut(s)	587, 739
PaeI	GCATGC	1 cut(s)	587
PagI	TCATGA	1 cut(s)	1828
PaqCI	CACCTGC	1 cut(s)	901
PceI	AGGCCT	1 cut(s)	426
PcsI	WCGNNNNNNNCGW	2 cut(s)	1663, 1699
PctI	GAATGC	2 cut(s)	564, 1944
PdiI	GCCGGC	1 cut(s)	280
PdmI	GAANNNNTTC	2 cut(s)	437, 1008
PfeI	GAWTC	7 cut(s)	84, 174, 824, 1061, 1787, 1823, 2197
PflMI	CCANNNNNTGG	1 cut(s)	2180
PkrI	GCNGC	9 cut(s)	277, 453, 510, 616, 1123, 1140, 1257, 1315, 1701
PleI	GAGTC	8 cut(s)	83, 270, 400, 412, 965, 1097, 1248, 2085
PpsI	GAGTC	8 cut(s)	83, 270, 400, 412, 965, 1097, 1248, 2085
Ppu21I	YACGTR	1 cut(s)	1154
PpuMI	RGGWCCY	1 cut(s)	249
Psp124BI	GAGCTC	1 cut(s)	468
Psp5II	RGGWCCY	1 cut(s)	249
Psp6I	CCWGG	2 cut(s)	221, 2179
PspFI	CCCAGC	1 cut(s)	149
PspGI	CCWGG	2 cut(s)	221, 2179
PspN4I	GGNNCC	3 cut(s)	635, 915, 1299
PspPI	GGNCC	4 cut(s)	249, 1297, 1509, 1614
PspPPI	RGGWCCY	1 cut(s)	249
PsrI	GAACNNNNNNTAC	2 cut(s)	2027, 2059
PstI	CTGCAG	1 cut(s)	271
PsuI	RGATCY	4 cut(s)	160, 633, 923, 1082
PvuII	CAGCTG	2 cut(s)	508, 1309
RsaI	GTAC	7 cut(s)	305, 732, 1152, 1413, 1550, 1865, 2045
RsaNI	GTAC	7 cut(s)	304, 731, 1151, 1412, 1549, 1864, 2044
RseI	CAYNNNNRTG	1 cut(s)	1659
SacI	GAGCTC	1 cut(s)	468
SacII	CCGCGG	1 cut(s)	1281
SaqAI	TTAA	6 cut(s)	513, 1320, 1364, 1392, 1836, 1868
SatI	GCNGC	9 cut(s)	276, 452, 509, 615, 1122, 1139, 1256, 1314, 1700
Sau96I	GGNCC	4 cut(s)	249, 1297, 1509, 1614
ScaI	AGTACT	2 cut(s)	1550, 1865
SchI	GAGTC	8 cut(s)	83, 271, 401, 412, 965, 1097, 1249, 2086
ScrFI	CCNGG	3 cut(s)	223, 1556, 2181
SduI	GDGCHC	4 cut(s)	69, 468, 1542, 2089
SexAI	ACCWGGT	1 cut(s)	221
SfaNI	GCATC	8 cut(s)	521, 801, 1032, 1242, 1359, 1614, 1636, 2100
SfcI	CTRYAG	2 cut(s)	267, 1326
Sfr303I	CCGCGG	1 cut(s)	1281
SgrAI	CRCCGGYG	1 cut(s)	38
SgrBI	CCGCGG	1 cut(s)	1281
SinI	GGWCC	2 cut(s)	249, 1297
SmiMI	CAYNNNNRTG	1 cut(s)	1659
SmlI	CTYRAG	4 cut(s)	420, 1319, 1363, 1580
SmoI	CTYRAG	4 cut(s)	420, 1319, 1363, 1580
SphI	GCATGC	1 cut(s)	587
SseBI	AGGCCT	1 cut(s)	426
SsiI	CCGC	8 cut(s)	211, 276, 359, 452, 501, 1255, 1278, 1280
SspI	AATATT	1 cut(s)	1568
SspMI	CTAG	3 cut(s)	611, 1353, 2148
SstI	GAGCTC	1 cut(s)	468
StuI	AGGCCT	1 cut(s)	426
StyD4I	CCNGG	3 cut(s)	221, 1554, 2179
StyI	CCWWGG	3 cut(s)	917, 937, 1415
TaaI	ACNGT	4 cut(s)	415, 1017, 1518, 2205
TaiI	ACGT	2 cut(s)	955, 1156
TaqI	TCGA	4 cut(s)	54, 87, 883, 2033
TatI	WGTACW	3 cut(s)	1548, 1863, 2043
TauI	GCSGC	3 cut(s)	278, 454, 1258
TfiI	GAWTC	7 cut(s)	84, 174, 824, 1061, 1787, 1823, 2197
Tru1I	TTAA	6 cut(s)	513, 1320, 1364, 1392, 1836, 1868
Tru9I	TTAA	6 cut(s)	513, 1320, 1364, 1392, 1836, 1868
TscAI	CASTG	4 cut(s)	1188, 1229, 1626, 1987
TseFI	GTSAC	1 cut(s)	415
TseI	GCWGC	6 cut(s)	508, 614, 1121, 1138, 1313, 1699
Tsp45I	GTSAC	1 cut(s)	415
TspDTI	ATGAA	5 cut(s)	130, 652, 764, 1365, 1949
TspGWI	ACGGA	2 cut(s)	339, 758
TspRI	CASTG	4 cut(s)	1188, 1229, 1626, 1987
Van91I	CCANNNNNTGG	1 cut(s)	2180
Vha464I	CTTAAG	2 cut(s)	1319, 1363
VpaK11BI	GGWCC	2 cut(s)	249, 1297
XapI	RAATTY	2 cut(s)	232, 2018
XbaI	TCTAGA	1 cut(s)	1352
XceI	RCATGY	2 cut(s)	587, 739
XcmI	CCANNNNNNNNNTGG	3 cut(s)	328, 403, 647
XmiI	GTMKAC	1 cut(s)	1101
XmnI	GAANNNNTTC	2 cut(s)	437, 1008
XspI	CTAG	3 cut(s)	611, 1353, 2148
ZrmI	AGTACT	2 cut(s)	1550, 1865
Zsp2I	ATGCAT	1 cut(s)	1629

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.