Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0007962

Physical Location & Seq

Genomic Coordinates Forward (+)

13614169 .. 13619108

Gene Structure 4940 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000011897

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2214 bp

ATGCTACACGAGTTGTTACTTGCACTACTGGGCTACACCGGCGATCTCATAATCGACGAGAGGGAGCACTCCACCTCTCTCGGAATCGACTCCCCCATTTCCGACCACCCTACTTTCAACCTCGCTCCCGACATCTCCTTCATCCAACCCAGCGAAAGGGATCTCATACAGAGAATCATCACCTTAGGGTTTTATTATAGAGAGCTTGACCGCTTCGCCACCAGGTCTCGGAATTTGAGCTGGATAAGGTCCGCAAAGCCAGGTCCTGCAGTCGCCGCCGGCAAAATTGAGAAGCCGAGTGTGTACCGGAGAGCCATTGCCAACGGAATTGTGGAGATAATCTCGGTTTATAGGTCGGCGGTTCTTCACATTGAGCAGAAATTGTTGGCAGAGTCCATTCCCATACTGGCAACTGTGACTCAAGGCCTCACTAAGTTTTTCGTGCTTTTGCCGCCGTTGTATGAGCTCATACTGGAGATTGAGAGGGATGACATTCGTGGCGGTCAGCTGCTTAATCTGTTGCATAAAAGATGCCATTGTGGAGTGCCGGAGTTGCAAACCTGCATTCAGAGGCTTCTCTGGCATGCACATCAGGTCATGTATAACCAGCTAGCAGCATGGATGGTGTATGGGATCCTCCAAGACCAGCATGGAGAGTTTTTCATTAGGAGGATGGAAGACAAGGATGTAGAGCATGGCTCATCTCATCAAGACATATCTGAAAAGTTGGCACGCATGTCAACGGACGATACATCAGATTGGCACTTGGGATTTCATATCTATTTGGATATGCTTCCCGAATATATCCAGATGCGTGTTGCAGAATCAGTATTGTTTTCTGGCAAGGCCATCAGGGTTCTTCGCAATCCAAGTCATGCCTTTCGATTTCAGGATGATGTTTTACATCAGCAGGTGCCAAGGGGATCTCATAAAATCCAAGGATTTTCAGGACGTTTCCCATTTCACAAAGACCCTTTTGTTGAGAAAGAGTTGATTGGAGAAGAAATGCTTCCACAGTCTGAGGCCGATAAGATTGAAACTATGCTTTTGGAACTAAAGGAATCATCTGAGTTCCACAAAAGATCCTTTGAATGTGCAGTAGACTCAATACGGGCTATTGCTGCCAGCCATCTTTGGCAGCTTGTGGTTGTGCGTGCTGACTTGAATGGTCATCTAAAGGCACTGAAAGACTATTTTCTGTTAGCAAAAGGAGATTTCTTTCAGTGTTTTCTTGAAGAGAGTCGCCAATTGATGCAGCTACCTCCTCGCCAGTCTACTGCAGAGGCTGATCTTATGGTCCCTTTCCAGCTGGCTGCTCTTAAGACTATAGGTGAGGAAGACAAACATTTCTCTAGAGTATCCTTAAGGATGCCTTCATTTGGGATGGCTATTAAATCTTCCCAAGTAGATGTACCAAGGACAGATGGGAGTTCAGGCGCTTTACAATCAATTGCTTCTTCAGATATAACCCTTGATGGTTGGGATGGGATCGCTCTTGAATACTTCGTTGATTGGCCCTTACAGTTGTTCTTTACCCCCGAAGTGCTCTCTAAGTACTGCCGGGTTTTCCAATATTTGCTAAGGCTCAAGCGAACACAAATGGAGTTGGAGAAATCATGGGCCTCTGTGATGCATCAGGATCACACAGATTTTGCCACACATCGGAATGATCGTGTAAACTGCTCAGTATCACAACAGCGAAGGCAGCGAAGTAGACCAATGTGGCGTATTAGAGAGCATATGGCTTTCTTGATCAGAAATCTTCAATTTTATATACAGGTGGATGTGATAGAATCCCAATGGAATGTTTTGCAAGCTCATATCCAAGATTCTCATGACTTTAATGGACTTGTAGGCGTCCATCTGGAGTACTTAAACGCTCTAATTTCACAATCGTTCTTGGACATTGGCTCTTTATCAAGAATACTTGACAGCATAATGAAACTTTGCATTCGGTTCTGCTGGAACATTGAGAACCAAGAAAGCAGTGCAAATACATCTGAATTGGAACATATTATAGAGGAATTCAACAAGAAATCGAACTCCCTGTATACGATACTGCGCAGTAGTAGGCTTGTAGGGAGTCAGCGAGCCCCATTTCTTAGACGTTTTCTGATGCGTCTGAACTTCAATTCCTTCTTTGAGGCGACAGCTAGAGGTGTGCTGAATGTTGTTAGACCACGCCCTGCAGTTTCTGTTTTGAATCAACAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000226 GO:0000278 GO:0000280 GO:0000923 GO:0000930 GO:0003674 GO:0005198 GO:0005200 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005815 GO:0005819 GO:0005856 GO:0005911 GO:0006996 GO:0007010 GO:0007017 GO:0007020 GO:0007049 GO:0007051 GO:0007052 GO:0008092 GO:0008150 GO:0009506 GO:0009605 GO:0009607 GO:0009624 GO:0009987 GO:0015630 GO:0015631 GO:0016043 GO:0022402 GO:0022414 GO:0022607 GO:0030054 GO:0030865 GO:0031109 GO:0031122 GO:0032153 GO:0032155 GO:0032991 GO:0034622 GO:0040007 GO:0043015 GO:0043207 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043622 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044450 GO:0044464 GO:0046785 GO:0048285 GO:0050896 GO:0051225 GO:0051258 GO:0051321 GO:0051415 GO:0051418 GO:0051704 GO:0051707 GO:0055044 GO:0065003 GO:0070925 GO:0071840 GO:0090307 GO:0097435 GO:0140014 GO:1902850 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Spc97_Spc98

Protein Analysis

738

Amino Acids

84.96

Weight (kDa)

6.5

Isoelectric Point (pI)

53.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GCP_N_terminal	PF17681	2 - 383	3.3e-46	Gamma tubulin complex component N-terminal
GCP_C_terminal	PF04130	388 - 714	2.4e-56	Gamma tubulin complex component C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007962)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53760 AT3G53760 AT3G53760
fragaria_vesca	FvH4_2g25810 FvH4_2g25810 FvH4_2g25810 FvH4_2g25810 FvH4_2g25810
malus_domestica	MD03G1288900.v1.1
prunus_persica	Prupe.8G262200_v2.0.a1 Prupe.8G262200_v2.0.a1
pyrus_communis	pycom03g22900 pycom11g27030
rosa_chinensis	RchiOBHm_Chr6g0294121
rosa_laevigata	RLG00000011897
rosa_multiflora	Rmu_sc0005037.1_g000009
rosa_roxburghii	Rroxscaffold_7G00173630
rosa_rugosa	Rorug06G0241400 Rorug06G0241500 Rorug06G0241600 Rorug06G0241700
rosa_samantha	Rh6AG354000 Rh6DG354800
rosa_wichuraiana	Rw6G030850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	901
Acc16I	TGCGCA	1 cut(s)	2063
Acc36I	ACCTGC	2 cut(s)	569, 901
AccB1I	GGYRCC	1 cut(s)	913
AccI	GTMKAC	4 cut(s)	1101, 1274, 1714, 2051
AciI	CCGC	6 cut(s)	211, 252, 276, 359, 452, 501
AclWI	GGATC	7 cut(s)	168, 628, 641, 931, 1077, 1496, 1647
AcsI	RAATTY	2 cut(s)	232, 2024
AcuI	CTGAAG	1 cut(s)	1443
AcyI	GRCGYC	1 cut(s)	1857
AfaI	GTAC	4 cut(s)	305, 1413, 1556, 1871
AfiI	CCNNNNNNNGG	4 cut(s)	156, 228, 1379, 1662
AflII	CTTAAG	2 cut(s)	1319, 1363
AjnI	CCWGG	2 cut(s)	221, 259
AloI	GAACNNNNNNTCC	2 cut(s)	2117, 2149
Alw21I	GWGCWC	3 cut(s)	69, 468, 1548
Alw26I	GTCTC	1 cut(s)	231
AlwI	GGATC	7 cut(s)	168, 628, 641, 931, 1077, 1496, 1647
AlwNI	CAGNNNCTG	3 cut(s)	266, 1286, 2195
AoxI	GGCC	5 cut(s)	424, 846, 1023, 1514, 1620
ApeKI	GCWGC	7 cut(s)	508, 614, 1121, 1138, 1255, 1313, 1705
ApoI	RAATTY	2 cut(s)	232, 2024
Asp700I	GAANNNNTTC	1 cut(s)	1008
AspLEI	GCGC	2 cut(s)	1439, 2064
AspS9I	GGNCC	5 cut(s)	249, 263, 1297, 1515, 1620
AsuC2I	CCSGG	1 cut(s)	1562
AsuHPI	GGTGA	2 cut(s)	172, 1343
AsuNHI	GCTAGC	1 cut(s)	610
AvaII	GGWCC	3 cut(s)	249, 263, 1297
AxyI	CCTNAGG	1 cut(s)	184
BamHI	GGATCC	1 cut(s)	633
BanI	GGYRCC	1 cut(s)	913
BanII	GRGCYC	2 cut(s)	468, 2095
BauI	CACGAG	1 cut(s)	8
BbsI	GAAGAC	2 cut(s)	684, 1344
Bbv12I	GWGCWC	3 cut(s)	69, 468, 1548
BbvI	GCAGC	7 cut(s)	495, 626, 1108, 1150, 1267, 1300, 1717
BccI	CCATC	9 cut(s)	616, 667, 857, 1137, 1378, 1418, 1469, 1478, 1869
BceAI	ACGGC	1 cut(s)	439
BciT130I	CCWGG	2 cut(s)	223, 261
BciVI	GTATCC	1 cut(s)	1369
BclI	TGATCA	1 cut(s)	1752
BcnI	CCSGG	1 cut(s)	1562
BcoDI	GTCTC	1 cut(s)	231
BfaI	CTAG	3 cut(s)	611, 1353, 2154
BfmI	CTRYAG	4 cut(s)	267, 1278, 1326, 2187
BfoI	RGCGCY	1 cut(s)	1440
BfrI	CTTAAG	2 cut(s)	1319, 1363
BfuAI	ACCTGC	2 cut(s)	569, 901
BfuI	GTATCC	1 cut(s)	1369
BisI	GCNGC	9 cut(s)	276, 452, 509, 615, 1122, 1139, 1256, 1314, 1706
BlsI	GCNGC	9 cut(s)	277, 453, 510, 616, 1123, 1140, 1257, 1315, 1707
BmcAI	AGTACT	2 cut(s)	1556, 1871
Bme1390I	CCNGG	3 cut(s)	223, 261, 1562
Bme18I	GGWCC	3 cut(s)	249, 263, 1297
BmgT120I	GGNCC	5 cut(s)	249, 263, 1297, 1515, 1620
BmiI	GGNNCC	3 cut(s)	635, 915, 1299
BmrFI	CCNGG	3 cut(s)	223, 261, 1562
BmrI	ACTGGG	1 cut(s)	38
BmsI	GCATC	7 cut(s)	521, 801, 1242, 1359, 1620, 1642, 2106
BmtI	GCTAGC	1 cut(s)	614
BmuI	ACTGGG	1 cut(s)	38
BpiI	GAAGAC	2 cut(s)	684, 1344
BplI	GAGNNNNNCTC	4 cut(s)	326, 358, 683, 715
BpmI	CTGGAG	2 cut(s)	494, 1886
Bpu10I	CCTNAGC	1 cut(s)	1580
BpuEI	CTTGAG	2 cut(s)	405, 1571
BpuMI	CCSGG	1 cut(s)	1562
BsaHI	GRCGYC	1 cut(s)	1857
BsaI	GGTCTC	1 cut(s)	231
BsaJI	CCNNGG	3 cut(s)	917, 937, 1415
BsaWI	WCCGGW	1 cut(s)	306
Bsc4I	CCNNNNNNNGG	4 cut(s)	156, 228, 1379, 1662
Bse118I	RCCGGY	2 cut(s)	38, 278
Bse1I	ACTGG	4 cut(s)	33, 411, 477, 1270
Bse21I	CCTNAGG	1 cut(s)	184
Bse3DI	GCAATG	1 cut(s)	315
BseBI	CCWGG	2 cut(s)	223, 261
BseDI	CCNNGG	3 cut(s)	917, 937, 1415
BseLI	CCNNNNNNNGG	4 cut(s)	156, 228, 1379, 1662
BseMI	GCAATG	1 cut(s)	315
BseMII	CTCAG	3 cut(s)	1011, 1059, 1698
BseNI	ACTGG	4 cut(s)	33, 411, 477, 1270
BseRI	GAGGAG	1 cut(s)	1254
BseXI	GCAGC	7 cut(s)	495, 626, 1108, 1150, 1267, 1300, 1717
BseYI	CCCAGC	1 cut(s)	149
BsgI	GTGCAG	1 cut(s)	1116
BshFI	GGCC	5 cut(s)	426, 848, 1025, 1516, 1622
BshNI	GGYRCC	1 cut(s)	913
BsiHKAI	GWGCWC	3 cut(s)	69, 468, 1548
BsiSI	CCGG	5 cut(s)	39, 279, 307, 548, 1561
BslFI	GGGAC	1 cut(s)	1283
BslI	CCNNNNNNNGG	4 cut(s)	156, 228, 1379, 1662
BsmAI	GTCTC	1 cut(s)	231
BsmFI	GGGAC	1 cut(s)	1283
BsmI	GAATGC	2 cut(s)	564, 1950
BsnI	GGCC	5 cut(s)	426, 848, 1025, 1516, 1622
Bso31I	GGTCTC	1 cut(s)	231
Bsp1286I	GDGCHC	4 cut(s)	69, 468, 1548, 2095
BspACI	CCGC	6 cut(s)	211, 252, 276, 359, 452, 501
BspANI	GGCC	5 cut(s)	426, 848, 1025, 1516, 1622
BspCNI	CTCAG	3 cut(s)	1012, 1060, 1697
BspHI	TCATGA	1 cut(s)	1834
BspLI	GGNNCC	3 cut(s)	635, 915, 1299
BspMAI	CTGCAG	3 cut(s)	271, 1282, 2191
BspMI	ACCTGC	2 cut(s)	569, 901
BspOI	GCTAGC	1 cut(s)	614
BspPI	GGATC	7 cut(s)	168, 628, 641, 931, 1077, 1496, 1647
BspT107I	GGYRCC	1 cut(s)	913
BspTI	CTTAAG	2 cut(s)	1319, 1363
BspTNI	GGTCTC	1 cut(s)	231
BsrDI	GCAATG	1 cut(s)	315
BsrFI	RCCGGY	2 cut(s)	38, 278
BsrI	ACTGG	4 cut(s)	33, 411, 477, 1270
BssAI	RCCGGY	2 cut(s)	38, 278
BssECI	CCNNGG	3 cut(s)	917, 937, 1415
BssNAI	GTATAC	1 cut(s)	2052
BssNI	GRCGYC	1 cut(s)	1857
BssSI	CACGAG	1 cut(s)	8
BssT1I	CCWWGG	3 cut(s)	917, 937, 1415
Bst1107I	GTATAC	1 cut(s)	2052
Bst2BI	CACGAG	1 cut(s)	8
Bst2UI	CCWGG	2 cut(s)	223, 261
Bst4CI	ACNGT	4 cut(s)	415, 1017, 1524, 2211
Bst6I	CTCTTC	1 cut(s)	1230
BstACI	GRCGYC	1 cut(s)	1857
BstAFI	CTTAAG	2 cut(s)	1319, 1363
BstC8I	GCNNGC	9 cut(s)	280, 585, 612, 733, 1126, 1155, 1311, 1815, 2091
BstDEI	CTNAG	8 cut(s)	184, 432, 1020, 1068, 1551, 1580, 1684, 2102
BstH2I	RGCGCY	1 cut(s)	1440
BstHHI	GCGC	2 cut(s)	1439, 2064
BstMAI	GTCTC	1 cut(s)	231
BstMWI	GCNNNNNNNGC	7 cut(s)	39, 275, 451, 553, 580, 1121, 1705
BstNI	CCWGG	2 cut(s)	223, 261
BstNSI	RCATGY	2 cut(s)	587, 739
BstSCI	CCNGG	3 cut(s)	221, 259, 1560
BstSFI	CTRYAG	4 cut(s)	267, 1278, 1326, 2187
BstV1I	GCAGC	7 cut(s)	495, 626, 1108, 1150, 1267, 1300, 1717
BstV2I	GAAGAC	2 cut(s)	684, 1344
BstX2I	RGATCY	4 cut(s)	160, 633, 923, 1082
BstYI	RGATCY	4 cut(s)	160, 633, 923, 1082
BstZ17I	GTATAC	1 cut(s)	2052
Bsu36I	CCTNAGG	1 cut(s)	184
BsuI	GTATCC	1 cut(s)	1369
BsuRI	GGCC	5 cut(s)	426, 848, 1025, 1516, 1622
BtsI	GCAGTG	1 cut(s)	1993
BtsIMutI	CAGTG	3 cut(s)	1181, 1229, 1993
BveI	ACCTGC	2 cut(s)	569, 901
Cac8I	GCNNGC	9 cut(s)	280, 585, 612, 733, 1126, 1155, 1311, 1815, 2091
CaiI	CAGNNNCTG	3 cut(s)	266, 1286, 2195
CciI	TCATGA	1 cut(s)	1834
CfoI	GCGC	2 cut(s)	1439, 2064
Cfr10I	RCCGGY	2 cut(s)	38, 278
Cfr13I	GGNCC	5 cut(s)	249, 263, 1297, 1515, 1620
CseI	GACGC	2 cut(s)	1846, 2108
CsiI	ACCWGGT	1 cut(s)	221
Csp6I	GTAC	4 cut(s)	304, 1412, 1555, 1870
CviAII	CATG	9 cut(s)	584, 598, 618, 650, 695, 736, 875, 1617, 1835
CviQI	GTAC	4 cut(s)	304, 1412, 1555, 1870
DdeI	CTNAG	8 cut(s)	184, 432, 1020, 1068, 1551, 1580, 1684, 2102
Eam1104I	CTCTTC	1 cut(s)	1230
EarI	CTCTTC	1 cut(s)	1230
Ecl136II	GAGCTC	1 cut(s)	466
Eco130I	CCWWGG	3 cut(s)	917, 937, 1415
Eco147I	AGGCCT	1 cut(s)	426
Eco24I	GRGCYC	2 cut(s)	468, 2095
Eco31I	GGTCTC	1 cut(s)	231
Eco47I	GGWCC	3 cut(s)	249, 263, 1297
Eco53kI	GAGCTC	1 cut(s)	466
Eco57I	CTGAAG	1 cut(s)	1443
Eco81I	CCTNAGG	1 cut(s)	184
EcoICRI	GAGCTC	1 cut(s)	466
EcoO109I	RGGNCCY	1 cut(s)	263
EcoRI	GAATTC	1 cut(s)	2024
EcoRII	CCWGG	2 cut(s)	221, 259
EcoT14I	CCWWGG	3 cut(s)	917, 937, 1415
EcoT22I	ATGCAT	1 cut(s)	1635
EcoT38I	GRGCYC	2 cut(s)	468, 2095
ErhI	CCWWGG	3 cut(s)	917, 937, 1415
FaeI	CATG	9 cut(s)	587, 601, 621, 653, 698, 739, 878, 1620, 1838
FalI	AAGNNNNNCTT	4 cut(s)	993, 1025, 1357, 1389
FaqI	GGGAC	1 cut(s)	1283
FatI	CATG	9 cut(s)	583, 597, 617, 649, 694, 735, 874, 1616, 1834
FauNDI	CATATG	1 cut(s)	1740
FbaI	TGATCA	1 cut(s)	1752
FblI	GTMKAC	4 cut(s)	1101, 1274, 1714, 2051
Fnu4HI	GCNGC	9 cut(s)	276, 452, 509, 615, 1122, 1139, 1256, 1314, 1706
FriOI	GRGCYC	2 cut(s)	468, 2095
Fsp4HI	GCNGC	9 cut(s)	276, 452, 509, 615, 1122, 1139, 1256, 1314, 1706
FspBI	CTAG	3 cut(s)	611, 1353, 2154
FspI	TGCGCA	1 cut(s)	2063
GlaI	GCGC	2 cut(s)	1438, 2063
GluI	GCNGC	9 cut(s)	276, 452, 509, 615, 1122, 1139, 1256, 1314, 1706
GsaI	CCCAGC	1 cut(s)	153
GsuI	CTGGAG	2 cut(s)	494, 1886
HaeII	RGCGCY	1 cut(s)	1440
HaeIII	GGCC	5 cut(s)	426, 848, 1025, 1516, 1622
HapII	CCGG	5 cut(s)	39, 279, 307, 548, 1561
HgaI	GACGC	2 cut(s)	1846, 2108
HhaI	GCGC	2 cut(s)	1439, 2064
Hin1I	GRCGYC	1 cut(s)	1857
Hin1II	CATG	9 cut(s)	587, 601, 621, 653, 698, 739, 878, 1620, 1838
Hin6I	GCGC	2 cut(s)	1437, 2062
HinP1I	GCGC	2 cut(s)	1437, 2062
HincII	GTYRAC	1 cut(s)	741
HindII	GTYRAC	1 cut(s)	741
HpaII	CCGG	5 cut(s)	39, 279, 307, 548, 1561
HphI	GGTGA	2 cut(s)	172, 1343
Hpy166II	GTNNAC	7 cut(s)	304, 741, 1102, 1275, 1678, 1715, 2052
Hpy8I	GTNNAC	7 cut(s)	304, 741, 1102, 1275, 1678, 1715, 2052
Hpy99I	CGWCG	1 cut(s)	59
HpyAV	CCTTC	4 cut(s)	148, 1383, 1695, 2146
HpyCH4III	ACNGT	4 cut(s)	415, 1017, 1524, 2211
HpyCH4IV	ACGT	2 cut(s)	952, 2107
HpyF10VI	GCNNNNNNNGC	7 cut(s)	39, 275, 451, 553, 580, 1121, 1705
HpyF3I	CTNAG	8 cut(s)	184, 432, 1020, 1068, 1551, 1580, 1684, 2102
HpySE526I	ACGT	2 cut(s)	952, 2107
Hsp92I	GRCGYC	1 cut(s)	1857
Hsp92II	CATG	9 cut(s)	587, 601, 621, 653, 698, 739, 878, 1620, 1838
HspAI	GCGC	2 cut(s)	1437, 2062
KroI	GCCGGC	1 cut(s)	278
KroNI	GCCGGC	1 cut(s)	280
Ksp22I	TGATCA	1 cut(s)	1752
LmnI	GCTCC	2 cut(s)	64, 130
Lsp1109I	GCAGC	7 cut(s)	495, 626, 1108, 1150, 1267, 1300, 1717
LweI	GCATC	7 cut(s)	521, 801, 1242, 1359, 1620, 1642, 2106
MabI	ACCWGGT	1 cut(s)	221
MaeI	CTAG	3 cut(s)	611, 1353, 2154
MaeII	ACGT	2 cut(s)	952, 2107
MaeIII	GTNAC	2 cut(s)	15, 415
MboII	GAAGA	9 cut(s)	356, 689, 851, 1013, 1247, 1349, 1389, 1449, 1754
MfeI	CAATTG	2 cut(s)	1247, 1449
MflI	RGATCY	4 cut(s)	160, 633, 923, 1082
MhlI	GDGCHC	4 cut(s)	69, 468, 1548, 2095
MlyI	GAGTC	6 cut(s)	83, 401, 412, 1097, 1249, 2092
MmeI	TCCRAC	3 cut(s)	126, 169, 1587
Mph1103I	ATGCAT	1 cut(s)	1635
MroNI	GCCGGC	1 cut(s)	278
MroXI	GAANNNNTTC	1 cut(s)	1008
MseI	TTAA	6 cut(s)	513, 1320, 1364, 1392, 1842, 1874
MslI	CAYNNNNRTG	1 cut(s)	1665
MspA1I	CMGCKG	2 cut(s)	508, 1309
MspCI	CTTAAG	2 cut(s)	1319, 1363
MspI	CCGG	5 cut(s)	39, 279, 307, 548, 1561
MspR9I	CCNGG	3 cut(s)	223, 261, 1562
MunI	CAATTG	2 cut(s)	1247, 1449
Mva1269I	GAATGC	2 cut(s)	564, 1950
MvaI	CCWGG	2 cut(s)	223, 261
MwoI	GCNNNNNNNGC	7 cut(s)	39, 275, 451, 553, 580, 1121, 1705
NaeI	GCCGGC	1 cut(s)	280
NciI	CCSGG	1 cut(s)	1562
NdeI	CATATG	1 cut(s)	1740
NgoMIV	GCCGGC	1 cut(s)	278
NheI	GCTAGC	1 cut(s)	610
NlaIII	CATG	9 cut(s)	587, 601, 621, 653, 698, 739, 878, 1620, 1838
NlaIV	GGNNCC	3 cut(s)	635, 915, 1299
NmeAIII	GCCGAG	1 cut(s)	321
NmuCI	GTSAC	1 cut(s)	415
NsbI	TGCGCA	1 cut(s)	2063
NsiI	ATGCAT	1 cut(s)	1635
NspI	RCATGY	2 cut(s)	587, 739
PaeI	GCATGC	1 cut(s)	587
PagI	TCATGA	1 cut(s)	1834
PaqCI	CACCTGC	1 cut(s)	901
PceI	AGGCCT	1 cut(s)	426
PcsI	WCGNNNNNNNCGW	1 cut(s)	1669
PctI	GAATGC	2 cut(s)	564, 1950
PdiI	GCCGGC	1 cut(s)	280
PdmI	GAANNNNTTC	1 cut(s)	1008
PfeI	GAWTC	7 cut(s)	84, 174, 824, 1061, 1793, 1829, 2203
PkrI	GCNGC	9 cut(s)	277, 453, 510, 616, 1123, 1140, 1257, 1315, 1707
PleI	GAGTC	6 cut(s)	83, 400, 412, 1097, 1248, 2091
PpsI	GAGTC	6 cut(s)	83, 400, 412, 1097, 1248, 2091
PpuMI	RGGWCCY	1 cut(s)	263
Psp124BI	GAGCTC	1 cut(s)	468
Psp5II	RGGWCCY	1 cut(s)	263
Psp6I	CCWGG	2 cut(s)	221, 259
PspFI	CCCAGC	1 cut(s)	149
PspGI	CCWGG	2 cut(s)	221, 259
PspN4I	GGNNCC	3 cut(s)	635, 915, 1299
PspPI	GGNCC	5 cut(s)	249, 263, 1297, 1515, 1620
PspPPI	RGGWCCY	1 cut(s)	263
PstI	CTGCAG	3 cut(s)	271, 1282, 2191
PstNI	CAGNNNCTG	3 cut(s)	266, 1286, 2195
PsuI	RGATCY	4 cut(s)	160, 633, 923, 1082
PvuII	CAGCTG	2 cut(s)	508, 1309
RsaI	GTAC	4 cut(s)	305, 1413, 1556, 1871
RsaNI	GTAC	4 cut(s)	304, 1412, 1555, 1870
RseI	CAYNNNNRTG	1 cut(s)	1665
SacI	GAGCTC	1 cut(s)	468
SaqAI	TTAA	6 cut(s)	513, 1320, 1364, 1392, 1842, 1874
SatI	GCNGC	9 cut(s)	276, 452, 509, 615, 1122, 1139, 1256, 1314, 1706
Sau96I	GGNCC	5 cut(s)	249, 263, 1297, 1515, 1620
ScaI	AGTACT	2 cut(s)	1556, 1871
SchI	GAGTC	6 cut(s)	83, 401, 412, 1097, 1249, 2092
ScrFI	CCNGG	3 cut(s)	223, 261, 1562
SduI	GDGCHC	4 cut(s)	69, 468, 1548, 2095
SexAI	ACCWGGT	1 cut(s)	221
SfaNI	GCATC	7 cut(s)	521, 801, 1242, 1359, 1620, 1642, 2106
SfcI	CTRYAG	4 cut(s)	267, 1278, 1326, 2187
SgrAI	CRCCGGYG	1 cut(s)	38
SinI	GGWCC	3 cut(s)	249, 263, 1297
SmiMI	CAYNNNNRTG	1 cut(s)	1665
SmlI	CTYRAG	4 cut(s)	420, 1319, 1363, 1586
SmoI	CTYRAG	4 cut(s)	420, 1319, 1363, 1586
SphI	GCATGC	1 cut(s)	587
SseBI	AGGCCT	1 cut(s)	426
SsiI	CCGC	6 cut(s)	211, 252, 276, 359, 452, 501
SspI	AATATT	1 cut(s)	1574
SspMI	CTAG	3 cut(s)	611, 1353, 2154
SstI	GAGCTC	1 cut(s)	468
StuI	AGGCCT	1 cut(s)	426
StyD4I	CCNGG	3 cut(s)	221, 259, 1560
StyI	CCWWGG	3 cut(s)	917, 937, 1415
TaaI	ACNGT	4 cut(s)	415, 1017, 1524, 2211
TaiI	ACGT	2 cut(s)	955, 2110
TaqI	TCGA	4 cut(s)	54, 87, 883, 2039
TatI	WGTACW	2 cut(s)	1554, 1869
TauI	GCSGC	2 cut(s)	278, 454
TfiI	GAWTC	7 cut(s)	84, 174, 824, 1061, 1793, 1829, 2203
Tru1I	TTAA	6 cut(s)	513, 1320, 1364, 1392, 1842, 1874
Tru9I	TTAA	6 cut(s)	513, 1320, 1364, 1392, 1842, 1874
TscAI	CASTG	3 cut(s)	1188, 1229, 1993
TseFI	GTSAC	1 cut(s)	415
TseI	GCWGC	7 cut(s)	508, 614, 1121, 1138, 1255, 1313, 1705
Tsp45I	GTSAC	1 cut(s)	415
TspDTI	ATGAA	5 cut(s)	130, 652, 764, 1365, 1955
TspGWI	ACGGA	2 cut(s)	339, 758
TspRI	CASTG	3 cut(s)	1188, 1229, 1993
Vha464I	CTTAAG	2 cut(s)	1319, 1363
VpaK11BI	GGWCC	3 cut(s)	249, 263, 1297
XapI	RAATTY	2 cut(s)	232, 2024
XbaI	TCTAGA	1 cut(s)	1352
XceI	RCATGY	2 cut(s)	587, 739
XcmI	CCANNNNNNNNNTGG	3 cut(s)	328, 403, 647
XmiI	GTMKAC	4 cut(s)	1101, 1274, 1714, 2051
XmnI	GAANNNNTTC	1 cut(s)	1008
XspI	CTAG	3 cut(s)	611, 1353, 2154
ZrmI	AGTACT	2 cut(s)	1556, 1871
Zsp2I	ATGCAT	1 cut(s)	1635

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.