Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0007962

Physical Location & Seq

Genomic Coordinates Reverse (-)

54908459 .. 54913395

Gene Structure 4937 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G030850.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2166 bp

ATGCTACACGAGTTGTTACTTGCACTACTGGGCTACACCGGCGATCTCATAATCGACGAGAGGGAGCACTCCACCTCTCTCGGAATCGACTCTCCCATTTCCGACCACCCTACTTTCAACCTCGCTCCCGACATATCCTTCATCCAACCCAGCGAAAGGGATCTCATACAGAGAATCATCACCTTAGGGTTTTATTACAGAGAGCTTGACCGCTTCGCCACCAGGTCTCGGAATTTGAGCTGGATAAGGTCCGCAAAGCCGAGTCCTGCAGTCGCCGCCGGCAAAATTGAGAAGCCGAGTGTGTACCGGAGAGCCATTGCCAACGGAATTGTGGAGATACTCTCGGTTTATAGGTCCGCGGTTCTTCACATTGAGCAGAAATTGTTGGCAGAGTCCATTCCCATACTCGCAACTGTGACTCAAGGCCTCACGAAGGTTGGTTTTTCGTGCTTTTGCTGCCGTTGTATGAGCTCATACTGGAGATTGAGAGGGATGACATTCGTGGGTCAGCTGCTTAATCTTTTGCATAAAAGATGCCATTGTGGAGTGCCGGAGTTGCAAACCTGCATTCAGAGGCTTCTCTGGCATGCACATCAGGTCATGTATAACCAGCTAGCAGCATGGATGGTGTATGGGATCCTCCAAGACCAGCATGGAGAGTTTTTCATTAGGAGGATGGAAGATAAGGATGTAGAGCATGGCTCATCTCATCAAGACATATCTGAAAAGTTGGCACGCATGTCAACGGACGATACATCAGATTGGCACTTGGGATTTCATATCTATTTGGATATGCTTCCCGAATATGTCCAGATGCGTGTCGCAGAATCAGTATTGTTTGCTGGCAAGGCCATCAGGGTTCTTCGCAATCCAAGTCATGCCTTTCGATTTCAGGATGATGTTTTACATCGCAGGCGTTTCCCATTTCACAAAGACCCTTTTGTTGAGAAAGAGTTGATTGGAGAAGAAATGCTTCCGCAGTCTGAGGCCGATAAGATTGAAACTATGCTTTTGGAACTAAAGGAATCATCCGAGTTCCACAAAAGATCCTTTGAATGTGCAGTAGACTCAATACGGGCTATTGCTGCCAGCCATCTTTGGCAGCTTGTGGTTGTACGTGCTGACTTGAATGGTCATCTAAAGGCACTGAAAGACTATTTTCTGTTAGCAAAAGGAGATTTCTTTCAGTGTTTTCTTGAAGAGAGTCGCCAATTGATGCGGCTACCTCCTCGCCAGTCAACCGCGGAGGCTGATCTTATGGTCCCTTTCCAGCTGGCTGCTCTTAAGACTATAGGTGAGGAAGACAAACATTTCTCTAGAGTATCCTTAAGGATGCCGTCATTTGGGATGACTATTAAATCTTCCCAAGTAGATGTACCAAGGACAGATGGGAGTTCAGGCGCTTTACAATCAATTGCTTCTTCAGATATAACCCTTGATGGTTGGGATGGGATGCTCTTGAATACTTCGTTGATTGGCCCTTACAGTTGTTCTTTACCCCAGAAGTACTGCCGGGTTTTCCAATATTTGCTAAGGCTCAAGCGAACACAAATGGAGTTGGAGAAATCATGGGCCTCAGTGATGCATCAGGATCACACAGATTTTGCCACACATCGGAATGATCGTGTAAATTGCTCAGTATCACAACAGCGAAGGCAGCGAAGCAGACCAATGTGGCGTATTAGAGAGCATATGGCTTTCTTGATCAGAAATCTTCAATTTTATATACAGGTGGATGTGATAGAATCCCAATGGAATGTTTTGCAAGCTCATATCCAAGATTCTCATGACTTTAATGGACTTGTAGGCGTCCATCTGGAGTACTTAAACGCTCTAATTTCACAATCTTTCTTGGACATTGGCTCTTTATCAAGGATACTTGACAGCATAATGAAACTTTGCATTCGGTTCTGCTGGAACATTGAGAACCAAGAAAGCAGCGCAAATACATCTGAATTGGAACATATTATAGAGGAATTCAACAAGAAATCGAACTCCCTGTACACGATACTGCGCAGTAGTAGGCTTGTAGGGAGTCAGCGAGCCCCATTTCTTAGGCGTTTTCTGATGCGTCTGAACTTCAATTCCTTCTTTGAGGCGACAGCTAGAGGTGTGCTGAATGTTGTTAGACCACGCCCTGCAGTTTCTGTTTTGAATCAACAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000226 GO:0000278 GO:0000280 GO:0000923 GO:0000930 GO:0003674 GO:0005198 GO:0005200 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005815 GO:0005819 GO:0005856 GO:0005911 GO:0006996 GO:0007010 GO:0007017 GO:0007020 GO:0007049 GO:0007051 GO:0007052 GO:0008092 GO:0008150 GO:0009506 GO:0009605 GO:0009607 GO:0009624 GO:0009987 GO:0015630 GO:0015631 GO:0016043 GO:0022402 GO:0022414 GO:0022607 GO:0030054 GO:0030865 GO:0031109 GO:0031122 GO:0032153 GO:0032155 GO:0032991 GO:0034622 GO:0040007 GO:0043015 GO:0043207 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043622 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044450 GO:0044464 GO:0046785 GO:0048285 GO:0050896 GO:0051225 GO:0051258 GO:0051321 GO:0051415 GO:0051418 GO:0051704 GO:0051707 GO:0055044 GO:0065003 GO:0070925 GO:0071840 GO:0090307 GO:0097435 GO:0140014 GO:1902850 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Spc97_Spc98

Protein Analysis

721

Amino Acids

83.11

Weight (kDa)

8.14

Isoelectric Point (pI)

57.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GCP_N_terminal	PF17681	2 - 371	4.2e-40	Gamma tubulin complex component N-terminal
GCP_C_terminal	PF04130	376 - 698	1.3e-43	Gamma tubulin complex component C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007962)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53760 AT3G53760 AT3G53760
fragaria_vesca	FvH4_2g25810 FvH4_2g25810 FvH4_2g25810 FvH4_2g25810 FvH4_2g25810
malus_domestica	MD03G1288900.v1.1
prunus_persica	Prupe.8G262200_v2.0.a1 Prupe.8G262200_v2.0.a1
pyrus_communis	pycom03g22900 pycom11g27030
rosa_chinensis	RchiOBHm_Chr6g0294121
rosa_laevigata	RLG00000011897
rosa_multiflora	Rmu_sc0005037.1_g000009
rosa_roxburghii	Rroxscaffold_7G00173630
rosa_rugosa	Rorug06G0241400 Rorug06G0241500 Rorug06G0241600 Rorug06G0241700
rosa_samantha	Rh6AG354000 Rh6DG354800
rosa_wichuraiana	Rw6G030850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	2015
Acc36I	ACCTGC	1 cut(s)	572
AccI	GTMKAC	1 cut(s)	1065
AccII	CGCG	2 cut(s)	359, 1244
AciI	CCGC	9 cut(s)	211, 252, 276, 357, 359, 977, 1219, 1242, 1244
AclWI	GGATC	5 cut(s)	168, 631, 644, 1041, 1599
AcsI	RAATTY	2 cut(s)	232, 1976
AcuI	CTGAAG	1 cut(s)	1407
AcyI	GRCGYC	1 cut(s)	1809
AfaI	GTAC	6 cut(s)	305, 1116, 1377, 1508, 1823, 2003
AfiI	CCNNNNNNNGG	5 cut(s)	156, 228, 433, 1343, 1614
AflII	CTTAAG	2 cut(s)	1283, 1327
AjnI	CCWGG	1 cut(s)	221
AloI	GAACNNNNNNTCC	2 cut(s)	2069, 2101
AluBI	AGCT	9 cut(s)	205, 240, 471, 511, 613, 1105, 1273, 1769, 2105
AluI	AGCT	9 cut(s)	205, 240, 471, 511, 613, 1105, 1273, 1769, 2105
Alw21I	GWGCWC	2 cut(s)	69, 473
Alw26I	GTCTC	1 cut(s)	231
AlwI	GGATC	5 cut(s)	168, 631, 644, 1041, 1599
AlwNI	CAGNNNCTG	1 cut(s)	2147
AoxI	GGCC	5 cut(s)	424, 849, 987, 1477, 1572
ApeKI	GCWGC	8 cut(s)	456, 511, 617, 1085, 1102, 1277, 1657, 1938
ApoI	RAATTY	2 cut(s)	232, 1976
Asp700I	GAANNNNTTC	1 cut(s)	972
AspLEI	GCGC	3 cut(s)	1403, 1943, 2016
AspS9I	GGNCC	5 cut(s)	249, 354, 1261, 1478, 1572
AsuC2I	CCSGG	1 cut(s)	1514
AsuHPI	GGTGA	2 cut(s)	172, 1307
AsuNHI	GCTAGC	1 cut(s)	613
AvaII	GGWCC	3 cut(s)	249, 354, 1261
AxyI	CCTNAGG	1 cut(s)	184
BamHI	GGATCC	1 cut(s)	636
BanII	GRGCYC	2 cut(s)	473, 2047
BauI	CACGAG	1 cut(s)	8
BbsI	GAAGAC	1 cut(s)	1308
Bbv12I	GWGCWC	2 cut(s)	69, 473
BbvI	GCAGC	8 cut(s)	443, 498, 629, 1072, 1114, 1264, 1669, 1950
BccI	CCATC	8 cut(s)	619, 670, 860, 1101, 1382, 1433, 1442, 1821
BceAI	ACGGC	2 cut(s)	444, 1321
BciT130I	CCWGG	1 cut(s)	223
BciVI	GTATCC	2 cut(s)	1333, 1869
BclI	TGATCA	1 cut(s)	1704
BcnI	CCSGG	1 cut(s)	1514
BcoDI	GTCTC	1 cut(s)	231
BfaI	CTAG	3 cut(s)	614, 1317, 2106
BfmI	CTRYAG	3 cut(s)	267, 1290, 2139
BfoI	RGCGCY	1 cut(s)	1404
BfrI	CTTAAG	2 cut(s)	1283, 1327
BfuAI	ACCTGC	1 cut(s)	572
BfuI	GTATCC	2 cut(s)	1333, 1869
BmcAI	AGTACT	2 cut(s)	1508, 1823
Bme1390I	CCNGG	2 cut(s)	223, 1514
Bme18I	GGWCC	3 cut(s)	249, 354, 1261
BmgT120I	GGNCC	5 cut(s)	249, 354, 1261, 1478, 1572
BmiI	GGNNCC	2 cut(s)	638, 1263
BmrFI	CCNGG	2 cut(s)	223, 1514
BmrI	ACTGGG	1 cut(s)	38
BmsI	GCATC	8 cut(s)	524, 804, 1206, 1323, 1443, 1572, 1594, 2058
BmtI	GCTAGC	1 cut(s)	617
BmuI	ACTGGG	1 cut(s)	38
BpiI	GAAGAC	1 cut(s)	1308
BplI	GAGNNNNNCTC	4 cut(s)	326, 358, 686, 718
BpmI	CTGGAG	2 cut(s)	499, 1838
Bpu10I	CCTNAGC	1 cut(s)	1532
BpuEI	CTTGAG	2 cut(s)	405, 1523
BpuMI	CCSGG	1 cut(s)	1514
BsaAI	YACGTR	1 cut(s)	1118
BsaHI	GRCGYC	1 cut(s)	1809
BsaI	GGTCTC	1 cut(s)	231
BsaJI	CCNNGG	3 cut(s)	357, 1242, 1379
BsaWI	WCCGGW	1 cut(s)	306
Bsc4I	CCNNNNNNNGG	5 cut(s)	156, 228, 433, 1343, 1614
Bse118I	RCCGGY	2 cut(s)	38, 278
Bse1I	ACTGG	3 cut(s)	33, 482, 1234
Bse21I	CCTNAGG	1 cut(s)	184
Bse3DI	GCAATG	1 cut(s)	315
BseBI	CCWGG	1 cut(s)	223
BseDI	CCNNGG	3 cut(s)	357, 1242, 1379
BseLI	CCNNNNNNNGG	5 cut(s)	156, 228, 433, 1343, 1614
BseMI	GCAATG	1 cut(s)	315
BseMII	CTCAG	3 cut(s)	975, 1590, 1650
BseNI	ACTGG	3 cut(s)	33, 482, 1234
BseRI	GAGGAG	1 cut(s)	1218
BseXI	GCAGC	8 cut(s)	443, 498, 629, 1072, 1114, 1264, 1669, 1950
BseYI	CCCAGC	1 cut(s)	149
BsgI	GTGCAG	1 cut(s)	1080
Bsh1236I	CGCG	2 cut(s)	359, 1244
BshFI	GGCC	5 cut(s)	426, 851, 989, 1479, 1574
BsiHKAI	GWGCWC	2 cut(s)	69, 473
BsiSI	CCGG	5 cut(s)	39, 279, 307, 551, 1513
BslFI	GGGAC	1 cut(s)	1247
BslI	CCNNNNNNNGG	5 cut(s)	156, 228, 433, 1343, 1614
BsmAI	GTCTC	1 cut(s)	231
BsmFI	GGGAC	1 cut(s)	1247
BsmI	GAATGC	2 cut(s)	567, 1902
BsnI	GGCC	5 cut(s)	426, 851, 989, 1479, 1574
Bso31I	GGTCTC	1 cut(s)	231
Bsp1286I	GDGCHC	3 cut(s)	69, 473, 2047
Bsp1407I	TGTACA	1 cut(s)	2001
Bsp143I	GATC	8 cut(s)	43, 160, 636, 1046, 1252, 1591, 1621, 1704
BspACI	CCGC	9 cut(s)	211, 252, 276, 357, 359, 977, 1219, 1242, 1244
BspANI	GGCC	5 cut(s)	426, 851, 989, 1479, 1574
BspCNI	CTCAG	3 cut(s)	976, 1589, 1649
BspFNI	CGCG	2 cut(s)	359, 1244
BspHI	TCATGA	1 cut(s)	1786
BspLI	GGNNCC	2 cut(s)	638, 1263
BspMAI	CTGCAG	2 cut(s)	271, 2143
BspMI	ACCTGC	1 cut(s)	572
BspOI	GCTAGC	1 cut(s)	617
BspPI	GGATC	5 cut(s)	168, 631, 644, 1041, 1599
BspTI	CTTAAG	2 cut(s)	1283, 1327
BspTNI	GGTCTC	1 cut(s)	231
BsrDI	GCAATG	1 cut(s)	315
BsrFI	RCCGGY	2 cut(s)	38, 278
BsrGI	TGTACA	1 cut(s)	2001
BsrI	ACTGG	3 cut(s)	33, 482, 1234
BssAI	RCCGGY	2 cut(s)	38, 278
BssECI	CCNNGG	3 cut(s)	357, 1242, 1379
BssMI	GATC	8 cut(s)	43, 160, 636, 1046, 1252, 1591, 1621, 1704
BssNI	GRCGYC	1 cut(s)	1809
BssSI	CACGAG	1 cut(s)	8
BssT1I	CCWWGG	1 cut(s)	1379
Bst2BI	CACGAG	1 cut(s)	8
Bst2UI	CCWGG	1 cut(s)	223
Bst4CI	ACNGT	3 cut(s)	415, 1487, 2163
Bst6I	CTCTTC	1 cut(s)	1194
BstACI	GRCGYC	1 cut(s)	1809
BstAFI	CTTAAG	2 cut(s)	1283, 1327
BstAUI	TGTACA	1 cut(s)	2001
BstBAI	YACGTR	1 cut(s)	1118
BstDEI	CTNAG	6 cut(s)	184, 984, 1532, 1576, 1636, 2054
BstDSI	CCRYGG	2 cut(s)	357, 1242
BstENI	CCTNNNNNAGG	1 cut(s)	431
BstFNI	CGCG	2 cut(s)	359, 1244
BstH2I	RGCGCY	1 cut(s)	1404
BstHHI	GCGC	3 cut(s)	1403, 1943, 2016
BstKTI	GATC	8 cut(s)	46, 163, 639, 1049, 1255, 1594, 1624, 1707
BstMAI	GTCTC	1 cut(s)	231
BstMBI	GATC	8 cut(s)	43, 160, 636, 1046, 1252, 1591, 1621, 1704
BstMWI	GCNNNNNNNGC	8 cut(s)	39, 275, 456, 556, 583, 848, 1085, 1657
BstNI	CCWGG	1 cut(s)	223
BstNSI	RCATGY	2 cut(s)	590, 742
BstSCI	CCNGG	2 cut(s)	221, 1512
BstSFI	CTRYAG	3 cut(s)	267, 1290, 2139
BstUI	CGCG	2 cut(s)	359, 1244
BstV1I	GCAGC	8 cut(s)	443, 498, 629, 1072, 1114, 1264, 1669, 1950
BstV2I	GAAGAC	1 cut(s)	1308
BstX2I	RGATCY	3 cut(s)	160, 636, 1046
BstYI	RGATCY	3 cut(s)	160, 636, 1046
Bsu36I	CCTNAGG	1 cut(s)	184
BsuI	GTATCC	2 cut(s)	1333, 1869
BsuRI	GGCC	5 cut(s)	426, 851, 989, 1479, 1574
BtgI	CCRYGG	2 cut(s)	357, 1242
BtgZI	GCGATG	1 cut(s)	893
BtsIMutI	CAGTG	3 cut(s)	1145, 1193, 1584
BveI	ACCTGC	1 cut(s)	572
CaiI	CAGNNNCTG	1 cut(s)	2147
CciI	TCATGA	1 cut(s)	1786
CfoI	GCGC	3 cut(s)	1403, 1943, 2016
Cfr10I	RCCGGY	2 cut(s)	38, 278
Cfr13I	GGNCC	5 cut(s)	249, 354, 1261, 1478, 1572
Cfr42I	CCGCGG	2 cut(s)	360, 1245
CseI	GACGC	2 cut(s)	1798, 2060
CsiI	ACCWGGT	1 cut(s)	221
Csp6I	GTAC	6 cut(s)	304, 1115, 1376, 1507, 1822, 2002
CviAII	CATG	9 cut(s)	587, 601, 621, 653, 698, 739, 878, 1569, 1787
CviQI	GTAC	6 cut(s)	304, 1115, 1376, 1507, 1822, 2002
DdeI	CTNAG	6 cut(s)	184, 984, 1532, 1576, 1636, 2054
DpnI	GATC	8 cut(s)	45, 162, 638, 1048, 1254, 1593, 1623, 1706
DpnII	GATC	8 cut(s)	43, 160, 636, 1046, 1252, 1591, 1621, 1704
Eam1104I	CTCTTC	1 cut(s)	1194
EarI	CTCTTC	1 cut(s)	1194
Ecl136II	GAGCTC	1 cut(s)	471
Eco130I	CCWWGG	1 cut(s)	1379
Eco147I	AGGCCT	1 cut(s)	426
Eco24I	GRGCYC	2 cut(s)	473, 2047
Eco31I	GGTCTC	1 cut(s)	231
Eco47I	GGWCC	3 cut(s)	249, 354, 1261
Eco53kI	GAGCTC	1 cut(s)	471
Eco57I	CTGAAG	1 cut(s)	1407
Eco81I	CCTNAGG	1 cut(s)	184
EcoICRI	GAGCTC	1 cut(s)	471
EcoNI	CCTNNNNNAGG	1 cut(s)	431
EcoRI	GAATTC	1 cut(s)	1976
EcoRII	CCWGG	1 cut(s)	221
EcoT14I	CCWWGG	1 cut(s)	1379
EcoT22I	ATGCAT	1 cut(s)	1587
EcoT38I	GRGCYC	2 cut(s)	473, 2047
ErhI	CCWWGG	1 cut(s)	1379
FaeI	CATG	9 cut(s)	590, 604, 624, 656, 701, 742, 881, 1572, 1790
FalI	AAGNNNNNCTT	2 cut(s)	957, 989
FaqI	GGGAC	1 cut(s)	1247
FatI	CATG	9 cut(s)	586, 600, 620, 652, 697, 738, 877, 1568, 1786
FauNDI	CATATG	1 cut(s)	1692
FbaI	TGATCA	1 cut(s)	1704
FblI	GTMKAC	1 cut(s)	1065
FriOI	GRGCYC	2 cut(s)	473, 2047
FspBI	CTAG	3 cut(s)	614, 1317, 2106
FspI	TGCGCA	1 cut(s)	2015
GlaI	GCGC	3 cut(s)	1402, 1942, 2015
GsaI	CCCAGC	1 cut(s)	153
GsuI	CTGGAG	2 cut(s)	499, 1838
HaeII	RGCGCY	1 cut(s)	1404
HaeIII	GGCC	5 cut(s)	426, 851, 989, 1479, 1574
HapII	CCGG	5 cut(s)	39, 279, 307, 551, 1513
HgaI	GACGC	2 cut(s)	1798, 2060
HhaI	GCGC	3 cut(s)	1403, 1943, 2016
Hin1I	GRCGYC	1 cut(s)	1809
Hin1II	CATG	9 cut(s)	590, 604, 624, 656, 701, 742, 881, 1572, 1790
Hin6I	GCGC	3 cut(s)	1401, 1941, 2014
HinP1I	GCGC	3 cut(s)	1401, 1941, 2014
HincII	GTYRAC	2 cut(s)	744, 1239
HindII	GTYRAC	2 cut(s)	744, 1239
HpaII	CCGG	5 cut(s)	39, 279, 307, 551, 1513
HphI	GGTGA	2 cut(s)	172, 1307
Hpy166II	GTNNAC	5 cut(s)	304, 744, 1066, 1239, 2004
Hpy8I	GTNNAC	5 cut(s)	304, 744, 1066, 1239, 2004
Hpy99I	CGWCG	1 cut(s)	59
HpyAV	CCTTC	4 cut(s)	148, 427, 1647, 2098
HpyCH4III	ACNGT	3 cut(s)	415, 1487, 2163
HpyCH4IV	ACGT	1 cut(s)	1117
HpyF10VI	GCNNNNNNNGC	8 cut(s)	39, 275, 456, 556, 583, 848, 1085, 1657
HpyF3I	CTNAG	6 cut(s)	184, 984, 1532, 1576, 1636, 2054
HpySE526I	ACGT	1 cut(s)	1117
Hsp92I	GRCGYC	1 cut(s)	1809
Hsp92II	CATG	9 cut(s)	590, 604, 624, 656, 701, 742, 881, 1572, 1790
HspAI	GCGC	3 cut(s)	1401, 1941, 2014
KroI	GCCGGC	1 cut(s)	278
KroNI	GCCGGC	1 cut(s)	280
Ksp22I	TGATCA	1 cut(s)	1704
KspI	CCGCGG	2 cut(s)	360, 1245
Kzo9I	GATC	8 cut(s)	43, 160, 636, 1046, 1252, 1591, 1621, 1704
LmnI	GCTCC	2 cut(s)	64, 130
Lsp1109I	GCAGC	8 cut(s)	443, 498, 629, 1072, 1114, 1264, 1669, 1950
LweI	GCATC	8 cut(s)	524, 804, 1206, 1323, 1443, 1572, 1594, 2058
MabI	ACCWGGT	1 cut(s)	221
MaeI	CTAG	3 cut(s)	614, 1317, 2106
MaeII	ACGT	1 cut(s)	1117
MaeIII	GTNAC	2 cut(s)	15, 415
MalI	GATC	8 cut(s)	45, 162, 638, 1048, 1254, 1593, 1623, 1706
MboI	GATC	8 cut(s)	43, 160, 636, 1046, 1252, 1591, 1621, 1704
MboII	GAAGA	9 cut(s)	356, 692, 854, 977, 1211, 1313, 1353, 1413, 1706
MfeI	CAATTG	2 cut(s)	1211, 1413
MflI	RGATCY	3 cut(s)	160, 636, 1046
MhlI	GDGCHC	3 cut(s)	69, 473, 2047
MlyI	GAGTC	7 cut(s)	83, 271, 401, 412, 1061, 1213, 2044
MmeI	TCCRAC	3 cut(s)	126, 169, 1539
Mph1103I	ATGCAT	1 cut(s)	1587
MroNI	GCCGGC	1 cut(s)	278
MroXI	GAANNNNTTC	1 cut(s)	972
MseI	TTAA	6 cut(s)	516, 1284, 1328, 1356, 1794, 1826
MslI	CAYNNNNRTG	1 cut(s)	1617
MspA1I	CMGCKG	4 cut(s)	359, 511, 1244, 1273
MspCI	CTTAAG	2 cut(s)	1283, 1327
MspI	CCGG	5 cut(s)	39, 279, 307, 551, 1513
MspR9I	CCNGG	2 cut(s)	223, 1514
MunI	CAATTG	2 cut(s)	1211, 1413
Mva1269I	GAATGC	2 cut(s)	567, 1902
MvaI	CCWGG	1 cut(s)	223
MvnI	CGCG	2 cut(s)	359, 1244
MwoI	GCNNNNNNNGC	8 cut(s)	39, 275, 456, 556, 583, 848, 1085, 1657
NaeI	GCCGGC	1 cut(s)	280
NciI	CCSGG	1 cut(s)	1514
NdeI	CATATG	1 cut(s)	1692
NdeII	GATC	8 cut(s)	43, 160, 636, 1046, 1252, 1591, 1621, 1704
NgoMIV	GCCGGC	1 cut(s)	278
NheI	GCTAGC	1 cut(s)	613
NlaIII	CATG	9 cut(s)	590, 604, 624, 656, 701, 742, 881, 1572, 1790
NlaIV	GGNNCC	2 cut(s)	638, 1263
NmeAIII	GCCGAG	2 cut(s)	285, 321
NmuCI	GTSAC	1 cut(s)	415
NsbI	TGCGCA	1 cut(s)	2015
NsiI	ATGCAT	1 cut(s)	1587
NspI	RCATGY	2 cut(s)	590, 742
PaeI	GCATGC	1 cut(s)	590
PagI	TCATGA	1 cut(s)	1786
PceI	AGGCCT	1 cut(s)	426
PcsI	WCGNNNNNNNCGW	1 cut(s)	1621
PctI	GAATGC	2 cut(s)	567, 1902
PdiI	GCCGGC	1 cut(s)	280
PdmI	GAANNNNTTC	1 cut(s)	972
PfeI	GAWTC	7 cut(s)	84, 174, 827, 1025, 1745, 1781, 2155
PleI	GAGTC	7 cut(s)	83, 270, 400, 412, 1061, 1212, 2043
PpsI	GAGTC	7 cut(s)	83, 270, 400, 412, 1061, 1212, 2043
Ppu21I	YACGTR	1 cut(s)	1118
Psp124BI	GAGCTC	1 cut(s)	473
Psp6I	CCWGG	1 cut(s)	221
PspFI	CCCAGC	1 cut(s)	149
PspGI	CCWGG	1 cut(s)	221
PspN4I	GGNNCC	2 cut(s)	638, 1263
PspPI	GGNCC	5 cut(s)	249, 354, 1261, 1478, 1572
PsrI	GAACNNNNNNTAC	2 cut(s)	1985, 2017
PstI	CTGCAG	2 cut(s)	271, 2143
PstNI	CAGNNNCTG	1 cut(s)	2147
PsuI	RGATCY	3 cut(s)	160, 636, 1046
PvuII	CAGCTG	2 cut(s)	511, 1273
RsaI	GTAC	6 cut(s)	305, 1116, 1377, 1508, 1823, 2003
RsaNI	GTAC	6 cut(s)	304, 1115, 1376, 1507, 1822, 2002
RseI	CAYNNNNRTG	1 cut(s)	1617
SacI	GAGCTC	1 cut(s)	473
SacII	CCGCGG	2 cut(s)	360, 1245
SaqAI	TTAA	6 cut(s)	516, 1284, 1328, 1356, 1794, 1826
Sau3AI	GATC	8 cut(s)	43, 160, 636, 1046, 1252, 1591, 1621, 1704
Sau96I	GGNCC	5 cut(s)	249, 354, 1261, 1478, 1572
ScaI	AGTACT	2 cut(s)	1508, 1823
SchI	GAGTC	7 cut(s)	83, 271, 401, 412, 1061, 1213, 2044
ScrFI	CCNGG	2 cut(s)	223, 1514
SduI	GDGCHC	3 cut(s)	69, 473, 2047
SexAI	ACCWGGT	1 cut(s)	221
SfaNI	GCATC	8 cut(s)	524, 804, 1206, 1323, 1443, 1572, 1594, 2058
SfcI	CTRYAG	3 cut(s)	267, 1290, 2139
Sfr303I	CCGCGG	2 cut(s)	360, 1245
SgrAI	CRCCGGYG	1 cut(s)	38
SgrBI	CCGCGG	2 cut(s)	360, 1245
SinI	GGWCC	3 cut(s)	249, 354, 1261
SmiMI	CAYNNNNRTG	1 cut(s)	1617
SmlI	CTYRAG	4 cut(s)	420, 1283, 1327, 1538
SmoI	CTYRAG	4 cut(s)	420, 1283, 1327, 1538
SphI	GCATGC	1 cut(s)	590
SseBI	AGGCCT	1 cut(s)	426
SsiI	CCGC	9 cut(s)	211, 252, 276, 357, 359, 977, 1219, 1242, 1244
SspI	AATATT	1 cut(s)	1526
SspMI	CTAG	3 cut(s)	614, 1317, 2106
SstI	GAGCTC	1 cut(s)	473
StuI	AGGCCT	1 cut(s)	426
StyD4I	CCNGG	2 cut(s)	221, 1512
StyI	CCWWGG	1 cut(s)	1379
TaaI	ACNGT	3 cut(s)	415, 1487, 2163
TaiI	ACGT	1 cut(s)	1120
TaqI	TCGA	4 cut(s)	54, 87, 886, 1991
TatI	WGTACW	3 cut(s)	1506, 1821, 2001
TauI	GCSGC	2 cut(s)	278, 1222
TfiI	GAWTC	7 cut(s)	84, 174, 827, 1025, 1745, 1781, 2155
Tru1I	TTAA	6 cut(s)	516, 1284, 1328, 1356, 1794, 1826
Tru9I	TTAA	6 cut(s)	516, 1284, 1328, 1356, 1794, 1826
TscAI	CASTG	3 cut(s)	1152, 1193, 1584
TseFI	GTSAC	1 cut(s)	415
TseI	GCWGC	8 cut(s)	456, 511, 617, 1085, 1102, 1277, 1657, 1938
Tsp45I	GTSAC	1 cut(s)	415
TspDTI	ATGAA	4 cut(s)	130, 655, 767, 1907
TspGWI	ACGGA	2 cut(s)	339, 761
TspRI	CASTG	3 cut(s)	1152, 1193, 1584
Vha464I	CTTAAG	2 cut(s)	1283, 1327
VpaK11BI	GGWCC	3 cut(s)	249, 354, 1261
XagI	CCTNNNNNAGG	1 cut(s)	431
XapI	RAATTY	2 cut(s)	232, 1976
XbaI	TCTAGA	1 cut(s)	1316
XceI	RCATGY	2 cut(s)	590, 742
XcmI	CCANNNNNNNNNTGG	2 cut(s)	328, 650
XmiI	GTMKAC	1 cut(s)	1065
XmnI	GAANNNNTTC	1 cut(s)	972
XspI	CTAG	3 cut(s)	614, 1317, 2106
ZrmI	AGTACT	2 cut(s)	1508, 1823
Zsp2I	ATGCAT	1 cut(s)	1587

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.