MD04G1019900.v1.1

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
OG0011107
Physical Location & Seq
Forward (+)
2368892 .. 2372990
4099 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1019900.v1.1.491

Sequence Viewer

Length: 2619 bp
ATGGAAGCAAACCAAACCTCCATGAAATGGAAGCGGCCTTCACCTGTAATGCGGATCAGCAACGGCGTCAAATCTCAGATCCAGCTCCACACCCACCGATCCGATCAGGCCAGAAATTGTGACGGCGATTCTAAGCTTCCGAGCTCCGAATCACTCCGGAAAAGACCCAGATCATTAGATCAGATCATGGAAGGATCTTTAACCGGCACCTTGCTCCGGAGCACCCTGATCAAAGATCTCCGCGTCAAACGGGTATTTTCCCCAACCTCTGACCCGCCTGAGAACGTGAACGACCACCAAAAATTAGGGATTGGATTCGGTTCGCATGAACCAGAAAATGGTCCCAAGGCGGCGAAGAACGATGGGTTGGAGAGTTCTGGAAATGGGATTTCTCGCTCTGGTCCAAATGTGGCTGATTCGGAGAGCATAGGGACTGAGAATTCAGAAATGGGGTTTGTGTTGGATGATGCCAGTCTTAAATCCCCGGCCAGTAAAGGGATCGGTGGCTCCGCTCAGCAATGTGCCCAGAAATCATCACCCGATGCGAAGGCAAATAGTTTTCGTGTCAATGTCGATTATCAAACCAAATCGGTCCTTAAGCCTCGACAGAGAGTGTTTAAAGCTCCCGGCTCATTCAGTTATAGACGATTGCTTCCGTATTTAAACGATATGGCGAAAGACAATTCTTGTATGCTTGAGTTTCGTCAACAGCCAAATCTTAATAAAGGTTTGGAAGGAAAACCGTTCCAGGGTAAGCGGGCTTCTGAAAATCAAGCAGGTTTCTTGCATCAATTTAATGAGCAGAAACTTTCCAGGGAGTGTCCTACCAATGGTTCTTCTGCTCAGCTGGAAACTGTACAAGTTTCTTCAAATGACACATCTAATGATAGTGTTGCTTCGGAATCACCATCTATGACTGTGGTTGATGAGTGTCGGTCAAAGCCACCTGTTGATGAACAGGTTGAAATTTGTGATTTGGGATTTTCTTGCAAAGTTCAGAAGTTAAATTCTCCGAGCCCCTTTTCCTCATCAGCTGTGGAGGACTCTCTAGTTAATAAGGATCATGTTATTGACGTGTATGCTGATGGTGATACACCAGTAGAGAATGCGGGGACTGCCGATAAAGCTGTTAATGGGTTTCCGGGCGAAGCTCAAAATGTGAAAGATAAAAATCCCAACTCACATTCGATTGTGGAGGAGTGCTATTCATGCAAGGATAGTGAAGTTGGTCAGAACATAAACCTACTTCAGAATGATGGGATGAGAAAAAATGACATGGGCTATCTTTGTAAAGACCAAAATCCAAATCACTTAAATGAGCAGAGAGTTGGTAATGCCGGTGACATTTTGAATCAGATAGATGATTCAAACGAAGACGATTGCCAGATGACACCACCAGATGCTGAGATCTTAGGGAAACTTAAGGGGGAAGTAAAAAGAGTTAGTGAAGAAGGATATGTTCTTCAGAGTACAAATGAAGGTTCGGAGATGCCATCCACTGCATTCAATCATAGAGATGTTCCATCTGTTGATATTAAGAGACATGAATCTACTCCCAAGAGAAATCTGGTTTTAAATCCATGTTCACGACTCAAGTTGTTTAGGAGTCCGGGATCAATTAGCTACAGAAGATTGCTTCCATTTCTTATGGACATGGAGAAGACTAACTCTGCTGCCAATACTGATAAGGATTTGAAACAAAAGCAACTGTCACCAGTGACTCCTAATCAGCAAGAAACACCAATGGATAAATCAGAGGGCTTGAAATTTCAATCAAAGCATCAAATTTGTGATCCCGGTACTCTACCGACACCACAACTAGTGACAGCTAATGGCTCATCTAACGATGGTGGACAGAATTTAACTTCTCCAGAGCACGTCCCTGAATCTCAAATGCCAATTGATTTACAAGAGGAACATTATGCTGAGCAGGCTGTATCAGGTAAACAAAGTAAACTGGAAACACGCCCTGAGATAATGAGTTCGGAACAAGAAACAGATGCACCAGTCACTTTATTATGCCCCAGTACTTCCTTAAAAGACGGTGCAATATCAGTCAGTGATTCATTATCTGATAAACCTGAAGAGGAAGGCATAAGTTCAAGAGCAACATTATCTAATGGTGGGAAGCCACTTCAAGCTAATAGCTTTTCTCAGAACTCATCCGAAATTGCTGCCACAGTTTCTTCAGGTATTCATGAAGTTGGTCCCAGAAAAGGGATCCTTAAAAGAAATCCACGAGGATGCAGAGGACTCTGCTCGTGTTTGAATTGTGCTTCGTTTAGACTCCATGCAGAGAGAGCATTTGAGTTCTCTAGAAATCAGATGCAAGATGCTGAAGAAGTAGCCTTAGATTTGATGAAAGAACTATCCAATTTACGTAAGATATTAGAATTATCAGCTGCTAGTGCAACTAATCCCAGCATGAACTTAAACGAGGTTAAAGAAGCTTGCAGGAGAGCATCTGAAGCGGAAGGCATTGCAAGAAACCGCCTCGGTGAAATGAATTATGATCTCAACATTCACTCCAGAGTCACATGCTTGCAGGAACCAAGTGTCACATTTGCAAATTACGTTGAAGAAAAAGTCATTCCGAAAGAAAAGTTTTCAAGCAGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

873

Amino Acids

95.44

Weight (kDa)

5.61

Isoelectric Point (pI)

54.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011107)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G23740 AT4G14120
fragaria_vesca FvH4_4g12980 FvH4_4g12980 FvH4_4g12980 FvH4_4g12980
malus_domestica MD04G1019900.v1.1
prunus_persica Prupe.1G169400_v2.0.a1
pyrus_communis pycom04g01590
rosa_chinensis RchiOBHm_Chr4g0412661
rosa_laevigata RLG00000008269
rosa_multiflora Rmu_co8037358.1_g000001 Rmu_sc0001238.1_g000004
rosa_roxburghii Rroxscaffold_5G00356860
rosa_rugosa Rorug04G0115700
rosa_samantha Rh4AG174900 Rh4BG174300 Rh4CG185800 Rh4DG170800
rosa_wichuraiana Rw4G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 767
AccB1I GGYRCC 1 cut(s) 206
AccB7I CCANNNNNTGG 2 cut(s) 27, 338
AccBSI CCGCTC 1 cut(s) 512
AccII CGCG 1 cut(s) 243
AccIII TCCGGA 2 cut(s) 156, 216
AcoI YGGCCR 1 cut(s) 486
AcsI RAATTY 6 cut(s) 439, 966, 1006, 1766, 1785, 1858
AcuI CTGAAG 6 cut(s) 1232, 1448, 2103, 2172, 2358, 2487
AcyI GRCGYC 1 cut(s) 66
AfaI GTAC 4 cut(s) 858, 1471, 1801, 2029
AfiI CCNNNNNNNGG 8 cut(s) 27, 216, 338, 495, 749, 830, 2216, 2217
AflII CTTAAG 2 cut(s) 596, 1421
AflIII ACRYGT 1 cut(s) 1074
AhlI ACTAGT 1 cut(s) 1819
AjiI CACGTC 2 cut(s) 1075, 1879
AjnI CCWGG 2 cut(s) 747, 812
AjuI GAANNNNNNNTTGG 2 cut(s) 350, 382
Alw21I GWGCWC 3 cut(s) 146, 224, 1878
Alw26I GTCTC 1 cut(s) 1534
AlwNI CAGNNNCTG 1 cut(s) 1403
Aor13HI TCCGGA 2 cut(s) 156, 216
AoxI GGCC 3 cut(s) 35, 108, 486
ApeKI GCWGC 4 cut(s) 1673, 2174, 2402, 2613
ApoI RAATTY 6 cut(s) 439, 966, 1006, 1766, 1785, 1858
AspS9I GGNCC 4 cut(s) 341, 401, 592, 2207
AsuC2I CCSGG 5 cut(s) 485, 627, 1143, 1611, 1797
AsuHPI GGTGA 7 cut(s) 33, 528, 897, 1100, 1352, 1704, 2510
AvaII GGWCC 4 cut(s) 341, 401, 592, 2207
BaeGI GKGCMC 1 cut(s) 526
BaeI ACNNNNGTAYC 2 cut(s) 1083, 1116
BamHI GGATCC 1 cut(s) 2220
BanI GGYRCC 1 cut(s) 206
BanII GRGCYC 2 cut(s) 146, 1019
BarI GAAGNNNNNNTAC 2 cut(s) 745, 777
BauI CACGAG 2 cut(s) 2238, 2260
BbsI GAAGAC 2 cut(s) 1380, 1667
Bbv12I GWGCWC 3 cut(s) 146, 224, 1878
BbvI GCAGC 3 cut(s) 1660, 2161, 2389
BccI CCATC 7 cut(s) 356, 916, 1079, 1250, 1501, 1531, 1841
BceAI ACGGC 2 cut(s) 79, 139
BcgI CGANNNNNNTGC 2 cut(s) 2156, 2190
BciT130I CCWGG 2 cut(s) 749, 814
BclI TGATCA 1 cut(s) 228
BcnI CCSGG 5 cut(s) 485, 627, 1143, 1611, 1797
BcoDI GTCTC 1 cut(s) 1534
BcuI ACTAGT 1 cut(s) 1819
BfaI CTAG 5 cut(s) 1049, 1820, 2316, 2406, 2617
BfmI CTRYAG 1 cut(s) 1624
BfrI CTTAAG 2 cut(s) 596, 1421
BfuAI ACCTGC 1 cut(s) 767
BglII AGATCT 2 cut(s) 235, 1407
BisI GCNGC 6 cut(s) 35, 351, 1674, 2175, 2403, 2614
BlpI GCTNAGC 3 cut(s) 513, 843, 1926
BlsI GCNGC 6 cut(s) 36, 352, 1675, 2176, 2404, 2615
BmcAI AGTACT 1 cut(s) 2029
Bme1390I CCNGG 7 cut(s) 485, 627, 749, 814, 1143, 1611, 1797
Bme18I GGWCC 4 cut(s) 341, 401, 592, 2207
BmgBI CACGTC 2 cut(s) 1075, 1879
BmgT120I GGNCC 4 cut(s) 341, 401, 592, 2207
BmiI GGNNCC 6 cut(s) 208, 343, 508, 2209, 2222, 2550
BmrFI CCNGG 7 cut(s) 485, 627, 749, 814, 1143, 1611, 1797
BmrI ACTGGG 1 cut(s) 2019
BmuI ACTGGG 1 cut(s) 2019
BpiI GAAGAC 2 cut(s) 1380, 1667
BpmI CTGGAG 2 cut(s) 1854, 2512
Bpu1102I GCTNAGC 3 cut(s) 513, 843, 1926
BpuEI CTTGAG 2 cut(s) 716, 1577
BpuMI CCSGG 5 cut(s) 485, 627, 1143, 1611, 1797
BsaAI YACGTR 1 cut(s) 2381
BsaBI GATNNNNATC 1 cut(s) 1170
BsaHI GRCGYC 1 cut(s) 66
BsaJI CCNNGG 5 cut(s) 345, 483, 748, 813, 2494
BsaWI WCCGGW 2 cut(s) 156, 216
BsaXI ACNNNNNCTCC 3 cut(s) 32, 2510, 2540
Bsc4I CCNNNNNNNGG 8 cut(s) 27, 216, 338, 495, 749, 830, 2216, 2217
Bse118I RCCGGY 2 cut(s) 203, 1337
Bse1I ACTGG 7 cut(s) 471, 489, 1097, 1715, 1962, 2006, 2025
Bse3DI GCAATG 2 cut(s) 524, 2478
Bse8I GATNNNNATC 1 cut(s) 1170
BseAI TCCGGA 2 cut(s) 156, 216
BseBI CCWGG 2 cut(s) 749, 814
BseDI CCNNGG 5 cut(s) 345, 483, 748, 813, 2494
BseGI GGATG 5 cut(s) 469, 1266, 1493, 2162, 2249
BseJI GATNNNNATC 1 cut(s) 1170
BseLI CCNNNNNNNGG 8 cut(s) 27, 216, 338, 495, 749, 830, 2216, 2217
BseMI GCAATG 2 cut(s) 524, 2478
BseMII CTCAG 9 cut(s) 89, 270, 426, 527, 857, 1395, 1917, 1962, 2168
BseNI ACTGG 7 cut(s) 471, 489, 1097, 1715, 1962, 2006, 2025
BseRI GAGGAG 1 cut(s) 1211
BseSI GKGCMC 1 cut(s) 526
BseXI GCAGC 3 cut(s) 1660, 2161, 2389
BseYI CCCAGC 1 cut(s) 2420
Bsh1236I CGCG 1 cut(s) 243
BshFI GGCC 3 cut(s) 37, 110, 488
BshNI GGYRCC 1 cut(s) 206
BsiHKAI GWGCWC 3 cut(s) 146, 224, 1878
BsiSI CCGG 9 cut(s) 157, 204, 217, 485, 627, 1142, 1338, 1610, 1797
BslFI GGGAC 5 cut(s) 327, 445, 1126, 1865, 2193
BslI CCNNNNNNNGG 8 cut(s) 27, 216, 338, 495, 749, 830, 2216, 2217
BsmAI GTCTC 1 cut(s) 1534
BsmFI GGGAC 5 cut(s) 327, 445, 1126, 1865, 2193
BsmI GAATGC 2 cut(s) 1111, 1502
BsnI GGCC 3 cut(s) 37, 110, 488
Bsp1286I GDGCHC 5 cut(s) 146, 224, 526, 1019, 1878
Bsp13I TCCGGA 2 cut(s) 156, 216
Bsp1407I TGTACA 1 cut(s) 856
Bsp1720I GCTNAGC 3 cut(s) 513, 843, 1926
BspANI GGCC 3 cut(s) 37, 110, 488
BspCNI CTCAG 9 cut(s) 88, 271, 427, 526, 856, 1396, 1918, 1963, 2167
BspEI TCCGGA 2 cut(s) 156, 216
BspFNI CGCG 1 cut(s) 243
BspHI TCATGA 1 cut(s) 2197
BspLI GGNNCC 6 cut(s) 208, 343, 508, 2209, 2222, 2550
BspMI ACCTGC 1 cut(s) 767
BspT107I GGYRCC 1 cut(s) 206
BspTI CTTAAG 2 cut(s) 596, 1421
BsrBI CCGCTC 1 cut(s) 512
BsrDI GCAATG 2 cut(s) 524, 2478
BsrFI RCCGGY 2 cut(s) 203, 1337
BsrGI TGTACA 1 cut(s) 856
BsrI ACTGG 7 cut(s) 471, 489, 1097, 1715, 1962, 2006, 2025
BssAI RCCGGY 2 cut(s) 203, 1337
BssECI CCNNGG 5 cut(s) 345, 483, 748, 813, 2494
BssNI GRCGYC 1 cut(s) 66
BssSI CACGAG 2 cut(s) 2238, 2260
BssT1I CCWWGG 1 cut(s) 345
Bst2BI CACGAG 2 cut(s) 2238, 2260
Bst2UI CCWGG 2 cut(s) 749, 814
Bst4CI ACNGT 6 cut(s) 744, 856, 919, 1710, 2045, 2182
Bst6I CTCTTC 1 cut(s) 2079
BstACI GRCGYC 1 cut(s) 66
BstAFI CTTAAG 2 cut(s) 596, 1421
BstAUI TGTACA 1 cut(s) 856
BstBAI YACGTR 1 cut(s) 2381
BstC8I GCNNGC 4 cut(s) 759, 1932, 2452, 2543
BstF5I GGATG 5 cut(s) 469, 1266, 1493, 2162, 2249
BstFNI CGCG 1 cut(s) 243
BstMAI GTCTC 1 cut(s) 1534
BstMWI GCNNNNNNNGC 7 cut(s) 1115, 1124, 1209, 1931, 2300, 2408, 2468
BstNI CCWGG 2 cut(s) 749, 814
BstNSI RCATGY 1 cut(s) 2541
BstSCI CCNGG 7 cut(s) 483, 625, 747, 812, 1141, 1609, 1795
BstSFI CTRYAG 1 cut(s) 1624
BstSLI GKGCMC 1 cut(s) 526
BstSNI TACGTA 1 cut(s) 2381
BstUI CGCG 1 cut(s) 243
BstV1I GCAGC 3 cut(s) 1660, 2161, 2389
BstV2I GAAGAC 2 cut(s) 1380, 1667
BstX2I RGATCY 5 cut(s) 78, 194, 235, 1407, 2220
BstYI RGATCY 5 cut(s) 78, 194, 235, 1407, 2220
BsuRI GGCC 3 cut(s) 37, 110, 488
BtrI CACGTC 2 cut(s) 1075, 1879
BtsCI GGATG 5 cut(s) 469, 1266, 1493, 2162, 2249
BtsI GCAGTG 1 cut(s) 1497
BtsIMutI CAGTG 3 cut(s) 1497, 1722, 2065
BveI ACCTGC 1 cut(s) 767
Cac8I GCNNGC 4 cut(s) 759, 1932, 2452, 2543
CaiI CAGNNNCTG 1 cut(s) 1403
CciI TCATGA 1 cut(s) 2197
Cfr10I RCCGGY 2 cut(s) 203, 1337
Cfr13I GGNCC 4 cut(s) 341, 401, 592, 2207
CseI GACGC 2 cut(s) 55, 232
Csp6I GTAC 4 cut(s) 857, 1470, 1800, 2028
CviQI GTAC 4 cut(s) 857, 1470, 1800, 2028
DraI TTTAAA 3 cut(s) 619, 663, 1575
EaeI YGGCCR 1 cut(s) 486
Eam1104I CTCTTC 1 cut(s) 2079
EarI CTCTTC 1 cut(s) 2079
Ecl136II GAGCTC 1 cut(s) 144
Eco105I TACGTA 1 cut(s) 2381
Eco130I CCWWGG 1 cut(s) 345
Eco24I GRGCYC 2 cut(s) 146, 1019
Eco47I GGWCC 4 cut(s) 341, 401, 592, 2207
Eco53kI GAGCTC 1 cut(s) 144
Eco57I CTGAAG 6 cut(s) 1232, 1448, 2103, 2172, 2358, 2487
EcoICRI GAGCTC 1 cut(s) 144
EcoRI GAATTC 1 cut(s) 439
EcoRII CCWGG 2 cut(s) 747, 812
EcoT14I CCWWGG 1 cut(s) 345
EcoT38I GRGCYC 2 cut(s) 146, 1019
ErhI CCWWGG 1 cut(s) 345
FalI AAGNNNNNCTT 2 cut(s) 2208, 2240
FaqI GGGAC 5 cut(s) 327, 445, 1126, 1865, 2193
FauI CCCGC 3 cut(s) 282, 750, 1102
FbaI TGATCA 1 cut(s) 228
Fnu4HI GCNGC 6 cut(s) 35, 351, 1674, 2175, 2403, 2614
FokI GGATG 5 cut(s) 476, 1273, 1480, 2149, 2256
FriOI GRGCYC 2 cut(s) 146, 1019
Fsp4HI GCNGC 6 cut(s) 35, 351, 1674, 2175, 2403, 2614
FspBI CTAG 5 cut(s) 1049, 1820, 2316, 2406, 2617
GluI GCNGC 6 cut(s) 35, 351, 1674, 2175, 2403, 2614
GsaI CCCAGC 1 cut(s) 2424
GsuI CTGGAG 2 cut(s) 1854, 2512
HaeIII GGCC 3 cut(s) 37, 110, 488
HapII CCGG 9 cut(s) 157, 204, 217, 485, 627, 1142, 1338, 1610, 1797
HgaI GACGC 2 cut(s) 55, 232
Hin1I GRCGYC 1 cut(s) 66
HincII GTYRAC 1 cut(s) 707
HindII GTYRAC 1 cut(s) 707
HindIII AAGCTT 2 cut(s) 134, 2448
HpaII CCGG 9 cut(s) 157, 204, 217, 485, 627, 1142, 1338, 1610, 1797
HphI GGTGA 7 cut(s) 33, 528, 897, 1100, 1352, 1704, 2510
Hpy166II GTNNAC 6 cut(s) 289, 707, 1586, 1853, 1946, 1955
Hpy188III TCNNGA 9 cut(s) 157, 217, 378, 1587, 1871, 2103, 2198, 2316, 2529
Hpy8I GTNNAC 6 cut(s) 289, 707, 1586, 1853, 1946, 1955
HpyAV CCTTC 8 cut(s) 48, 185, 541, 728, 1445, 1472, 2084, 2468
HpyCH4III ACNGT 6 cut(s) 744, 856, 919, 1710, 2045, 2182
HpyCH4IV ACGT 5 cut(s) 285, 1074, 1878, 2380, 2574
HpyF10VI GCNNNNNNNGC 7 cut(s) 1115, 1124, 1209, 1931, 2300, 2408, 2468
HpySE526I ACGT 5 cut(s) 285, 1074, 1878, 2380, 2574
Hsp92I GRCGYC 1 cut(s) 66
Kpn2I TCCGGA 2 cut(s) 156, 216
Ksp22I TGATCA 1 cut(s) 228
LmnI GCTCC 6 cut(s) 90, 149, 219, 219, 512, 628
Lsp1109I GCAGC 3 cut(s) 1660, 2161, 2389
MaeI CTAG 5 cut(s) 1049, 1820, 2316, 2406, 2617
MaeII ACGT 5 cut(s) 285, 1074, 1878, 2380, 2574
MaeIII GTNAC 8 cut(s) 119, 1340, 1710, 1717, 1822, 2008, 2533, 2557
MbiI CCGCTC 1 cut(s) 512
MfeI CAATTG 1 cut(s) 1899
MflI RGATCY 5 cut(s) 78, 194, 235, 1407, 2220
MhlI GDGCHC 5 cut(s) 146, 224, 526, 1019, 1878
MlyI GAGTC 7 cut(s) 1037, 1584, 1615, 1714, 2247, 2280, 2541
MmeI TCCRAC 2 cut(s) 348, 441
MroI TCCGGA 2 cut(s) 156, 216
MslI CAYNNNNRTG 3 cut(s) 1314, 1515, 2242
MspA1I CMGCKG 3 cut(s) 847, 1034, 2402
MspCI CTTAAG 2 cut(s) 596, 1421
MspI CCGG 9 cut(s) 157, 204, 217, 485, 627, 1142, 1338, 1610, 1797
MspR9I CCNGG 7 cut(s) 485, 627, 749, 814, 1143, 1611, 1797
MunI CAATTG 1 cut(s) 1899
Mva1269I GAATGC 2 cut(s) 1111, 1502
MvaI CCWGG 2 cut(s) 749, 814
MvnI CGCG 1 cut(s) 243
MwoI GCNNNNNNNGC 7 cut(s) 1115, 1124, 1209, 1931, 2300, 2408, 2468
NciI CCSGG 5 cut(s) 485, 627, 1143, 1611, 1797
NlaIV GGNNCC 6 cut(s) 208, 343, 508, 2209, 2222, 2550
NmuCI GTSAC 8 cut(s) 119, 1340, 1710, 1717, 1822, 2008, 2533, 2557
NspI RCATGY 1 cut(s) 2541
PagI TCATGA 1 cut(s) 2197
PctI GAATGC 2 cut(s) 1111, 1502
PflMI CCANNNNNTGG 2 cut(s) 27, 338
PfoI TCCNGGA 1 cut(s) 1609
PkrI GCNGC 6 cut(s) 36, 352, 1675, 2176, 2404, 2615
PleI GAGTC 7 cut(s) 1037, 1584, 1614, 1714, 2247, 2280, 2540
PpsI GAGTC 7 cut(s) 1037, 1584, 1614, 1714, 2247, 2280, 2540
Ppu21I YACGTR 1 cut(s) 2381
Psp124BI GAGCTC 1 cut(s) 146
Psp6I CCWGG 2 cut(s) 747, 812
PspFI CCCAGC 1 cut(s) 2420
PspGI CCWGG 2 cut(s) 747, 812
PspN4I GGNNCC 6 cut(s) 208, 343, 508, 2209, 2222, 2550
PspPI GGNCC 4 cut(s) 341, 401, 592, 2207
PstNI CAGNNNCTG 1 cut(s) 1403
PsuI RGATCY 5 cut(s) 78, 194, 235, 1407, 2220
PvuII CAGCTG 3 cut(s) 847, 1034, 2402
RsaI GTAC 4 cut(s) 858, 1471, 1801, 2029
RsaNI GTAC 4 cut(s) 857, 1470, 1800, 2028
RseI CAYNNNNRTG 3 cut(s) 1314, 1515, 2242
SacI GAGCTC 1 cut(s) 146
SatI GCNGC 6 cut(s) 35, 351, 1674, 2175, 2403, 2614
Sau96I GGNCC 4 cut(s) 341, 401, 592, 2207
ScaI AGTACT 1 cut(s) 2029
SchI GAGTC 7 cut(s) 1037, 1584, 1615, 1714, 2247, 2280, 2541
ScrFI CCNGG 7 cut(s) 485, 627, 749, 814, 1143, 1611, 1797
SduI GDGCHC 5 cut(s) 146, 224, 526, 1019, 1878
SfcI CTRYAG 1 cut(s) 1624
SinI GGWCC 4 cut(s) 341, 401, 592, 2207
SmiMI CAYNNNNRTG 3 cut(s) 1314, 1515, 2242
SmlI CTYRAG 4 cut(s) 596, 695, 1421, 1592
SmoI CTYRAG 4 cut(s) 596, 695, 1421, 1592
SnaBI TACGTA 1 cut(s) 2381
SpeI ACTAGT 1 cut(s) 1819
SspMI CTAG 5 cut(s) 1049, 1820, 2316, 2406, 2617
SstI GAGCTC 1 cut(s) 146
StyD4I CCNGG 7 cut(s) 483, 625, 747, 812, 1141, 1609, 1795
StyI CCWWGG 1 cut(s) 345
TaaI ACNGT 6 cut(s) 744, 856, 919, 1710, 2045, 2182
TaiI ACGT 5 cut(s) 288, 1077, 1881, 2383, 2577
TaqI TCGA 3 cut(s) 573, 604, 1187
TaqII GACCGA 2 cut(s) 580, 924
TatI WGTACW 3 cut(s) 856, 1469, 2027
TauI GCSGC 2 cut(s) 37, 353
TscAI CASTG 3 cut(s) 1504, 1722, 2065
TseFI GTSAC 8 cut(s) 119, 1340, 1710, 1717, 1822, 2008, 2533, 2557
TseI GCWGC 4 cut(s) 1673, 2174, 2402, 2613
Tsp45I GTSAC 8 cut(s) 119, 1340, 1710, 1717, 1822, 2008, 2533, 2557
TspGWI ACGGA 1 cut(s) 645
TspRI CASTG 3 cut(s) 1504, 1722, 2065
Van91I CCANNNNNTGG 2 cut(s) 27, 338
Vha464I CTTAAG 2 cut(s) 596, 1421
VpaK11BI GGWCC 4 cut(s) 341, 401, 592, 2207
XapI RAATTY 6 cut(s) 439, 966, 1006, 1766, 1785, 1858
XbaI TCTAGA 1 cut(s) 2315
XceI RCATGY 1 cut(s) 2541
XcmI CCANNNNNNNNNTGG 1 cut(s) 1564
XspI CTAG 5 cut(s) 1049, 1820, 2316, 2406, 2617
ZrmI AGTACT 1 cut(s) 2029
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.