No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G23740 AT4G14120 |
| fragaria_vesca | FvH4_4g12980 FvH4_4g12980 FvH4_4g12980 FvH4_4g12980 |
| malus_domestica | MD04G1019900.v1.1 |
| prunus_persica | Prupe.1G169400_v2.0.a1 |
| pyrus_communis | pycom04g01590 |
| rosa_chinensis | RchiOBHm_Chr4g0412661 |
| rosa_laevigata | RLG00000008269 |
| rosa_multiflora | Rmu_co8037358.1_g000001 Rmu_sc0001238.1_g000004 |
| rosa_roxburghii | Rroxscaffold_5G00356860 |
| rosa_rugosa | Rorug04G0115700 |
| rosa_samantha | Rh4AG174900 Rh4BG174300 Rh4CG185800 Rh4DG170800 |
| rosa_wichuraiana | Rw4G014660 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 164, 197 |
| AccB1I | GGYRCC | 1 cut(s) | 263 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 671 |
| AccBSI | CCGCTC | 1 cut(s) | 81 |
| AccII | CGCG | 1 cut(s) | 198 |
| AccIII | TCCGGA | 2 cut(s) | 466, 699 |
| AclWI | GGATC | 7 cut(s) | 55, 458, 1396, 1701, 1873, 2227, 2240 |
| AcsI | RAATTY | 5 cut(s) | 394, 427, 757, 1837, 2150 |
| AcuI | CTGAAG | 9 cut(s) | 635, 832, 1152, 1353, 1604, 1644, 2184, 2370, 2499 |
| AcyI | GRCGYC | 2 cut(s) | 252, 264 |
| AfaI | GTAC | 6 cut(s) | 738, 810, 1057, 1078, 1465, 1684 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 187, 671, 929, 1730, 1999, 2000 |
| AflII | CTTAAG | 1 cut(s) | 548 |
| AgeI | ACCGGT | 1 cut(s) | 1558 |
| AgsI | TTSAA | 8 cut(s) | 300, 1345, 1363, 1578, 1679, 2155, 2281, 2622 |
| AjnI | CCWGG | 2 cut(s) | 1236, 1777 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 136, 168, 935, 967 |
| AleI | CACNNNNGTG | 1 cut(s) | 2075 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1974, 2006 |
| Alw26I | GTCTC | 1 cut(s) | 991 |
| AlwI | GGATC | 7 cut(s) | 55, 458, 1396, 1701, 1873, 2227, 2240 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 910, 1397, 1778 |
| Ama87I | CYCGRG | 2 cut(s) | 82, 233 |
| Aor13HI | TCCGGA | 2 cut(s) | 466, 699 |
| ApeKI | GCWGC | 2 cut(s) | 48, 2414 |
| ApoI | RAATTY | 5 cut(s) | 394, 427, 757, 1837, 2150 |
| AseI | ATTAAT | 1 cut(s) | 1500 |
| AsiGI | ACCGGT | 1 cut(s) | 1558 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 870, 996, 1212 |
| AspLEI | GCGC | 2 cut(s) | 266, 577 |
| AspS9I | GGNCC | 6 cut(s) | 124, 190, 544, 1733, 1832, 2003 |
| AsuC2I | CCSGG | 1 cut(s) | 1602 |
| AsuHPI | GGTGA | 5 cut(s) | 477, 616, 873, 1337, 2464 |
| AvaI | CYCGRG | 2 cut(s) | 82, 233 |
| AvaII | GGWCC | 6 cut(s) | 124, 190, 544, 1733, 1832, 2003 |
| AxyI | CCTNAGG | 1 cut(s) | 492 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 1089, 1122, 1647, 1680 |
| BamHI | GGATCC | 1 cut(s) | 2232 |
| BanI | GGYRCC | 1 cut(s) | 263 |
| BanII | GRGCYC | 1 cut(s) | 519 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1968, 2000 |
| BauI | CACGAG | 1 cut(s) | 2250 |
| BbsI | GAAGAC | 1 cut(s) | 1490 |
| BbvCI | CCTCAGC | 1 cut(s) | 1725 |
| BbvI | GCAGC | 2 cut(s) | 60, 2401 |
| BccI | CCATC | 7 cut(s) | 923, 1031, 1735, 1823, 2030, 2126, 2365 |
| BceAI | ACGGC | 2 cut(s) | 175, 251 |
| BciT130I | CCWGG | 2 cut(s) | 1238, 1779 |
| BciVI | GTATCC | 3 cut(s) | 1090, 1287, 1675 |
| BclI | TGATCA | 2 cut(s) | 316, 901 |
| BcnI | CCSGG | 1 cut(s) | 1602 |
| BcoDI | GTCTC | 1 cut(s) | 991 |
| BfaI | CTAG | 4 cut(s) | 111, 647, 834, 1730 |
| BfmI | CTRYAG | 5 cut(s) | 432, 765, 888, 1615, 2539 |
| BfoI | RGCGCY | 2 cut(s) | 267, 578 |
| BfrI | CTTAAG | 1 cut(s) | 548 |
| BfuI | GTATCC | 3 cut(s) | 1090, 1287, 1675 |
| BisI | GCNGC | 3 cut(s) | 49, 230, 2415 |
| BlpI | GCTNAGC | 1 cut(s) | 352 |
| BlsI | GCNGC | 3 cut(s) | 50, 231, 2416 |
| BmcAI | AGTACT | 1 cut(s) | 1684 |
| Bme1390I | CCNGG | 3 cut(s) | 1238, 1602, 1779 |
| Bme18I | GGWCC | 6 cut(s) | 124, 190, 544, 1733, 1832, 2003 |
| BmeT110I | CYCGRG | 2 cut(s) | 82, 233 |
| BmgT120I | GGNCC | 6 cut(s) | 124, 190, 544, 1733, 1832, 2003 |
| BmiI | GGNNCC | 5 cut(s) | 265, 454, 460, 2004, 2234 |
| BmrFI | CCNGG | 3 cut(s) | 1238, 1602, 1779 |
| BmrI | ACTGGG | 1 cut(s) | 1156 |
| BmuI | ACTGGG | 1 cut(s) | 1156 |
| BpiI | GAAGAC | 1 cut(s) | 1490 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 501, 533 |
| BpmI | CTGGAG | 1 cut(s) | 342 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1725 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 352 |
| BpuMI | CCSGG | 1 cut(s) | 1602 |
| Bsa29I | ATCGAT | 1 cut(s) | 525 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1192 |
| BsaHI | GRCGYC | 2 cut(s) | 252, 264 |
| BsaJI | CCNNGG | 2 cut(s) | 1601, 2564 |
| BsaWI | WCCGGW | 6 cut(s) | 126, 286, 455, 466, 699, 1558 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2005, 2035 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 187, 671, 929, 1730, 1999, 2000 |
| Bse118I | RCCGGY | 1 cut(s) | 1558 |
| Bse1I | ACTGG | 6 cut(s) | 1082, 1162, 1668, 1941, 2066, 2144 |
| Bse21I | CCTNAGG | 1 cut(s) | 492 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1192 |
| BseAI | TCCGGA | 2 cut(s) | 466, 699 |
| BseBI | CCWGG | 2 cut(s) | 1238, 1779 |
| BseCI | ATCGAT | 1 cut(s) | 525 |
| BseDI | CCNNGG | 2 cut(s) | 1601, 2564 |
| BseGI | GGATG | 8 cut(s) | 36, 373, 1042, 1117, 1186, 1294, 2221, 2261 |
| BseJI | GATNNNNATC | 1 cut(s) | 1192 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 187, 671, 929, 1730, 1999, 2000 |
| BseNI | ACTGG | 6 cut(s) | 1082, 1162, 1668, 1941, 2066, 2144 |
| BseRI | GAGGAG | 1 cut(s) | 161 |
| BseXI | GCAGC | 2 cut(s) | 60, 2401 |
| BseYI | CCCAGC | 1 cut(s) | 578 |
| BsgI | GTGCAG | 1 cut(s) | 2254 |
| Bsh1236I | CGCG | 1 cut(s) | 198 |
| BshNI | GGYRCC | 1 cut(s) | 263 |
| BshTI | ACCGGT | 1 cut(s) | 1558 |
| BshVI | ATCGAT | 1 cut(s) | 525 |
| BsiHKCI | CYCGRG | 2 cut(s) | 82, 233 |
| BsiSI | CCGG | 8 cut(s) | 127, 261, 287, 456, 467, 700, 1559, 1601 |
| BslFI | GGGAC | 2 cut(s) | 1976, 1983 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 187, 671, 929, 1730, 1999, 2000 |
| BsmAI | GTCTC | 1 cut(s) | 991 |
| BsmFI | GGGAC | 2 cut(s) | 1976, 1983 |
| BsmI | GAATGC | 1 cut(s) | 606 |
| BsoBI | CYCGRG | 2 cut(s) | 82, 233 |
| Bsp1286I | GDGCHC | 1 cut(s) | 519 |
| Bsp13I | TCCGGA | 2 cut(s) | 466, 699 |
| Bsp1407I | TGTACA | 2 cut(s) | 736, 808 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 352 |
| BspDI | ATCGAT | 1 cut(s) | 525 |
| BspEI | TCCGGA | 2 cut(s) | 466, 699 |
| BspFNI | CGCG | 1 cut(s) | 198 |
| BspHI | TCATGA | 1 cut(s) | 775 |
| BspLI | GGNNCC | 5 cut(s) | 265, 454, 460, 2004, 2234 |
| BspMAI | CTGCAG | 2 cut(s) | 436, 2543 |
| BspPI | GGATC | 7 cut(s) | 55, 458, 1396, 1701, 1873, 2227, 2240 |
| BspT107I | GGYRCC | 1 cut(s) | 263 |
| BspTI | CTTAAG | 1 cut(s) | 548 |
| BsrBI | CCGCTC | 1 cut(s) | 81 |
| BsrFI | RCCGGY | 1 cut(s) | 1558 |
| BsrGI | TGTACA | 2 cut(s) | 736, 808 |
| BsrI | ACTGG | 6 cut(s) | 1082, 1162, 1668, 1941, 2066, 2144 |
| BssAI | RCCGGY | 1 cut(s) | 1558 |
| BssECI | CCNNGG | 2 cut(s) | 1601, 2564 |
| BssNI | GRCGYC | 2 cut(s) | 252, 264 |
| BssSI | CACGAG | 1 cut(s) | 2250 |
| BssT1I | CCWWGG | 1 cut(s) | 2564 |
| Bst2BI | CACGAG | 1 cut(s) | 2250 |
| Bst2UI | CCWGG | 2 cut(s) | 1238, 1779 |
| Bst4CI | ACNGT | 9 cut(s) | 293, 808, 892, 1687, 2095, 2194, 2409, 2504, 2588 |
| Bst6I | CTCTTC | 3 cut(s) | 305, 1132, 1329 |
| BstACI | GRCGYC | 2 cut(s) | 252, 264 |
| BstAFI | CTTAAG | 1 cut(s) | 548 |
| BstAUI | TGTACA | 2 cut(s) | 736, 808 |
| BstC8I | GCNNGC | 3 cut(s) | 644, 2464, 2555 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 185, 1728 |
| BstF5I | GGATG | 8 cut(s) | 36, 373, 1042, 1117, 1186, 1294, 2221, 2261 |
| BstFNI | CGCG | 1 cut(s) | 198 |
| BstH2I | RGCGCY | 2 cut(s) | 267, 578 |
| BstHHI | GCGC | 2 cut(s) | 266, 577 |
| BstMAI | GTCTC | 1 cut(s) | 991 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 48, 1337, 2312, 2381, 2420, 2480 |
| BstNI | CCWGG | 2 cut(s) | 1238, 1779 |
| BstNSI | RCATGY | 2 cut(s) | 646, 2553 |
| BstSCI | CCNGG | 3 cut(s) | 1236, 1600, 1777 |
| BstSFI | CTRYAG | 5 cut(s) | 432, 765, 888, 1615, 2539 |
| BstUI | CGCG | 1 cut(s) | 198 |
| BstV1I | GCAGC | 2 cut(s) | 60, 2401 |
| BstV2I | GAAGAC | 1 cut(s) | 1490 |
| BstX2I | RGATCY | 5 cut(s) | 60, 1401, 1693, 1865, 2232 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 145 |
| BstYI | RGATCY | 5 cut(s) | 60, 1401, 1693, 1865, 2232 |
| Bsu15I | ATCGAT | 1 cut(s) | 525 |
| Bsu36I | CCTNAGG | 1 cut(s) | 492 |
| BsuI | GTATCC | 3 cut(s) | 1090, 1287, 1675 |
| BsuTUI | ATCGAT | 1 cut(s) | 525 |
| BtsCI | GGATG | 8 cut(s) | 36, 373, 1042, 1117, 1186, 1294, 2221, 2261 |
| BtsI | GCAGTG | 3 cut(s) | 1498, 2418, 2536 |
| BtsIMutI | CAGTG | 9 cut(s) | 911, 1089, 1498, 1867, 2091, 2151, 2418, 2536, 2593 |
| Cac8I | GCNNGC | 3 cut(s) | 644, 2464, 2555 |
| CaiI | CAGNNNCTG | 3 cut(s) | 910, 1397, 1778 |
| CciI | TCATGA | 1 cut(s) | 775 |
| CfoI | GCGC | 2 cut(s) | 266, 577 |
| Cfr10I | RCCGGY | 1 cut(s) | 1558 |
| Cfr13I | GGNCC | 6 cut(s) | 124, 190, 544, 1733, 1832, 2003 |
| ClaI | ATCGAT | 1 cut(s) | 525 |
| CpoI | CGGWCCG | 1 cut(s) | 124 |
| CseI | GACGC | 2 cut(s) | 187, 260 |
| Csp6I | GTAC | 6 cut(s) | 737, 809, 1056, 1077, 1464, 1683 |
| CspAI | ACCGGT | 1 cut(s) | 1558 |
| CspI | CGGWCCG | 1 cut(s) | 124 |
| CviQI | GTAC | 6 cut(s) | 737, 809, 1056, 1077, 1464, 1683 |
| DinI | GGCGCC | 1 cut(s) | 265 |
| DraI | TTTAAA | 4 cut(s) | 571, 1566, 1594, 2445 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 164, 197 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 164, 197 |
| Eam1104I | CTCTTC | 3 cut(s) | 305, 1132, 1329 |
| EarI | CTCTTC | 3 cut(s) | 305, 1132, 1329 |
| EciI | GGCGGA | 2 cut(s) | 2228, 2390 |
| Eco130I | CCWWGG | 1 cut(s) | 2564 |
| Eco24I | GRGCYC | 1 cut(s) | 519 |
| Eco32I | GATATC | 2 cut(s) | 622, 1451 |
| Eco47I | GGWCC | 6 cut(s) | 124, 190, 544, 1733, 1832, 2003 |
| Eco57I | CTGAAG | 9 cut(s) | 635, 832, 1152, 1353, 1604, 1644, 2184, 2370, 2499 |
| Eco81I | CCTNAGG | 1 cut(s) | 492 |
| Eco88I | CYCGRG | 2 cut(s) | 82, 233 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 185, 1728 |
| EcoO109I | RGGNCCY | 3 cut(s) | 190, 1733, 2003 |
| EcoRI | GAATTC | 1 cut(s) | 2150 |
| EcoRII | CCWGG | 2 cut(s) | 1236, 1777 |
| EcoRV | GATATC | 2 cut(s) | 622, 1451 |
| EcoT14I | CCWWGG | 1 cut(s) | 2564 |
| EcoT22I | ATGCAT | 1 cut(s) | 1902 |
| EcoT38I | GRGCYC | 1 cut(s) | 519 |
| EgeI | GGCGCC | 1 cut(s) | 265 |
| EheI | GGCGCC | 1 cut(s) | 265 |
| ErhI | CCWWGG | 1 cut(s) | 2564 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2220, 2252 |
| FaqI | GGGAC | 2 cut(s) | 1976, 1983 |
| FauI | CCCGC | 2 cut(s) | 53, 86 |
| FbaI | TGATCA | 2 cut(s) | 316, 901 |
| Fnu4HI | GCNGC | 3 cut(s) | 49, 230, 2415 |
| FokI | GGATG | 8 cut(s) | 23, 380, 1049, 1124, 1193, 1281, 2228, 2268 |
| FriOI | GRGCYC | 1 cut(s) | 519 |
| Fsp4HI | GCNGC | 3 cut(s) | 49, 230, 2415 |
| FspBI | CTAG | 4 cut(s) | 111, 647, 834, 1730 |
| GlaI | GCGC | 2 cut(s) | 265, 576 |
| GluI | GCNGC | 3 cut(s) | 49, 230, 2415 |
| GsaI | CCCAGC | 1 cut(s) | 582 |
| GsuI | CTGGAG | 1 cut(s) | 342 |
| HaeII | RGCGCY | 2 cut(s) | 267, 578 |
| HapII | CCGG | 8 cut(s) | 127, 261, 287, 456, 467, 700, 1559, 1601 |
| HgaI | GACGC | 2 cut(s) | 187, 260 |
| HhaI | GCGC | 2 cut(s) | 266, 577 |
| Hin1I | GRCGYC | 2 cut(s) | 252, 264 |
| Hin6I | GCGC | 2 cut(s) | 264, 575 |
| HinP1I | GCGC | 2 cut(s) | 264, 575 |
| HincII | GTYRAC | 1 cut(s) | 1907 |
| HindII | GTYRAC | 1 cut(s) | 1907 |
| HindIII | AAGCTT | 1 cut(s) | 707 |
| HpaII | CCGG | 8 cut(s) | 127, 261, 287, 456, 467, 700, 1559, 1601 |
| HphI | GGTGA | 5 cut(s) | 477, 616, 873, 1337, 2464 |
| Hpy166II | GTNNAC | 5 cut(s) | 1056, 1079, 1907, 1925, 1934 |
| Hpy8I | GTNNAC | 5 cut(s) | 1056, 1079, 1907, 1925, 1934 |
| Hpy99I | CGWCG | 2 cut(s) | 161, 254 |
| HpyAV | CCTTC | 4 cut(s) | 493, 610, 1244, 2034 |
| HpyCH4III | ACNGT | 9 cut(s) | 293, 808, 892, 1687, 2095, 2194, 2409, 2504, 2588 |
| HpyCH4IV | ACGT | 2 cut(s) | 105, 165 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 48, 1337, 2312, 2381, 2420, 2480 |
| HpySE526I | ACGT | 2 cut(s) | 105, 165 |
| Hsp92I | GRCGYC | 2 cut(s) | 252, 264 |
| HspAI | GCGC | 2 cut(s) | 264, 575 |
| KasI | GGCGCC | 1 cut(s) | 263 |
| Kpn2I | TCCGGA | 2 cut(s) | 466, 699 |
| Ksp22I | TGATCA | 2 cut(s) | 316, 901 |
| LmnI | GCTCC | 4 cut(s) | 72, 119, 361, 458 |
| Lsp1109I | GCAGC | 2 cut(s) | 60, 2401 |
| MaeI | CTAG | 4 cut(s) | 111, 647, 834, 1730 |
| MaeII | ACGT | 2 cut(s) | 105, 165 |
| MaeIII | GTNAC | 5 cut(s) | 106, 1355, 2068, 2203, 2437 |
| MbiI | CCGCTC | 1 cut(s) | 81 |
| MfeI | CAATTG | 1 cut(s) | 1796 |
| MflI | RGATCY | 5 cut(s) | 60, 1401, 1693, 1865, 2232 |
| MhlI | GDGCHC | 1 cut(s) | 519 |
| Mly113I | GGCGCC | 1 cut(s) | 264 |
| MlyI | GAGTC | 5 cut(s) | 128, 380, 547, 2259, 2292 |
| MmeI | TCCRAC | 3 cut(s) | 102, 180, 1315 |
| Mph1103I | ATGCAT | 1 cut(s) | 1902 |
| MroI | TCCGGA | 2 cut(s) | 466, 699 |
| MroXI | GAANNNNTTC | 3 cut(s) | 870, 996, 1212 |
| MslI | CAYNNNNRTG | 5 cut(s) | 1308, 1509, 1958, 2075, 2254 |
| MspA1I | CMGCKG | 2 cut(s) | 799, 2414 |
| MspCI | CTTAAG | 1 cut(s) | 548 |
| MspI | CCGG | 8 cut(s) | 127, 261, 287, 456, 467, 700, 1559, 1601 |
| MspR9I | CCNGG | 3 cut(s) | 1238, 1602, 1779 |
| MunI | CAATTG | 1 cut(s) | 1796 |
| Mva1269I | GAATGC | 1 cut(s) | 606 |
| MvaI | CCWGG | 2 cut(s) | 1238, 1779 |
| MvnI | CGCG | 1 cut(s) | 198 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 48, 1337, 2312, 2381, 2420, 2480 |
| NarI | GGCGCC | 1 cut(s) | 264 |
| NciI | CCSGG | 1 cut(s) | 1602 |
| NlaIV | GGNNCC | 5 cut(s) | 265, 454, 460, 2004, 2234 |
| NmuCI | GTSAC | 4 cut(s) | 106, 1355, 2068, 2437 |
| NsiI | ATGCAT | 1 cut(s) | 1902 |
| NspI | RCATGY | 2 cut(s) | 646, 2553 |
| OliI | CACNNNNGTG | 1 cut(s) | 2075 |
| PaeI | GCATGC | 1 cut(s) | 646 |
| PagI | TCATGA | 1 cut(s) | 775 |
| PctI | GAATGC | 1 cut(s) | 606 |
| PdmI | GAANNNNTTC | 3 cut(s) | 870, 996, 1212 |
| PflFI | GACNNNGTC | 1 cut(s) | 1955 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 671 |
| PinAI | ACCGGT | 1 cut(s) | 1558 |
| PkrI | GCNGC | 3 cut(s) | 50, 231, 2416 |
| PleI | GAGTC | 5 cut(s) | 127, 379, 547, 2259, 2292 |
| PluTI | GGCGCC | 1 cut(s) | 267 |
| PpsI | GAGTC | 5 cut(s) | 127, 379, 547, 2259, 2292 |
| PpuMI | RGGWCCY | 3 cut(s) | 190, 1733, 2003 |
| PshBI | ATTAAT | 1 cut(s) | 1500 |
| Psp5II | RGGWCCY | 3 cut(s) | 190, 1733, 2003 |
| Psp6I | CCWGG | 2 cut(s) | 1236, 1777 |
| PspFI | CCCAGC | 1 cut(s) | 578 |
| PspGI | CCWGG | 2 cut(s) | 1236, 1777 |
| PspN4I | GGNNCC | 5 cut(s) | 265, 454, 460, 2004, 2234 |
| PspPI | GGNCC | 6 cut(s) | 124, 190, 544, 1733, 1832, 2003 |
| PspPPI | RGGWCCY | 3 cut(s) | 190, 1733, 2003 |
| PstI | CTGCAG | 2 cut(s) | 436, 2543 |
| PstNI | CAGNNNCTG | 3 cut(s) | 910, 1397, 1778 |
| PsuI | RGATCY | 5 cut(s) | 60, 1401, 1693, 1865, 2232 |
| PsyI | GACNNNGTC | 1 cut(s) | 1955 |
| PvuII | CAGCTG | 2 cut(s) | 799, 2414 |
| RsaI | GTAC | 6 cut(s) | 738, 810, 1057, 1078, 1465, 1684 |
| RsaNI | GTAC | 6 cut(s) | 737, 809, 1056, 1077, 1464, 1683 |
| RseI | CAYNNNNRTG | 5 cut(s) | 1308, 1509, 1958, 2075, 2254 |
| Rsr2I | CGGWCCG | 1 cut(s) | 124 |
| RsrII | CGGWCCG | 1 cut(s) | 124 |
| SatI | GCNGC | 3 cut(s) | 49, 230, 2415 |
| Sau96I | GGNCC | 6 cut(s) | 124, 190, 544, 1733, 1832, 2003 |
| ScaI | AGTACT | 1 cut(s) | 1684 |
| SchI | GAGTC | 5 cut(s) | 128, 380, 547, 2259, 2292 |
| ScrFI | CCNGG | 3 cut(s) | 1238, 1602, 1779 |
| SduI | GDGCHC | 1 cut(s) | 519 |
| SfcI | CTRYAG | 5 cut(s) | 432, 765, 888, 1615, 2539 |
| SfoI | GGCGCC | 1 cut(s) | 265 |
| SinI | GGWCC | 6 cut(s) | 124, 190, 544, 1733, 1832, 2003 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 1308, 1509, 1958, 2075, 2254 |
| SmlI | CTYRAG | 1 cut(s) | 548 |
| SmoI | CTYRAG | 1 cut(s) | 548 |
| SphI | GCATGC | 1 cut(s) | 646 |
| SspDI | GGCGCC | 1 cut(s) | 263 |
| SspMI | CTAG | 4 cut(s) | 111, 647, 834, 1730 |
| StyD4I | CCNGG | 3 cut(s) | 1236, 1600, 1777 |
| StyI | CCWWGG | 1 cut(s) | 2564 |
| TaaI | ACNGT | 9 cut(s) | 293, 808, 892, 1687, 2095, 2194, 2409, 2504, 2588 |
| TaiI | ACGT | 2 cut(s) | 108, 168 |
| TaqI | TCGA | 5 cut(s) | 13, 324, 525, 556, 2296 |
| TatI | WGTACW | 6 cut(s) | 736, 808, 1055, 1076, 1463, 1682 |
| TauI | GCSGC | 1 cut(s) | 232 |
| TscAI | CASTG | 9 cut(s) | 911, 1089, 1498, 1867, 2098, 2151, 2425, 2543, 2593 |
| TseFI | GTSAC | 4 cut(s) | 106, 1355, 2068, 2437 |
| TseI | GCWGC | 2 cut(s) | 48, 2414 |
| Tsp45I | GTSAC | 4 cut(s) | 106, 1355, 2068, 2437 |
| TspGWI | ACGGA | 2 cut(s) | 522, 1049 |
| TspRI | CASTG | 9 cut(s) | 911, 1089, 1498, 1867, 2098, 2151, 2425, 2543, 2593 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1955 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 671 |
| Vha464I | CTTAAG | 1 cut(s) | 548 |
| VpaK11BI | GGWCC | 6 cut(s) | 124, 190, 544, 1733, 1832, 2003 |
| VspI | ATTAAT | 1 cut(s) | 1500 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 185, 1728 |
| XapI | RAATTY | 5 cut(s) | 394, 427, 757, 1837, 2150 |
| XceI | RCATGY | 2 cut(s) | 646, 2553 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 28 |
| XmnI | GAANNNNTTC | 3 cut(s) | 870, 996, 1212 |
| XspI | CTAG | 4 cut(s) | 111, 647, 834, 1730 |
| ZrmI | AGTACT | 1 cut(s) | 1684 |
| Zsp2I | ATGCAT | 1 cut(s) | 1902 |