Rmu_sc0001238.1_g000004

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001238.1
OG0011107
Physical Location & Seq
Reverse (-)
22289 .. 26882
4594 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001238.1_g000004.1.cds

Sequence Viewer

Length: 2556 bp
atggaagcaaatcgaactcccaagcgacctctgggcatccgcacccgcagccaatccgagatccagctccaccgcacccgctcgggtcgggtcatcaacagctaccacactagctccgagtcggaccggaaaagacccagaccaatggattcttccgacgccaacgtcctcctcaactccctgattaaggacctccgcgtcaaacgggtcttttcccaaacctacaagccgcccgagaatctaatcaacgacgccaaatccagcgccgtattctctctggctgaaccggacggtaattcaaaggaggcgaagagtgatcaggtcgagagttgtggaaatcggtttgattgctcagctccagatatggataagtccaagagtaaagaacctgaaaatttgggattagggtttctggctgaatccccaaattctgcagataagattggcggtggttccggttccgatccggaatcttctcagacctcaccacctgaggcgaaggcaaatggagttgagctcaaaatcgataacgaaaccaaaatggtccttaagactcgaaagagagtgtttaaagcgcccagctcgtttagttatagaagaatgcttccttatctgaaggatatcaccaaagacaactcttgcatgctagatttctgtgaattgccaaatcgtggtaaaggtttggaaggaaaatctttccgggagtgtcatgagattgattgttctactcagctggaaactgtacaagtttcttcccatgttttatctagtggtaatgacttcagttcagaatctcctgaatatgttcctaaatcaccgcctatagtagtggttgatcagtgtctgccaaagccacctgttgatggacagaatgagaaaattgatttgggagtatcttgtgaagttcagaagttaaatgtctcagaaccttttggcacttcagctatggaggattctcaaattaacatggatggtgtaatggtcatgtgtactgatgataatacaccagtagagaatgtggatactgctgttaaggatgatattgtgtcctcttccgaagatcaaaatgtgaaagacataaatccccagtcatcttcaatcatggatgacagatattcatctagggccaatgaagtggttcagcacaaggaaaactcaaaccaggctcagaatgaagggattagaaaaactgaaatggggtatccttgtaaagtccgacatccaaatcatataaatgaccagagagttggtaatgctgaagaggctttgaatcagatatgtgacttgaatgaagaatctatccagatgacaccgccagatgctgagatccttgataaattacaagtggaagtaaaaggaattggtagagccggatatcttcatcagagtacagatcaaggtcttgggaagacaagcagtggaattaatcataaagatgcttcgtgggttgatcttggacatgaatgtagtcctaagagaaaaccggttttaaatccatgttcaaggctgaagttatttaaaagtccggggtcagtcagctataaaagattgcttccatttcttatgaatatggaaaaaaggacttcagtatccagtcattttgaaagtactgttaaggatctggaacaaaggcaaccaccgactccctctcagctaggacctccgatggataaatcaaatgttgttttgtttcatacagagcctggcacaacaacacctcaattggcaaatgctaatggttcatctaatgttgatggaccaaatttaacatttcctaaatgtgtcagtggatctcaaatgtcatctaatgtacaaaaggaaatgcatggtcaacattctgtgtcaggtaaacagagtaaactggacatttcccctgacattgtcatgagtttgggacaggaagctgaactacctgtccctatattgggtcctaataagactgaatctccttccgaaaaagatggtgcaagaatatcccatccagaattaccagtcacaagggtgttatctcttggcactgtcaaggactgcatacgctcaaaagcaaccttaactgatggtgggaagccggtggaagccaattacttgggtcataactcatctgaaattgatgccacagtttcttcagttactcaggcggatgcagtcagaaaagggatccttaaaagaaatccacgaggatgcagaggactctgcacttgtttgaattgtgcctcgtttcgactccatgcagagagagcatttgagttctcgcaaaatcagatgcaagatgctgaagaagtagctttggatttgatggcggaattatcaaaattgcgtaaactattagaaaagtcagctgccactgcaaatgatgatgtcgtcactttaaatgaggtgaaaagtgcttgcaggaaagcgtctaaagcagaagtccttgcaagaaaccgtcttggggaaatgaattatgatctcaacattcactgcagaatcacatgcttgcatgaaccaagggtcaggtttgcaaatcacagtgaagaaaaagtcattccaaaagcaaagtgttcaagtgattag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

851

Amino Acids

93.47

Weight (kDa)

6.26

Isoelectric Point (pI)

48.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011107)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G23740 AT4G14120
fragaria_vesca FvH4_4g12980 FvH4_4g12980 FvH4_4g12980 FvH4_4g12980
malus_domestica MD04G1019900.v1.1
prunus_persica Prupe.1G169400_v2.0.a1
pyrus_communis pycom04g01590
rosa_chinensis RchiOBHm_Chr4g0412661
rosa_laevigata RLG00000008269
rosa_multiflora Rmu_co8037358.1_g000001 Rmu_sc0001238.1_g000004
rosa_roxburghii Rroxscaffold_5G00356860
rosa_rugosa Rorug04G0115700
rosa_samantha Rh4AG174900 Rh4BG174300 Rh4CG185800 Rh4DG170800
rosa_wichuraiana Rw4G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 164, 197
AccB7I CCANNNNNTGG 1 cut(s) 671
AccBSI CCGCTC 1 cut(s) 81
AccII CGCG 1 cut(s) 198
AccIII TCCGGA 1 cut(s) 466
AclWI GGATC 7 cut(s) 55, 458, 1321, 1626, 1798, 2152, 2165
AcsI RAATTY 3 cut(s) 394, 427, 1762
AcuI CTGAAG 8 cut(s) 635, 766, 924, 1278, 1529, 1569, 2109, 2295
AcyI GRCGYC 2 cut(s) 159, 252
AfaI GTAC 5 cut(s) 744, 991, 1390, 1609, 1812
AfiI CCNNNNNNNGG 6 cut(s) 187, 671, 863, 1924, 1925, 2434
AflII CTTAAG 1 cut(s) 548
AgeI ACCGGT 1 cut(s) 1483
AgsI TTSAA 8 cut(s) 300, 1098, 1270, 1288, 1503, 1604, 2206, 2547
AjnI CCWGG 2 cut(s) 1161, 1702
AjuI GAANNNNNNNTTGG 4 cut(s) 136, 168, 869, 901
AleI CACNNNNGTG 1 cut(s) 2000
AloI GAACNNNNNNTCC 2 cut(s) 1899, 1931
Alw21I GWGCWC 1 cut(s) 519
Alw26I GTCTC 1 cut(s) 925
AlwI GGATC 7 cut(s) 55, 458, 1321, 1626, 1798, 2152, 2165
AlwNI CAGNNNCTG 3 cut(s) 844, 1322, 1703
Ama87I CYCGRG 2 cut(s) 82, 233
Aor13HI TCCGGA 1 cut(s) 466
AoxI GGCC 1 cut(s) 1125
ApeKI GCWGC 2 cut(s) 48, 2339
ApoI RAATTY 3 cut(s) 394, 427, 1762
AseI ATTAAT 1 cut(s) 1425
AsiGI ACCGGT 1 cut(s) 1483
Asp700I GAANNNNTTC 2 cut(s) 804, 1137
AspLEI GCGC 2 cut(s) 266, 577
AspS9I GGNCC 7 cut(s) 124, 190, 544, 1125, 1658, 1757, 1928
AsuC2I CCSGG 2 cut(s) 701, 1527
AsuHPI GGTGA 4 cut(s) 477, 616, 807, 2389
AvaI CYCGRG 2 cut(s) 82, 233
AvaII GGWCC 6 cut(s) 124, 190, 544, 1658, 1757, 1928
AxyI CCTNAGG 1 cut(s) 492
BaeI ACNNNNGTAYC 4 cut(s) 1014, 1047, 1572, 1605
BamHI GGATCC 1 cut(s) 2157
BanII GRGCYC 1 cut(s) 519
BarI GAAGNNNNNNTAC 2 cut(s) 1893, 1925
BauI CACGAG 1 cut(s) 2175
BbsI GAAGAC 1 cut(s) 1415
Bbv12I GWGCWC 1 cut(s) 519
BbvI GCAGC 2 cut(s) 60, 2326
BccI CCATC 8 cut(s) 857, 965, 1660, 1748, 1955, 1986, 2051, 2290
BceAI ACGGC 1 cut(s) 251
BciT130I CCWGG 2 cut(s) 1163, 1704
BciVI GTATCC 3 cut(s) 1015, 1212, 1600
BclI TGATCA 2 cut(s) 316, 835
BcnI CCSGG 2 cut(s) 701, 1527
BcoDI GTCTC 1 cut(s) 925
BfaI CTAG 5 cut(s) 111, 647, 768, 1122, 1655
BfmI CTRYAG 3 cut(s) 432, 822, 2464
BfoI RGCGCY 2 cut(s) 267, 578
BfrI CTTAAG 1 cut(s) 548
BfuI GTATCC 3 cut(s) 1015, 1212, 1600
BisI GCNGC 3 cut(s) 49, 230, 2340
BlpI GCTNAGC 1 cut(s) 352
BlsI GCNGC 3 cut(s) 50, 231, 2341
BmcAI AGTACT 1 cut(s) 1609
Bme1390I CCNGG 4 cut(s) 701, 1163, 1527, 1704
Bme18I GGWCC 6 cut(s) 124, 190, 544, 1658, 1757, 1928
BmeT110I CYCGRG 2 cut(s) 82, 233
BmgT120I GGNCC 7 cut(s) 124, 190, 544, 1125, 1658, 1757, 1928
BmiI GGNNCC 4 cut(s) 454, 460, 1929, 2159
BmrFI CCNGG 4 cut(s) 701, 1163, 1527, 1704
BmrI ACTGGG 1 cut(s) 1081
BmsI GCATC 8 cut(s) 45, 1309, 1426, 2101, 2131, 2171, 2253, 2260
BmuI ACTGGG 1 cut(s) 1081
BpiI GAAGAC 1 cut(s) 1415
BplI GAGNNNNNCTC 2 cut(s) 501, 533
BpmI CTGGAG 1 cut(s) 342
Bpu1102I GCTNAGC 1 cut(s) 352
BpuMI CCSGG 2 cut(s) 701, 1527
Bsa29I ATCGAT 1 cut(s) 525
BsaBI GATNNNNATC 1 cut(s) 1117
BsaHI GRCGYC 2 cut(s) 159, 252
BsaJI CCNNGG 2 cut(s) 1526, 2489
BsaWI WCCGGW 5 cut(s) 126, 286, 455, 466, 1483
BsaXI ACNNNNNCTCC 4 cut(s) 98, 128, 1930, 1960
Bsc4I CCNNNNNNNGG 6 cut(s) 187, 671, 863, 1924, 1925, 2434
Bse118I RCCGGY 2 cut(s) 1483, 2068
Bse1I ACTGG 5 cut(s) 1007, 1087, 1593, 1866, 1991
Bse21I CCTNAGG 1 cut(s) 492
Bse8I GATNNNNATC 1 cut(s) 1117
BseAI TCCGGA 1 cut(s) 466
BseBI CCWGG 2 cut(s) 1163, 1704
BseCI ATCGAT 1 cut(s) 525
BseDI CCNNGG 2 cut(s) 1526, 2489
BseGI GGATG 8 cut(s) 36, 976, 1042, 1111, 1219, 1978, 2146, 2186
BseJI GATNNNNATC 1 cut(s) 1117
BseLI CCNNNNNNNGG 6 cut(s) 187, 671, 863, 1924, 1925, 2434
BseMII CTCAG 9 cut(s) 366, 483, 491, 743, 936, 1181, 1314, 1664, 2147
BseNI ACTGG 5 cut(s) 1007, 1087, 1593, 1866, 1991
BseRI GAGGAG 1 cut(s) 161
BseXI GCAGC 2 cut(s) 60, 2326
BseYI CCCAGC 1 cut(s) 578
BsgI GTGCAG 1 cut(s) 2179
Bsh1236I CGCG 1 cut(s) 198
BshFI GGCC 1 cut(s) 1127
BshTI ACCGGT 1 cut(s) 1483
BshVI ATCGAT 1 cut(s) 525
BsiHKAI GWGCWC 1 cut(s) 519
BsiHKCI CYCGRG 2 cut(s) 82, 233
BsiSI CCGG 9 cut(s) 127, 287, 456, 467, 700, 1371, 1484, 1526, 2069
BslFI GGGAC 2 cut(s) 1901, 1908
BslI CCNNNNNNNGG 6 cut(s) 187, 671, 863, 1924, 1925, 2434
BsmAI GTCTC 1 cut(s) 925
BsmFI GGGAC 2 cut(s) 1901, 1908
BsmI GAATGC 1 cut(s) 606
BsnI GGCC 1 cut(s) 1127
BsoBI CYCGRG 2 cut(s) 82, 233
Bsp1286I GDGCHC 1 cut(s) 519
Bsp13I TCCGGA 1 cut(s) 466
Bsp1407I TGTACA 2 cut(s) 742, 1810
Bsp1720I GCTNAGC 1 cut(s) 352
BspANI GGCC 1 cut(s) 1127
BspCNI CTCAG 9 cut(s) 365, 484, 490, 742, 935, 1180, 1315, 1663, 2146
BspDI ATCGAT 1 cut(s) 525
BspEI TCCGGA 1 cut(s) 466
BspFNI CGCG 1 cut(s) 198
BspHI TCATGA 2 cut(s) 709, 1884
BspLI GGNNCC 4 cut(s) 454, 460, 1929, 2159
BspMAI CTGCAG 2 cut(s) 436, 2468
BspPI GGATC 7 cut(s) 55, 458, 1321, 1626, 1798, 2152, 2165
BspTI CTTAAG 1 cut(s) 548
BsrBI CCGCTC 1 cut(s) 81
BsrFI RCCGGY 2 cut(s) 1483, 2068
BsrGI TGTACA 2 cut(s) 742, 1810
BsrI ACTGG 5 cut(s) 1007, 1087, 1593, 1866, 1991
BssAI RCCGGY 2 cut(s) 1483, 2068
BssECI CCNNGG 2 cut(s) 1526, 2489
BssNI GRCGYC 2 cut(s) 159, 252
BssSI CACGAG 1 cut(s) 2175
BssT1I CCWWGG 1 cut(s) 2489
Bst2BI CACGAG 1 cut(s) 2175
Bst2UI CCWGG 2 cut(s) 1163, 1704
Bst4CI ACNGT 7 cut(s) 293, 742, 1612, 2020, 2119, 2429, 2513
Bst6I CTCTTC 3 cut(s) 305, 1057, 1254
BstACI GRCGYC 2 cut(s) 159, 252
BstAFI CTTAAG 1 cut(s) 548
BstAUI TGTACA 2 cut(s) 742, 1810
BstC8I GCNNGC 3 cut(s) 644, 2389, 2480
BstENI CCTNNNNNAGG 1 cut(s) 185
BstF5I GGATG 8 cut(s) 36, 976, 1042, 1111, 1219, 1978, 2146, 2186
BstFNI CGCG 1 cut(s) 198
BstH2I RGCGCY 2 cut(s) 267, 578
BstHHI GCGC 2 cut(s) 266, 577
BstMAI GTCTC 1 cut(s) 925
BstMWI GCNNNNNNNGC 5 cut(s) 48, 1262, 2237, 2345, 2405
BstNI CCWGG 2 cut(s) 1163, 1704
BstNSI RCATGY 2 cut(s) 646, 2478
BstSCI CCNGG 4 cut(s) 699, 1161, 1525, 1702
BstSFI CTRYAG 3 cut(s) 432, 822, 2464
BstUI CGCG 1 cut(s) 198
BstV1I GCAGC 2 cut(s) 60, 2326
BstV2I GAAGAC 1 cut(s) 1415
BstX2I RGATCY 5 cut(s) 60, 1326, 1618, 1790, 2157
BstXI CCANNNNNNTGG 4 cut(s) 145, 1135, 1247, 2086
BstYI RGATCY 5 cut(s) 60, 1326, 1618, 1790, 2157
Bsu15I ATCGAT 1 cut(s) 525
Bsu36I CCTNAGG 1 cut(s) 492
BsuI GTATCC 3 cut(s) 1015, 1212, 1600
BsuRI GGCC 1 cut(s) 1127
BsuTUI ATCGAT 1 cut(s) 525
BtsCI GGATG 8 cut(s) 36, 976, 1042, 1111, 1219, 1978, 2146, 2186
BtsI GCAGTG 3 cut(s) 1423, 2343, 2461
BtsIMutI CAGTG 7 cut(s) 845, 1423, 1792, 2016, 2343, 2461, 2518
Cac8I GCNNGC 3 cut(s) 644, 2389, 2480
CaiI CAGNNNCTG 3 cut(s) 844, 1322, 1703
CciI TCATGA 2 cut(s) 709, 1884
CfoI GCGC 2 cut(s) 266, 577
Cfr10I RCCGGY 2 cut(s) 1483, 2068
Cfr13I GGNCC 7 cut(s) 124, 190, 544, 1125, 1658, 1757, 1928
ClaI ATCGAT 1 cut(s) 525
CpoI CGGWCCG 1 cut(s) 124
CseI GACGC 4 cut(s) 167, 187, 260, 2388
Csp6I GTAC 5 cut(s) 743, 990, 1389, 1608, 1811
CspAI ACCGGT 1 cut(s) 1483
CspI CGGWCCG 1 cut(s) 124
CviQI GTAC 5 cut(s) 743, 990, 1389, 1608, 1811
DraI TTTAAA 4 cut(s) 571, 1491, 1519, 2370
DrdI GACNNNNNNGTC 2 cut(s) 164, 197
DseDI GACNNNNNNGTC 2 cut(s) 164, 197
Eam1104I CTCTTC 3 cut(s) 305, 1057, 1254
EarI CTCTTC 3 cut(s) 305, 1057, 1254
EciI GGCGGA 2 cut(s) 2153, 2315
Ecl136II GAGCTC 1 cut(s) 517
Eco130I CCWWGG 1 cut(s) 2489
Eco24I GRGCYC 1 cut(s) 519
Eco32I GATATC 2 cut(s) 622, 1376
Eco47I GGWCC 6 cut(s) 124, 190, 544, 1658, 1757, 1928
Eco53kI GAGCTC 1 cut(s) 517
Eco57I CTGAAG 8 cut(s) 635, 766, 924, 1278, 1529, 1569, 2109, 2295
Eco81I CCTNAGG 1 cut(s) 492
Eco88I CYCGRG 2 cut(s) 82, 233
EcoICRI GAGCTC 1 cut(s) 517
EcoNI CCTNNNNNAGG 1 cut(s) 185
EcoO109I RGGNCCY 3 cut(s) 190, 1658, 1928
EcoRII CCWGG 2 cut(s) 1161, 1702
EcoRV GATATC 2 cut(s) 622, 1376
EcoT14I CCWWGG 1 cut(s) 2489
EcoT22I ATGCAT 1 cut(s) 1827
EcoT38I GRGCYC 1 cut(s) 519
ErhI CCWWGG 1 cut(s) 2489
FalI AAGNNNNNCTT 2 cut(s) 2145, 2177
FaqI GGGAC 2 cut(s) 1901, 1908
FauI CCCGC 2 cut(s) 53, 86
FbaI TGATCA 2 cut(s) 316, 835
Fnu4HI GCNGC 3 cut(s) 49, 230, 2340
FokI GGATG 8 cut(s) 23, 983, 1049, 1118, 1206, 1965, 2153, 2193
FriOI GRGCYC 1 cut(s) 519
Fsp4HI GCNGC 3 cut(s) 49, 230, 2340
FspBI CTAG 5 cut(s) 111, 647, 768, 1122, 1655
GlaI GCGC 2 cut(s) 265, 576
GluI GCNGC 3 cut(s) 49, 230, 2340
GsaI CCCAGC 1 cut(s) 582
GsuI CTGGAG 1 cut(s) 342
HaeII RGCGCY 2 cut(s) 267, 578
HaeIII GGCC 1 cut(s) 1127
HapII CCGG 9 cut(s) 127, 287, 456, 467, 700, 1371, 1484, 1526, 2069
HgaI GACGC 4 cut(s) 167, 187, 260, 2388
HhaI GCGC 2 cut(s) 266, 577
Hin1I GRCGYC 2 cut(s) 159, 252
Hin6I GCGC 2 cut(s) 264, 575
HinP1I GCGC 2 cut(s) 264, 575
HincII GTYRAC 1 cut(s) 1832
HindII GTYRAC 1 cut(s) 1832
HpaII CCGG 9 cut(s) 127, 287, 456, 467, 700, 1371, 1484, 1526, 2069
HphI GGTGA 4 cut(s) 477, 616, 807, 2389
Hpy166II GTNNAC 5 cut(s) 990, 1832, 1850, 1859, 2321
Hpy188III TCNNGA 9 cut(s) 325, 359, 467, 710, 797, 1303, 1622, 1885, 1982
Hpy8I GTNNAC 5 cut(s) 990, 1832, 1850, 1859, 2321
Hpy99I CGWCG 2 cut(s) 161, 254
HpyAV CCTTC 5 cut(s) 493, 610, 680, 1169, 1959
HpyCH4III ACNGT 7 cut(s) 293, 742, 1612, 2020, 2119, 2429, 2513
HpyCH4IV ACGT 1 cut(s) 165
HpyF10VI GCNNNNNNNGC 5 cut(s) 48, 1262, 2237, 2345, 2405
HpySE526I ACGT 1 cut(s) 165
Hsp92I GRCGYC 2 cut(s) 159, 252
HspAI GCGC 2 cut(s) 264, 575
Kpn2I TCCGGA 1 cut(s) 466
Ksp22I TGATCA 2 cut(s) 316, 835
LmnI GCTCC 3 cut(s) 72, 119, 361
Lsp1109I GCAGC 2 cut(s) 60, 2326
LweI GCATC 8 cut(s) 45, 1309, 1426, 2101, 2131, 2171, 2253, 2260
MaeI CTAG 5 cut(s) 111, 647, 768, 1122, 1655
MaeII ACGT 1 cut(s) 165
MaeIII GTNAC 4 cut(s) 1280, 1993, 2128, 2362
MbiI CCGCTC 1 cut(s) 81
MfeI CAATTG 1 cut(s) 1721
MflI RGATCY 5 cut(s) 60, 1326, 1618, 1790, 2157
MhlI GDGCHC 1 cut(s) 519
MlyI GAGTC 5 cut(s) 128, 547, 1636, 2184, 2217
MmeI TCCRAC 3 cut(s) 102, 180, 1240
Mph1103I ATGCAT 1 cut(s) 1827
MroI TCCGGA 1 cut(s) 466
MroXI GAANNNNTTC 2 cut(s) 804, 1137
MslI CAYNNNNRTG 5 cut(s) 1233, 1434, 1883, 2000, 2179
MspA1I CMGCKG 2 cut(s) 733, 2339
MspCI CTTAAG 1 cut(s) 548
MspI CCGG 9 cut(s) 127, 287, 456, 467, 700, 1371, 1484, 1526, 2069
MspR9I CCNGG 4 cut(s) 701, 1163, 1527, 1704
MunI CAATTG 1 cut(s) 1721
Mva1269I GAATGC 1 cut(s) 606
MvaI CCWGG 2 cut(s) 1163, 1704
MvnI CGCG 1 cut(s) 198
MwoI GCNNNNNNNGC 5 cut(s) 48, 1262, 2237, 2345, 2405
NciI CCSGG 2 cut(s) 701, 1527
NlaIV GGNNCC 4 cut(s) 454, 460, 1929, 2159
NmuCI GTSAC 3 cut(s) 1280, 1993, 2362
NsiI ATGCAT 1 cut(s) 1827
NspI RCATGY 2 cut(s) 646, 2478
OliI CACNNNNGTG 1 cut(s) 2000
PaeI GCATGC 1 cut(s) 646
PagI TCATGA 2 cut(s) 709, 1884
PctI GAATGC 1 cut(s) 606
PdmI GAANNNNTTC 2 cut(s) 804, 1137
PflFI GACNNNGTC 1 cut(s) 1880
PflMI CCANNNNNTGG 1 cut(s) 671
PfoI TCCNGGA 1 cut(s) 699
PinAI ACCGGT 1 cut(s) 1483
PkrI GCNGC 3 cut(s) 50, 231, 2341
PleI GAGTC 5 cut(s) 127, 547, 1636, 2184, 2217
PpsI GAGTC 5 cut(s) 127, 547, 1636, 2184, 2217
PpuMI RGGWCCY 3 cut(s) 190, 1658, 1928
PshBI ATTAAT 1 cut(s) 1425
Psp124BI GAGCTC 1 cut(s) 519
Psp5II RGGWCCY 3 cut(s) 190, 1658, 1928
Psp6I CCWGG 2 cut(s) 1161, 1702
PspFI CCCAGC 1 cut(s) 578
PspGI CCWGG 2 cut(s) 1161, 1702
PspN4I GGNNCC 4 cut(s) 454, 460, 1929, 2159
PspPI GGNCC 7 cut(s) 124, 190, 544, 1125, 1658, 1757, 1928
PspPPI RGGWCCY 3 cut(s) 190, 1658, 1928
PstI CTGCAG 2 cut(s) 436, 2468
PstNI CAGNNNCTG 3 cut(s) 844, 1322, 1703
PsuI RGATCY 5 cut(s) 60, 1326, 1618, 1790, 2157
PsyI GACNNNGTC 1 cut(s) 1880
PvuII CAGCTG 2 cut(s) 733, 2339
RsaI GTAC 5 cut(s) 744, 991, 1390, 1609, 1812
RsaNI GTAC 5 cut(s) 743, 990, 1389, 1608, 1811
RseI CAYNNNNRTG 5 cut(s) 1233, 1434, 1883, 2000, 2179
Rsr2I CGGWCCG 1 cut(s) 124
RsrII CGGWCCG 1 cut(s) 124
SacI GAGCTC 1 cut(s) 519
SatI GCNGC 3 cut(s) 49, 230, 2340
Sau96I GGNCC 7 cut(s) 124, 190, 544, 1125, 1658, 1757, 1928
ScaI AGTACT 1 cut(s) 1609
SchI GAGTC 5 cut(s) 128, 547, 1636, 2184, 2217
ScrFI CCNGG 4 cut(s) 701, 1163, 1527, 1704
SduI GDGCHC 1 cut(s) 519
SfaNI GCATC 8 cut(s) 45, 1309, 1426, 2101, 2131, 2171, 2253, 2260
SfcI CTRYAG 3 cut(s) 432, 822, 2464
SinI GGWCC 6 cut(s) 124, 190, 544, 1658, 1757, 1928
SmiMI CAYNNNNRTG 5 cut(s) 1233, 1434, 1883, 2000, 2179
SmlI CTYRAG 1 cut(s) 548
SmoI CTYRAG 1 cut(s) 548
SphI GCATGC 1 cut(s) 646
SspMI CTAG 5 cut(s) 111, 647, 768, 1122, 1655
SstI GAGCTC 1 cut(s) 519
StyD4I CCNGG 4 cut(s) 699, 1161, 1525, 1702
StyI CCWWGG 1 cut(s) 2489
TaaI ACNGT 7 cut(s) 293, 742, 1612, 2020, 2119, 2429, 2513
TaiI ACGT 1 cut(s) 168
TaqI TCGA 5 cut(s) 13, 324, 525, 556, 2221
TatI WGTACW 5 cut(s) 742, 989, 1388, 1607, 1810
TauI GCSGC 1 cut(s) 232
TscAI CASTG 7 cut(s) 845, 1423, 1792, 2023, 2350, 2468, 2518
TseFI GTSAC 3 cut(s) 1280, 1993, 2362
TseI GCWGC 2 cut(s) 48, 2339
Tsp45I GTSAC 3 cut(s) 1280, 1993, 2362
TspRI CASTG 7 cut(s) 845, 1423, 1792, 2023, 2350, 2468, 2518
Tth111I GACNNNGTC 1 cut(s) 1880
Van91I CCANNNNNTGG 1 cut(s) 671
Vha464I CTTAAG 1 cut(s) 548
VpaK11BI GGWCC 6 cut(s) 124, 190, 544, 1658, 1757, 1928
VspI ATTAAT 1 cut(s) 1425
XagI CCTNNNNNAGG 1 cut(s) 185
XapI RAATTY 3 cut(s) 394, 427, 1762
XceI RCATGY 2 cut(s) 646, 2478
XcmI CCANNNNNNNNNTGG 1 cut(s) 28
XmnI GAANNNNTTC 2 cut(s) 804, 1137
XspI CTAG 5 cut(s) 111, 647, 768, 1122, 1655
ZrmI AGTACT 1 cut(s) 1609
Zsp2I ATGCAT 1 cut(s) 1827
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.