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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G23740 AT4G14120 |
| fragaria_vesca | FvH4_4g12980 FvH4_4g12980 FvH4_4g12980 FvH4_4g12980 |
| malus_domestica | MD04G1019900.v1.1 |
| prunus_persica | Prupe.1G169400_v2.0.a1 |
| pyrus_communis | pycom04g01590 |
| rosa_chinensis | RchiOBHm_Chr4g0412661 |
| rosa_laevigata | RLG00000008269 |
| rosa_multiflora | Rmu_co8037358.1_g000001 Rmu_sc0001238.1_g000004 |
| rosa_roxburghii | Rroxscaffold_5G00356860 |
| rosa_rugosa | Rorug04G0115700 |
| rosa_samantha | Rh4AG174900 Rh4BG174300 Rh4CG185800 Rh4DG170800 |
| rosa_wichuraiana | Rw4G014660 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 71 |
| AccIII | TCCGGA | 1 cut(s) | 99 |
| AciI | CCGC | 3 cut(s) | 284, 779, 1766 |
| AclWI | GGATC | 5 cut(s) | 787, 1092, 1264, 1618, 1631 |
| AcsI | RAATTY | 2 cut(s) | 157, 1228 |
| AcuI | CTGAAG | 9 cut(s) | 35, 232, 390, 744, 995, 1035, 1575, 1761, 1890 |
| AfaI | GTAC | 5 cut(s) | 210, 457, 856, 1075, 1278 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 71, 329, 1391, 1900 |
| AgeI | ACCGGT | 1 cut(s) | 949 |
| AgsI | TTSAA | 7 cut(s) | 564, 736, 754, 969, 1070, 1672, 2013 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1958 |
| AjnI | CCWGG | 2 cut(s) | 627, 1168 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 335, 367 |
| AleI | CACNNNNGTG | 1 cut(s) | 1466 |
| AluBI | AGCT | 8 cut(s) | 109, 199, 410, 1005, 1120, 1370, 1751, 1805 |
| AluI | AGCT | 8 cut(s) | 109, 199, 410, 1005, 1120, 1370, 1751, 1805 |
| Alw26I | GTCTC | 1 cut(s) | 391 |
| AlwI | GGATC | 5 cut(s) | 787, 1092, 1264, 1618, 1631 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 310, 788, 1169 |
| Aor13HI | TCCGGA | 1 cut(s) | 99 |
| ApeKI | GCWGC | 1 cut(s) | 1811 |
| ApoI | RAATTY | 2 cut(s) | 157, 1228 |
| AseI | ATTAAT | 1 cut(s) | 891 |
| AsiGI | ACCGGT | 1 cut(s) | 949 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 270, 396 |
| AspS9I | GGNCC | 4 cut(s) | 1124, 1223, 1394, 1952 |
| AsuC2I | CCSGG | 1 cut(s) | 993 |
| AsuHPI | GGTGA | 4 cut(s) | 16, 273, 728, 1855 |
| AvaII | GGWCC | 4 cut(s) | 1124, 1223, 1394, 1952 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 480, 513, 1038, 1071 |
| BamHI | GGATCC | 1 cut(s) | 1623 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1359, 1391 |
| BauI | CACGAG | 1 cut(s) | 1641 |
| BbsI | GAAGAC | 1 cut(s) | 881 |
| BbvI | GCAGC | 1 cut(s) | 1798 |
| BccI | CCATC | 7 cut(s) | 323, 431, 1126, 1214, 1421, 1517, 1756 |
| BciT130I | CCWGG | 2 cut(s) | 629, 1170 |
| BciVI | GTATCC | 3 cut(s) | 481, 678, 1066 |
| BclI | TGATCA | 1 cut(s) | 301 |
| BcnI | CCSGG | 1 cut(s) | 993 |
| BcoDI | GTCTC | 1 cut(s) | 391 |
| BfaI | CTAG | 3 cut(s) | 47, 234, 1121 |
| BfmI | CTRYAG | 2 cut(s) | 165, 1930 |
| BfuI | GTATCC | 3 cut(s) | 481, 678, 1066 |
| BisI | GCNGC | 1 cut(s) | 1812 |
| BlsI | GCNGC | 1 cut(s) | 1813 |
| BmcAI | AGTACT | 1 cut(s) | 1075 |
| Bme1390I | CCNGG | 3 cut(s) | 629, 993, 1170 |
| Bme18I | GGWCC | 4 cut(s) | 1124, 1223, 1394, 1952 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1958 |
| BmgT120I | GGNCC | 4 cut(s) | 1124, 1223, 1394, 1952 |
| BmiI | GGNNCC | 2 cut(s) | 1395, 1625 |
| BmrFI | CCNGG | 3 cut(s) | 629, 993, 1170 |
| BmrI | ACTGGG | 1 cut(s) | 547 |
| BmsI | GCATC | 8 cut(s) | 709, 775, 1567, 1597, 1637, 1719, 1726, 1874 |
| BmuI | ACTGGG | 1 cut(s) | 547 |
| BpiI | GAAGAC | 1 cut(s) | 881 |
| BpuMI | CCSGG | 1 cut(s) | 993 |
| BsaBI | GATNNNNATC | 1 cut(s) | 583 |
| BsaJI | CCNNGG | 2 cut(s) | 992, 1955 |
| BsaWI | WCCGGW | 2 cut(s) | 99, 949 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1396, 1426 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 71, 329, 1391, 1900 |
| Bse118I | RCCGGY | 2 cut(s) | 949, 1534 |
| Bse1I | ACTGG | 5 cut(s) | 473, 553, 1059, 1332, 1457 |
| Bse8I | GATNNNNATC | 1 cut(s) | 583 |
| BseAI | TCCGGA | 1 cut(s) | 99 |
| BseBI | CCWGG | 2 cut(s) | 629, 1170 |
| BseDI | CCNNGG | 2 cut(s) | 992, 1955 |
| BseGI | GGATG | 5 cut(s) | 508, 577, 685, 1612, 1652 |
| BseJI | GATNNNNATC | 1 cut(s) | 583 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 71, 329, 1391, 1900 |
| BseMII | CTCAG | 6 cut(s) | 209, 402, 647, 780, 1130, 1613 |
| BseNI | ACTGG | 5 cut(s) | 473, 553, 1059, 1332, 1457 |
| BseXI | GCAGC | 1 cut(s) | 1798 |
| BsgI | GTGCAG | 2 cut(s) | 497, 1645 |
| BshTI | ACCGGT | 1 cut(s) | 949 |
| BsiSI | CCGG | 5 cut(s) | 100, 837, 950, 992, 1535 |
| BslFI | GGGAC | 1 cut(s) | 1374 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 71, 329, 1391, 1900 |
| BsmAI | GTCTC | 1 cut(s) | 391 |
| BsmFI | GGGAC | 1 cut(s) | 1374 |
| Bsp13I | TCCGGA | 1 cut(s) | 99 |
| Bsp1407I | TGTACA | 2 cut(s) | 208, 1276 |
| Bsp143I | GATC | 9 cut(s) | 301, 526, 792, 859, 916, 1084, 1256, 1623, 1915 |
| BspACI | CCGC | 3 cut(s) | 284, 779, 1766 |
| BspCNI | CTCAG | 6 cut(s) | 208, 401, 646, 781, 1129, 1612 |
| BspEI | TCCGGA | 1 cut(s) | 99 |
| BspHI | TCATGA | 1 cut(s) | 175 |
| BspLI | GGNNCC | 2 cut(s) | 1395, 1625 |
| BspMAI | CTGCAG | 1 cut(s) | 1934 |
| BspPI | GGATC | 5 cut(s) | 787, 1092, 1264, 1618, 1631 |
| BspQI | GCTCTTC | 1 cut(s) | 409 |
| BsrFI | RCCGGY | 2 cut(s) | 949, 1534 |
| BsrGI | TGTACA | 2 cut(s) | 208, 1276 |
| BsrI | ACTGG | 5 cut(s) | 473, 553, 1059, 1332, 1457 |
| BssAI | RCCGGY | 2 cut(s) | 949, 1534 |
| BssECI | CCNNGG | 2 cut(s) | 992, 1955 |
| BssMI | GATC | 9 cut(s) | 301, 526, 792, 859, 916, 1084, 1256, 1623, 1915 |
| BssSI | CACGAG | 1 cut(s) | 1641 |
| BssT1I | CCWWGG | 1 cut(s) | 1955 |
| Bst2BI | CACGAG | 1 cut(s) | 1641 |
| Bst2UI | CCWGG | 2 cut(s) | 629, 1170 |
| Bst4CI | ACNGT | 6 cut(s) | 208, 1078, 1486, 1585, 1895, 1979 |
| Bst6I | CTCTTC | 3 cut(s) | 409, 523, 720 |
| BstAUI | TGTACA | 2 cut(s) | 208, 1276 |
| BstC8I | GCNNGC | 3 cut(s) | 44, 1855, 1946 |
| BstDEI | CTNAG | 8 cut(s) | 195, 388, 588, 633, 789, 939, 1116, 1599 |
| BstF5I | GGATG | 5 cut(s) | 508, 577, 685, 1612, 1652 |
| BstKTI | GATC | 9 cut(s) | 304, 529, 795, 862, 919, 1087, 1259, 1626, 1918 |
| BstMAI | GTCTC | 1 cut(s) | 391 |
| BstMBI | GATC | 9 cut(s) | 301, 526, 792, 859, 916, 1084, 1256, 1623, 1915 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 728, 1703, 1811, 1871 |
| BstNI | CCWGG | 2 cut(s) | 629, 1170 |
| BstNSI | RCATGY | 2 cut(s) | 46, 1944 |
| BstSCI | CCNGG | 3 cut(s) | 627, 991, 1168 |
| BstSFI | CTRYAG | 2 cut(s) | 165, 1930 |
| BstV1I | GCAGC | 1 cut(s) | 1798 |
| BstV2I | GAAGAC | 1 cut(s) | 881 |
| BstX2I | RGATCY | 4 cut(s) | 792, 1084, 1256, 1623 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1552 |
| BstYI | RGATCY | 4 cut(s) | 792, 1084, 1256, 1623 |
| BsuI | GTATCC | 3 cut(s) | 481, 678, 1066 |
| BtsCI | GGATG | 5 cut(s) | 508, 577, 685, 1612, 1652 |
| BtsI | GCAGTG | 2 cut(s) | 889, 1927 |
| BtsIMutI | CAGTG | 7 cut(s) | 311, 480, 889, 1258, 1482, 1927, 1984 |
| Cac8I | GCNNGC | 3 cut(s) | 44, 1855, 1946 |
| CaiI | CAGNNNCTG | 3 cut(s) | 310, 788, 1169 |
| CciI | TCATGA | 1 cut(s) | 175 |
| Cfr10I | RCCGGY | 2 cut(s) | 949, 1534 |
| Cfr13I | GGNCC | 4 cut(s) | 1124, 1223, 1394, 1952 |
| CseI | GACGC | 1 cut(s) | 911 |
| Csp6I | GTAC | 5 cut(s) | 209, 456, 855, 1074, 1277 |
| CspAI | ACCGGT | 1 cut(s) | 949 |
| CviQI | GTAC | 5 cut(s) | 209, 456, 855, 1074, 1277 |
| DdeI | CTNAG | 8 cut(s) | 195, 388, 588, 633, 789, 939, 1116, 1599 |
| DpnI | GATC | 9 cut(s) | 303, 528, 794, 861, 918, 1086, 1258, 1625, 1917 |
| DpnII | GATC | 9 cut(s) | 301, 526, 792, 859, 916, 1084, 1256, 1623, 1915 |
| DraI | TTTAAA | 3 cut(s) | 957, 985, 1836 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1958 |
| Eam1104I | CTCTTC | 3 cut(s) | 409, 523, 720 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1958 |
| EarI | CTCTTC | 3 cut(s) | 409, 523, 720 |
| EciI | GGCGGA | 1 cut(s) | 1781 |
| Eco130I | CCWWGG | 1 cut(s) | 1955 |
| Eco32I | GATATC | 2 cut(s) | 22, 842 |
| Eco47I | GGWCC | 4 cut(s) | 1124, 1223, 1394, 1952 |
| Eco57I | CTGAAG | 9 cut(s) | 35, 232, 390, 744, 995, 1035, 1575, 1761, 1890 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1124, 1394 |
| EcoRII | CCWGG | 2 cut(s) | 627, 1168 |
| EcoRV | GATATC | 2 cut(s) | 22, 842 |
| EcoT14I | CCWWGG | 1 cut(s) | 1955 |
| EcoT22I | ATGCAT | 1 cut(s) | 1293 |
| ErhI | CCWWGG | 1 cut(s) | 1955 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1611, 1643 |
| FaqI | GGGAC | 1 cut(s) | 1374 |
| FbaI | TGATCA | 1 cut(s) | 301 |
| Fnu4HI | GCNGC | 1 cut(s) | 1812 |
| FokI | GGATG | 5 cut(s) | 515, 584, 672, 1619, 1659 |
| Fsp4HI | GCNGC | 1 cut(s) | 1812 |
| FspBI | CTAG | 3 cut(s) | 47, 234, 1121 |
| GluI | GCNGC | 1 cut(s) | 1812 |
| HapII | CCGG | 5 cut(s) | 100, 837, 950, 992, 1535 |
| HgaI | GACGC | 1 cut(s) | 911 |
| HincII | GTYRAC | 1 cut(s) | 1298 |
| HindII | GTYRAC | 1 cut(s) | 1298 |
| HindIII | AAGCTT | 1 cut(s) | 107 |
| HinfI | GANTC | 8 cut(s) | 419, 736, 761, 1108, 1409, 1656, 1689, 1935 |
| HpaII | CCGG | 5 cut(s) | 100, 837, 950, 992, 1535 |
| HphI | GGTGA | 4 cut(s) | 16, 273, 728, 1855 |
| Hpy166II | GTNNAC | 4 cut(s) | 456, 1298, 1316, 1325 |
| Hpy188III | TCNNGA | 8 cut(s) | 100, 125, 176, 263, 769, 1088, 1351, 1448 |
| Hpy8I | GTNNAC | 4 cut(s) | 456, 1298, 1316, 1325 |
| HpyAV | CCTTC | 5 cut(s) | 10, 80, 635, 1122, 1425 |
| HpyCH4III | ACNGT | 6 cut(s) | 208, 1078, 1486, 1585, 1895, 1979 |
| HpyCH4IV | ACGT | 1 cut(s) | 534 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 728, 1703, 1811, 1871 |
| HpyF3I | CTNAG | 8 cut(s) | 195, 388, 588, 633, 789, 939, 1116, 1599 |
| HpySE526I | ACGT | 1 cut(s) | 534 |
| Kpn2I | TCCGGA | 1 cut(s) | 99 |
| Ksp22I | TGATCA | 1 cut(s) | 301 |
| Kzo9I | GATC | 9 cut(s) | 301, 526, 792, 859, 916, 1084, 1256, 1623, 1915 |
| LguI | GCTCTTC | 1 cut(s) | 409 |
| Lsp1109I | GCAGC | 1 cut(s) | 1798 |
| LweI | GCATC | 8 cut(s) | 709, 775, 1567, 1597, 1637, 1719, 1726, 1874 |
| MaeI | CTAG | 3 cut(s) | 47, 234, 1121 |
| MaeII | ACGT | 1 cut(s) | 534 |
| MaeIII | GTNAC | 4 cut(s) | 746, 1459, 1594, 1828 |
| MalI | GATC | 9 cut(s) | 303, 528, 794, 861, 918, 1086, 1258, 1625, 1917 |
| MboI | GATC | 9 cut(s) | 301, 526, 792, 859, 916, 1084, 1256, 1623, 1915 |
| MfeI | CAATTG | 1 cut(s) | 1187 |
| MflI | RGATCY | 4 cut(s) | 792, 1084, 1256, 1623 |
| MlyI | GAGTC | 3 cut(s) | 1102, 1650, 1683 |
| MmeI | TCCRAC | 1 cut(s) | 706 |
| MnlI | CCTC | 9 cut(s) | 409, 526, 721, 1137, 1194, 1637, 1646, 1690, 1834 |
| Mph1103I | ATGCAT | 1 cut(s) | 1293 |
| MroI | TCCGGA | 1 cut(s) | 99 |
| MroXI | GAANNNNTTC | 2 cut(s) | 270, 396 |
| MslI | CAYNNNNRTG | 4 cut(s) | 699, 1349, 1466, 1645 |
| MspA1I | CMGCKG | 2 cut(s) | 199, 1805 |
| MspI | CCGG | 5 cut(s) | 100, 837, 950, 992, 1535 |
| MspR9I | CCNGG | 3 cut(s) | 629, 993, 1170 |
| MunI | CAATTG | 1 cut(s) | 1187 |
| MvaI | CCWGG | 2 cut(s) | 629, 1170 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 728, 1703, 1811, 1871 |
| NciI | CCSGG | 1 cut(s) | 993 |
| NdeII | GATC | 9 cut(s) | 301, 526, 792, 859, 916, 1084, 1256, 1623, 1915 |
| NlaIV | GGNNCC | 2 cut(s) | 1395, 1625 |
| NmuCI | GTSAC | 3 cut(s) | 746, 1459, 1828 |
| NsiI | ATGCAT | 1 cut(s) | 1293 |
| NspI | RCATGY | 2 cut(s) | 46, 1944 |
| OliI | CACNNNNGTG | 1 cut(s) | 1466 |
| PaeI | GCATGC | 1 cut(s) | 46 |
| PagI | TCATGA | 1 cut(s) | 175 |
| PciSI | GCTCTTC | 1 cut(s) | 409 |
| PdmI | GAANNNNTTC | 2 cut(s) | 270, 396 |
| PfeI | GAWTC | 5 cut(s) | 419, 736, 761, 1409, 1935 |
| PflFI | GACNNNGTC | 1 cut(s) | 1346 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 71 |
| PinAI | ACCGGT | 1 cut(s) | 949 |
| PkrI | GCNGC | 1 cut(s) | 1813 |
| PleI | GAGTC | 3 cut(s) | 1102, 1650, 1683 |
| PpsI | GAGTC | 3 cut(s) | 1102, 1650, 1683 |
| PpuMI | RGGWCCY | 2 cut(s) | 1124, 1394 |
| PshBI | ATTAAT | 1 cut(s) | 891 |
| Psp5II | RGGWCCY | 2 cut(s) | 1124, 1394 |
| Psp6I | CCWGG | 2 cut(s) | 627, 1168 |
| PspGI | CCWGG | 2 cut(s) | 627, 1168 |
| PspN4I | GGNNCC | 2 cut(s) | 1395, 1625 |
| PspPI | GGNCC | 4 cut(s) | 1124, 1223, 1394, 1952 |
| PspPPI | RGGWCCY | 2 cut(s) | 1124, 1394 |
| PstI | CTGCAG | 1 cut(s) | 1934 |
| PstNI | CAGNNNCTG | 3 cut(s) | 310, 788, 1169 |
| PsuI | RGATCY | 4 cut(s) | 792, 1084, 1256, 1623 |
| PsyI | GACNNNGTC | 1 cut(s) | 1346 |
| PvuII | CAGCTG | 2 cut(s) | 199, 1805 |
| RsaI | GTAC | 5 cut(s) | 210, 457, 856, 1075, 1278 |
| RsaNI | GTAC | 5 cut(s) | 209, 456, 855, 1074, 1277 |
| RseI | CAYNNNNRTG | 4 cut(s) | 699, 1349, 1466, 1645 |
| SapI | GCTCTTC | 1 cut(s) | 409 |
| SatI | GCNGC | 1 cut(s) | 1812 |
| Sau3AI | GATC | 9 cut(s) | 301, 526, 792, 859, 916, 1084, 1256, 1623, 1915 |
| Sau96I | GGNCC | 4 cut(s) | 1124, 1223, 1394, 1952 |
| ScaI | AGTACT | 1 cut(s) | 1075 |
| SchI | GAGTC | 3 cut(s) | 1102, 1650, 1683 |
| ScrFI | CCNGG | 3 cut(s) | 629, 993, 1170 |
| SfaNI | GCATC | 8 cut(s) | 709, 775, 1567, 1597, 1637, 1719, 1726, 1874 |
| SfcI | CTRYAG | 2 cut(s) | 165, 1930 |
| SinI | GGWCC | 4 cut(s) | 1124, 1223, 1394, 1952 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 699, 1349, 1466, 1645 |
| SphI | GCATGC | 1 cut(s) | 46 |
| SsiI | CCGC | 3 cut(s) | 284, 779, 1766 |
| SspMI | CTAG | 3 cut(s) | 47, 234, 1121 |
| StyD4I | CCNGG | 3 cut(s) | 627, 991, 1168 |
| StyI | CCWWGG | 1 cut(s) | 1955 |
| TaaI | ACNGT | 6 cut(s) | 208, 1078, 1486, 1585, 1895, 1979 |
| TaiI | ACGT | 1 cut(s) | 537 |
| TaqI | TCGA | 1 cut(s) | 1687 |
| TatI | WGTACW | 5 cut(s) | 208, 455, 854, 1073, 1276 |
| TfiI | GAWTC | 5 cut(s) | 419, 736, 761, 1409, 1935 |
| TscAI | CASTG | 7 cut(s) | 311, 480, 889, 1258, 1489, 1934, 1984 |
| TseFI | GTSAC | 3 cut(s) | 746, 1459, 1828 |
| TseI | GCWGC | 1 cut(s) | 1811 |
| Tsp45I | GTSAC | 3 cut(s) | 746, 1459, 1828 |
| TspRI | CASTG | 7 cut(s) | 311, 480, 889, 1258, 1489, 1934, 1984 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1346 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 71 |
| VpaK11BI | GGWCC | 4 cut(s) | 1124, 1223, 1394, 1952 |
| VspI | ATTAAT | 1 cut(s) | 891 |
| XapI | RAATTY | 2 cut(s) | 157, 1228 |
| XceI | RCATGY | 2 cut(s) | 46, 1944 |
| XmnI | GAANNNNTTC | 2 cut(s) | 270, 396 |
| XspI | CTAG | 3 cut(s) | 47, 234, 1121 |
| ZrmI | AGTACT | 1 cut(s) | 1075 |
| Zsp2I | ATGCAT | 1 cut(s) | 1293 |