endonuclease activity
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G35658 AT2G35658 AT2G35658 AT4G16840 |
| fragaria_vesca | FvH4_5g20070 FvH4_5g20070 |
| malus_domestica | MD04G1050500.v1.1 MD06G1049300.v1.1 |
| prunus_persica | Prupe.5G059800_v2.0.a1 |
| pyrus_communis | pycom04g04440 |
| rosa_chinensis | RchiOBHm_Chr7g0204931 |
| rosa_multiflora | Rmu_sc0004124.1_g000005 |
| rosa_roxburghii | Rroxscaffold_3G00252660 |
| rosa_rugosa | Rorug07G0086600 Rorug07G0086600 |
| rosa_samantha | Rh7AG217300 Rh7BG214200 Rh7CG230600 Rh7DG224900 |
| rosa_wichuraiana | Rw7G018850 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 192 |
| AclWI | GGATC | 2 cut(s) | 3, 140 |
| AcyI | GRCGYC | 1 cut(s) | 178 |
| AgsI | TTSAA | 2 cut(s) | 75, 82 |
| Alw26I | GTCTC | 1 cut(s) | 34 |
| AlwI | GGATC | 2 cut(s) | 3, 140 |
| AoxI | GGCC | 1 cut(s) | 51 |
| AspLEI | GCGC | 1 cut(s) | 239 |
| AspS9I | GGNCC | 1 cut(s) | 189 |
| AsuHPI | GGTGA | 1 cut(s) | 101 |
| AvaII | GGWCC | 1 cut(s) | 189 |
| BccI | CCATC | 1 cut(s) | 212 |
| BceAI | ACGGC | 2 cut(s) | 115, 191 |
| BcoDI | GTCTC | 1 cut(s) | 34 |
| Bme18I | GGWCC | 1 cut(s) | 189 |
| BmgT120I | GGNCC | 1 cut(s) | 189 |
| BmsI | GCATC | 1 cut(s) | 139 |
| BsaHI | GRCGYC | 1 cut(s) | 178 |
| BseGI | GGATG | 1 cut(s) | 204 |
| BseMII | CTCAG | 1 cut(s) | 117 |
| BseRI | GAGGAG | 2 cut(s) | 46, 49 |
| BshFI | GGCC | 1 cut(s) | 53 |
| BsmAI | GTCTC | 1 cut(s) | 34 |
| BsnI | GGCC | 1 cut(s) | 53 |
| Bsp143I | GATC | 3 cut(s) | 8, 106, 145 |
| BspACI | CCGC | 1 cut(s) | 192 |
| BspANI | GGCC | 1 cut(s) | 53 |
| BspCNI | CTCAG | 1 cut(s) | 116 |
| BspPI | GGATC | 2 cut(s) | 3, 140 |
| BssMI | GATC | 3 cut(s) | 8, 106, 145 |
| BssNI | GRCGYC | 1 cut(s) | 178 |
| BstACI | GRCGYC | 1 cut(s) | 178 |
| BstDEI | CTNAG | 1 cut(s) | 103 |
| BstF5I | GGATG | 1 cut(s) | 204 |
| BstHHI | GCGC | 1 cut(s) | 239 |
| BstKTI | GATC | 3 cut(s) | 11, 109, 148 |
| BstMAI | GTCTC | 1 cut(s) | 34 |
| BstMBI | GATC | 3 cut(s) | 8, 106, 145 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 200 |
| BstX2I | RGATCY | 1 cut(s) | 8 |
| BstYI | RGATCY | 1 cut(s) | 8 |
| BsuRI | GGCC | 1 cut(s) | 53 |
| BtsCI | GGATG | 1 cut(s) | 204 |
| CfoI | GCGC | 1 cut(s) | 239 |
| Cfr13I | GGNCC | 1 cut(s) | 189 |
| CseI | GACGC | 1 cut(s) | 167 |
| CviAII | CATG | 1 cut(s) | 158 |
| CviJI | RGCY | 2 cut(s) | 53, 102 |
| CviKI_1 | RGCY | 2 cut(s) | 53, 102 |
| DdeI | CTNAG | 1 cut(s) | 103 |
| DpnI | GATC | 3 cut(s) | 10, 108, 147 |
| DpnII | GATC | 3 cut(s) | 8, 106, 145 |
| Eco47I | GGWCC | 1 cut(s) | 189 |
| FaeI | CATG | 1 cut(s) | 161 |
| FaiI | YATR | 1 cut(s) | 159 |
| FatI | CATG | 1 cut(s) | 157 |
| FokI | GGATG | 1 cut(s) | 191 |
| GlaI | GCGC | 1 cut(s) | 238 |
| HaeIII | GGCC | 1 cut(s) | 53 |
| HgaI | GACGC | 1 cut(s) | 167 |
| HhaI | GCGC | 1 cut(s) | 239 |
| Hin1I | GRCGYC | 1 cut(s) | 178 |
| Hin1II | CATG | 1 cut(s) | 161 |
| Hin6I | GCGC | 1 cut(s) | 237 |
| HinP1I | GCGC | 1 cut(s) | 237 |
| HinfI | GANTC | 1 cut(s) | 27 |
| HphI | GGTGA | 1 cut(s) | 101 |
| Hpy188I | TCNGA | 1 cut(s) | 106 |
| Hpy188III | TCNNGA | 2 cut(s) | 24, 266 |
| Hpy99I | CGWCG | 1 cut(s) | 183 |
| HpyAV | CCTTC | 1 cut(s) | 88 |
| HpyCH4V | TGCA | 2 cut(s) | 4, 130 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 200 |
| HpyF3I | CTNAG | 1 cut(s) | 103 |
| Hsp92I | GRCGYC | 1 cut(s) | 178 |
| Hsp92II | CATG | 1 cut(s) | 161 |
| HspAI | GCGC | 1 cut(s) | 237 |
| Kzo9I | GATC | 3 cut(s) | 8, 106, 145 |
| LpnPI | CCDG | 8 cut(s) | 35, 37, 48, 128, 172, 231, 235, 236 |
| LweI | GCATC | 1 cut(s) | 139 |
| MalI | GATC | 3 cut(s) | 10, 108, 147 |
| MboI | GATC | 3 cut(s) | 8, 106, 145 |
| MboII | GAAGA | 1 cut(s) | 63 |
| MflI | RGATCY | 1 cut(s) | 8 |
| MlyI | GAGTC | 1 cut(s) | 36 |
| MnlI | CCTC | 7 cut(s) | 31, 64, 67, 70, 161, 242, 257 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 200 |
| NdeII | GATC | 3 cut(s) | 8, 106, 145 |
| NlaIII | CATG | 1 cut(s) | 161 |
| PleI | GAGTC | 1 cut(s) | 35 |
| PpsI | GAGTC | 1 cut(s) | 35 |
| PspPI | GGNCC | 1 cut(s) | 189 |
| PsuI | RGATCY | 1 cut(s) | 8 |
| Sau3AI | GATC | 3 cut(s) | 8, 106, 145 |
| Sau96I | GGNCC | 1 cut(s) | 189 |
| SchI | GAGTC | 1 cut(s) | 36 |
| SetI | ASST | 4 cut(s) | 80, 143, 191, 220 |
| SfaNI | GCATC | 1 cut(s) | 139 |
| SinI | GGWCC | 1 cut(s) | 189 |
| SsiI | CCGC | 1 cut(s) | 192 |
| VpaK11BI | GGWCC | 1 cut(s) | 189 |