MD04G1056000.v1.1

nucleobase-ascorbate transporter

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
OG0011640
Physical Location & Seq
Forward (+)
6845238 .. 6848712
3475 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1056000.v1.1.491

Sequence Viewer

Length: 1689 bp
ATGGCTCAAGGCTGTTGTGGCGGTGGTAACAATAACAACGGAGGTAGTAATGGTGGTGGTGGAAATGGTAGTGGGAATGGTGGGAGTGGTGGTTGCAATGGTGGAAATGGTGGTGGCAACAACAACAACAAAACCGAGGAGTTACAACCACACCCACTGAAAGAGCAATTACCAGGCGTCCAGTATTGTGTTAACAGCCCGCCACCATGGCCTGAAGCAATCATGCTGGGTTTCCAGCACTACCTATTGACTCTTGGGATTACTGTCCTAATTCCAAGTATGCTTGTCCCCAAAATGGGTGGAGGAAATATTGAGAAGGCTAGGGTGATACAAACCATGCTCTTTGTTTCGGGGTTCAACACGCTCTTCCAGTCTCTATTTGGAACCCGACTTCCTACTGTGGTAACGGCTTCATATACATATGTAATCCCCACAACATCCATACTCCTAGCCAGTAGATACAAGGATTATTCAGATCCTCATGAGAAGTTTTTGGACACTATGAGAGGTATACAAGGTGCCTTAATCATTACCGCCAGTTTCCAGATGATCATCGGCTTCCTAGGCTTGTGGAGAAATGCAATAAGGTGCCTTAGCCCTCTTTCTGTTGTCCCATACATAACTTTTACTGGACTAGGAGTTTATCGTCTCGGTTTCCCTACGTTGGCCAGATGTGTTGAACTCGGGGTTCCAGAGTTGATCGTCATGGTTTTCATTGCACAGTATCTTCCTCATATTTTAAATACCAAGAAGAAAATATGCGACAGATTTGCAGTGTTGTTCTCCATCCCAATTGTATGGTTGTTTGCACAACTTCTAACCTCAAGTGGTGCATATAATAACAAACCTACAACAACTCAACTGAGTTGCCGCACTGATCGTTCTGGCCTTGTTGGTGCAGCTCCCTGGATATACATTCCATATCCATTTCAATGGGGAAGCCCTACTTTTAATGTAGGAGAAGCTCTTGCAATGATTGCTGCTTCTTTCGTTTCAACCTTTGAGTCGACTGGTACATTTTTCACTACAGCAAGATACGGGAGTGCCACACCTGTACCACCTTCTGTTGTTAGCCGTGGAGTTGGCTGGTTGGGTATAGGAGTTCTATTTGACGGGATGTTTGGTTCCCTAACTGGTTCTGCAGCATCAGTTGAGAATGCTGGCCTATTAGCATTGACAAAAGTTGGAAGCCGTAGAGTCATCCAAATTTCAGCTGGCTTCATGATTTTCTTCTCAGTATTTGGAAAATTTGGAGCCCTATTTGCTTCTATTCCAACACCAATCATAGCAGCTATTTACTGCGTCTTATATGGCTATGTCTCTGCTGCAGGGCTTGGCTTTCTTCAGTTTTGTAACCTGAACAGTTTTAGAACAAAATTTATACTGGGGTTCTCTTTCTTCTTGGGGATTTCTATCCCACAATACTTCAGAGAATATTATCACAAAGGCGCCGAAAGCAGTTCTGGATGGTTCGACGATTTAGTTACTGTGATCTTCATGTCTCACACGACGGTAGCTGCAATTGTAGCAATGGTCTTGGATTGTTCACTGGCCCGGGAAGACAATGCATCTCGAAAAGACAGTGGTTTGTACTGGTGGGAGAAGTTTAGCTTGTATGGTTCAGATATTAGGAATGACGAGTTCTATGCATTACCATGCAGATTGAACAAGTTTTTCCCGGCCCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Xan_ur_permease

Protein Analysis

563

Amino Acids

60.78

Weight (kDa)

8.89

Isoelectric Point (pI)

33.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Xan_ur_permease PF00860 73 - 476 4.3e-59 Permease family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011640)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G65550 AT5G25420
fragaria_vesca FvH4_2g32910
malus_domestica MD04G1056000.v1.1 MD15G1067600.v1.1
prunus_persica Prupe.1G421500_v2.0.a1
pyrus_communis pycom04g04930
rosa_chinensis RchiOBHm_Chr6g0309811
rosa_laevigata RLG00000010534
rosa_multiflora Rmu_co8452475.1_g000001 Rmu_sc0011006.1_g000001 Rmu_ssc0000373.1_g000005
rosa_roxburghii Rroxscaffold_7G00159160
rosa_rugosa Rorug06G0375000
rosa_samantha Rh6AG488300 Rh6BG497900 Rh6CG502700 Rh6DG488800
rosa_wichuraiana Rw6G042530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 518, 588, 1448
AccI GTMKAC 2 cut(s) 511, 1007
AciI CCGC 4 cut(s) 21, 200, 534, 871
AclWI GGATC 1 cut(s) 470
AcoI YGGCCR 1 cut(s) 666
AcsI RAATTY 3 cut(s) 1206, 1247, 1376
AcuI CTGAAG 3 cut(s) 234, 1328, 1411
AcyI GRCGYC 2 cut(s) 177, 1449
AfaI GTAC 3 cut(s) 1015, 1056, 1592
AfiI CCNNNNNNNGG 3 cut(s) 295, 296, 664
AgsI TTSAA 5 cut(s) 358, 680, 932, 996, 1666
AjnI CCWGG 2 cut(s) 172, 905
AloI GAACNNNNNNTCC 4 cut(s) 376, 408, 1108, 1140
AluBI AGCT 6 cut(s) 902, 965, 1214, 1292, 1517, 1611
AluI AGCT 6 cut(s) 902, 965, 1214, 1292, 1517, 1611
Alw26I GTCTC 4 cut(s) 378, 653, 1324, 1506
AlwI GGATC 1 cut(s) 470
Ama87I CYCGRG 2 cut(s) 683, 1554
AoxI GGCC 6 cut(s) 209, 666, 886, 1162, 1551, 1680
ApeKI GCWGC 6 cut(s) 899, 980, 1142, 1289, 1325, 1517
ApoI RAATTY 3 cut(s) 1206, 1247, 1376
ArsI GACNNNNNNTTYG 2 cut(s) 1103, 1135
AspA2I CCTAGG 1 cut(s) 562
AspLEI GCGC 1 cut(s) 1451
AspS9I GGNCC 2 cut(s) 1552, 1681
AsuC2I CCSGG 3 cut(s) 1555, 1556, 1679
AsuHPI GGTGA 1 cut(s) 337
AvaI CYCGRG 2 cut(s) 683, 1554
AvrII CCTAGG 1 cut(s) 562
BaeI ACNNNNGTAYC 4 cut(s) 1027, 1038, 1060, 1071
BalI TGGCCA 1 cut(s) 668
BanI GGYRCC 3 cut(s) 518, 588, 1448
BanII GRGCYC 1 cut(s) 1258
BbsI GAAGAC 1 cut(s) 1566
BbvI GCAGC 6 cut(s) 911, 967, 1154, 1301, 1312, 1504
BccI CCATC 2 cut(s) 794, 1461
BceAI ACGGC 3 cut(s) 423, 1059, 1176
BcgI CGANNNNNNTGC 4 cut(s) 752, 786, 1628, 1662
BciT130I CCWGG 2 cut(s) 174, 907
BclI TGATCA 1 cut(s) 549
BcnI CCSGG 3 cut(s) 1555, 1556, 1679
BcoDI GTCTC 4 cut(s) 378, 653, 1324, 1506
BfaI CTAG 4 cut(s) 321, 449, 563, 635
BfmI CTRYAG 3 cut(s) 1026, 1140, 1326
BfoI RGCGCY 1 cut(s) 1452
BglI GCCNNNNNGGC 1 cut(s) 208
BisI GCNGC 7 cut(s) 871, 900, 981, 1143, 1290, 1326, 1518
BlnI CCTAGG 1 cut(s) 562
BlsI GCNGC 7 cut(s) 872, 901, 982, 1144, 1291, 1327, 1519
Bme1390I CCNGG 5 cut(s) 174, 907, 1555, 1556, 1679
BmeT110I CYCGRG 2 cut(s) 683, 1554
BmgT120I GGNCC 2 cut(s) 1552, 1681
BmiI GGNNCC 7 cut(s) 385, 520, 590, 690, 1126, 1255, 1450
BmrFI CCNGG 5 cut(s) 174, 907, 1555, 1556, 1679
BmrI ACTGGG 1 cut(s) 1394
BmsI GCATC 2 cut(s) 1154, 1577
BmuI ACTGGG 1 cut(s) 1394
BpiI GAAGAC 1 cut(s) 1566
Bpu10I CCTNAGC 1 cut(s) 593
BpuEI CTTGAG 1 cut(s) 808
BpuMI CCSGG 3 cut(s) 1555, 1556, 1679
BsaBI GATNNNNATC 2 cut(s) 551, 1412
BsaHI GRCGYC 2 cut(s) 177, 1449
BsaJI CCNNGG 6 cut(s) 135, 206, 562, 905, 1075, 1554
BsaXI ACNNNNNCTCC 2 cut(s) 76, 106
Bsc4I CCNNNNNNNGG 3 cut(s) 295, 296, 664
Bse3DI GCAATG 4 cut(s) 103, 714, 978, 1536
Bse8I GATNNNNATC 2 cut(s) 551, 1412
BseBI CCWGG 2 cut(s) 174, 907
BseDI CCNNGG 6 cut(s) 135, 206, 562, 905, 1075, 1554
BseGI GGATG 5 cut(s) 437, 786, 1122, 1200, 1472
BseJI GATNNNNATC 2 cut(s) 551, 1412
BseLI CCNNNNNNNGG 3 cut(s) 295, 296, 664
BseMI GCAATG 4 cut(s) 103, 714, 978, 1536
BseMII CTCAG 2 cut(s) 854, 1248
BseRI GAGGAG 1 cut(s) 152
BseXI GCAGC 6 cut(s) 911, 967, 1154, 1301, 1312, 1504
BseYI CCCAGC 1 cut(s) 226
BsgI GTGCAG 1 cut(s) 918
BshFI GGCC 6 cut(s) 211, 668, 888, 1164, 1553, 1682
BshNI GGYRCC 3 cut(s) 518, 588, 1448
BsiHKCI CYCGRG 2 cut(s) 683, 1554
BsiSI CCGG 2 cut(s) 1555, 1679
BslFI GGGAC 2 cut(s) 272, 596
BslI CCNNNNNNNGG 3 cut(s) 295, 296, 664
BsmAI GTCTC 4 cut(s) 378, 653, 1324, 1506
BsmBI CGTCTC 1 cut(s) 653
BsmFI GGGAC 2 cut(s) 272, 596
BsmI GAATGC 1 cut(s) 1162
BsnI GGCC 6 cut(s) 211, 668, 888, 1164, 1553, 1682
BsoBI CYCGRG 2 cut(s) 683, 1554
Bsp1286I GDGCHC 1 cut(s) 1258
Bsp143I GATC 5 cut(s) 475, 549, 699, 877, 1491
Bsp19I CCATGG 1 cut(s) 206
BspACI CCGC 4 cut(s) 21, 200, 534, 871
BspANI GGCC 6 cut(s) 211, 668, 888, 1164, 1553, 1682
BspCNI CTCAG 2 cut(s) 855, 1247
BspHI TCATGA 2 cut(s) 481, 1221
BspLI GGNNCC 7 cut(s) 385, 520, 590, 690, 1126, 1255, 1450
BspMAI CTGCAG 2 cut(s) 1144, 1330
BspPI GGATC 1 cut(s) 470
BspQI GCTCTTC 1 cut(s) 371
BspT107I GGYRCC 3 cut(s) 518, 588, 1448
BsrDI GCAATG 4 cut(s) 103, 714, 978, 1536
BssECI CCNNGG 6 cut(s) 135, 206, 562, 905, 1075, 1554
BssMI GATC 5 cut(s) 475, 549, 699, 877, 1491
BssNAI GTATAC 1 cut(s) 512
BssNI GRCGYC 2 cut(s) 177, 1449
BssT1I CCWWGG 2 cut(s) 206, 562
Bst1107I GTATAC 1 cut(s) 512
Bst2UI CCWGG 2 cut(s) 174, 907
Bst4CI ACNGT 7 cut(s) 265, 400, 723, 1364, 1489, 1513, 1583
Bst6I CTCTTC 1 cut(s) 371
BstACI GRCGYC 2 cut(s) 177, 1449
BstAPI GCANNNNNTGC 1 cut(s) 977
BstC8I GCNNGC 3 cut(s) 200, 1162, 1216
BstDEI CTNAG 3 cut(s) 593, 863, 1234
BstDSI CCRYGG 2 cut(s) 206, 1075
BstF5I GGATG 5 cut(s) 437, 786, 1122, 1200, 1472
BstH2I RGCGCY 1 cut(s) 1452
BstHHI GCGC 1 cut(s) 1451
BstKTI GATC 5 cut(s) 478, 552, 702, 880, 1494
BstMAI GTCTC 4 cut(s) 378, 653, 1324, 1506
BstMBI GATC 5 cut(s) 475, 549, 699, 877, 1491
BstMWI GCNNNNNNNGC 7 cut(s) 18, 208, 564, 977, 1262, 1455, 1526
BstNI CCWGG 2 cut(s) 174, 907
BstSCI CCNGG 5 cut(s) 172, 905, 1553, 1554, 1677
BstSFI CTRYAG 3 cut(s) 1026, 1140, 1326
BstV1I GCAGC 6 cut(s) 911, 967, 1154, 1301, 1312, 1504
BstV2I GAAGAC 1 cut(s) 1566
BstX2I RGATCY 1 cut(s) 475
BstXI CCANNNNNNTGG 2 cut(s) 798, 933
BstYI RGATCY 1 cut(s) 475
BstZ17I GTATAC 1 cut(s) 512
BsuRI GGCC 6 cut(s) 211, 668, 888, 1164, 1553, 1682
BtgI CCRYGG 2 cut(s) 206, 1075
BtsCI GGATG 5 cut(s) 437, 786, 1122, 1200, 1472
BtsI GCAGTG 1 cut(s) 780
BtsIMutI CAGTG 5 cut(s) 155, 780, 873, 1547, 1588
Cac8I GCNNGC 3 cut(s) 200, 1162, 1216
CciI TCATGA 2 cut(s) 481, 1221
CfoI GCGC 1 cut(s) 1451
Cfr13I GGNCC 2 cut(s) 1552, 1681
Cfr9I CCCGGG 1 cut(s) 1554
CseI GACGC 2 cut(s) 166, 1291
Csp6I GTAC 3 cut(s) 1014, 1055, 1591
CspCI CAANNNNNGTGG 2 cut(s) 280, 315
CviAII CATG 8 cut(s) 207, 223, 337, 482, 706, 1222, 1498, 1656
CviQI GTAC 3 cut(s) 1014, 1055, 1591
DdeI CTNAG 3 cut(s) 593, 863, 1234
DinI GGCGCC 1 cut(s) 1450
DpnI GATC 5 cut(s) 477, 551, 701, 879, 1493
DpnII GATC 5 cut(s) 475, 549, 699, 877, 1491
DraI TTTAAA 1 cut(s) 741
EaeI YGGCCR 1 cut(s) 666
Eam1104I CTCTTC 1 cut(s) 371
EarI CTCTTC 1 cut(s) 371
Eco130I CCWWGG 2 cut(s) 206, 562
Eco24I GRGCYC 1 cut(s) 1258
Eco57I CTGAAG 3 cut(s) 234, 1328, 1411
Eco88I CYCGRG 2 cut(s) 683, 1554
EcoRII CCWGG 2 cut(s) 172, 905
EcoT14I CCWWGG 2 cut(s) 206, 562
EcoT22I ATGCAT 2 cut(s) 1570, 1651
EcoT38I GRGCYC 1 cut(s) 1258
EgeI GGCGCC 1 cut(s) 1450
EheI GGCGCC 1 cut(s) 1450
ErhI CCWWGG 2 cut(s) 206, 562
Esp3I CGTCTC 1 cut(s) 653
FaeI CATG 8 cut(s) 210, 226, 340, 485, 709, 1225, 1501, 1659
FalI AAGNNNNNCTT 4 cut(s) 931, 963, 1595, 1627
FaqI GGGAC 2 cut(s) 272, 596
FatI CATG 8 cut(s) 206, 222, 336, 481, 705, 1221, 1497, 1655
FauI CCCGC 1 cut(s) 207
FauNDI CATATG 1 cut(s) 421
FbaI TGATCA 1 cut(s) 549
FblI GTMKAC 2 cut(s) 511, 1007
Fnu4HI GCNGC 7 cut(s) 871, 900, 981, 1143, 1290, 1326, 1518
FokI GGATG 5 cut(s) 424, 773, 1129, 1187, 1479
FriOI GRGCYC 1 cut(s) 1258
Fsp4HI GCNGC 7 cut(s) 871, 900, 981, 1143, 1290, 1326, 1518
FspBI CTAG 4 cut(s) 321, 449, 563, 635
GlaI GCGC 1 cut(s) 1450
GluI GCNGC 7 cut(s) 871, 900, 981, 1143, 1290, 1326, 1518
GsaI CCCAGC 1 cut(s) 230
HaeII RGCGCY 1 cut(s) 1452
HaeIII GGCC 6 cut(s) 211, 668, 888, 1164, 1553, 1682
HapII CCGG 2 cut(s) 1555, 1679
HgaI GACGC 2 cut(s) 166, 1291
HhaI GCGC 1 cut(s) 1451
Hin1I GRCGYC 2 cut(s) 177, 1449
Hin1II CATG 8 cut(s) 210, 226, 340, 485, 709, 1225, 1501, 1659
Hin6I GCGC 1 cut(s) 1449
HinP1I GCGC 1 cut(s) 1449
HincII GTYRAC 2 cut(s) 193, 1008
HindII GTYRAC 2 cut(s) 193, 1008
HinfI GANTC 3 cut(s) 250, 1004, 1197
HpaI GTTAAC 1 cut(s) 193
HpaII CCGG 2 cut(s) 1555, 1679
HphI GGTGA 1 cut(s) 337
Hpy166II GTNNAC 4 cut(s) 193, 512, 1008, 1547
Hpy188I TCNGA 3 cut(s) 475, 1430, 1624
Hpy188III TCNNGA 6 cut(s) 482, 544, 692, 1222, 1464, 1572
Hpy8I GTNNAC 4 cut(s) 193, 512, 1008, 1547
Hpy99I CGWCG 2 cut(s) 1478, 1513
HpyAV CCTTC 2 cut(s) 310, 1071
HpyCH4III ACNGT 7 cut(s) 265, 400, 723, 1364, 1489, 1513, 1583
HpyCH4IV ACGT 1 cut(s) 662
HpyF10VI GCNNNNNNNGC 7 cut(s) 18, 208, 564, 977, 1262, 1455, 1526
HpyF3I CTNAG 3 cut(s) 593, 863, 1234
HpySE526I ACGT 1 cut(s) 662
Hsp92I GRCGYC 2 cut(s) 177, 1449
Hsp92II CATG 8 cut(s) 210, 226, 340, 485, 709, 1225, 1501, 1659
HspAI GCGC 1 cut(s) 1449
KasI GGCGCC 1 cut(s) 1448
Ksp22I TGATCA 1 cut(s) 549
KspAI GTTAAC 1 cut(s) 193
Kzo9I GATC 5 cut(s) 475, 549, 699, 877, 1491
LguI GCTCTTC 1 cut(s) 371
LmnI GCTCC 2 cut(s) 907, 1253
Lsp1109I GCAGC 6 cut(s) 911, 967, 1154, 1301, 1312, 1504
LweI GCATC 2 cut(s) 1154, 1577
MaeI CTAG 4 cut(s) 321, 449, 563, 635
MaeII ACGT 1 cut(s) 662
MaeIII GTNAC 5 cut(s) 26, 141, 403, 1352, 1483
MalI GATC 5 cut(s) 477, 551, 701, 879, 1493
MboI GATC 5 cut(s) 475, 549, 699, 877, 1491
MboII GAAGA 8 cut(s) 358, 719, 763, 1222, 1334, 1390, 1486, 1571
MfeI CAATTG 2 cut(s) 792, 1521
MflI RGATCY 1 cut(s) 475
MhlI GDGCHC 1 cut(s) 1258
MlsI TGGCCA 1 cut(s) 668
MluCI AATT 7 cut(s) 167, 270, 792, 1206, 1247, 1376, 1521
MluNI TGGCCA 1 cut(s) 668
Mly113I GGCGCC 1 cut(s) 1449
MlyI GAGTC 3 cut(s) 244, 1013, 1206
MmeI TCCRAC 2 cut(s) 1165, 1298
MnlI CCTC 8 cut(s) 35, 130, 296, 489, 500, 609, 741, 832
Mox20I TGGCCA 1 cut(s) 668
Mph1103I ATGCAT 2 cut(s) 1570, 1651
MscI TGGCCA 1 cut(s) 668
MseI TTAA 4 cut(s) 192, 524, 740, 951
MslI CAYNNNNRTG 2 cut(s) 931, 1654
Msp20I TGGCCA 1 cut(s) 668
MspA1I CMGCKG 1 cut(s) 1214
MspI CCGG 2 cut(s) 1555, 1679
MspR9I CCNGG 5 cut(s) 174, 907, 1555, 1556, 1679
MunI CAATTG 2 cut(s) 792, 1521
Mva1269I GAATGC 1 cut(s) 1162
MvaI CCWGG 2 cut(s) 174, 907
MwoI GCNNNNNNNGC 7 cut(s) 18, 208, 564, 977, 1262, 1455, 1526
NarI GGCGCC 1 cut(s) 1449
NciI CCSGG 3 cut(s) 1555, 1556, 1679
NcoI CCATGG 1 cut(s) 206
NdeI CATATG 1 cut(s) 421
NdeII GATC 5 cut(s) 475, 549, 699, 877, 1491
NlaIII CATG 8 cut(s) 210, 226, 340, 485, 709, 1225, 1501, 1659
NlaIV GGNNCC 7 cut(s) 385, 520, 590, 690, 1126, 1255, 1450
NsiI ATGCAT 2 cut(s) 1570, 1651
PagI TCATGA 2 cut(s) 481, 1221
PciSI GCTCTTC 1 cut(s) 371
PctI GAATGC 1 cut(s) 1162
PkrI GCNGC 7 cut(s) 872, 901, 982, 1144, 1291, 1327, 1519
PleI GAGTC 3 cut(s) 244, 1012, 1205
PluTI GGCGCC 1 cut(s) 1452
PpsI GAGTC 3 cut(s) 244, 1012, 1205
Psp6I CCWGG 2 cut(s) 172, 905
PspFI CCCAGC 1 cut(s) 226
PspGI CCWGG 2 cut(s) 172, 905
PspN4I GGNNCC 7 cut(s) 385, 520, 590, 690, 1126, 1255, 1450
PspPI GGNCC 2 cut(s) 1552, 1681
PstI CTGCAG 2 cut(s) 1144, 1330
PsuI RGATCY 1 cut(s) 475
PvuII CAGCTG 1 cut(s) 1214
RsaI GTAC 3 cut(s) 1015, 1056, 1592
RsaNI GTAC 3 cut(s) 1014, 1055, 1591
RseI CAYNNNNRTG 2 cut(s) 931, 1654
SalI GTCGAC 1 cut(s) 1006
SapI GCTCTTC 1 cut(s) 371
SaqAI TTAA 4 cut(s) 192, 524, 740, 951
SatI GCNGC 7 cut(s) 871, 900, 981, 1143, 1290, 1326, 1518
Sau3AI GATC 5 cut(s) 475, 549, 699, 877, 1491
Sau96I GGNCC 2 cut(s) 1552, 1681
SchI GAGTC 3 cut(s) 244, 1013, 1206
ScrFI CCNGG 5 cut(s) 174, 907, 1555, 1556, 1679
SduI GDGCHC 1 cut(s) 1258
SfaNI GCATC 2 cut(s) 1154, 1577
SfcI CTRYAG 3 cut(s) 1026, 1140, 1326
SfoI GGCGCC 1 cut(s) 1450
SmaI CCCGGG 1 cut(s) 1556
SmiMI CAYNNNNRTG 2 cut(s) 931, 1654
SmlI CTYRAG 2 cut(s) 6, 823
SmoI CTYRAG 2 cut(s) 6, 823
Sse9I AATT 7 cut(s) 167, 270, 792, 1206, 1247, 1376, 1521
SsiI CCGC 4 cut(s) 21, 200, 534, 871
SspDI GGCGCC 1 cut(s) 1448
SspI AATATT 2 cut(s) 310, 1436
SspMI CTAG 4 cut(s) 321, 449, 563, 635
StyD4I CCNGG 5 cut(s) 172, 905, 1553, 1554, 1677
StyI CCWWGG 2 cut(s) 206, 562
TaaI ACNGT 7 cut(s) 265, 400, 723, 1364, 1489, 1513, 1583
TaiI ACGT 1 cut(s) 665
TaqI TCGA 3 cut(s) 1007, 1473, 1573
TasI AATT 7 cut(s) 167, 270, 792, 1206, 1247, 1376, 1521
TatI WGTACW 1 cut(s) 1590
TauI GCSGC 1 cut(s) 873
Tru1I TTAA 4 cut(s) 192, 524, 740, 951
Tru9I TTAA 4 cut(s) 192, 524, 740, 951
TscAI CASTG 5 cut(s) 162, 780, 880, 1554, 1588
TseI GCWGC 6 cut(s) 899, 980, 1142, 1289, 1325, 1517
TspDTI ATGAA 4 cut(s) 402, 703, 1210, 1486
TspGWI ACGGA 1 cut(s) 54
TspMI CCCGGG 1 cut(s) 1554
TspRI CASTG 5 cut(s) 162, 780, 880, 1554, 1588
XapI RAATTY 3 cut(s) 1206, 1247, 1376
XcmI CCANNNNNNNNNTGG 2 cut(s) 377, 1211
XmaI CCCGGG 1 cut(s) 1554
XmaJI CCTAGG 1 cut(s) 562
XmiI GTMKAC 2 cut(s) 511, 1007
XspI CTAG 4 cut(s) 321, 449, 563, 635
Zsp2I ATGCAT 2 cut(s) 1570, 1651
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.