Prupe.1G421500_v2.0.a1

nucleobase-ascorbate transporter

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
36409673 .. 36413451
3779 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G421500.1

Sequence Viewer

Length: 1962 bp
ATGGCTCAATCGGGCGGCGGTGGCGGTAACAATAACAGCAGCGGTAACAATAGCAATAACGGTGGTGGCGGTGGCGGTAACAATAGCAATAACGGTGGTGGACGTGGAGGCGGTAACAACAATAACAATAATGGCGGTGGCCGTGGAGGCGGCAACAACAATAACAATAATGGTGGTGGCCGTGGAGGCGGCAATGACAACCACAATAATGGTGGCGGCCGTGGTGGTGGTAACGACAATGACAGTAATGATGGCAGCCGTGGCGGTGGGAACAATAACGACAGTAATGGTGGCGGCCGTGGCAGCGGTAACAATAACAACAGTAATGGTGGTGGCCGCGGAGGCGGAGGCGGCAGTGGCGGTAACAATAACAATAATGGTGGTGGAAACAAGAAGGCGGAGAAGACAGAGGAGTTGCAGCCATACCCAGTAAAAGAGCAGCTGCCTGGTGTTCAGTACTGTGTTAACAGTCCTCCTCCGTGGCCTGAAGCTGTGATATTGGGTTTCCAGCATTACCTTTTGACTCTTGGTATTACAGTCTTCATTCCAAGTCTGCTTGTTCCTCAAATGGGTGGAGGTGATATTGAGAAGGCTAGGGTGGTGCAAACCATGCTCTTTGTTTCAGGGTTGAACACATTCATGCAATCTCTGTTCGGAACCCGGCTTCCCTCAGTGGTGGTGGGTTCATATACATATGTAATCCCCACAACTTCAATAATCCTAGCCAGTAGATACAAGGCAACCACAGACCCTCATGAGAAATTTTCGGAGACTATGCGAGGTATACAAGGCGCTCTAATCATCACTGCCAGTTTTCAGATGATTATGGGTTTCCTAGGCTTGTGGAGAATTGCTGTCAGGTTTCTTAGCCCTCTTTCTGTTGTCCCATTCATAACTTTTGCTGGACTTGGGCTCTCTCAGCTTGGTTTCCCTCTGTTGGCCAGATGTGTTGAACTTGGGCTTCCAGAGTTGATCATCGTGGTTTTCGTCTCACAGTATCTTTCTCGTTTTATACATACAAAGAGGCAAATCTGTGGCAGATTTTCAGTGCTGTTCTCTGTTGCAATTGTATGGTTGTTTGCACAAATTCTAACCTCAAGTGGTGTGTATAACAACACACCAGAAAACACTCAGATCAGTTGCCGCACCGATCGTTCTGGCCTTATTAGTGCAGCTCCCTGGATATATATTCCGTATCCTTTTCAATGGGGGAGCCCTACTTTTAATGCAGGAGAAGCTTTTGCAATGATTGCTGCTTCTTTTGTTTCTCTCTTCGAGTCCTCTGGTACATTTTATGCTACAGCAAGATATGGGAGTGCCACACCTGTACCACCTTCTGTCATTAGCCGCGGCGTTGGCTGGCTGGGTGTAGGAGTGTTACTAAATGGGATGTTTGGTTCTCCAACTGGCACTACTGCATCAGTGGAAAATGCTGGCCTATTGGCATTGACAAGAGTTGGAAGTCGTAGAGTTATCCAAATATCAGCCTTTTTCATGATTTTCTTCTCTGTATTTGGAAAAATCGGAGCACTTTTCGCTTCAATTCCTGTACCAATCATAGCAGCTCTTTATTGTGTCTTATTTGGCTACGTTGCTTCTGCAGGCCTTGGTTTTCTCCAATTTTGTAACCTGAACAGTTTCAGAACAAAATTTATATTGGGATTCTCTTTCTTCATGGGAGTTTCAGTACCACAATACTTCAGAGAATATAGGTCTGGCCATGATCACGGTGGTCCAAGATGGTTTGAGGACATAGTAAATGTCATCTTCATGTCACACACAACAGTAGCTGCTTTGGTTGGTGTAATATTGGATAACTCTCTGTCTCGTGAAAACGATGCATCGAGAAAAGACAGCGGTTTAAACTGGTGGGAGAAGTTCAGCTTATACCGTTCTGATGTTAGAAATGATGAATTCTACGCGCTGCCGTGCAGATTGGACAAGTTTTTCCCAGCCCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

654

Amino Acids

69.2

Weight (kDa)

9.31

Isoelectric Point (pI)

40.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0011640)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 784
AccII CGCG 3 cut(s) 339, 1350, 1922
AcoI YGGCCR 7 cut(s) 139, 178, 217, 295, 334, 939, 1717
AcsI RAATTY 4 cut(s) 761, 1086, 1649, 1913
AcuI CTGAAG 2 cut(s) 507, 1684
AfaI GTAC 5 cut(s) 458, 1288, 1329, 1551, 1689
AfiI CCNNNNNNNGG 2 cut(s) 569, 937
AgsI TTSAA 5 cut(s) 631, 714, 953, 1205, 1542
AjiI CACGTC 1 cut(s) 104
AjnI CCWGG 2 cut(s) 445, 1178
AloI GAACNNNNNNTCC 4 cut(s) 649, 681, 1381, 1413
AluBI AGCT 8 cut(s) 442, 491, 922, 1175, 1238, 1565, 1790, 1884
AluI AGCT 8 cut(s) 442, 491, 922, 1175, 1238, 1565, 1790, 1884
Alw21I GWGCWC 1 cut(s) 1531
Alw26I GTCTC 3 cut(s) 764, 994, 1830
AlwNI CAGNNNCTG 1 cut(s) 1790
ApoI RAATTY 4 cut(s) 761, 1086, 1649, 1913
Asp700I GAANNNNTTC 2 cut(s) 635, 1637
AspA2I CCTAGG 1 cut(s) 835
AspLEI GCGC 2 cut(s) 794, 1924
AspS9I GGNCC 1 cut(s) 1733
AsuC2I CCSGG 1 cut(s) 661
AsuHPI GGTGA 1 cut(s) 590
AvaII GGWCC 1 cut(s) 1733
AvrII CCTAGG 1 cut(s) 835
BaeI ACNNNNGTAYC 2 cut(s) 1311, 1344
BalI TGGCCA 2 cut(s) 941, 1719
BanII GRGCYC 2 cut(s) 915, 1217
BauI CACGAG 1 cut(s) 1827
BbsI GAAGAC 2 cut(s) 410, 532
Bbv12I GWGCWC 1 cut(s) 1531
BccI CCATC 2 cut(s) 245, 1734
BceAI ACGGC 6 cut(s) 126, 165, 204, 243, 282, 1912
BciT130I CCWGG 2 cut(s) 447, 1180
BciVI GTATCC 1 cut(s) 1206
BclI TGATCA 2 cut(s) 972, 1723
BcnI CCSGG 1 cut(s) 661
BcoDI GTCTC 3 cut(s) 764, 994, 1830
BfaI CTAG 3 cut(s) 594, 722, 836
BfmI CTRYAG 2 cut(s) 1299, 1599
BfoI RGCGCY 1 cut(s) 795
BfuI GTATCC 1 cut(s) 1206
BglI GCCNNNNNGGC 3 cut(s) 147, 186, 342
BlnI CCTAGG 1 cut(s) 835
BmcAI AGTACT 1 cut(s) 458
Bme1390I CCNGG 3 cut(s) 447, 661, 1180
Bme18I GGWCC 1 cut(s) 1733
BmgBI CACGTC 1 cut(s) 104
BmgT120I GGNCC 1 cut(s) 1733
BmiI GGNNCC 2 cut(s) 658, 1214
BmrFI CCNGG 3 cut(s) 447, 661, 1180
BmrI ACTGGG 1 cut(s) 422
BmsI GCATC 3 cut(s) 1427, 1828, 1850
BmuI ACTGGG 1 cut(s) 422
BpiI GAAGAC 2 cut(s) 410, 532
BpuEI CTTGAG 1 cut(s) 1081
BpuMI CCSGG 1 cut(s) 661
BsaXI ACNNNNNCTCC 2 cut(s) 1671, 1701
Bsc4I CCNNNNNNNGG 2 cut(s) 569, 937
Bse1I ACTGG 5 cut(s) 428, 726, 810, 1411, 1871
Bse3DI GCAATG 2 cut(s) 199, 1251
BseBI CCWGG 2 cut(s) 447, 1180
BseGI GGATG 1 cut(s) 1395
BseLI CCNNNNNNNGG 2 cut(s) 569, 937
BseMI GCAATG 2 cut(s) 199, 1251
BseMII CTCAG 3 cut(s) 684, 932, 1145
BseNI ACTGG 5 cut(s) 428, 726, 810, 1411, 1871
BseRI GAGGAG 2 cut(s) 425, 465
BseX3I CGGCCG 2 cut(s) 217, 295
BseYI CCCAGC 2 cut(s) 1363, 1951
BsgI GTGCAG 2 cut(s) 1191, 1951
Bsh1236I CGCG 3 cut(s) 339, 1350, 1922
Bsh1285I CGRYCG 3 cut(s) 220, 298, 1153
BsiEI CGRYCG 3 cut(s) 220, 298, 1153
BsiHKAI GWGCWC 1 cut(s) 1531
BsiSI CCGG 1 cut(s) 661
BslFI GGGAC 1 cut(s) 869
BslI CCNNNNNNNGG 2 cut(s) 569, 937
BsmAI GTCTC 3 cut(s) 764, 994, 1830
BsmBI CGTCTC 1 cut(s) 994
BsmFI GGGAC 1 cut(s) 869
Bsp1286I GDGCHC 3 cut(s) 915, 1217, 1531
Bsp143I GATC 4 cut(s) 972, 1134, 1150, 1723
BspCNI CTCAG 3 cut(s) 683, 931, 1144
BspFNI CGCG 3 cut(s) 339, 1350, 1922
BspHI TCATGA 2 cut(s) 754, 1494
BspLI GGNNCC 2 cut(s) 658, 1214
BspMAI CTGCAG 1 cut(s) 1603
BsrDI GCAATG 2 cut(s) 199, 1251
BsrI ACTGG 5 cut(s) 428, 726, 810, 1411, 1871
BssMI GATC 4 cut(s) 972, 1134, 1150, 1723
BssNAI GTATAC 1 cut(s) 785
BssSI CACGAG 1 cut(s) 1827
BssT1I CCWWGG 2 cut(s) 835, 1606
Bst1107I GTATAC 1 cut(s) 785
Bst2BI CACGAG 1 cut(s) 1827
Bst2UI CCWGG 2 cut(s) 447, 1180
Bst6I CTCTTC 1 cut(s) 1277
BstAPI GCANNNNNTGC 2 cut(s) 610, 1250
BstC8I GCNNGC 3 cut(s) 1361, 1435, 1603
BstDEI CTNAG 4 cut(s) 670, 866, 918, 1131
BstDSI CCRYGG 8 cut(s) 142, 181, 220, 259, 298, 337, 479, 1348
BstF5I GGATG 1 cut(s) 1395
BstFNI CGCG 3 cut(s) 339, 1350, 1922
BstH2I RGCGCY 1 cut(s) 795
BstHHI GCGC 2 cut(s) 794, 1924
BstKTI GATC 4 cut(s) 975, 1137, 1153, 1726
BstMAI GTCTC 3 cut(s) 764, 994, 1830
BstMBI GATC 4 cut(s) 972, 1134, 1150, 1723
BstMCI CGRYCG 3 cut(s) 220, 298, 1153
BstNI CCWGG 2 cut(s) 447, 1180
BstSCI CCNGG 3 cut(s) 445, 659, 1178
BstSFI CTRYAG 2 cut(s) 1299, 1599
BstUI CGCG 3 cut(s) 339, 1350, 1922
BstV2I GAAGAC 2 cut(s) 410, 532
BstXI CCANNNNNNTGG 1 cut(s) 209
BstZ17I GTATAC 1 cut(s) 785
BstZI CGGCCG 2 cut(s) 217, 295
BsuI GTATCC 1 cut(s) 1206
BtgI CCRYGG 8 cut(s) 142, 181, 220, 259, 298, 337, 479, 1348
BtrI CACGTC 1 cut(s) 104
BtsCI GGATG 1 cut(s) 1395
BtsI GCAGTG 2 cut(s) 361, 804
BtsIMutI CAGTG 5 cut(s) 361, 678, 804, 1053, 1428
Cac8I GCNNGC 3 cut(s) 1361, 1435, 1603
CaiI CAGNNNCTG 1 cut(s) 1790
CciI TCATGA 2 cut(s) 754, 1494
CfoI GCGC 2 cut(s) 794, 1924
Cfr13I GGNCC 1 cut(s) 1733
Cfr42I CCGCGG 2 cut(s) 340, 1351
Csp6I GTAC 5 cut(s) 457, 1287, 1328, 1550, 1688
CviAII CATG 7 cut(s) 610, 640, 755, 1495, 1675, 1721, 1771
CviQI GTAC 5 cut(s) 457, 1287, 1328, 1550, 1688
DdeI CTNAG 4 cut(s) 670, 866, 918, 1131
DpnI GATC 4 cut(s) 974, 1136, 1152, 1725
DpnII GATC 4 cut(s) 972, 1134, 1150, 1723
DraI TTTAAA 1 cut(s) 1863
EaeI YGGCCR 7 cut(s) 139, 178, 217, 295, 334, 939, 1717
EagI CGGCCG 2 cut(s) 217, 295
Eam1104I CTCTTC 1 cut(s) 1277
EarI CTCTTC 1 cut(s) 1277
EciI GGCGGA 2 cut(s) 360, 413
EclXI CGGCCG 2 cut(s) 217, 295
Eco130I CCWWGG 2 cut(s) 835, 1606
Eco147I AGGCCT 1 cut(s) 1605
Eco24I GRGCYC 2 cut(s) 915, 1217
Eco47I GGWCC 1 cut(s) 1733
Eco52I CGGCCG 2 cut(s) 217, 295
Eco57I CTGAAG 2 cut(s) 507, 1684
EcoRI GAATTC 1 cut(s) 1913
EcoRII CCWGG 2 cut(s) 445, 1178
EcoT14I CCWWGG 2 cut(s) 835, 1606
EcoT22I ATGCAT 1 cut(s) 1843
EcoT38I GRGCYC 2 cut(s) 915, 1217
ErhI CCWWGG 2 cut(s) 835, 1606
Esp3I CGTCTC 1 cut(s) 994
FaeI CATG 7 cut(s) 613, 643, 758, 1498, 1678, 1724, 1774
FalI AAGNNNNNCTT 2 cut(s) 1868, 1900
FaqI GGGAC 1 cut(s) 869
FatI CATG 7 cut(s) 609, 639, 754, 1494, 1674, 1720, 1770
FauNDI CATATG 1 cut(s) 694
FbaI TGATCA 2 cut(s) 972, 1723
FblI GTMKAC 1 cut(s) 784
FokI GGATG 1 cut(s) 1402
FriOI GRGCYC 2 cut(s) 915, 1217
FspBI CTAG 3 cut(s) 594, 722, 836
GlaI GCGC 2 cut(s) 793, 1923
GsaI CCCAGC 2 cut(s) 1367, 1955
HaeII RGCGCY 1 cut(s) 795
HapII CCGG 1 cut(s) 661
HhaI GCGC 2 cut(s) 794, 1924
Hin1II CATG 7 cut(s) 613, 643, 758, 1498, 1678, 1724, 1774
Hin6I GCGC 2 cut(s) 792, 1922
HinP1I GCGC 2 cut(s) 792, 1922
HincII GTYRAC 1 cut(s) 466
HindII GTYRAC 1 cut(s) 466
HindIII AAGCTT 1 cut(s) 1236
HinfI GANTC 3 cut(s) 523, 1277, 1662
HpaI GTTAAC 1 cut(s) 466
HpaII CCGG 1 cut(s) 661
HphI GGTGA 1 cut(s) 590
Hpy166II GTNNAC 3 cut(s) 101, 466, 785
Hpy188I TCNGA 8 cut(s) 656, 769, 819, 1134, 1526, 1643, 1703, 1897
Hpy188III TCNNGA 5 cut(s) 755, 965, 1495, 1829, 1845
Hpy8I GTNNAC 3 cut(s) 101, 466, 785
HpyAV CCTTC 3 cut(s) 388, 583, 1344
HpyCH4IV ACGT 2 cut(s) 103, 1590
HpyF3I CTNAG 4 cut(s) 670, 866, 918, 1131
HpySE526I ACGT 2 cut(s) 103, 1590
Hsp92II CATG 7 cut(s) 613, 643, 758, 1498, 1678, 1724, 1774
HspAI GCGC 2 cut(s) 792, 1922
Ksp22I TGATCA 2 cut(s) 972, 1723
KspAI GTTAAC 1 cut(s) 466
KspI CCGCGG 2 cut(s) 340, 1351
Kzo9I GATC 4 cut(s) 972, 1134, 1150, 1723
LmnI GCTCC 3 cut(s) 1180, 1212, 1526
LweI GCATC 3 cut(s) 1427, 1828, 1850
MaeI CTAG 3 cut(s) 594, 722, 836
MaeII ACGT 2 cut(s) 103, 1590
MalI GATC 4 cut(s) 974, 1136, 1152, 1725
MboI GATC 4 cut(s) 972, 1134, 1150, 1723
MboII GAAGA 6 cut(s) 415, 532, 1264, 1495, 1663, 1759
MfeI CAATTG 1 cut(s) 1065
MhlI GDGCHC 3 cut(s) 915, 1217, 1531
MlsI TGGCCA 2 cut(s) 941, 1719
MluCI AATT 8 cut(s) 761, 849, 1065, 1086, 1542, 1619, 1649, 1913
MluNI TGGCCA 2 cut(s) 941, 1719
MlyI GAGTC 2 cut(s) 517, 1286
MmeI TCCRAC 2 cut(s) 1427, 1438
Mox20I TGGCCA 2 cut(s) 941, 1719
Mph1103I ATGCAT 1 cut(s) 1843
MroXI GAANNNNTTC 2 cut(s) 635, 1637
MscI TGGCCA 2 cut(s) 941, 1719
MseI TTAA 3 cut(s) 465, 1224, 1862
MslI CAYNNNNRTG 3 cut(s) 207, 638, 1769
Msp20I TGGCCA 2 cut(s) 941, 1719
MspA1I CMGCKG 6 cut(s) 42, 306, 339, 442, 1350, 1857
MspI CCGG 1 cut(s) 661
MspR9I CCNGG 3 cut(s) 447, 661, 1180
MssI GTTTAAAC 1 cut(s) 1863
MunI CAATTG 1 cut(s) 1065
MvaI CCWGG 2 cut(s) 447, 1180
MvnI CGCG 3 cut(s) 339, 1350, 1922
NciI CCSGG 1 cut(s) 661
NdeI CATATG 1 cut(s) 694
NdeII GATC 4 cut(s) 972, 1134, 1150, 1723
NlaIII CATG 7 cut(s) 613, 643, 758, 1498, 1678, 1724, 1774
NlaIV GGNNCC 2 cut(s) 658, 1214
NmuCI GTSAC 1 cut(s) 1773
NsiI ATGCAT 1 cut(s) 1843
PagI TCATGA 2 cut(s) 754, 1494
PceI AGGCCT 1 cut(s) 1605
PcsI WCGNNNNNNNCGW 1 cut(s) 984
PdmI GAANNNNTTC 2 cut(s) 635, 1637
PfeI GAWTC 1 cut(s) 1662
Ple19I CGATCG 1 cut(s) 1153
PleI GAGTC 2 cut(s) 517, 1285
PmeI GTTTAAAC 1 cut(s) 1863
PpsI GAGTC 2 cut(s) 517, 1285
Psp6I CCWGG 2 cut(s) 445, 1178
PspFI CCCAGC 2 cut(s) 1363, 1951
PspGI CCWGG 2 cut(s) 445, 1178
PspN4I GGNNCC 2 cut(s) 658, 1214
PspPI GGNCC 1 cut(s) 1733
PstI CTGCAG 1 cut(s) 1603
PstNI CAGNNNCTG 1 cut(s) 1790
PvuI CGATCG 1 cut(s) 1153
PvuII CAGCTG 1 cut(s) 442
RsaI GTAC 5 cut(s) 458, 1288, 1329, 1551, 1689
RsaNI GTAC 5 cut(s) 457, 1287, 1328, 1550, 1688
RseI CAYNNNNRTG 3 cut(s) 207, 638, 1769
SacII CCGCGG 2 cut(s) 340, 1351
SaqAI TTAA 3 cut(s) 465, 1224, 1862
Sau3AI GATC 4 cut(s) 972, 1134, 1150, 1723
Sau96I GGNCC 1 cut(s) 1733
ScaI AGTACT 1 cut(s) 458
SchI GAGTC 2 cut(s) 517, 1286
ScrFI CCNGG 3 cut(s) 447, 661, 1180
SduI GDGCHC 3 cut(s) 915, 1217, 1531
SfaNI GCATC 3 cut(s) 1427, 1828, 1850
SfcI CTRYAG 2 cut(s) 1299, 1599
Sfr303I CCGCGG 2 cut(s) 340, 1351
SgrBI CCGCGG 2 cut(s) 340, 1351
SinI GGWCC 1 cut(s) 1733
SmiMI CAYNNNNRTG 3 cut(s) 207, 638, 1769
SmlI CTYRAG 1 cut(s) 1096
SmoI CTYRAG 1 cut(s) 1096
Sse9I AATT 8 cut(s) 761, 849, 1065, 1086, 1542, 1619, 1649, 1913
SseBI AGGCCT 1 cut(s) 1605
SspI AATATT 1 cut(s) 1809
SspMI CTAG 3 cut(s) 594, 722, 836
StuI AGGCCT 1 cut(s) 1605
StyD4I CCNGG 3 cut(s) 445, 659, 1178
StyI CCWWGG 2 cut(s) 835, 1606
TaiI ACGT 2 cut(s) 106, 1593
TaqI TCGA 2 cut(s) 1275, 1844
TasI AATT 8 cut(s) 761, 849, 1065, 1086, 1542, 1619, 1649, 1913
TatI WGTACW 1 cut(s) 456
TfiI GAWTC 1 cut(s) 1662
Tru1I TTAA 3 cut(s) 465, 1224, 1862
Tru9I TTAA 3 cut(s) 465, 1224, 1862
TscAI CASTG 5 cut(s) 361, 678, 811, 1053, 1428
TseFI GTSAC 1 cut(s) 1773
Tsp45I GTSAC 1 cut(s) 1773
TspDTI ATGAA 8 cut(s) 532, 628, 675, 880, 1483, 1663, 1759, 1926
TspGWI ACGGA 2 cut(s) 468, 1182
TspRI CASTG 5 cut(s) 361, 678, 811, 1053, 1428
VpaK11BI GGWCC 1 cut(s) 1733
XapI RAATTY 4 cut(s) 761, 1086, 1649, 1913
XcmI CCANNNNNNNNNTGG 2 cut(s) 209, 1727
XmaJI CCTAGG 1 cut(s) 835
XmiI GTMKAC 1 cut(s) 784
XmnI GAANNNNTTC 2 cut(s) 635, 1637
XspI CTAG 3 cut(s) 594, 722, 836
ZrmI AGTACT 1 cut(s) 458
Zsp2I ATGCAT 1 cut(s) 1843
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.