Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0011577

Physical Location & Seq

Genomic Coordinates Reverse (-)

19291304 .. 19294123

Gene Structure 2820 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1105200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1410 bp

ATGCTAGATCTGAACCTCGGCTTCGTCTCCCGCGACGACGTTTCCATGTCCCAAAACAAGCTTCTCACCCCCTCCCCGGTCGAATGCTCCGGAAGCTTCAACTCCTCCTCCAACCTCACTGTCACCGGCGACGACGATGACGACTCCACTACTCTCAATTTCCTTGCTCCGAACGACGGCGTATCCGCCAATCACCAAGACGGTCGGAGGACCATCCAGCTTTTTCCACTCGCACAATCCGTAAGCTCTTCTTCTTCGTCGTCGGCGGCTTCTAAAAAGCATTGGCTGGGACTATCGTCCGGTTCCCGATTGGAGCTTGAGCCGACTTACTATGCTCCCGCGGAGCCGAGGATCGCTCGCCCGCAGCAGGTGAAGAAGAGCCGGAGAGGGCCCAGGTCCCGGAGCTCGCAGTATCGGGGCGTTACGTTTTATCGAAGGACCGGGAGATGGGAATCCCATATTTGGGATTGCGGGAAACAAGTGTACTTGGGAGGATTTGACACTGCCCATGCTGCTGCTAGGGCGTATGATCGAGCTGCGATCAAGTTCCGCGGAATTGAGGCTGATATTAATTTCAGTGTCAGTGATTATGAGGATGATATTAAGCAGATGAGTAGTTTTACAAAGGAAGAGTTTGTGCATATCCTGCGTCGCCAGAGTACTGGTTTCTCCAGAGGAAGCTCAAAATTCAGGGGAGTCACTCTGCACAAATGCGGCCGCTGGGAAGCTCGTATGGGCCAGTTTCTAGGCAAGAAGTATGTATACCTTGGCCTATTTGATAGCGAGATTGAAGCTGCAAGGGCATACGACAAGGCTGCCATCAAATGCAATGGACGAGAAGCGGTCACCAACTTTGATCGAAGCTCGTATGATGGGGAGATAATGTCTGAGGCCAATAACGAAGGCAGCCACCAGAGTCTTGATCTGAACTTAGGAATTGCTCCGCCTTTGGTTTCTGAAATCCAAAAGGAGAACATGAATTTGAGAAGCTTTCCTTTTCAGCTAGGCTGCGACGACATTCCCATTCACTTGAGAGCAAGGAATGAGATCTCTGTTCCAGCACCCATGAGGTCTCATCTTTCTCATGGCTCAATTGTGGCGTCTAAGGAGCCTCCTATAATGAGCAACATGAATTCCAGTTTCTTTCCCTTTCATATGGAAAGAGCAACGGAGAAGAGTATGGATGTTAACTCATTTCCCAATTGGGCATGGCAAGTCCAAGGCCTGAATGGCGGGGCAACCTCCATGCCACTCTTCTCTGCTGCAGCATCATCAGGATTCCCCTCTTCAACAGCCACTTCATCGTCATCAGCTGTCACTCAACTTCATTTCCCTAACACGGCCATTCTCCACCACCATTTTTCACCATCATTCACCAACAACATCCCCCATTTCTATTGCAGAAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003002 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009908 GO:0010073 GO:0010093 GO:0010154 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0035670 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048316 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048444 GO:0048449 GO:0048467 GO:0048481 GO:0048507 GO:0048608 GO:0048646 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0090701 GO:0099402 GO:0140110 GO:1903506 GO:1905392 GO:1905393 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2

Protein Analysis

470

Amino Acids

51.95

Weight (kDa)

8.44

Isoelectric Point (pI)

64.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AP2	PF00847	137 - 185	4.1e-10	AP2 domain
AP2	PF00847	228 - 278	5.3e-09	AP2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011577)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g15180 FvH4_6g15180
malus_domestica	MD04G1105200.v1.1 MD12G1125900.v1.1
prunus_persica	Prupe.6G242400_v2.0.a1 Prupe.6G242400_v2.0.a1
pyrus_communis	pycom04g10050 pycom12g12410
rosa_chinensis	RchiOBHm_Chr3g0468481 RchiOBHm_Chr3g0468491
rosa_laevigata	RLG00000024425
rosa_roxburghii	Rroxscaffold_6G00412720
rosa_rugosa	Rorug03G0095700 Rorug03G0095700 Rorug03G0095700
rosa_samantha	Rh3AG143600 Rh3AG144100 Rh3BG166100 Rh3DG165700
rosa_wichuraiana	Rw3G013600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	358
Acc36I	ACCTGC	1 cut(s)	358
AccI	GTMKAC	1 cut(s)	762
AccII	CGCG	3 cut(s)	33, 341, 552
AccIII	TCCGGA	1 cut(s)	89
AclWI	GGATC	1 cut(s)	359
AcoI	YGGCCR	2 cut(s)	715, 1341
AcsI	RAATTY	3 cut(s)	686, 979, 1132
AcyI	GRCGYC	1 cut(s)	1100
AfaI	GTAC	2 cut(s)	485, 661
AfiI	CCNNNNNNNGG	8 cut(s)	76, 176, 367, 399, 447, 462, 463, 1339
AgsI	TTSAA	3 cut(s)	100, 791, 1290
AjnI	CCWGG	1 cut(s)	392
AjuI	GAANNNNNNNTTGG	2 cut(s)	45, 77
Alw21I	GWGCWC	1 cut(s)	407
Alw26I	GTCTC	2 cut(s)	31, 1077
AlwI	GGATC	1 cut(s)	359
AlwNI	CAGNNNCTG	1 cut(s)	1407
Aor13HI	TCCGGA	1 cut(s)	89
AoxI	GGCC	7 cut(s)	389, 715, 736, 769, 891, 1222, 1341
ApaI	GGGCCC	1 cut(s)	393
ApoI	RAATTY	3 cut(s)	686, 979, 1132
AseI	ATTAAT	1 cut(s)	570
AspS9I	GGNCC	6 cut(s)	210, 389, 390, 396, 438, 736
AsuC2I	CCSGG	3 cut(s)	77, 400, 442
AsuHPI	GGTGA	7 cut(s)	58, 115, 185, 382, 838, 1356, 1366
AvaII	GGWCC	3 cut(s)	210, 396, 438
BaeGI	GKGCMC	1 cut(s)	393
BanII	GRGCYC	2 cut(s)	393, 407
BarI	GAAGNNNNNNTAC	2 cut(s)	746, 778
Bbv12I	GWGCWC	1 cut(s)	407
BccI	CCATC	5 cut(s)	221, 441, 827, 866, 1375
BceAI	ACGGC	2 cut(s)	193, 1356
BcgI	CGANNNNNNTGC	2 cut(s)	797, 831
BciT130I	CCWGG	1 cut(s)	394
BciVI	GTATCC	1 cut(s)	193
BcnI	CCSGG	3 cut(s)	77, 400, 442
BcoDI	GTCTC	2 cut(s)	31, 1077
BfaI	CTAG	4 cut(s)	5, 519, 746, 1004
BfmI	CTRYAG	1 cut(s)	1263
BfuAI	ACCTGC	1 cut(s)	358
BfuI	GTATCC	1 cut(s)	193
BglI	GCCNNNNNGGC	1 cut(s)	1230
BglII	AGATCT	2 cut(s)	7, 1047
BmcAI	AGTACT	1 cut(s)	661
Bme1390I	CCNGG	4 cut(s)	77, 394, 400, 442
Bme18I	GGWCC	3 cut(s)	210, 396, 438
BmgT120I	GGNCC	6 cut(s)	210, 389, 390, 396, 438, 736
BmiI	GGNNCC	5 cut(s)	304, 345, 391, 398, 1110
BmrFI	CCNGG	4 cut(s)	77, 394, 400, 442
BmsI	GCATC	1 cut(s)	1277
BoxI	GACNNNNGTC	1 cut(s)	295
BplI	GAGNNNNNCTC	2 cut(s)	340, 372
BpmI	CTGGAG	1 cut(s)	655
BpuEI	CTTGAG	2 cut(s)	338, 1051
BpuMI	CCSGG	3 cut(s)	77, 400, 442
BsaBI	GATNNNNATC	1 cut(s)	451
BsaHI	GRCGYC	1 cut(s)	1100
BsaI	GGTCTC	1 cut(s)	1077
BsaJI	CCNNGG	8 cut(s)	16, 75, 339, 347, 392, 550, 766, 1219
BsaWI	WCCGGW	2 cut(s)	89, 299
BsaXI	ACNNNNNCTCC	4 cut(s)	92, 122, 869, 899
Bsc4I	CCNNNNNNNGG	8 cut(s)	76, 176, 367, 399, 447, 462, 463, 1339
Bse118I	RCCGGY	1 cut(s)	125
Bse1I	ACTGG	3 cut(s)	667, 739, 1137
Bse3DI	GCAATG	1 cut(s)	835
Bse8I	GATNNNNATC	1 cut(s)	451
BseAI	TCCGGA	1 cut(s)	89
BseBI	CCWGG	1 cut(s)	394
BseDI	CCNNGG	8 cut(s)	16, 75, 339, 347, 392, 550, 766, 1219
BseGI	GGATG	4 cut(s)	213, 601, 1189, 1383
BseJI	GATNNNNATC	1 cut(s)	451
BseLI	CCNNNNNNNGG	8 cut(s)	76, 176, 367, 399, 447, 462, 463, 1339
BseMI	GCAATG	1 cut(s)	835
BseMII	CTCAG	1 cut(s)	879
BseNI	ACTGG	3 cut(s)	667, 739, 1137
BseRI	GAGGAG	2 cut(s)	94, 97
BseSI	GKGCMC	1 cut(s)	393
BseX3I	CGGCCG	1 cut(s)	715
BseYI	CCCAGC	2 cut(s)	286, 720
BsgI	GTGCAG	1 cut(s)	689
Bsh1236I	CGCG	3 cut(s)	33, 341, 552
Bsh1285I	CGRYCG	3 cut(s)	81, 205, 718
BshFI	GGCC	7 cut(s)	391, 717, 738, 771, 893, 1224, 1343
BsiEI	CGRYCG	3 cut(s)	81, 205, 718
BsiHKAI	GWGCWC	1 cut(s)	407
BsiSI	CCGG	7 cut(s)	77, 90, 126, 300, 382, 400, 441
BslFI	GGGAC	3 cut(s)	34, 303, 382
BslI	CCNNNNNNNGG	8 cut(s)	76, 176, 367, 399, 447, 462, 463, 1339
BsmAI	GTCTC	2 cut(s)	31, 1077
BsmBI	CGTCTC	1 cut(s)	31
BsmFI	GGGAC	3 cut(s)	34, 303, 382
BsmI	GAATGC	1 cut(s)	89
BsnI	GGCC	7 cut(s)	391, 717, 738, 771, 893, 1224, 1343
Bso31I	GGTCTC	1 cut(s)	1077
Bsp120I	GGGCCC	1 cut(s)	389
Bsp1286I	GDGCHC	2 cut(s)	393, 407
Bsp13I	TCCGGA	1 cut(s)	89
Bsp143I	GATC	7 cut(s)	7, 351, 529, 540, 856, 922, 1047
BspANI	GGCC	7 cut(s)	391, 717, 738, 771, 893, 1224, 1343
BspCNI	CTCAG	1 cut(s)	880
BspEI	TCCGGA	1 cut(s)	89
BspFNI	CGCG	3 cut(s)	33, 341, 552
BspLI	GGNNCC	5 cut(s)	304, 345, 391, 398, 1110
BspMAI	CTGCAG	1 cut(s)	1267
BspMI	ACCTGC	1 cut(s)	358
BspPI	GGATC	1 cut(s)	359
BspQI	GCTCTTC	2 cut(s)	253, 371
BspTNI	GGTCTC	1 cut(s)	1077
BsrDI	GCAATG	1 cut(s)	835
BsrFI	RCCGGY	1 cut(s)	125
BsrI	ACTGG	3 cut(s)	667, 739, 1137
BssAI	RCCGGY	1 cut(s)	125
BssECI	CCNNGG	8 cut(s)	16, 75, 339, 347, 392, 550, 766, 1219
BssMI	GATC	7 cut(s)	7, 351, 529, 540, 856, 922, 1047
BssNAI	GTATAC	1 cut(s)	763
BssNI	GRCGYC	1 cut(s)	1100
BssT1I	CCWWGG	2 cut(s)	766, 1219
Bst1107I	GTATAC	1 cut(s)	763
Bst2UI	CCWGG	1 cut(s)	394
Bst4CI	ACNGT	2 cut(s)	121, 203
Bst6I	CTCTTC	6 cut(s)	253, 371, 624, 1169, 1259, 1291
BstACI	GRCGYC	1 cut(s)	1100
BstAPI	GCANNNNNTGC	1 cut(s)	646
BstC8I	GCNNGC	3 cut(s)	358, 362, 407
BstDEI	CTNAG	3 cut(s)	888, 931, 1104
BstDSI	CCRYGG	2 cut(s)	339, 550
BstEII	GGTNACC	1 cut(s)	844
BstF5I	GGATG	4 cut(s)	213, 601, 1189, 1383
BstFNI	CGCG	3 cut(s)	33, 341, 552
BstKTI	GATC	7 cut(s)	10, 354, 532, 543, 859, 925, 1050
BstMAI	GTCTC	2 cut(s)	31, 1077
BstMBI	GATC	7 cut(s)	7, 351, 529, 540, 856, 922, 1047
BstMCI	CGRYCG	3 cut(s)	81, 205, 718
BstMWI	GCNNNNNNNGC	6 cut(s)	93, 512, 521, 646, 800, 1230
BstNI	CCWGG	1 cut(s)	394
BstPAI	GACNNNNGTC	1 cut(s)	295
BstPI	GGTNACC	1 cut(s)	844
BstSCI	CCNGG	4 cut(s)	75, 392, 398, 440
BstSFI	CTRYAG	1 cut(s)	1263
BstSLI	GKGCMC	1 cut(s)	393
BstUI	CGCG	3 cut(s)	33, 341, 552
BstX2I	RGATCY	2 cut(s)	7, 1047
BstXI	CCANNNNNNTGG	1 cut(s)	662
BstYI	RGATCY	2 cut(s)	7, 1047
BstZ17I	GTATAC	1 cut(s)	763
BstZI	CGGCCG	1 cut(s)	715
BsuI	GTATCC	1 cut(s)	193
BsuRI	GGCC	7 cut(s)	391, 717, 738, 771, 893, 1224, 1343
BtgI	CCRYGG	2 cut(s)	339, 550
BtsCI	GGATG	4 cut(s)	213, 601, 1189, 1383
BtsI	GCAGTG	1 cut(s)	501
BtsIMutI	CAGTG	4 cut(s)	117, 501, 583, 589
BveI	ACCTGC	1 cut(s)	358
Cac8I	GCNNGC	3 cut(s)	358, 362, 407
CaiI	CAGNNNCTG	1 cut(s)	1407
CciNI	GCGGCCGC	1 cut(s)	715
Cfr10I	RCCGGY	1 cut(s)	125
Cfr13I	GGNCC	6 cut(s)	210, 389, 390, 396, 438, 736
Cfr42I	CCGCGG	2 cut(s)	342, 553
CseI	GACGC	2 cut(s)	638, 1089
Csp6I	GTAC	2 cut(s)	484, 660
CviAII	CATG	8 cut(s)	46, 509, 976, 1066, 1085, 1129, 1209, 1246
CviQI	GTAC	2 cut(s)	484, 660
DdeI	CTNAG	3 cut(s)	888, 931, 1104
DpnI	GATC	7 cut(s)	9, 353, 531, 542, 858, 924, 1049
DpnII	GATC	7 cut(s)	7, 351, 529, 540, 856, 922, 1047
EaeI	YGGCCR	2 cut(s)	715, 1341
EagI	CGGCCG	1 cut(s)	715
Eam1104I	CTCTTC	6 cut(s)	253, 371, 624, 1169, 1259, 1291
EarI	CTCTTC	6 cut(s)	253, 371, 624, 1169, 1259, 1291
EciI	GGCGGA	2 cut(s)	175, 933
Ecl136II	GAGCTC	1 cut(s)	405
EclXI	CGGCCG	1 cut(s)	715
Eco130I	CCWWGG	2 cut(s)	766, 1219
Eco147I	AGGCCT	1 cut(s)	1224
Eco24I	GRGCYC	2 cut(s)	393, 407
Eco31I	GGTCTC	1 cut(s)	1077
Eco47I	GGWCC	3 cut(s)	210, 396, 438
Eco52I	CGGCCG	1 cut(s)	715
Eco53kI	GAGCTC	1 cut(s)	405
Eco91I	GGTNACC	1 cut(s)	844
EcoICRI	GAGCTC	1 cut(s)	405
EcoO109I	RGGNCCY	2 cut(s)	389, 396
EcoO65I	GGTNACC	1 cut(s)	844
EcoRI	GAATTC	1 cut(s)	1132
EcoRII	CCWGG	1 cut(s)	392
EcoT14I	CCWWGG	2 cut(s)	766, 1219
EcoT38I	GRGCYC	2 cut(s)	393, 407
ErhI	CCWWGG	2 cut(s)	766, 1219
Esp3I	CGTCTC	1 cut(s)	31
FaeI	CATG	8 cut(s)	49, 512, 979, 1069, 1088, 1132, 1212, 1249
FalI	AAGNNNNNCTT	4 cut(s)	235, 267, 979, 1011
FaqI	GGGAC	3 cut(s)	34, 303, 382
FatI	CATG	8 cut(s)	45, 508, 975, 1065, 1084, 1128, 1208, 1245
FauI	CCCGC	5 cut(s)	38, 346, 369, 464, 1226
FauNDI	CATATG	1 cut(s)	1155
FblI	GTMKAC	1 cut(s)	762
FokI	GGATG	4 cut(s)	200, 608, 1196, 1370
FriOI	GRGCYC	2 cut(s)	393, 407
FspBI	CTAG	4 cut(s)	5, 519, 746, 1004
GsaI	CCCAGC	2 cut(s)	290, 724
GsuI	CTGGAG	1 cut(s)	655
HaeIII	GGCC	7 cut(s)	391, 717, 738, 771, 893, 1224, 1343
HapII	CCGG	7 cut(s)	77, 90, 126, 300, 382, 400, 441
HgaI	GACGC	2 cut(s)	638, 1089
Hin1I	GRCGYC	1 cut(s)	1100
Hin1II	CATG	8 cut(s)	49, 512, 979, 1069, 1088, 1132, 1212, 1249
HincII	GTYRAC	1 cut(s)	1189
HindII	GTYRAC	1 cut(s)	1189
HindIII	AAGCTT	3 cut(s)	59, 94, 988
HinfI	GANTC	5 cut(s)	143, 452, 696, 916, 1278
HpaI	GTTAAC	1 cut(s)	1189
HpaII	CCGG	7 cut(s)	77, 90, 126, 300, 382, 400, 441
HphI	GGTGA	7 cut(s)	58, 115, 185, 382, 838, 1356, 1366
Hpy166II	GTNNAC	3 cut(s)	484, 763, 1189
Hpy188I	TCNGA	6 cut(s)	12, 171, 207, 889, 927, 958
Hpy188III	TCNNGA	5 cut(s)	90, 306, 672, 920, 1275
Hpy8I	GTNNAC	3 cut(s)	484, 763, 1189
Hpy99I	CGWCG	9 cut(s)	38, 41, 134, 137, 179, 262, 265, 654, 1016
HpyAV	CCTTC	2 cut(s)	429, 896
HpyCH4III	ACNGT	2 cut(s)	121, 203
HpyCH4IV	ACGT	2 cut(s)	39, 425
HpyCH4V	TGCA	6 cut(s)	640, 706, 797, 828, 1265, 1401
HpyF10VI	GCNNNNNNNGC	6 cut(s)	93, 512, 521, 646, 800, 1230
HpyF3I	CTNAG	3 cut(s)	888, 931, 1104
HpySE526I	ACGT	2 cut(s)	39, 425
Hsp92I	GRCGYC	1 cut(s)	1100
Hsp92II	CATG	8 cut(s)	49, 512, 979, 1069, 1088, 1132, 1212, 1249
Kpn2I	TCCGGA	1 cut(s)	89
KspAI	GTTAAC	1 cut(s)	1189
KspI	CCGCGG	2 cut(s)	342, 553
Kzo9I	GATC	7 cut(s)	7, 351, 529, 540, 856, 922, 1047
LguI	GCTCTTC	2 cut(s)	253, 371
LmnI	GCTCC	8 cut(s)	92, 172, 313, 340, 343, 402, 946, 1108
LweI	GCATC	1 cut(s)	1277
MaeI	CTAG	4 cut(s)	5, 519, 746, 1004
MaeII	ACGT	2 cut(s)	39, 425
MaeIII	GTNAC	5 cut(s)	121, 421, 697, 844, 1315
MalI	GATC	7 cut(s)	9, 353, 531, 542, 858, 924, 1049
MboI	GATC	7 cut(s)	7, 351, 529, 540, 856, 922, 1047
MboII	GAAGA	9 cut(s)	240, 243, 246, 385, 388, 641, 1186, 1246, 1278
MfeI	CAATTG	2 cut(s)	1092, 1201
MflI	RGATCY	2 cut(s)	7, 1047
MhlI	GDGCHC	2 cut(s)	393, 407
MluCI	AATT	9 cut(s)	157, 555, 571, 686, 936, 979, 1092, 1132, 1201
MlyI	GAGTC	3 cut(s)	137, 705, 925
MmeI	TCCRAC	2 cut(s)	135, 185
MroI	TCCGGA	1 cut(s)	89
MseI	TTAA	3 cut(s)	570, 603, 1188
MspA1I	CMGCKG	4 cut(s)	341, 552, 720, 1313
MspI	CCGG	7 cut(s)	77, 90, 126, 300, 382, 400, 441
MspR9I	CCNGG	4 cut(s)	77, 394, 400, 442
MunI	CAATTG	2 cut(s)	1092, 1201
Mva1269I	GAATGC	1 cut(s)	89
MvaI	CCWGG	1 cut(s)	394
MvnI	CGCG	3 cut(s)	33, 341, 552
MwoI	GCNNNNNNNGC	6 cut(s)	93, 512, 521, 646, 800, 1230
NciI	CCSGG	3 cut(s)	77, 400, 442
NdeI	CATATG	1 cut(s)	1155
NdeII	GATC	7 cut(s)	7, 351, 529, 540, 856, 922, 1047
NlaIII	CATG	8 cut(s)	49, 512, 979, 1069, 1088, 1132, 1212, 1249
NlaIV	GGNNCC	5 cut(s)	304, 345, 391, 398, 1110
NmeAIII	GCCGAG	1 cut(s)	372
NmuCI	GTSAC	4 cut(s)	121, 697, 844, 1315
NotI	GCGGCCGC	1 cut(s)	715
PaqCI	CACCTGC	1 cut(s)	358
PceI	AGGCCT	1 cut(s)	1224
PciSI	GCTCTTC	2 cut(s)	253, 371
PcsI	WCGNNNNNNNCGW	3 cut(s)	30, 138, 237
PctI	GAATGC	1 cut(s)	89
PfeI	GAWTC	2 cut(s)	452, 1278
PfoI	TCCNGGA	1 cut(s)	398
PleI	GAGTC	3 cut(s)	137, 704, 924
PpsI	GAGTC	3 cut(s)	137, 704, 924
PpuMI	RGGWCCY	1 cut(s)	396
PshAI	GACNNNNGTC	1 cut(s)	295
PshBI	ATTAAT	1 cut(s)	570
Psp124BI	GAGCTC	1 cut(s)	407
Psp5II	RGGWCCY	1 cut(s)	396
Psp6I	CCWGG	1 cut(s)	392
PspEI	GGTNACC	1 cut(s)	844
PspFI	CCCAGC	2 cut(s)	286, 720
PspGI	CCWGG	1 cut(s)	392
PspN4I	GGNNCC	5 cut(s)	304, 345, 391, 398, 1110
PspOMI	GGGCCC	1 cut(s)	389
PspPI	GGNCC	6 cut(s)	210, 389, 390, 396, 438, 736
PspPPI	RGGWCCY	1 cut(s)	396
PstI	CTGCAG	1 cut(s)	1267
PstNI	CAGNNNCTG	1 cut(s)	1407
PsuI	RGATCY	2 cut(s)	7, 1047
PvuII	CAGCTG	1 cut(s)	1313
RsaI	GTAC	2 cut(s)	485, 661
RsaNI	GTAC	2 cut(s)	484, 660
SacI	GAGCTC	1 cut(s)	407
SacII	CCGCGG	2 cut(s)	342, 553
SapI	GCTCTTC	2 cut(s)	253, 371
SaqAI	TTAA	3 cut(s)	570, 603, 1188
Sau3AI	GATC	7 cut(s)	7, 351, 529, 540, 856, 922, 1047
Sau96I	GGNCC	6 cut(s)	210, 389, 390, 396, 438, 736
ScaI	AGTACT	1 cut(s)	661
SchI	GAGTC	3 cut(s)	137, 705, 925
ScrFI	CCNGG	4 cut(s)	77, 394, 400, 442
SduI	GDGCHC	2 cut(s)	393, 407
SfaNI	GCATC	1 cut(s)	1277
SfcI	CTRYAG	1 cut(s)	1263
Sfr303I	CCGCGG	2 cut(s)	342, 553
SgrAI	CRCCGGYG	1 cut(s)	125
SgrBI	CCGCGG	2 cut(s)	342, 553
SinI	GGWCC	3 cut(s)	210, 396, 438
SmlI	CTYRAG	2 cut(s)	317, 1030
SmoI	CTYRAG	2 cut(s)	317, 1030
Sse9I	AATT	9 cut(s)	157, 555, 571, 686, 936, 979, 1092, 1132, 1201
SseBI	AGGCCT	1 cut(s)	1224
SspMI	CTAG	4 cut(s)	5, 519, 746, 1004
SstI	GAGCTC	1 cut(s)	407
StuI	AGGCCT	1 cut(s)	1224
StyD4I	CCNGG	4 cut(s)	75, 392, 398, 440
StyI	CCWWGG	2 cut(s)	766, 1219
TaaI	ACNGT	2 cut(s)	121, 203
TaiI	ACGT	2 cut(s)	42, 428
TaqI	TCGA	4 cut(s)	81, 433, 532, 859
TasI	AATT	9 cut(s)	157, 555, 571, 686, 936, 979, 1092, 1132, 1201
TatI	WGTACW	2 cut(s)	483, 659
TauI	GCSGC	3 cut(s)	269, 717, 720
TfiI	GAWTC	2 cut(s)	452, 1278
Tru1I	TTAA	3 cut(s)	570, 603, 1188
Tru9I	TTAA	3 cut(s)	570, 603, 1188
TscAI	CASTG	4 cut(s)	124, 508, 583, 589
TseFI	GTSAC	4 cut(s)	121, 697, 844, 1315
Tsp45I	GTSAC	4 cut(s)	121, 697, 844, 1315
TspDTI	ATGAA	5 cut(s)	992, 1142, 1145, 1290, 1316
TspGWI	ACGGA	2 cut(s)	229, 1184
TspRI	CASTG	4 cut(s)	124, 508, 583, 589
VpaK11BI	GGWCC	3 cut(s)	210, 396, 438
VspI	ATTAAT	1 cut(s)	570
XapI	RAATTY	3 cut(s)	686, 979, 1132
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1226
XmiI	GTMKAC	1 cut(s)	762
XspI	CTAG	4 cut(s)	5, 519, 746, 1004
ZrmI	AGTACT	1 cut(s)	661

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.