Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3A

Orthogroup ID

OG0011577

Physical Location & Seq

Genomic Coordinates Forward (+)

12689908 .. 12703405

Gene Structure 13498 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3AG143600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1386 bp

ATGCTAGATCTCAACCTCAACTTCTACACTCCCGAAATGGAGACCTCCGCCGCGAGCAGCTTCAACGACTCCTCCAACGACTCCTCCTCCTCCGCCACCCTCAACTTCCTCGACCTCCAAAACGACGTCGCCGCCCCCCCTTACGACGACGCCGATCATCATGACTACTTCGACGGCCGCACCATCCAGCTCTTCCCTCCTCAACCCCAGCCGCCCCTACGGTCCTCGACGACCAAGCAGTGGCTGGGGCTCTCCTCCGGCGGAGCACCGCAGCGTTACTCTGCTCCTCCTCCTCCTCCGCCGCTCGCGGAGCAGAGGATCGTGCCTCTCCCGGAGAAGGTCAAGAAGAGCCGCCGGGGACCGAGGTCCCGGAGCTCGCAGTATCGCGGCGTCACGTTTTATCGGAGGACCGGGAGATGGGAATCGCATATTTGGGATAATGGGAAGCAGGTGTACTTGGGTGGATTTGACACTGCGCATTCTGCAGCTAGGGCTTATGATCGAGCTGCGATAAAGTTCCGTGGAACTGAGGCTGATATTAATTTCAACGTTAGTGATTATGATGAGGATATTAAGCAGATGAGTAAATTTACAAAGGAAGAGTTTGTGCATATCCTGCGTCGCCAGAGCACCGGATTCGCCAGAGGAAGCTCGAAATACAGGGGAGTCACGCTGCACAAATGTGGCCGCTGGGAAGCTCGTATGGGCCAGTTGCTGGGCAAGAAGTATATATACCTTGGCCTATTTGATAGCGAGATTGAAGCTGCAAGAGCATATGACCAGGCTGCCATCAAATGCCATGGAAGGGAAGCGGTCACCAACTTTAATCCAAGCTTATATGATGGGGAGATAATGGCTGAGGCCAACAATGCAGGCATCGATGATAGTCTTGATCTAAACTTGGGAATTGCTCCCCCCTTGGCTTCTGACTGTCCGAATGAGAACATCAACTTGAGCAGCTTTCCTTTTCAGCTAGGCTGCAATGACAATCCTGTTAACATGACAGCAAGGAATGAGAATTCTGTTCCAGGACTTCCAGCAACTATGAGGACTCAACTGCCTCATGGCTCAATGGTGGCATCTACAGAGCCTCCTCTAATGAACAGCATGAACTCCAACTTCTTTCCCATCCATATGGAAAGAGCAATGGAGAAGAGTATGGATGCTAACTCCTTCCCTAACTGGGCATGGCAAATGCAAGTCCTTAATGATGGAGCAACTCCAGTGCCACTCTTCTCTGCGGCAGCATCATCAGGATTCCCTTCTTCAACAACAGAATCATCAGCTCCGATCCCTCCACTTCATTTTCCCAACACATCATTTCTCCAGCGCCACTTTTCACCATCGTTCACCAACAAAACACCCCATTTCTATTGCAGGAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003002 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009908 GO:0010073 GO:0010093 GO:0010154 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0035670 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048316 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048444 GO:0048449 GO:0048467 GO:0048481 GO:0048507 GO:0048608 GO:0048646 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0090701 GO:0099402 GO:0140110 GO:1903506 GO:1905392 GO:1905393 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2

Protein Analysis

461

Amino Acids

51.27

Weight (kDa)

6.32

Isoelectric Point (pI)

59.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AP2	PF00847	127 - 175	7.7e-11	AP2 domain
AP2	PF00847	218 - 268	1.3e-09	AP2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011577)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g15180 FvH4_6g15180
malus_domestica	MD04G1105200.v1.1 MD12G1125900.v1.1
prunus_persica	Prupe.6G242400_v2.0.a1 Prupe.6G242400_v2.0.a1
pyrus_communis	pycom04g10050 pycom12g12410
rosa_chinensis	RchiOBHm_Chr3g0468481 RchiOBHm_Chr3g0468491
rosa_laevigata	RLG00000024425
rosa_roxburghii	Rroxscaffold_6G00412720
rosa_rugosa	Rorug03G0095700 Rorug03G0095700 Rorug03G0095700
rosa_samantha	Rh3AG143600 Rh3AG144100 Rh3BG166100 Rh3DG165700
rosa_wichuraiana	Rw3G013600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	439
AatII	GACGTC	1 cut(s)	129
Acc16I	TGCGCA	1 cut(s)	477
Acc36I	ACCTGC	1 cut(s)	439
AccB7I	CCANNNNNTGG	2 cut(s)	240, 715
AccBSI	CCGCTC	1 cut(s)	304
AccII	CGCG	3 cut(s)	53, 308, 387
AclI	AACGTT	1 cut(s)	549
AclWI	GGATC	2 cut(s)	326, 1285
AcoI	YGGCCR	2 cut(s)	175, 685
AcsI	RAATTY	2 cut(s)	587, 1018
AcyI	GRCGYC	3 cut(s)	126, 150, 390
AfaI	GTAC	1 cut(s)	455
AfiI	CCNNNNNNNGG	6 cut(s)	240, 337, 417, 715, 805, 1183
AgsI	TTSAA	4 cut(s)	64, 547, 761, 1269
AjnI	CCWGG	2 cut(s)	780, 1027
AleI	CACNNNNGTG	1 cut(s)	681
Alw21I	GWGCWC	3 cut(s)	268, 377, 632
Alw26I	GTCTC	1 cut(s)	35
AlwI	GGATC	2 cut(s)	326, 1285
AlwNI	CAGNNNCTG	3 cut(s)	244, 715, 1383
AoxI	GGCC	5 cut(s)	175, 685, 706, 739, 861
ApoI	RAATTY	2 cut(s)	587, 1018
AseI	ATTAAT	1 cut(s)	540
AspLEI	GCGC	2 cut(s)	478, 1332
AspS9I	GGNCC	5 cut(s)	222, 359, 366, 408, 706
AsuC2I	CCSGG	4 cut(s)	332, 356, 370, 412
AsuHPI	GGTGA	3 cut(s)	808, 1332, 1342
AvaII	GGWCC	4 cut(s)	222, 359, 366, 408
BanII	GRGCYC	2 cut(s)	252, 377
BarI	GAAGNNNNNNTAC	4 cut(s)	437, 469, 716, 748
Bbv12I	GWGCWC	3 cut(s)	268, 377, 632
BbvCI	CCTCAGC	1 cut(s)	858
BccI	CCATC	7 cut(s)	191, 411, 797, 836, 1136, 1205, 1351
BceAI	ACGGC	1 cut(s)	190
BcgI	CGANNNNNNTGC	2 cut(s)	619, 653
BciT130I	CCWGG	2 cut(s)	782, 1029
BcnI	CCSGG	4 cut(s)	332, 356, 370, 412
BcoDI	GTCTC	1 cut(s)	35
BfaI	CTAG	3 cut(s)	5, 489, 974
BfmI	CTRYAG	2 cut(s)	483, 1083
BfoI	RGCGCY	1 cut(s)	1333
BfuAI	ACCTGC	1 cut(s)	439
BglII	AGATCT	1 cut(s)	7
Bme1390I	CCNGG	6 cut(s)	332, 356, 370, 412, 782, 1029
Bme18I	GGWCC	4 cut(s)	222, 359, 366, 408
BmgT120I	GGNCC	5 cut(s)	222, 359, 366, 408, 706
BmiI	GGNNCC	2 cut(s)	360, 368
BmrFI	CCNGG	6 cut(s)	332, 356, 370, 412, 782, 1029
BmrI	ACTGGG	1 cut(s)	1192
BmsI	GCATC	4 cut(s)	885, 1088, 1153, 1256
BmuI	ACTGGG	1 cut(s)	1192
BoxI	GACNNNNGTC	1 cut(s)	364
BpmI	CTGGAG	2 cut(s)	1206, 1310
Bpu10I	CCTNAGC	1 cut(s)	858
BpuEI	CTTGAG	1 cut(s)	973
BpuMI	CCSGG	4 cut(s)	332, 356, 370, 412
Bsa29I	ATCGAT	1 cut(s)	879
BsaBI	GATNNNNATC	1 cut(s)	421
BsaHI	GRCGYC	3 cut(s)	126, 150, 390
BsaI	GGTCTC	1 cut(s)	35
BsaJI	CCNNGG	6 cut(s)	355, 362, 520, 736, 799, 918
BsaWI	WCCGGW	1 cut(s)	632
BsaXI	ACNNNNNCTCC	8 cut(s)	56, 68, 71, 86, 98, 101, 1075, 1105
Bsc4I	CCNNNNNNNGG	6 cut(s)	240, 337, 417, 715, 805, 1183
Bse1I	ACTGG	3 cut(s)	709, 1187, 1223
Bse3DI	GCAATG	2 cut(s)	988, 1152
Bse8I	GATNNNNATC	1 cut(s)	421
BseBI	CCWGG	2 cut(s)	782, 1029
BseCI	ATCGAT	1 cut(s)	879
BseDI	CCNNGG	6 cut(s)	355, 362, 520, 736, 799, 918
BseGI	GGATG	3 cut(s)	183, 1128, 1168
BseJI	GATNNNNATC	1 cut(s)	421
BseLI	CCNNNNNNNGG	6 cut(s)	240, 337, 417, 715, 805, 1183
BseMI	GCAATG	2 cut(s)	988, 1152
BseMII	CTCAG	2 cut(s)	519, 849
BseNI	ACTGG	3 cut(s)	709, 1187, 1223
BseX3I	CGGCCG	1 cut(s)	175
BseYI	CCCAGC	4 cut(s)	207, 244, 690, 715
BsgI	GTGCAG	1 cut(s)	659
Bsh1236I	CGCG	3 cut(s)	53, 308, 387
Bsh1285I	CGRYCG	1 cut(s)	178
BshFI	GGCC	5 cut(s)	177, 687, 708, 741, 863
BshVI	ATCGAT	1 cut(s)	879
BsiEI	CGRYCG	1 cut(s)	178
BsiHKAI	GWGCWC	3 cut(s)	268, 377, 632
BsiSI	CCGG	6 cut(s)	258, 332, 355, 370, 411, 633
BslFI	GGGAC	2 cut(s)	352, 372
BslI	CCNNNNNNNGG	6 cut(s)	240, 337, 417, 715, 805, 1183
BsmAI	GTCTC	1 cut(s)	35
BsmFI	GGGAC	2 cut(s)	352, 372
BsmI	GAATGC	1 cut(s)	478
BsnI	GGCC	5 cut(s)	177, 687, 708, 741, 863
Bso31I	GGTCTC	1 cut(s)	35
Bsp1286I	GDGCHC	4 cut(s)	252, 268, 377, 632
Bsp143I	GATC	6 cut(s)	7, 154, 318, 499, 892, 1290
Bsp19I	CCATGG	1 cut(s)	799
BspANI	GGCC	5 cut(s)	177, 687, 708, 741, 863
BspCNI	CTCAG	2 cut(s)	520, 850
BspDI	ATCGAT	1 cut(s)	879
BspFNI	CGCG	3 cut(s)	53, 308, 387
BspHI	TCATGA	1 cut(s)	160
BspLI	GGNNCC	2 cut(s)	360, 368
BspMAI	CTGCAG	1 cut(s)	487
BspMI	ACCTGC	1 cut(s)	439
BspPI	GGATC	2 cut(s)	326, 1285
BspQI	GCTCTTC	2 cut(s)	197, 341
BspTNI	GGTCTC	1 cut(s)	35
BsrBI	CCGCTC	1 cut(s)	304
BsrDI	GCAATG	2 cut(s)	988, 1152
BsrI	ACTGG	3 cut(s)	709, 1187, 1223
BssECI	CCNNGG	6 cut(s)	355, 362, 520, 736, 799, 918
BssMI	GATC	6 cut(s)	7, 154, 318, 499, 892, 1290
BssNI	GRCGYC	3 cut(s)	126, 150, 390
BssT1I	CCWWGG	3 cut(s)	736, 799, 918
Bst2UI	CCWGG	2 cut(s)	782, 1029
Bst4CI	ACNGT	2 cut(s)	222, 932
Bst6I	CTCTTC	5 cut(s)	197, 341, 594, 1148, 1238
BstACI	GRCGYC	3 cut(s)	126, 150, 390
BstAPI	GCANNNNNTGC	1 cut(s)	616
BstC8I	GCNNGC	4 cut(s)	55, 306, 377, 874
BstDEI	CTNAG	2 cut(s)	528, 858
BstDSI	CCRYGG	2 cut(s)	520, 799
BstEII	GGTNACC	1 cut(s)	814
BstF5I	GGATG	3 cut(s)	183, 1128, 1168
BstFNI	CGCG	3 cut(s)	53, 308, 387
BstH2I	RGCGCY	1 cut(s)	1333
BstHHI	GCGC	2 cut(s)	478, 1332
BstKTI	GATC	6 cut(s)	10, 157, 321, 502, 895, 1293
BstMAI	GTCTC	1 cut(s)	35
BstMBI	GATC	6 cut(s)	7, 154, 318, 499, 892, 1290
BstMCI	CGRYCG	1 cut(s)	178
BstMWI	GCNNNNNNNGC	6 cut(s)	310, 482, 491, 616, 770, 869
BstNI	CCWGG	2 cut(s)	782, 1029
BstPAI	GACNNNNGTC	1 cut(s)	364
BstPI	GGTNACC	1 cut(s)	814
BstSCI	CCNGG	6 cut(s)	330, 354, 368, 410, 780, 1027
BstSFI	CTRYAG	2 cut(s)	483, 1083
BstUI	CGCG	3 cut(s)	53, 308, 387
BstX2I	RGATCY	1 cut(s)	7
BstXI	CCANNNNNNTGG	1 cut(s)	1135
BstYI	RGATCY	1 cut(s)	7
BstZI	CGGCCG	1 cut(s)	175
Bsu15I	ATCGAT	1 cut(s)	879
BsuRI	GGCC	5 cut(s)	177, 687, 708, 741, 863
BsuTUI	ATCGAT	1 cut(s)	879
BtgI	CCRYGG	2 cut(s)	520, 799
BtsCI	GGATG	3 cut(s)	183, 1128, 1168
BtsI	GCAGTG	2 cut(s)	245, 471
BtsIMutI	CAGTG	3 cut(s)	245, 471, 1230
BveI	ACCTGC	1 cut(s)	439
Cac8I	GCNNGC	4 cut(s)	55, 306, 377, 874
CaiI	CAGNNNCTG	3 cut(s)	244, 715, 1383
CciI	TCATGA	1 cut(s)	160
CfoI	GCGC	2 cut(s)	478, 1332
Cfr13I	GGNCC	5 cut(s)	222, 359, 366, 408, 706
ClaI	ATCGAT	1 cut(s)	879
CseI	GACGC	3 cut(s)	158, 379, 608
Csp6I	GTAC	1 cut(s)	454
CviAII	CATG	6 cut(s)	161, 800, 1000, 1064, 1108, 1188
CviQI	GTAC	1 cut(s)	454
DdeI	CTNAG	2 cut(s)	528, 858
DpnI	GATC	6 cut(s)	9, 156, 320, 501, 894, 1292
DpnII	GATC	6 cut(s)	7, 154, 318, 499, 892, 1290
EaeI	YGGCCR	2 cut(s)	175, 685
EagI	CGGCCG	1 cut(s)	175
Eam1104I	CTCTTC	5 cut(s)	197, 341, 594, 1148, 1238
EarI	CTCTTC	5 cut(s)	197, 341, 594, 1148, 1238
EciI	GGCGGA	4 cut(s)	37, 82, 276, 288
Ecl136II	GAGCTC	1 cut(s)	375
EclXI	CGGCCG	1 cut(s)	175
Eco130I	CCWWGG	3 cut(s)	736, 799, 918
Eco24I	GRGCYC	2 cut(s)	252, 377
Eco31I	GGTCTC	1 cut(s)	35
Eco47I	GGWCC	4 cut(s)	222, 359, 366, 408
Eco52I	CGGCCG	1 cut(s)	175
Eco53kI	GAGCTC	1 cut(s)	375
Eco91I	GGTNACC	1 cut(s)	814
EcoICRI	GAGCTC	1 cut(s)	375
EcoO109I	RGGNCCY	1 cut(s)	366
EcoO65I	GGTNACC	1 cut(s)	814
EcoRI	GAATTC	1 cut(s)	1018
EcoRII	CCWGG	2 cut(s)	780, 1027
EcoT14I	CCWWGG	3 cut(s)	736, 799, 918
EcoT38I	GRGCYC	2 cut(s)	252, 377
ErhI	CCWWGG	3 cut(s)	736, 799, 918
FaeI	CATG	6 cut(s)	164, 803, 1003, 1067, 1111, 1191
FaqI	GGGAC	2 cut(s)	352, 372
FatI	CATG	6 cut(s)	160, 799, 999, 1063, 1107, 1187
FauNDI	CATATG	2 cut(s)	775, 1134
FokI	GGATG	3 cut(s)	170, 1115, 1175
FriOI	GRGCYC	2 cut(s)	252, 377
FspBI	CTAG	3 cut(s)	5, 489, 974
FspI	TGCGCA	1 cut(s)	477
GlaI	GCGC	2 cut(s)	477, 1331
GsaI	CCCAGC	4 cut(s)	211, 248, 694, 719
GsuI	CTGGAG	2 cut(s)	1206, 1310
HaeII	RGCGCY	1 cut(s)	1333
HaeIII	GGCC	5 cut(s)	177, 687, 708, 741, 863
HapII	CCGG	6 cut(s)	258, 332, 355, 370, 411, 633
HgaI	GACGC	3 cut(s)	158, 379, 608
HhaI	GCGC	2 cut(s)	478, 1332
Hin1I	GRCGYC	3 cut(s)	126, 150, 390
Hin1II	CATG	6 cut(s)	164, 803, 1003, 1067, 1111, 1191
Hin6I	GCGC	2 cut(s)	476, 1330
HinP1I	GCGC	2 cut(s)	476, 1330
HincII	GTYRAC	1 cut(s)	997
HindII	GTYRAC	1 cut(s)	997
HindIII	AAGCTT	1 cut(s)	832
HinfI	GANTC	8 cut(s)	68, 80, 422, 636, 666, 1051, 1257, 1277
HpaI	GTTAAC	1 cut(s)	997
HpaII	CCGG	6 cut(s)	258, 332, 355, 370, 411, 633
HphI	GGTGA	3 cut(s)	808, 1332, 1342
Hpy166II	GTNNAC	3 cut(s)	454, 997, 1350
Hpy188I	TCNGA	4 cut(s)	405, 928, 936, 1290
Hpy188III	TCNNGA	5 cut(s)	32, 161, 343, 890, 1254
Hpy8I	GTNNAC	3 cut(s)	454, 997, 1350
Hpy99I	CGWCG	7 cut(s)	128, 131, 149, 152, 176, 232, 624
HpyAV	CCTTC	4 cut(s)	331, 798, 1183, 1272
HpyCH4III	ACNGT	2 cut(s)	222, 932
HpyCH4IV	ACGT	3 cut(s)	126, 395, 549
HpyCH4V	TGCA	8 cut(s)	485, 610, 676, 767, 872, 981, 1198, 1377
HpyF10VI	GCNNNNNNNGC	6 cut(s)	310, 482, 491, 616, 770, 869
HpyF3I	CTNAG	2 cut(s)	528, 858
HpySE526I	ACGT	3 cut(s)	126, 395, 549
Hsp92I	GRCGYC	3 cut(s)	126, 150, 390
Hsp92II	CATG	6 cut(s)	164, 803, 1003, 1067, 1111, 1191
HspAI	GCGC	2 cut(s)	476, 1330
KspAI	GTTAAC	1 cut(s)	997
Kzo9I	GATC	6 cut(s)	7, 154, 318, 499, 892, 1290
LguI	GCTCTTC	2 cut(s)	197, 341
LmnI	GCTCC	8 cut(s)	263, 289, 310, 372, 916, 1214, 1291, 1380
LweI	GCATC	4 cut(s)	885, 1088, 1153, 1256
MaeI	CTAG	3 cut(s)	5, 489, 974
MaeII	ACGT	3 cut(s)	126, 395, 549
MaeIII	GTNAC	4 cut(s)	275, 391, 667, 814
MalI	GATC	6 cut(s)	9, 156, 320, 501, 894, 1292
MbiI	CCGCTC	1 cut(s)	304
MboI	GATC	6 cut(s)	7, 154, 318, 499, 892, 1290
MboII	GAAGA	6 cut(s)	184, 358, 611, 1165, 1225, 1257
MflI	RGATCY	1 cut(s)	7
MhlI	GDGCHC	4 cut(s)	252, 268, 377, 632
MluCI	AATT	4 cut(s)	541, 587, 906, 1018
MlyI	GAGTC	4 cut(s)	62, 74, 675, 1045
MmeI	TCCRAC	2 cut(s)	99, 1140
MseI	TTAA	5 cut(s)	540, 573, 825, 996, 1206
MslI	CAYNNNNRTG	2 cut(s)	681, 1133
MspA1I	CMGCKG	1 cut(s)	690
MspI	CCGG	6 cut(s)	258, 332, 355, 370, 411, 633
MspR9I	CCNGG	6 cut(s)	332, 356, 370, 412, 782, 1029
Mva1269I	GAATGC	1 cut(s)	478
MvaI	CCWGG	2 cut(s)	782, 1029
MvnI	CGCG	3 cut(s)	53, 308, 387
MwoI	GCNNNNNNNGC	6 cut(s)	310, 482, 491, 616, 770, 869
NciI	CCSGG	4 cut(s)	332, 356, 370, 412
NcoI	CCATGG	1 cut(s)	799
NdeI	CATATG	2 cut(s)	775, 1134
NdeII	GATC	6 cut(s)	7, 154, 318, 499, 892, 1290
NlaIII	CATG	6 cut(s)	164, 803, 1003, 1067, 1111, 1191
NlaIV	GGNNCC	2 cut(s)	360, 368
NmuCI	GTSAC	3 cut(s)	391, 667, 814
NsbI	TGCGCA	1 cut(s)	477
OliI	CACNNNNGTG	1 cut(s)	681
PagI	TCATGA	1 cut(s)	160
PaqCI	CACCTGC	1 cut(s)	439
PciSI	GCTCTTC	2 cut(s)	197, 341
PcsI	WCGNNNNNNNCGW	1 cut(s)	150
PctI	GAATGC	1 cut(s)	478
PfeI	GAWTC	4 cut(s)	422, 636, 1257, 1277
PflMI	CCANNNNNTGG	2 cut(s)	240, 715
PfoI	TCCNGGA	3 cut(s)	330, 368, 1027
PleI	GAGTC	4 cut(s)	62, 74, 674, 1045
PpsI	GAGTC	4 cut(s)	62, 74, 674, 1045
PpuMI	RGGWCCY	1 cut(s)	366
PshAI	GACNNNNGTC	1 cut(s)	364
PshBI	ATTAAT	1 cut(s)	540
Psp124BI	GAGCTC	1 cut(s)	377
Psp1406I	AACGTT	1 cut(s)	549
Psp5II	RGGWCCY	1 cut(s)	366
Psp6I	CCWGG	2 cut(s)	780, 1027
PspEI	GGTNACC	1 cut(s)	814
PspFI	CCCAGC	4 cut(s)	207, 244, 690, 715
PspGI	CCWGG	2 cut(s)	780, 1027
PspN4I	GGNNCC	2 cut(s)	360, 368
PspPI	GGNCC	5 cut(s)	222, 359, 366, 408, 706
PspPPI	RGGWCCY	1 cut(s)	366
PstI	CTGCAG	1 cut(s)	487
PstNI	CAGNNNCTG	3 cut(s)	244, 715, 1383
PsuI	RGATCY	1 cut(s)	7
RsaI	GTAC	1 cut(s)	455
RsaNI	GTAC	1 cut(s)	454
RseI	CAYNNNNRTG	2 cut(s)	681, 1133
SacI	GAGCTC	1 cut(s)	377
SapI	GCTCTTC	2 cut(s)	197, 341
SaqAI	TTAA	5 cut(s)	540, 573, 825, 996, 1206
Sau3AI	GATC	6 cut(s)	7, 154, 318, 499, 892, 1290
Sau96I	GGNCC	5 cut(s)	222, 359, 366, 408, 706
SchI	GAGTC	4 cut(s)	62, 74, 675, 1045
ScrFI	CCNGG	6 cut(s)	332, 356, 370, 412, 782, 1029
SduI	GDGCHC	4 cut(s)	252, 268, 377, 632
SfaNI	GCATC	4 cut(s)	885, 1088, 1153, 1256
SfcI	CTRYAG	2 cut(s)	483, 1083
SinI	GGWCC	4 cut(s)	222, 359, 366, 408
SmiMI	CAYNNNNRTG	2 cut(s)	681, 1133
SmlI	CTYRAG	1 cut(s)	952
SmoI	CTYRAG	1 cut(s)	952
Sse9I	AATT	4 cut(s)	541, 587, 906, 1018
SspMI	CTAG	3 cut(s)	5, 489, 974
SstI	GAGCTC	1 cut(s)	377
StyD4I	CCNGG	6 cut(s)	330, 354, 368, 410, 780, 1027
StyI	CCWWGG	3 cut(s)	736, 799, 918
TaaI	ACNGT	2 cut(s)	222, 932
TaiI	ACGT	3 cut(s)	129, 398, 552
TaqI	TCGA	6 cut(s)	111, 171, 227, 502, 653, 879
TaqII	GACCGA	1 cut(s)	376
TasI	AATT	4 cut(s)	541, 587, 906, 1018
TatI	WGTACW	1 cut(s)	453
TauI	GCSGC	9 cut(s)	53, 134, 180, 214, 304, 354, 390, 690, 1244
TfiI	GAWTC	4 cut(s)	422, 636, 1257, 1277
Tru1I	TTAA	5 cut(s)	540, 573, 825, 996, 1206
Tru9I	TTAA	5 cut(s)	540, 573, 825, 996, 1206
TscAI	CASTG	3 cut(s)	245, 478, 1230
TseFI	GTSAC	3 cut(s)	391, 667, 814
Tsp45I	GTSAC	3 cut(s)	391, 667, 814
TspDTI	ATGAA	3 cut(s)	1115, 1124, 1292
TspGWI	ACGGA	1 cut(s)	509
TspRI	CASTG	3 cut(s)	245, 478, 1230
Van91I	CCANNNNNTGG	2 cut(s)	240, 715
VpaK11BI	GGWCC	4 cut(s)	222, 359, 366, 408
VspI	ATTAAT	1 cut(s)	540
XapI	RAATTY	2 cut(s)	587, 1018
XcmI	CCANNNNNNNNNTGG	1 cut(s)	241
XspI	CTAG	3 cut(s)	5, 489, 974
ZraI	GACGTC	1 cut(s)	127

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.