Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0003533

Physical Location & Seq

Genomic Coordinates Forward (+)

7476459 .. 7480436

Gene Structure 3978 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0095700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1902 bp

ATGAAGCCATATCTAGTTTGTGCAACAGTTCTTATTCTCTCATTCCTTTGCCAAACCATAGCTGATCTCAGTTCAGACAAACAAGCCCTTCTCGACTTCATTTCAGTTGTTCCTCATGGCCGAAAAGTTAACTGGGATACTACTATGTCAGTCTGCAATTCTTGGGTTGGCATCAACTGTACCTTGAATGGCACACGTGTGCTTGCTGTTCGACTCCCTGGTGTTGGACTCTATGGTCCAATTCCATCACACACTCTTGGCAAGCTGGATGCTCTCATGATCCTTAGCCTTCACTCAAACCGCCTTAGTGGGAGTCTTCCATCAGATATTTTTGCCCTTCCTTCCTTGCGCTACATATACCTTCACGACAACAATTTTACAGGTAGTATTCCCTCTTCTCTGCCTCCCAACCTCACCGTACTTGATTTGTCTTCCAACTCCCTCACTGGCAGCATTCCAGCCACAATCCAAAATTTAACACATCTCAATGGGCTGAACCTCCAGAACAATTCCCTCAGTGGACCTGTTCCTGATATCAAAACTCCAAGGCTTAAGCATTTGAATTTAAGCTACAACCACCTTAATGGTTCAATTCCTCCTCCCTTTAAAAAATTCCCCACTTCTTCCTTTGAAGGAAACTCGATGTTATGTGGGCCACCACTAAAACAGTGTGCTTCAATCACTCCCTCACCTTCTCCATCCCCTAATCATCAACTACCAGGCTCAGCAGGCCCCTCCAAACCAAAAAAAGGATCTAAGATGAAACTAAGTGTTGGGGCTATCATTGCCATTGCATGTGGTGGTTTTGCAGTGTTGTTTCTCTCAGTTCTAGTAATGGTGCTGTGCTGTTTGAAGAGGAAAACCCGCAAAGATGGTGCTGTAGTGAAAACAAAAGGTGGAAGGAGTGAGCAGCCAAAGGAGGACTTCGGAAGTGGGGTGCAAGAGGCTGAGAAGAACAAACTGGTCTTCTTTGAAGGCAGTTCTTATAATTTTGATCTTGAGGATTTACTAAGAGCTTCGGCTGAAGTGCTAGGAAAGGGGAGTTATGGGACTACTTACAAGGCCATCCTGGAGGAGGGGACAACAGTGGTTGTGAAAAGAATGAAAGAAGTTGTTGTGGGGAAAAGGGAATTTGAACAGCTAATGGAGAATGCCGGGAGGATTAGTCAGCACTCAAATGTTGTTCCTCTTCGTGCTTATTACTACTCCAAAGATGAAAAGCTCCTGGTTTATGACTACATTGCAGCTGGTAGCTTTGCCGCATTATTGCATGGAAACAGGGATAGTGTACATAATGGACCGGACTGGGAAACTAGACTTAAGATTGCCCTTGGAAGTGCAAAAGGTCTTGCTCATATCCACTCGTCTGGTGGAGGGAAATTCATCCATGGCAACATCAAGTCCTCCAACATCCTCATCACCCAGGACCTTAATGGCTGTATCTCAGACTTTGGCCTAACTCCTCTTATGAACTTTGCAACTATACCTTCCAGAAGTGTAGGCTATCGAGCTCCTGAGGTGATTGAAGCTCGAAAATCATTCCAAAAATCTGATGTTTATAGTTTTGGTGTCCTGCTCCTGGAGATGCTCACAGGTAAATCACCAGTCCAGTCACCAGGGCGTGATGATGTTGTGGATCTTCCAAGGTGGGTACAGTCTGTTGTTCGAGAGGAATGGACAGCAGAGGTGTTTGATGTAGAGCTAATGAGGTTTCAAAATATTGAAGAAGAGTTGGTACAGATGCTTCAAATAGCAATGGCATGTGTGCAAACTGTACCGGACCTGAGGCCTACTATGGAGGAAGTTGTTAAGATGATCGAGGATATCAGGCCACCGGATTCTGAGAACCGACCTTCGTCAGACGATAACAAGTCCAAGAGCTCAAATACTCAGACTCCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03018 map03018

Pfam Domains

Protein Families

RRM_1 zf-RING_4

Protein Analysis

633

Amino Acids

69.0

Weight (kDa)

8.58

Isoelectric Point (pI)

42.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	342 - 604	8e-34	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	342 - 605	2.7e-33	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003533)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G09630 AT3G09630 AT5G02870 AT5G02870
fragaria_vesca	FvH4_4g07470 FvH4_6g15170 FvH4_6g15170 FvH4_6g15170
malus_domestica	MD12G1126000.v1.1 MD16G1251600.v1.1
prunus_persica	Prupe.1G078100_v2.0.a1 Prupe.1G078100_v2.0.a1 Prupe.6G242600_v2.0.a1
pyrus_communis	pycom04g10060 pycom12g12420 pycom16g21150
rosa_chinensis	RchiOBHm_Chr3g0468471 RchiOBHm_Chr6g0270851
rosa_laevigata	RLG00000013765 RLG00000024426
rosa_multiflora	Rmu_sc0000642.1_g000029 Rmu_sc0008735.1_g000002 Rmu_sc0008735.1_g000003
rosa_roxburghii	Rroxscaffold_6G00412730 Rroxscaffold_7G00197580
rosa_rugosa	Rorug03G0095700 Rorug06G0056900
rosa_samantha	Rh3AG143500 Rh3BG166000 Rh6AG176200 Rh6BG179400 Rh6CG175600 Rh6DG167900
rosa_wichuraiana	Rw3G013590 Rw6G015010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	987
AasI	GACNNNNNNGTC	1 cut(s)	234
AciI	CCGC	3 cut(s)	301, 865, 1260
AclWI	GGATC	3 cut(s)	274, 760, 1644
AcoI	YGGCCR	1 cut(s)	118
AcsI	RAATTY	5 cut(s)	472, 562, 611, 1130, 1379
AcuI	CTGAAG	1 cut(s)	1044
AcvI	CACGTG	1 cut(s)	197
AfaI	GTAC	6 cut(s)	181, 420, 1290, 1653, 1737, 1776
AfiI	CCNNNNNNNGG	4 cut(s)	224, 749, 1075, 1579
AflII	CTTAAG	2 cut(s)	551, 1319
AflIII	ACRYGT	2 cut(s)	194, 196
AjnI	CCWGG	7 cut(s)	217, 718, 1068, 1224, 1422, 1578, 1615
AleI	CACNNNNGTG	1 cut(s)	197
Alw21I	GWGCWC	2 cut(s)	1513, 1883
AlwI	GGATC	3 cut(s)	274, 760, 1644
AoxI	GGCC	7 cut(s)	118, 653, 730, 1062, 1453, 1787, 1829
ApeKI	GCWGC	3 cut(s)	450, 910, 1244
ApoI	RAATTY	5 cut(s)	472, 562, 611, 1130, 1379
AspLEI	GCGC	1 cut(s)	351
AspS9I	GGNCC	7 cut(s)	236, 521, 653, 731, 1298, 1426, 1780
AsuC2I	CCSGG	1 cut(s)	1156
AsuHPI	GGTGA	6 cut(s)	406, 681, 1411, 1531, 1593, 1605
AvaII	GGWCC	5 cut(s)	236, 521, 1298, 1426, 1780
AxyI	CCTNAGG	2 cut(s)	1515, 1784
BanII	GRGCYC	2 cut(s)	1513, 1883
BarI	GAAGNNNNNNTAC	6 cut(s)	379, 411, 1719, 1728, 1751, 1760
BbrPI	CACGTG	1 cut(s)	197
BbsI	GAAGAC	3 cut(s)	308, 423, 958
Bbv12I	GWGCWC	2 cut(s)	1513, 1883
BbvI	GCAGC	3 cut(s)	462, 922, 1256
BccI	CCATC	5 cut(s)	253, 328, 706, 866, 1073
BciT130I	CCWGG	7 cut(s)	219, 720, 1070, 1226, 1424, 1580, 1617
BciVI	GTATCC	1 cut(s)	130
BcnI	CCSGG	1 cut(s)	1156
BfaI	CTAG	4 cut(s)	14, 830, 1031, 1314
BfmI	CTRYAG	1 cut(s)	879
BfrI	CTTAAG	2 cut(s)	551, 1319
BfuI	GTATCC	1 cut(s)	130
BisI	GCNGC	4 cut(s)	451, 911, 1245, 1260
BlpI	GCTNAGC	1 cut(s)	724
BlsI	GCNGC	4 cut(s)	452, 912, 1246, 1261
Bme1390I	CCNGG	8 cut(s)	219, 720, 1070, 1156, 1226, 1424, 1580, 1617
Bme18I	GGWCC	5 cut(s)	236, 521, 1298, 1426, 1780
BmgT120I	GGNCC	7 cut(s)	236, 521, 653, 731, 1298, 1426, 1780
BmiI	GGNNCC	1 cut(s)	733
BmrFI	CCNGG	8 cut(s)	219, 720, 1070, 1156, 1226, 1424, 1580, 1617
BmrI	ACTGGG	2 cut(s)	142, 1315
BmsI	GCATC	4 cut(s)	180, 259, 1575, 1731
BmuI	ACTGGG	2 cut(s)	142, 1315
BoxI	GACNNNNGTC	1 cut(s)	1855
BpiI	GAAGAC	3 cut(s)	308, 423, 958
BpmI	CTGGAG	3 cut(s)	485, 1091, 1601
Bpu10I	CCTNAGC	1 cut(s)	284
Bpu1102I	GCTNAGC	1 cut(s)	724
BpuEI	CTTGAG	1 cut(s)	1019
BpuMI	CCSGG	1 cut(s)	1156
BsaAI	YACGTR	1 cut(s)	197
BsaJI	CCNNGG	7 cut(s)	217, 545, 1330, 1387, 1422, 1616, 1643
BsaWI	WCCGGW	3 cut(s)	1300, 1777, 1834
BsaXI	ACNNNNNCTCC	3 cut(s)	1150, 1180, 1879
Bsc4I	CCNNNNNNNGG	4 cut(s)	224, 749, 1075, 1579
Bse1I	ACTGG	6 cut(s)	137, 451, 966, 1310, 1604, 1609
Bse21I	CCTNAGG	2 cut(s)	1515, 1784
Bse3DI	GCAATG	4 cut(s)	783, 789, 1239, 1761
BseBI	CCWGG	7 cut(s)	219, 720, 1070, 1226, 1424, 1580, 1617
BseDI	CCNNGG	7 cut(s)	217, 545, 1330, 1387, 1422, 1616, 1643
BseGI	GGATG	5 cut(s)	274, 698, 1065, 1383, 1410
BseLI	CCNNNNNNNGG	4 cut(s)	224, 749, 1075, 1579
BseMI	GCAATG	4 cut(s)	783, 789, 1239, 1761
BseMII	CTCAG	9 cut(s)	82, 529, 738, 837, 939, 1458, 1506, 1775, 1833
BseNI	ACTGG	6 cut(s)	137, 451, 966, 1310, 1604, 1609
BseRI	GAGGAG	3 cut(s)	588, 1088, 1452
BseXI	GCAGC	3 cut(s)	462, 922, 1256
BshFI	GGCC	7 cut(s)	120, 655, 732, 1064, 1455, 1789, 1831
BsiHKAI	GWGCWC	2 cut(s)	1513, 1883
BsiSI	CCGG	4 cut(s)	1155, 1301, 1778, 1835
BslFI	GGGAC	2 cut(s)	1063, 1093
BslI	CCNNNNNNNGG	4 cut(s)	224, 749, 1075, 1579
BsmFI	GGGAC	2 cut(s)	1063, 1093
BsmI	GAATGC	2 cut(s)	453, 1156
BsnI	GGCC	7 cut(s)	120, 655, 732, 1064, 1455, 1789, 1831
Bsp1286I	GDGCHC	2 cut(s)	1513, 1883
Bsp1407I	TGTACA	1 cut(s)	1288
Bsp143I	GATC	6 cut(s)	64, 279, 752, 994, 1636, 1815
Bsp1720I	GCTNAGC	1 cut(s)	724
Bsp19I	CCATGG	1 cut(s)	1387
BspACI	CCGC	3 cut(s)	301, 865, 1260
BspANI	GGCC	7 cut(s)	120, 655, 732, 1064, 1455, 1789, 1831
BspCNI	CTCAG	9 cut(s)	81, 528, 737, 836, 940, 1457, 1507, 1776, 1834
BspHI	TCATGA	1 cut(s)	276
BspLI	GGNNCC	1 cut(s)	733
BspPI	GGATC	3 cut(s)	274, 760, 1644
BspTI	CTTAAG	2 cut(s)	551, 1319
BsrDI	GCAATG	4 cut(s)	783, 789, 1239, 1761
BsrGI	TGTACA	1 cut(s)	1288
BsrI	ACTGG	6 cut(s)	137, 451, 966, 1310, 1604, 1609
BssECI	CCNNGG	7 cut(s)	217, 545, 1330, 1387, 1422, 1616, 1643
BssMI	GATC	6 cut(s)	64, 279, 752, 994, 1636, 1815
BssT1I	CCWWGG	4 cut(s)	545, 1330, 1387, 1643
Bst2UI	CCWGG	7 cut(s)	219, 720, 1070, 1226, 1424, 1580, 1617
Bst4CI	ACNGT	7 cut(s)	28, 179, 418, 669, 1087, 1656, 1774
Bst6I	CTCTTC	4 cut(s)	400, 848, 1194, 1722
BstAFI	CTTAAG	2 cut(s)	551, 1319
BstAUI	TGTACA	1 cut(s)	1288
BstBAI	YACGTR	1 cut(s)	197
BstC8I	GCNNGC	3 cut(s)	204, 263, 730
BstDSI	CCRYGG	1 cut(s)	1387
BstENI	CCTNNNNNAGG	1 cut(s)	1073
BstF5I	GGATG	5 cut(s)	274, 698, 1065, 1383, 1410
BstHHI	GCGC	1 cut(s)	351
BstKTI	GATC	6 cut(s)	67, 282, 755, 997, 1639, 1818
BstMBI	GATC	6 cut(s)	64, 279, 752, 994, 1636, 1815
BstMWI	GCNNNNNNNGC	2 cut(s)	729, 785
BstNI	CCWGG	7 cut(s)	219, 720, 1070, 1226, 1424, 1580, 1617
BstNSI	RCATGY	2 cut(s)	798, 1764
BstPAI	GACNNNNGTC	1 cut(s)	1855
BstSCI	CCNGG	8 cut(s)	217, 718, 1068, 1154, 1224, 1422, 1578, 1615
BstSFI	CTRYAG	1 cut(s)	879
BstV1I	GCAGC	3 cut(s)	462, 922, 1256
BstV2I	GAAGAC	3 cut(s)	308, 423, 958
BstX2I	RGATCY	2 cut(s)	752, 1636
BstXI	CCANNNNNNTGG	2 cut(s)	584, 1367
BstYI	RGATCY	2 cut(s)	752, 1636
Bsu36I	CCTNAGG	2 cut(s)	1515, 1784
BsuI	GTATCC	1 cut(s)	130
BsuRI	GGCC	7 cut(s)	120, 655, 732, 1064, 1455, 1789, 1831
BtgI	CCRYGG	1 cut(s)	1387
BtsCI	GGATG	5 cut(s)	274, 698, 1065, 1383, 1410
BtsI	GCAGTG	1 cut(s)	816
BtsIMutI	CAGTG	5 cut(s)	444, 523, 674, 816, 1092
Cac8I	GCNNGC	3 cut(s)	204, 263, 730
CciI	TCATGA	1 cut(s)	276
CfoI	GCGC	1 cut(s)	351
Cfr13I	GGNCC	7 cut(s)	236, 521, 653, 731, 1298, 1426, 1780
Csp6I	GTAC	6 cut(s)	180, 419, 1289, 1652, 1736, 1775
CviAII	CATG	7 cut(s)	116, 277, 795, 1271, 1388, 1761, 1899
CviQI	GTAC	6 cut(s)	180, 419, 1289, 1652, 1736, 1775
DpnI	GATC	6 cut(s)	66, 281, 754, 996, 1638, 1817
DpnII	GATC	6 cut(s)	64, 279, 752, 994, 1636, 1815
DraI	TTTAAA	1 cut(s)	607
DrdI	GACNNNNNNGTC	1 cut(s)	234
DseDI	GACNNNNNNGTC	1 cut(s)	234
EaeI	YGGCCR	1 cut(s)	118
Eam1104I	CTCTTC	4 cut(s)	400, 848, 1194, 1722
EarI	CTCTTC	4 cut(s)	400, 848, 1194, 1722
Ecl136II	GAGCTC	2 cut(s)	1511, 1881
Eco130I	CCWWGG	4 cut(s)	545, 1330, 1387, 1643
Eco147I	AGGCCT	1 cut(s)	1789
Eco24I	GRGCYC	2 cut(s)	1513, 1883
Eco32I	GATATC	2 cut(s)	535, 1825
Eco47I	GGWCC	5 cut(s)	236, 521, 1298, 1426, 1780
Eco53kI	GAGCTC	2 cut(s)	1511, 1881
Eco57I	CTGAAG	1 cut(s)	1044
Eco72I	CACGTG	1 cut(s)	197
Eco81I	CCTNAGG	2 cut(s)	1515, 1784
EcoICRI	GAGCTC	2 cut(s)	1511, 1881
EcoNI	CCTNNNNNAGG	1 cut(s)	1073
EcoO109I	RGGNCCY	2 cut(s)	731, 1426
EcoRII	CCWGG	7 cut(s)	217, 718, 1068, 1224, 1422, 1578, 1615
EcoRV	GATATC	2 cut(s)	535, 1825
EcoT14I	CCWWGG	4 cut(s)	545, 1330, 1387, 1643
EcoT38I	GRGCYC	2 cut(s)	1513, 1883
ErhI	CCWWGG	4 cut(s)	545, 1330, 1387, 1643
FaeI	CATG	7 cut(s)	119, 280, 798, 1274, 1391, 1764, 1902
FalI	AAGNNNNNCTT	2 cut(s)	908, 940
FaqI	GGGAC	2 cut(s)	1063, 1093
FatI	CATG	7 cut(s)	115, 276, 794, 1270, 1387, 1760, 1898
FauI	CCCGC	1 cut(s)	872
Fnu4HI	GCNGC	4 cut(s)	451, 911, 1245, 1260
FokI	GGATG	5 cut(s)	281, 685, 1052, 1370, 1397
FriOI	GRGCYC	2 cut(s)	1513, 1883
Fsp4HI	GCNGC	4 cut(s)	451, 911, 1245, 1260
FspBI	CTAG	4 cut(s)	14, 830, 1031, 1314
GlaI	GCGC	1 cut(s)	350
GluI	GCNGC	4 cut(s)	451, 911, 1245, 1260
GsuI	CTGGAG	3 cut(s)	485, 1091, 1601
HaeIII	GGCC	7 cut(s)	120, 655, 732, 1064, 1455, 1789, 1831
HapII	CCGG	4 cut(s)	1155, 1301, 1778, 1835
HhaI	GCGC	1 cut(s)	351
Hin1II	CATG	7 cut(s)	119, 280, 798, 1274, 1391, 1764, 1902
Hin6I	GCGC	1 cut(s)	349
HinP1I	GCGC	1 cut(s)	349
HincII	GTYRAC	1 cut(s)	130
HindII	GTYRAC	1 cut(s)	130
HinfI	GANTC	5 cut(s)	213, 228, 313, 1838, 1894
HpaI	GTTAAC	1 cut(s)	130
HpaII	CCGG	4 cut(s)	1155, 1301, 1778, 1835
HphI	GGTGA	6 cut(s)	406, 681, 1411, 1531, 1593, 1605
Hpy166II	GTNNAC	3 cut(s)	130, 521, 1289
Hpy188I	TCNGA	8 cut(s)	76, 325, 929, 1447, 1552, 1843, 1861, 1893
Hpy188III	TCNNGA	9 cut(s)	92, 277, 365, 502, 530, 998, 1491, 1514, 1667
Hpy8I	GTNNAC	3 cut(s)	130, 521, 1289
HpyCH4III	ACNGT	7 cut(s)	28, 179, 418, 669, 1087, 1656, 1774
HpyCH4IV	ACGT	1 cut(s)	196
HpyF10VI	GCNNNNNNNGC	2 cut(s)	729, 785
HpySE526I	ACGT	1 cut(s)	196
Hsp92II	CATG	7 cut(s)	119, 280, 798, 1274, 1391, 1764, 1902
HspAI	GCGC	1 cut(s)	349
KspAI	GTTAAC	1 cut(s)	130
Kzo9I	GATC	6 cut(s)	64, 279, 752, 994, 1636, 1815
LmnI	GCTCC	3 cut(s)	1227, 1516, 1581
Lsp1109I	GCAGC	3 cut(s)	462, 922, 1256
LweI	GCATC	4 cut(s)	180, 259, 1575, 1731
MaeI	CTAG	4 cut(s)	14, 830, 1031, 1314
MaeII	ACGT	1 cut(s)	196
MaeIII	GTNAC	1 cut(s)	1611
MalI	GATC	6 cut(s)	66, 281, 754, 996, 1638, 1817
MboI	GATC	6 cut(s)	64, 279, 752, 994, 1636, 1815
MflI	RGATCY	2 cut(s)	752, 1636
MhlI	GDGCHC	2 cut(s)	1513, 1883
MlyI	GAGTC	4 cut(s)	207, 222, 322, 1888
MmeI	TCCRAC	3 cut(s)	205, 459, 1431
MseI	TTAA	9 cut(s)	129, 476, 552, 566, 582, 606, 1320, 1431, 1809
MslI	CAYNNNNRTG	4 cut(s)	197, 486, 582, 1176
MspA1I	CMGCKG	1 cut(s)	1247
MspCI	CTTAAG	2 cut(s)	551, 1319
MspI	CCGG	4 cut(s)	1155, 1301, 1778, 1835
MspR9I	CCNGG	8 cut(s)	219, 720, 1070, 1156, 1226, 1424, 1580, 1617
Mva1269I	GAATGC	2 cut(s)	453, 1156
MvaI	CCWGG	7 cut(s)	219, 720, 1070, 1226, 1424, 1580, 1617
MwoI	GCNNNNNNNGC	2 cut(s)	729, 785
NciI	CCSGG	1 cut(s)	1156
NcoI	CCATGG	1 cut(s)	1387
NdeII	GATC	6 cut(s)	64, 279, 752, 994, 1636, 1815
NlaIII	CATG	7 cut(s)	119, 280, 798, 1274, 1391, 1764, 1902
NlaIV	GGNNCC	1 cut(s)	733
NmuCI	GTSAC	1 cut(s)	1611
NspI	RCATGY	2 cut(s)	798, 1764
OliI	CACNNNNGTG	1 cut(s)	197
PagI	TCATGA	1 cut(s)	276
PceI	AGGCCT	1 cut(s)	1789
PctI	GAATGC	2 cut(s)	453, 1156
PfeI	GAWTC	1 cut(s)	1838
PfoI	TCCNGGA	2 cut(s)	1068, 1578
PkrI	GCNGC	4 cut(s)	452, 912, 1246, 1261
PleI	GAGTC	4 cut(s)	207, 222, 321, 1888
PmaCI	CACGTG	1 cut(s)	197
PmlI	CACGTG	1 cut(s)	197
PpsI	GAGTC	4 cut(s)	207, 222, 321, 1888
Ppu21I	YACGTR	1 cut(s)	197
PpuMI	RGGWCCY	1 cut(s)	1426
PshAI	GACNNNNGTC	1 cut(s)	1855
PsiI	TTATAA	1 cut(s)	987
Psp124BI	GAGCTC	2 cut(s)	1513, 1883
Psp5II	RGGWCCY	1 cut(s)	1426
Psp6I	CCWGG	7 cut(s)	217, 718, 1068, 1224, 1422, 1578, 1615
PspCI	CACGTG	1 cut(s)	197
PspGI	CCWGG	7 cut(s)	217, 718, 1068, 1224, 1422, 1578, 1615
PspN4I	GGNNCC	1 cut(s)	733
PspPI	GGNCC	7 cut(s)	236, 521, 653, 731, 1298, 1426, 1780
PspPPI	RGGWCCY	1 cut(s)	1426
PsuI	RGATCY	2 cut(s)	752, 1636
PvuII	CAGCTG	1 cut(s)	1247
RsaI	GTAC	6 cut(s)	181, 420, 1290, 1653, 1737, 1776
RsaNI	GTAC	6 cut(s)	180, 419, 1289, 1652, 1736, 1775
RseI	CAYNNNNRTG	4 cut(s)	197, 486, 582, 1176
SacI	GAGCTC	2 cut(s)	1513, 1883
SaqAI	TTAA	9 cut(s)	129, 476, 552, 566, 582, 606, 1320, 1431, 1809
SatI	GCNGC	4 cut(s)	451, 911, 1245, 1260
Sau3AI	GATC	6 cut(s)	64, 279, 752, 994, 1636, 1815
Sau96I	GGNCC	7 cut(s)	236, 521, 653, 731, 1298, 1426, 1780
SchI	GAGTC	4 cut(s)	207, 222, 322, 1888
ScrFI	CCNGG	8 cut(s)	219, 720, 1070, 1156, 1226, 1424, 1580, 1617
SduI	GDGCHC	2 cut(s)	1513, 1883
SfaNI	GCATC	4 cut(s)	180, 259, 1575, 1731
SfcI	CTRYAG	1 cut(s)	879
SinI	GGWCC	5 cut(s)	236, 521, 1298, 1426, 1780
SmiMI	CAYNNNNRTG	4 cut(s)	197, 486, 582, 1176
SmlI	CTYRAG	3 cut(s)	551, 998, 1319
SmoI	CTYRAG	3 cut(s)	551, 998, 1319
SseBI	AGGCCT	1 cut(s)	1789
SsiI	CCGC	3 cut(s)	301, 865, 1260
SspI	AATATT	1 cut(s)	1720
SspMI	CTAG	4 cut(s)	14, 830, 1031, 1314
SstI	GAGCTC	2 cut(s)	1513, 1883
StuI	AGGCCT	1 cut(s)	1789
StyD4I	CCNGG	8 cut(s)	217, 718, 1068, 1154, 1224, 1422, 1578, 1615
StyI	CCWWGG	4 cut(s)	545, 1330, 1387, 1643
TaaI	ACNGT	7 cut(s)	28, 179, 418, 669, 1087, 1656, 1774
TaiI	ACGT	1 cut(s)	199
TaqI	TCGA	7 cut(s)	93, 211, 641, 1507, 1531, 1666, 1818
TatI	WGTACW	1 cut(s)	1288
TauI	GCSGC	1 cut(s)	1262
TfiI	GAWTC	1 cut(s)	1838
Tru1I	TTAA	9 cut(s)	129, 476, 552, 566, 582, 606, 1320, 1431, 1809
Tru9I	TTAA	9 cut(s)	129, 476, 552, 566, 582, 606, 1320, 1431, 1809
TscAI	CASTG	5 cut(s)	451, 523, 674, 816, 1092
TseFI	GTSAC	1 cut(s)	1611
TseI	GCWGC	3 cut(s)	450, 910, 1244
Tsp45I	GTSAC	1 cut(s)	1611
TspDTI	ATGAA	7 cut(s)	17, 88, 776, 1118, 1230, 1372, 1484
TspRI	CASTG	5 cut(s)	451, 523, 674, 816, 1092
Vha464I	CTTAAG	2 cut(s)	551, 1319
VpaK11BI	GGWCC	5 cut(s)	236, 521, 1298, 1426, 1780
XagI	CCTNNNNNAGG	1 cut(s)	1073
XapI	RAATTY	5 cut(s)	472, 562, 611, 1130, 1379
XceI	RCATGY	2 cut(s)	798, 1764
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1367, 1430
XspI	CTAG	4 cut(s)	14, 830, 1031, 1314

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.