60S ribosomal protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G09630 AT3G09630 AT5G02870 AT5G02870 |
| fragaria_vesca | FvH4_4g07470 FvH4_6g15170 FvH4_6g15170 FvH4_6g15170 |
| malus_domestica | MD12G1126000.v1.1 MD16G1251600.v1.1 |
| prunus_persica | Prupe.1G078100_v2.0.a1 Prupe.1G078100_v2.0.a1 Prupe.6G242600_v2.0.a1 |
| pyrus_communis | pycom04g10060 pycom12g12420 pycom16g21150 |
| rosa_chinensis | RchiOBHm_Chr3g0468471 RchiOBHm_Chr6g0270851 |
| rosa_laevigata | RLG00000013765 RLG00000024426 |
| rosa_multiflora | Rmu_sc0000642.1_g000029 Rmu_sc0008735.1_g000002 Rmu_sc0008735.1_g000003 |
| rosa_roxburghii | Rroxscaffold_6G00412730 Rroxscaffold_7G00197580 |
| rosa_rugosa | Rorug03G0095700 Rorug06G0056900 |
| rosa_samantha | Rh3AG143500 Rh3BG166000 Rh6AG176200 Rh6BG179400 Rh6CG175600 Rh6DG167900 |
| rosa_wichuraiana | Rw3G013590 Rw6G015010 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 96 |
| AccB1I | GGYRCC | 3 cut(s) | 103, 339, 348 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 43, 336 |
| AccII | CGCG | 1 cut(s) | 1022 |
| AciI | CCGC | 7 cut(s) | 6, 9, 12, 204, 343, 486, 1020 |
| AclWI | GGATC | 1 cut(s) | 667 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AcuI | CTGAAG | 2 cut(s) | 675, 1065 |
| AcyI | GRCGYC | 3 cut(s) | 93, 104, 340 |
| AfaI | GTAC | 3 cut(s) | 84, 265, 1148 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 43, 213, 260, 336, 593, 1026, 1089 |
| AflII | CTTAAG | 1 cut(s) | 959 |
| AflIII | ACRYGT | 2 cut(s) | 54, 297 |
| AgsI | TTSAA | 5 cut(s) | 529, 733, 976, 997, 1003 |
| AjiI | CACGTC | 1 cut(s) | 227 |
| AjnI | CCWGG | 5 cut(s) | 212, 586, 691, 742, 887 |
| AleI | CACNNNNGTG | 1 cut(s) | 354 |
| AluBI | AGCT | 9 cut(s) | 284, 395, 494, 512, 703, 736, 796, 1043, 1078 |
| AluI | AGCT | 9 cut(s) | 284, 395, 494, 512, 703, 736, 796, 1043, 1078 |
| Alw26I | GTCTC | 2 cut(s) | 240, 394 |
| AlwI | GGATC | 1 cut(s) | 667 |
| AoxI | GGCC | 2 cut(s) | 3, 186 |
| ApeKI | GCWGC | 5 cut(s) | 14, 284, 401, 512, 1130 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1016, 1048 |
| AspLEI | GCGC | 3 cut(s) | 106, 342, 421 |
| AspS9I | GGNCC | 2 cut(s) | 632, 774 |
| AsuC2I | CCSGG | 1 cut(s) | 255 |
| AsuHPI | GGTGA | 7 cut(s) | 22, 62, 185, 260, 743, 883, 1186 |
| AsuNHI | GCTAGC | 1 cut(s) | 1211 |
| AvaII | GGWCC | 2 cut(s) | 632, 774 |
| BanI | GGYRCC | 3 cut(s) | 103, 339, 348 |
| BauI | CACGAG | 3 cut(s) | 246, 432, 858 |
| BbsI | GAAGAC | 1 cut(s) | 509 |
| BbvCI | CCTCAGC | 1 cut(s) | 508 |
| BbvI | GCAGC | 4 cut(s) | 271, 388, 499, 1142 |
| BccI | CCATC | 5 cut(s) | 41, 41, 421, 835, 862 |
| BceAI | ACGGC | 4 cut(s) | 117, 144, 158, 215 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1122, 1156 |
| BciT130I | CCWGG | 5 cut(s) | 214, 588, 693, 744, 889 |
| BciVI | GTATCC | 1 cut(s) | 251 |
| BcnI | CCSGG | 1 cut(s) | 255 |
| BcoDI | GTCTC | 2 cut(s) | 240, 394 |
| BfaI | CTAG | 2 cut(s) | 624, 1212 |
| BfoI | RGCGCY | 2 cut(s) | 107, 343 |
| BfrI | CTTAAG | 1 cut(s) | 959 |
| BfuI | GTATCC | 1 cut(s) | 251 |
| BglII | AGATCT | 1 cut(s) | 333 |
| BisI | GCNGC | 9 cut(s) | 6, 9, 12, 15, 285, 343, 402, 513, 1131 |
| BlsI | GCNGC | 9 cut(s) | 7, 10, 13, 16, 286, 344, 403, 514, 1132 |
| Bme1390I | CCNGG | 6 cut(s) | 214, 255, 588, 693, 744, 889 |
| Bme18I | GGWCC | 2 cut(s) | 632, 774 |
| BmgBI | CACGTC | 1 cut(s) | 227 |
| BmgT120I | GGNCC | 2 cut(s) | 632, 774 |
| BmiI | GGNNCC | 5 cut(s) | 105, 220, 341, 350, 608 |
| BmrFI | CCNGG | 6 cut(s) | 214, 255, 588, 693, 744, 889 |
| BmsI | GCATC | 3 cut(s) | 453, 541, 931 |
| BmtI | GCTAGC | 1 cut(s) | 1215 |
| BpiI | GAAGAC | 1 cut(s) | 509 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 491, 523 |
| Bpu10I | CCTNAGC | 1 cut(s) | 508 |
| BpuEI | CTTGAG | 1 cut(s) | 818 |
| BpuMI | CCSGG | 1 cut(s) | 255 |
| BsaHI | GRCGYC | 3 cut(s) | 93, 104, 340 |
| BsaJI | CCNNGG | 4 cut(s) | 42, 213, 754, 1104 |
| BsaWI | WCCGGW | 1 cut(s) | 221 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 185, 215, 1100, 1130 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 43, 213, 260, 336, 593, 1026, 1089 |
| Bse118I | RCCGGY | 1 cut(s) | 188 |
| Bse1I | ACTGG | 2 cut(s) | 107, 1216 |
| BseBI | CCWGG | 5 cut(s) | 214, 588, 693, 744, 889 |
| BseDI | CCNNGG | 4 cut(s) | 42, 213, 754, 1104 |
| BseGI | GGATG | 4 cut(s) | 33, 52, 946, 1035 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 43, 213, 260, 336, 593, 1026, 1089 |
| BseMII | CTCAG | 4 cut(s) | 405, 450, 522, 546 |
| BseNI | ACTGG | 2 cut(s) | 107, 1216 |
| BseRI | GAGGAG | 1 cut(s) | 1124 |
| BseXI | GCAGC | 4 cut(s) | 271, 388, 499, 1142 |
| Bsh1236I | CGCG | 1 cut(s) | 1022 |
| BshFI | GGCC | 2 cut(s) | 5, 188 |
| BshNI | GGYRCC | 3 cut(s) | 103, 339, 348 |
| BsiSI | CCGG | 3 cut(s) | 189, 222, 255 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 43, 213, 260, 336, 593, 1026, 1089 |
| BsmAI | GTCTC | 2 cut(s) | 240, 394 |
| BsmBI | CGTCTC | 1 cut(s) | 394 |
| BsmI | GAATGC | 1 cut(s) | 880 |
| BsnI | GGCC | 2 cut(s) | 5, 188 |
| BspACI | CCGC | 7 cut(s) | 6, 9, 12, 204, 343, 486, 1020 |
| BspANI | GGCC | 2 cut(s) | 5, 188 |
| BspCNI | CTCAG | 4 cut(s) | 404, 451, 521, 547 |
| BspFNI | CGCG | 1 cut(s) | 1022 |
| BspHI | TCATGA | 1 cut(s) | 96 |
| BspLI | GGNNCC | 5 cut(s) | 105, 220, 341, 350, 608 |
| BspOI | GCTAGC | 1 cut(s) | 1215 |
| BspPI | GGATC | 1 cut(s) | 667 |
| BspT107I | GGYRCC | 3 cut(s) | 103, 339, 348 |
| BspTI | CTTAAG | 1 cut(s) | 959 |
| BsrFI | RCCGGY | 1 cut(s) | 188 |
| BsrI | ACTGG | 2 cut(s) | 107, 1216 |
| BssAI | RCCGGY | 1 cut(s) | 188 |
| BssECI | CCNNGG | 4 cut(s) | 42, 213, 754, 1104 |
| BssNI | GRCGYC | 3 cut(s) | 93, 104, 340 |
| BssSI | CACGAG | 3 cut(s) | 246, 432, 858 |
| BssT1I | CCWWGG | 3 cut(s) | 42, 754, 1104 |
| Bst2BI | CACGAG | 3 cut(s) | 246, 432, 858 |
| Bst2UI | CCWGG | 5 cut(s) | 214, 588, 693, 744, 889 |
| Bst4CI | ACNGT | 7 cut(s) | 79, 272, 353, 611, 1038, 1099, 1169 |
| Bst6I | CTCTTC | 3 cut(s) | 941, 1019, 1082 |
| BstACI | GRCGYC | 3 cut(s) | 93, 104, 340 |
| BstAFI | CTTAAG | 1 cut(s) | 959 |
| BstC8I | GCNNGC | 5 cut(s) | 347, 738, 1080, 1135, 1213 |
| BstDEI | CTNAG | 7 cut(s) | 391, 459, 508, 555, 663, 1014, 1065 |
| BstEII | GGTNACC | 2 cut(s) | 191, 749 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 591 |
| BstF5I | GGATG | 4 cut(s) | 33, 52, 946, 1035 |
| BstFNI | CGCG | 1 cut(s) | 1022 |
| BstH2I | RGCGCY | 2 cut(s) | 107, 343 |
| BstHHI | GCGC | 3 cut(s) | 106, 342, 421 |
| BstMAI | GTCTC | 2 cut(s) | 240, 394 |
| BstNI | CCWGG | 5 cut(s) | 214, 588, 693, 744, 889 |
| BstNSI | RCATGY | 2 cut(s) | 58, 301 |
| BstPI | GGTNACC | 2 cut(s) | 191, 749 |
| BstSCI | CCNGG | 6 cut(s) | 212, 253, 586, 691, 742, 887 |
| BstUI | CGCG | 1 cut(s) | 1022 |
| BstV1I | GCAGC | 4 cut(s) | 271, 388, 499, 1142 |
| BstV2I | GAAGAC | 1 cut(s) | 509 |
| BstX2I | RGATCY | 2 cut(s) | 333, 659 |
| BstYI | RGATCY | 2 cut(s) | 333, 659 |
| BsuI | GTATCC | 1 cut(s) | 251 |
| BsuRI | GGCC | 2 cut(s) | 5, 188 |
| BtrI | CACGTC | 1 cut(s) | 227 |
| BtsCI | GGATG | 4 cut(s) | 33, 52, 946, 1035 |
| BtsIMutI | CAGTG | 2 cut(s) | 1034, 1174 |
| Cac8I | GCNNGC | 5 cut(s) | 347, 738, 1080, 1135, 1213 |
| CciI | TCATGA | 1 cut(s) | 96 |
| CfoI | GCGC | 3 cut(s) | 106, 342, 421 |
| Cfr10I | RCCGGY | 1 cut(s) | 188 |
| Cfr13I | GGNCC | 2 cut(s) | 632, 774 |
| CseI | GACGC | 1 cut(s) | 365 |
| Csp6I | GTAC | 3 cut(s) | 83, 264, 1147 |
| CviAII | CATG | 5 cut(s) | 55, 97, 298, 370, 710 |
| CviQI | GTAC | 3 cut(s) | 83, 264, 1147 |
| DdeI | CTNAG | 7 cut(s) | 391, 459, 508, 555, 663, 1014, 1065 |
| DinI | GGCGCC | 2 cut(s) | 105, 341 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| Eam1104I | CTCTTC | 3 cut(s) | 941, 1019, 1082 |
| EarI | CTCTTC | 3 cut(s) | 941, 1019, 1082 |
| EciI | GGCGGA | 2 cut(s) | 193, 475 |
| Eco130I | CCWWGG | 3 cut(s) | 42, 754, 1104 |
| Eco47I | GGWCC | 2 cut(s) | 632, 774 |
| Eco57I | CTGAAG | 2 cut(s) | 675, 1065 |
| Eco91I | GGTNACC | 2 cut(s) | 191, 749 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 591 |
| EcoO109I | RGGNCCY | 1 cut(s) | 632 |
| EcoO65I | GGTNACC | 2 cut(s) | 191, 749 |
| EcoRII | CCWGG | 5 cut(s) | 212, 586, 691, 742, 887 |
| EcoT14I | CCWWGG | 3 cut(s) | 42, 754, 1104 |
| EgeI | GGCGCC | 2 cut(s) | 105, 341 |
| EheI | GGCGCC | 2 cut(s) | 105, 341 |
| ErhI | CCWWGG | 3 cut(s) | 42, 754, 1104 |
| Esp3I | CGTCTC | 1 cut(s) | 394 |
| FaeI | CATG | 5 cut(s) | 58, 100, 301, 373, 713 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 770, 802 |
| FatI | CATG | 5 cut(s) | 54, 96, 297, 369, 709 |
| Fnu4HI | GCNGC | 9 cut(s) | 6, 9, 12, 15, 285, 343, 402, 513, 1131 |
| FokI | GGATG | 4 cut(s) | 20, 59, 953, 1042 |
| Fsp4HI | GCNGC | 9 cut(s) | 6, 9, 12, 15, 285, 343, 402, 513, 1131 |
| FspBI | CTAG | 2 cut(s) | 624, 1212 |
| GlaI | GCGC | 3 cut(s) | 105, 341, 420 |
| GluI | GCNGC | 9 cut(s) | 6, 9, 12, 15, 285, 343, 402, 513, 1131 |
| HaeII | RGCGCY | 2 cut(s) | 107, 343 |
| HaeIII | GGCC | 2 cut(s) | 5, 188 |
| HapII | CCGG | 3 cut(s) | 189, 222, 255 |
| HgaI | GACGC | 1 cut(s) | 365 |
| HhaI | GCGC | 3 cut(s) | 106, 342, 421 |
| Hin1I | GRCGYC | 3 cut(s) | 93, 104, 340 |
| Hin1II | CATG | 5 cut(s) | 58, 100, 301, 373, 713 |
| Hin6I | GCGC | 3 cut(s) | 104, 340, 419 |
| HinP1I | GCGC | 3 cut(s) | 104, 340, 419 |
| HincII | GTYRAC | 2 cut(s) | 127, 367 |
| HindII | GTYRAC | 2 cut(s) | 127, 367 |
| HindIII | AAGCTT | 2 cut(s) | 734, 794 |
| HinfI | GANTC | 9 cut(s) | 209, 482, 579, 800, 910, 925, 967, 979, 1003 |
| HpaI | GTTAAC | 1 cut(s) | 127 |
| HpaII | CCGG | 3 cut(s) | 189, 222, 255 |
| HphI | GGTGA | 7 cut(s) | 22, 62, 185, 260, 743, 883, 1186 |
| Hpy166II | GTNNAC | 4 cut(s) | 60, 127, 136, 367 |
| Hpy188I | TCNGA | 5 cut(s) | 832, 904, 915, 930, 1165 |
| Hpy188III | TCNNGA | 6 cut(s) | 89, 97, 448, 458, 772, 934 |
| Hpy8I | GTNNAC | 4 cut(s) | 60, 127, 136, 367 |
| Hpy99I | CGWCG | 4 cut(s) | 83, 95, 357, 615 |
| HpyAV | CCTTC | 7 cut(s) | 178, 553, 650, 698, 835, 931, 1063 |
| HpyCH4III | ACNGT | 7 cut(s) | 79, 272, 353, 611, 1038, 1099, 1169 |
| HpyCH4IV | ACGT | 2 cut(s) | 93, 226 |
| HpyCH4V | TGCA | 2 cut(s) | 404, 863 |
| HpyF3I | CTNAG | 7 cut(s) | 391, 459, 508, 555, 663, 1014, 1065 |
| HpySE526I | ACGT | 2 cut(s) | 93, 226 |
| Hsp92I | GRCGYC | 3 cut(s) | 93, 104, 340 |
| Hsp92II | CATG | 5 cut(s) | 58, 100, 301, 373, 713 |
| HspAI | GCGC | 3 cut(s) | 104, 340, 419 |
| KasI | GGCGCC | 2 cut(s) | 103, 339 |
| KspAI | GTTAAC | 1 cut(s) | 127 |
| LmnI | GCTCC | 2 cut(s) | 328, 745 |
| Lsp1109I | GCAGC | 4 cut(s) | 271, 388, 499, 1142 |
| LweI | GCATC | 3 cut(s) | 453, 541, 931 |
| MaeI | CTAG | 2 cut(s) | 624, 1212 |
| MaeII | ACGT | 2 cut(s) | 93, 226 |
| MboII | GAAGA | 9 cut(s) | 193, 514, 847, 850, 958, 976, 988, 1036, 1099 |
| MflI | RGATCY | 2 cut(s) | 333, 659 |
| MluCI | AATT | 2 cut(s) | 724, 898 |
| Mly113I | GGCGCC | 2 cut(s) | 104, 340 |
| MlyI | GAGTC | 3 cut(s) | 218, 476, 809 |
| MmeI | TCCRAC | 3 cut(s) | 174, 350, 1188 |
| MseI | TTAA | 5 cut(s) | 126, 672, 723, 960, 1059 |
| MslI | CAYNNNNRTG | 1 cut(s) | 354 |
| MspA1I | CMGCKG | 3 cut(s) | 14, 345, 512 |
| MspCI | CTTAAG | 1 cut(s) | 959 |
| MspI | CCGG | 3 cut(s) | 189, 222, 255 |
| MspR9I | CCNGG | 6 cut(s) | 214, 255, 588, 693, 744, 889 |
| Mva1269I | GAATGC | 1 cut(s) | 880 |
| MvaI | CCWGG | 5 cut(s) | 214, 588, 693, 744, 889 |
| MvnI | CGCG | 1 cut(s) | 1022 |
| NarI | GGCGCC | 2 cut(s) | 104, 340 |
| NciI | CCSGG | 1 cut(s) | 255 |
| NheI | GCTAGC | 1 cut(s) | 1211 |
| NlaIII | CATG | 5 cut(s) | 58, 100, 301, 373, 713 |
| NlaIV | GGNNCC | 5 cut(s) | 105, 220, 341, 350, 608 |
| NmeAIII | GCCGAG | 1 cut(s) | 232 |
| NmuCI | GTSAC | 8 cut(s) | 28, 50, 191, 377, 437, 479, 749, 1032 |
| NspI | RCATGY | 2 cut(s) | 58, 301 |
| OliI | CACNNNNGTG | 1 cut(s) | 354 |
| PagI | TCATGA | 1 cut(s) | 96 |
| PciI | ACATGT | 2 cut(s) | 54, 297 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 87, 129, 244, 310 |
| PctI | GAATGC | 1 cut(s) | 880 |
| PfeI | GAWTC | 6 cut(s) | 579, 910, 925, 967, 979, 1003 |
| PflFI | GACNNNGTC | 1 cut(s) | 778 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 43, 336 |
| PkrI | GCNGC | 9 cut(s) | 7, 10, 13, 16, 286, 344, 403, 514, 1132 |
| PleI | GAGTC | 3 cut(s) | 217, 476, 808 |
| PluTI | GGCGCC | 2 cut(s) | 107, 343 |
| PpsI | GAGTC | 3 cut(s) | 217, 476, 808 |
| PpuMI | RGGWCCY | 1 cut(s) | 632 |
| PscI | ACATGT | 2 cut(s) | 54, 297 |
| Psp5II | RGGWCCY | 1 cut(s) | 632 |
| Psp6I | CCWGG | 5 cut(s) | 212, 586, 691, 742, 887 |
| PspEI | GGTNACC | 2 cut(s) | 191, 749 |
| PspGI | CCWGG | 5 cut(s) | 212, 586, 691, 742, 887 |
| PspN4I | GGNNCC | 5 cut(s) | 105, 220, 341, 350, 608 |
| PspPI | GGNCC | 2 cut(s) | 632, 774 |
| PspPPI | RGGWCCY | 1 cut(s) | 632 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 599, 631 |
| PsuI | RGATCY | 2 cut(s) | 333, 659 |
| PsyI | GACNNNGTC | 1 cut(s) | 778 |
| PvuII | CAGCTG | 1 cut(s) | 512 |
| RsaI | GTAC | 3 cut(s) | 84, 265, 1148 |
| RsaNI | GTAC | 3 cut(s) | 83, 264, 1147 |
| RseI | CAYNNNNRTG | 1 cut(s) | 354 |
| SaqAI | TTAA | 5 cut(s) | 126, 672, 723, 960, 1059 |
| SatI | GCNGC | 9 cut(s) | 6, 9, 12, 15, 285, 343, 402, 513, 1131 |
| Sau96I | GGNCC | 2 cut(s) | 632, 774 |
| SchI | GAGTC | 3 cut(s) | 218, 476, 809 |
| ScrFI | CCNGG | 6 cut(s) | 214, 255, 588, 693, 744, 889 |
| SfaNI | GCATC | 3 cut(s) | 453, 541, 931 |
| SfoI | GGCGCC | 2 cut(s) | 105, 341 |
| SinI | GGWCC | 2 cut(s) | 632, 774 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 354 |
| SmlI | CTYRAG | 2 cut(s) | 797, 959 |
| SmoI | CTYRAG | 2 cut(s) | 797, 959 |
| Sse9I | AATT | 2 cut(s) | 724, 898 |
| SsiI | CCGC | 7 cut(s) | 6, 9, 12, 204, 343, 486, 1020 |
| SspDI | GGCGCC | 2 cut(s) | 103, 339 |
| SspMI | CTAG | 2 cut(s) | 624, 1212 |
| StyD4I | CCNGG | 6 cut(s) | 212, 253, 586, 691, 742, 887 |
| StyI | CCWWGG | 3 cut(s) | 42, 754, 1104 |
| TaaI | ACNGT | 7 cut(s) | 79, 272, 353, 611, 1038, 1099, 1169 |
| TaiI | ACGT | 2 cut(s) | 96, 229 |
| TaqI | TCGA | 3 cut(s) | 112, 179, 447 |
| TasI | AATT | 2 cut(s) | 724, 898 |
| TauI | GCSGC | 4 cut(s) | 8, 11, 14, 345 |
| TfiI | GAWTC | 6 cut(s) | 579, 910, 925, 967, 979, 1003 |
| Tru1I | TTAA | 5 cut(s) | 126, 672, 723, 960, 1059 |
| Tru9I | TTAA | 5 cut(s) | 126, 672, 723, 960, 1059 |
| TscAI | CASTG | 2 cut(s) | 1041, 1174 |
| TseFI | GTSAC | 8 cut(s) | 28, 50, 191, 377, 437, 479, 749, 1032 |
| TseI | GCWGC | 5 cut(s) | 14, 284, 401, 512, 1130 |
| Tsp45I | GTSAC | 8 cut(s) | 28, 50, 191, 377, 437, 479, 749, 1032 |
| TspDTI | ATGAA | 1 cut(s) | 386 |
| TspGWI | ACGGA | 1 cut(s) | 572 |
| TspRI | CASTG | 2 cut(s) | 1041, 1174 |
| Tth111I | GACNNNGTC | 1 cut(s) | 778 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 43, 336 |
| Vha464I | CTTAAG | 1 cut(s) | 959 |
| VpaK11BI | GGWCC | 2 cut(s) | 632, 774 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 591 |
| XceI | RCATGY | 2 cut(s) | 58, 301 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 40, 44, 333 |
| XspI | CTAG | 2 cut(s) | 624, 1212 |
| ZraI | GACGTC | 1 cut(s) | 94 |