60S ribosomal Protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G09630 AT3G09630 AT5G02870 AT5G02870 |
| fragaria_vesca | FvH4_4g07470 FvH4_6g15170 FvH4_6g15170 FvH4_6g15170 |
| malus_domestica | MD12G1126000.v1.1 MD16G1251600.v1.1 |
| prunus_persica | Prupe.1G078100_v2.0.a1 Prupe.1G078100_v2.0.a1 Prupe.6G242600_v2.0.a1 |
| pyrus_communis | pycom04g10060 pycom12g12420 pycom16g21150 |
| rosa_chinensis | RchiOBHm_Chr3g0468471 RchiOBHm_Chr6g0270851 |
| rosa_laevigata | RLG00000013765 RLG00000024426 |
| rosa_multiflora | Rmu_sc0000642.1_g000029 Rmu_sc0008735.1_g000002 Rmu_sc0008735.1_g000003 |
| rosa_roxburghii | Rroxscaffold_6G00412730 Rroxscaffold_7G00197580 |
| rosa_rugosa | Rorug03G0095700 Rorug06G0056900 |
| rosa_samantha | Rh3AG143500 Rh3BG166000 Rh6AG176200 Rh6BG179400 Rh6CG175600 Rh6DG167900 |
| rosa_wichuraiana | Rw3G013590 Rw6G015010 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 102 |
| Acc65I | GGTACC | 1 cut(s) | 1152 |
| AccB1I | GGYRCC | 4 cut(s) | 345, 354, 418, 1152 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 49, 342 |
| AccII | CGCG | 4 cut(s) | 25, 329, 441, 518 |
| AclWI | GGATC | 2 cut(s) | 109, 580 |
| AcoI | YGGCCR | 6 cut(s) | 3, 63, 196, 283, 316, 1047 |
| AcuI | CTGAAG | 1 cut(s) | 1001 |
| AcyI | GRCGYC | 2 cut(s) | 99, 346 |
| AdeI | CACNNNGTG | 1 cut(s) | 1206 |
| AfaI | GTAC | 4 cut(s) | 226, 386, 653, 1154 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 49, 117, 219, 266, 267, 342, 599 |
| AflII | CTTAAG | 1 cut(s) | 1001 |
| AflIII | ACRYGT | 1 cut(s) | 303 |
| AgsI | TTSAA | 7 cut(s) | 497, 526, 535, 739, 967, 1009, 1125 |
| AjnI | CCWGG | 6 cut(s) | 30, 218, 285, 474, 592, 697 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 776, 808 |
| AluBI | AGCT | 8 cut(s) | 20, 293, 673, 742, 1028, 1084, 1121, 1139 |
| AluI | AGCT | 8 cut(s) | 20, 293, 673, 742, 1028, 1084, 1121, 1139 |
| Alw26I | GTCTC | 5 cut(s) | 32, 187, 244, 429, 449 |
| AlwI | GGATC | 2 cut(s) | 109, 580 |
| ApeKI | GCWGC | 3 cut(s) | 17, 20, 1136 |
| AsiSI | GCGATCGC | 1 cut(s) | 405 |
| Asp718I | GGTACC | 1 cut(s) | 1152 |
| AspLEI | GCGC | 3 cut(s) | 25, 331, 348 |
| AspS9I | GGNCC | 8 cut(s) | 70, 120, 229, 270, 436, 638, 666, 780 |
| AsuC2I | CCSGG | 3 cut(s) | 261, 278, 750 |
| AsuHPI | GGTGA | 1 cut(s) | 124 |
| AsuII | TTCGAA | 1 cut(s) | 155 |
| AvaII | GGWCC | 3 cut(s) | 70, 270, 780 |
| BaeGI | GKGCMC | 1 cut(s) | 447 |
| BalI | TGGCCA | 2 cut(s) | 65, 285 |
| BanI | GGYRCC | 4 cut(s) | 345, 354, 418, 1152 |
| BanII | GRGCYC | 1 cut(s) | 961 |
| BauI | CACGAG | 2 cut(s) | 252, 674 |
| BbsI | GAAGAC | 1 cut(s) | 515 |
| BbvCI | CCTCAGC | 1 cut(s) | 208 |
| BbvI | GCAGC | 3 cut(s) | 7, 29, 1148 |
| BccI | CCATC | 2 cut(s) | 868, 1136 |
| BceAI | ACGGC | 6 cut(s) | 164, 221, 303, 374, 406, 625 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 746, 780 |
| BciT130I | CCWGG | 6 cut(s) | 32, 220, 287, 476, 594, 699 |
| BciVI | GTATCC | 1 cut(s) | 257 |
| BcnI | CCSGG | 3 cut(s) | 261, 278, 750 |
| BcoDI | GTCTC | 5 cut(s) | 32, 187, 244, 429, 449 |
| BfaI | CTAG | 1 cut(s) | 1029 |
| BfoI | RGCGCY | 1 cut(s) | 349 |
| BfrI | CTTAAG | 1 cut(s) | 1001 |
| BfuI | GTATCC | 1 cut(s) | 257 |
| BglI | GCCNNNNNGGC | 3 cut(s) | 315, 413, 566 |
| BglII | AGATCT | 1 cut(s) | 339 |
| Bme1390I | CCNGG | 9 cut(s) | 32, 220, 261, 278, 287, 476, 594, 699, 750 |
| Bme18I | GGWCC | 3 cut(s) | 70, 270, 780 |
| BmgT120I | GGNCC | 8 cut(s) | 70, 120, 229, 270, 436, 638, 666, 780 |
| BmiI | GGNNCC | 9 cut(s) | 271, 272, 347, 356, 420, 639, 667, 960, 1154 |
| BmrFI | CCNGG | 9 cut(s) | 32, 220, 261, 278, 287, 476, 594, 699, 750 |
| BmrI | ACTGGG | 1 cut(s) | 1216 |
| BmsI | GCATC | 1 cut(s) | 547 |
| BmuI | ACTGGG | 1 cut(s) | 1216 |
| BpiI | GAAGAC | 1 cut(s) | 515 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 497, 529 |
| Bpu10I | CCTNAGC | 1 cut(s) | 208 |
| Bpu14I | TTCGAA | 1 cut(s) | 155 |
| BpuMI | CCSGG | 3 cut(s) | 261, 278, 750 |
| BsaAI | YACGTR | 1 cut(s) | 245 |
| BsaHI | GRCGYC | 2 cut(s) | 99, 346 |
| BsaWI | WCCGGW | 1 cut(s) | 357 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 49, 117, 219, 266, 267, 342, 599 |
| Bse118I | RCCGGY | 1 cut(s) | 194 |
| Bse1I | ACTGG | 2 cut(s) | 43, 1222 |
| BseBI | CCWGG | 6 cut(s) | 32, 220, 287, 476, 594, 699 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 49, 117, 219, 266, 267, 342, 599 |
| BseMII | CTCAG | 4 cut(s) | 222, 651, 828, 1182 |
| BseNI | ACTGG | 2 cut(s) | 43, 1222 |
| BseSI | GKGCMC | 1 cut(s) | 447 |
| BseXI | GCAGC | 3 cut(s) | 7, 29, 1148 |
| Bsh1236I | CGCG | 4 cut(s) | 25, 329, 441, 518 |
| Bsh1285I | CGRYCG | 1 cut(s) | 405 |
| BshNI | GGYRCC | 4 cut(s) | 345, 354, 418, 1152 |
| BsiEI | CGRYCG | 1 cut(s) | 405 |
| BsiSI | CCGG | 6 cut(s) | 118, 195, 261, 277, 358, 750 |
| BslFI | GGGAC | 3 cut(s) | 242, 283, 670 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 49, 117, 219, 266, 267, 342, 599 |
| BsmAI | GTCTC | 5 cut(s) | 32, 187, 244, 429, 449 |
| BsmBI | CGTCTC | 4 cut(s) | 32, 187, 244, 429 |
| BsmFI | GGGAC | 3 cut(s) | 242, 283, 670 |
| Bsp119I | TTCGAA | 1 cut(s) | 155 |
| Bsp1286I | GDGCHC | 2 cut(s) | 447, 961 |
| Bsp143I | GATC | 9 cut(s) | 114, 339, 363, 402, 540, 585, 810, 936, 1164 |
| BspCNI | CTCAG | 4 cut(s) | 221, 652, 829, 1181 |
| BspFNI | CGCG | 4 cut(s) | 25, 329, 441, 518 |
| BspHI | TCATGA | 1 cut(s) | 102 |
| BspLI | GGNNCC | 9 cut(s) | 271, 272, 347, 356, 420, 639, 667, 960, 1154 |
| BspPI | GGATC | 2 cut(s) | 109, 580 |
| BspT104I | TTCGAA | 1 cut(s) | 155 |
| BspT107I | GGYRCC | 4 cut(s) | 345, 354, 418, 1152 |
| BspTI | CTTAAG | 1 cut(s) | 1001 |
| BsrFI | RCCGGY | 1 cut(s) | 194 |
| BsrI | ACTGG | 2 cut(s) | 43, 1222 |
| BssAI | RCCGGY | 1 cut(s) | 194 |
| BssMI | GATC | 9 cut(s) | 114, 339, 363, 402, 540, 585, 810, 936, 1164 |
| BssNI | GRCGYC | 2 cut(s) | 99, 346 |
| BssSI | CACGAG | 2 cut(s) | 252, 674 |
| BssT1I | CCWWGG | 1 cut(s) | 48 |
| Bst2BI | CACGAG | 2 cut(s) | 252, 674 |
| Bst2UI | CCWGG | 6 cut(s) | 32, 220, 287, 476, 594, 699 |
| Bst4CI | ACNGT | 3 cut(s) | 40, 85, 460 |
| Bst6I | CTCTTC | 2 cut(s) | 947, 1088 |
| BstACI | GRCGYC | 2 cut(s) | 99, 346 |
| BstAFI | CTTAAG | 1 cut(s) | 1001 |
| BstBAI | YACGTR | 1 cut(s) | 245 |
| BstBI | TTCGAA | 1 cut(s) | 155 |
| BstC8I | GCNNGC | 8 cut(s) | 170, 196, 283, 353, 439, 443, 744, 1141 |
| BstDEI | CTNAG | 6 cut(s) | 208, 660, 837, 1071, 1110, 1168 |
| BstDSI | CCRYGG | 3 cut(s) | 66, 439, 516 |
| BstFNI | CGCG | 4 cut(s) | 25, 329, 441, 518 |
| BstH2I | RGCGCY | 1 cut(s) | 349 |
| BstHHI | GCGC | 3 cut(s) | 25, 331, 348 |
| BstKTI | GATC | 9 cut(s) | 117, 342, 366, 405, 543, 588, 813, 939, 1167 |
| BstMAI | GTCTC | 5 cut(s) | 32, 187, 244, 429, 449 |
| BstMBI | GATC | 9 cut(s) | 114, 339, 363, 402, 540, 585, 810, 936, 1164 |
| BstMCI | CGRYCG | 1 cut(s) | 405 |
| BstNI | CCWGG | 6 cut(s) | 32, 220, 287, 476, 594, 699 |
| BstNSI | RCATGY | 1 cut(s) | 307 |
| BstSCI | CCNGG | 9 cut(s) | 30, 218, 259, 276, 285, 474, 592, 697, 748 |
| BstSLI | GKGCMC | 1 cut(s) | 447 |
| BstUI | CGCG | 4 cut(s) | 25, 329, 441, 518 |
| BstV1I | GCAGC | 3 cut(s) | 7, 29, 1148 |
| BstV2I | GAAGAC | 1 cut(s) | 515 |
| BstX2I | RGATCY | 1 cut(s) | 339 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 281 |
| BstYI | RGATCY | 1 cut(s) | 339 |
| BsuI | GTATCC | 1 cut(s) | 257 |
| BtgI | CCRYGG | 3 cut(s) | 66, 439, 516 |
| Cac8I | GCNNGC | 8 cut(s) | 170, 196, 283, 353, 439, 443, 744, 1141 |
| CciI | TCATGA | 1 cut(s) | 102 |
| CfoI | GCGC | 3 cut(s) | 25, 331, 348 |
| Cfr10I | RCCGGY | 1 cut(s) | 194 |
| Cfr13I | GGNCC | 8 cut(s) | 70, 120, 229, 270, 436, 638, 666, 780 |
| Cfr42I | CCGCGG | 2 cut(s) | 442, 519 |
| CseI | GACGC | 1 cut(s) | 14 |
| Csp6I | GTAC | 4 cut(s) | 225, 385, 652, 1153 |
| CviAII | CATG | 4 cut(s) | 61, 103, 304, 1149 |
| CviQI | GTAC | 4 cut(s) | 225, 385, 652, 1153 |
| DdeI | CTNAG | 6 cut(s) | 208, 660, 837, 1071, 1110, 1168 |
| DinI | GGCGCC | 1 cut(s) | 347 |
| DpnI | GATC | 9 cut(s) | 116, 341, 365, 404, 542, 587, 812, 938, 1166 |
| DpnII | GATC | 9 cut(s) | 114, 339, 363, 402, 540, 585, 810, 936, 1164 |
| DraIII | CACNNNGTG | 1 cut(s) | 1206 |
| EaeI | YGGCCR | 6 cut(s) | 3, 63, 196, 283, 316, 1047 |
| Eam1104I | CTCTTC | 2 cut(s) | 947, 1088 |
| EarI | CTCTTC | 2 cut(s) | 947, 1088 |
| EciI | GGCGGA | 1 cut(s) | 1070 |
| Eco130I | CCWWGG | 1 cut(s) | 48 |
| Eco147I | AGGCCT | 1 cut(s) | 110 |
| Eco24I | GRGCYC | 1 cut(s) | 961 |
| Eco32I | GATATC | 1 cut(s) | 709 |
| Eco47I | GGWCC | 3 cut(s) | 70, 270, 780 |
| Eco57I | CTGAAG | 1 cut(s) | 1001 |
| EcoO109I | RGGNCCY | 1 cut(s) | 270 |
| EcoRII | CCWGG | 6 cut(s) | 30, 218, 285, 474, 592, 697 |
| EcoRV | GATATC | 1 cut(s) | 709 |
| EcoT14I | CCWWGG | 1 cut(s) | 48 |
| EcoT38I | GRGCYC | 1 cut(s) | 961 |
| EgeI | GGCGCC | 1 cut(s) | 347 |
| EheI | GGCGCC | 1 cut(s) | 347 |
| ErhI | CCWWGG | 1 cut(s) | 48 |
| Esp3I | CGTCTC | 4 cut(s) | 32, 187, 244, 429 |
| FaeI | CATG | 4 cut(s) | 64, 106, 307, 1152 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 776, 808 |
| FaqI | GGGAC | 3 cut(s) | 242, 283, 670 |
| FatI | CATG | 4 cut(s) | 60, 102, 303, 1148 |
| FauI | CCCGC | 4 cut(s) | 173, 260, 434, 446 |
| FriOI | GRGCYC | 1 cut(s) | 961 |
| FseI | GGCCGGCC | 1 cut(s) | 198 |
| FspBI | CTAG | 1 cut(s) | 1029 |
| GlaI | GCGC | 3 cut(s) | 24, 330, 347 |
| HaeII | RGCGCY | 1 cut(s) | 349 |
| HapII | CCGG | 6 cut(s) | 118, 195, 261, 277, 358, 750 |
| HgaI | GACGC | 1 cut(s) | 14 |
| HhaI | GCGC | 3 cut(s) | 25, 331, 348 |
| Hin1I | GRCGYC | 2 cut(s) | 99, 346 |
| Hin1II | CATG | 4 cut(s) | 64, 106, 307, 1152 |
| Hin6I | GCGC | 3 cut(s) | 23, 329, 346 |
| HinP1I | GCGC | 3 cut(s) | 23, 329, 346 |
| HincII | GTYRAC | 1 cut(s) | 373 |
| HindII | GTYRAC | 1 cut(s) | 373 |
| HindIII | AAGCTT | 3 cut(s) | 740, 1082, 1119 |
| HinfI | GANTC | 6 cut(s) | 215, 488, 806, 973, 985, 1009 |
| HpaII | CCGG | 6 cut(s) | 118, 195, 261, 277, 358, 750 |
| HphI | GGTGA | 1 cut(s) | 124 |
| Hpy166II | GTNNAC | 3 cut(s) | 142, 373, 652 |
| Hpy188I | TCNGA | 9 cut(s) | 299, 556, 590, 838, 910, 921, 981, 990, 1171 |
| Hpy188III | TCNNGA | 6 cut(s) | 103, 464, 676, 778, 796, 940 |
| Hpy8I | GTNNAC | 3 cut(s) | 142, 373, 652 |
| Hpy99I | CGWCG | 2 cut(s) | 101, 395 |
| HpyCH4III | ACNGT | 3 cut(s) | 40, 85, 460 |
| HpyCH4IV | ACGT | 3 cut(s) | 99, 244, 369 |
| HpyCH4V | TGCA | 1 cut(s) | 1019 |
| HpyF3I | CTNAG | 6 cut(s) | 208, 660, 837, 1071, 1110, 1168 |
| HpySE526I | ACGT | 3 cut(s) | 99, 244, 369 |
| Hsp92I | GRCGYC | 2 cut(s) | 99, 346 |
| Hsp92II | CATG | 4 cut(s) | 64, 106, 307, 1152 |
| HspAI | GCGC | 3 cut(s) | 23, 329, 346 |
| KasI | GGCGCC | 1 cut(s) | 345 |
| KflI | GGGWCCC | 1 cut(s) | 270 |
| KpnI | GGTACC | 1 cut(s) | 1156 |
| KroI | GCCGGC | 1 cut(s) | 194 |
| KroNI | GCCGGC | 1 cut(s) | 196 |
| KspI | CCGCGG | 2 cut(s) | 442, 519 |
| Kzo9I | GATC | 9 cut(s) | 114, 339, 363, 402, 540, 585, 810, 936, 1164 |
| LmnI | GCTCC | 3 cut(s) | 290, 751, 964 |
| Lsp1109I | GCAGC | 3 cut(s) | 7, 29, 1148 |
| LweI | GCATC | 1 cut(s) | 547 |
| MaeI | CTAG | 1 cut(s) | 1029 |
| MaeII | ACGT | 3 cut(s) | 99, 244, 369 |
| MaeIII | GTNAC | 2 cut(s) | 34, 130 |
| MalI | GATC | 9 cut(s) | 116, 341, 365, 404, 542, 587, 812, 938, 1166 |
| MboI | GATC | 9 cut(s) | 114, 339, 363, 402, 540, 585, 810, 936, 1164 |
| MboII | GAAGA | 9 cut(s) | 169, 373, 520, 853, 856, 883, 964, 994, 1105 |
| MflI | RGATCY | 1 cut(s) | 339 |
| MhlI | GDGCHC | 2 cut(s) | 447, 961 |
| MlsI | TGGCCA | 2 cut(s) | 65, 285 |
| MluCI | AATT | 2 cut(s) | 467, 800 |
| MluNI | TGGCCA | 2 cut(s) | 65, 285 |
| Mly113I | GGCGCC | 1 cut(s) | 346 |
| MlyI | GAGTC | 2 cut(s) | 224, 482 |
| MmeI | TCCRAC | 1 cut(s) | 613 |
| Mox20I | TGGCCA | 2 cut(s) | 65, 285 |
| MroNI | GCCGGC | 1 cut(s) | 194 |
| MscI | TGGCCA | 2 cut(s) | 65, 285 |
| MseI | TTAA | 4 cut(s) | 627, 729, 903, 1002 |
| MslI | CAYNNNNRTG | 1 cut(s) | 716 |
| Msp20I | TGGCCA | 2 cut(s) | 65, 285 |
| MspA1I | CMGCKG | 5 cut(s) | 20, 351, 441, 518, 1139 |
| MspCI | CTTAAG | 1 cut(s) | 1001 |
| MspI | CCGG | 6 cut(s) | 118, 195, 261, 277, 358, 750 |
| MspR9I | CCNGG | 9 cut(s) | 32, 220, 261, 278, 287, 476, 594, 699, 750 |
| MvaI | CCWGG | 6 cut(s) | 32, 220, 287, 476, 594, 699 |
| MvnI | CGCG | 4 cut(s) | 25, 329, 441, 518 |
| NaeI | GCCGGC | 1 cut(s) | 196 |
| NarI | GGCGCC | 1 cut(s) | 346 |
| NciI | CCSGG | 3 cut(s) | 261, 278, 750 |
| NdeII | GATC | 9 cut(s) | 114, 339, 363, 402, 540, 585, 810, 936, 1164 |
| NgoMIV | GCCGGC | 1 cut(s) | 194 |
| NlaIII | CATG | 4 cut(s) | 64, 106, 307, 1152 |
| NlaIV | GGNNCC | 9 cut(s) | 271, 272, 347, 356, 420, 639, 667, 960, 1154 |
| NmeAIII | GCCGAG | 7 cut(s) | 238, 257, 335, 392, 586, 888, 1075 |
| NmuCI | GTSAC | 2 cut(s) | 34, 130 |
| NspI | RCATGY | 1 cut(s) | 307 |
| NspV | TTCGAA | 1 cut(s) | 155 |
| PagI | TCATGA | 1 cut(s) | 102 |
| PceI | AGGCCT | 1 cut(s) | 110 |
| PciI | ACATGT | 1 cut(s) | 303 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 250, 419 |
| PdiI | GCCGGC | 1 cut(s) | 196 |
| PfeI | GAWTC | 4 cut(s) | 806, 973, 985, 1009 |
| PflFI | GACNNNGTC | 2 cut(s) | 128, 784 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 49, 342 |
| Ple19I | CGATCG | 1 cut(s) | 405 |
| PleI | GAGTC | 2 cut(s) | 223, 482 |
| PluTI | GGCGCC | 1 cut(s) | 349 |
| PpsI | GAGTC | 2 cut(s) | 223, 482 |
| Ppu21I | YACGTR | 1 cut(s) | 245 |
| PpuMI | RGGWCCY | 1 cut(s) | 270 |
| PscI | ACATGT | 1 cut(s) | 303 |
| Psp5II | RGGWCCY | 1 cut(s) | 270 |
| Psp6I | CCWGG | 6 cut(s) | 30, 218, 285, 474, 592, 697 |
| PspGI | CCWGG | 6 cut(s) | 30, 218, 285, 474, 592, 697 |
| PspN4I | GGNNCC | 9 cut(s) | 271, 272, 347, 356, 420, 639, 667, 960, 1154 |
| PspPI | GGNCC | 8 cut(s) | 70, 120, 229, 270, 436, 638, 666, 780 |
| PspPPI | RGGWCCY | 1 cut(s) | 270 |
| PsuI | RGATCY | 1 cut(s) | 339 |
| PsyI | GACNNNGTC | 2 cut(s) | 128, 784 |
| PvuI | CGATCG | 1 cut(s) | 405 |
| PvuII | CAGCTG | 2 cut(s) | 20, 1139 |
| RgaI | GCGATCGC | 1 cut(s) | 405 |
| RigI | GGCCGGCC | 1 cut(s) | 198 |
| RsaI | GTAC | 4 cut(s) | 226, 386, 653, 1154 |
| RsaNI | GTAC | 4 cut(s) | 225, 385, 652, 1153 |
| RseI | CAYNNNNRTG | 1 cut(s) | 716 |
| SacII | CCGCGG | 2 cut(s) | 442, 519 |
| SaqAI | TTAA | 4 cut(s) | 627, 729, 903, 1002 |
| Sau3AI | GATC | 9 cut(s) | 114, 339, 363, 402, 540, 585, 810, 936, 1164 |
| Sau96I | GGNCC | 8 cut(s) | 70, 120, 229, 270, 436, 638, 666, 780 |
| SchI | GAGTC | 2 cut(s) | 224, 482 |
| ScrFI | CCNGG | 9 cut(s) | 32, 220, 261, 278, 287, 476, 594, 699, 750 |
| SduI | GDGCHC | 2 cut(s) | 447, 961 |
| SfaAI | GCGATCGC | 1 cut(s) | 405 |
| SfaNI | GCATC | 1 cut(s) | 547 |
| SfoI | GGCGCC | 1 cut(s) | 347 |
| Sfr303I | CCGCGG | 2 cut(s) | 442, 519 |
| SfuI | TTCGAA | 1 cut(s) | 155 |
| SgfI | GCGATCGC | 1 cut(s) | 405 |
| SgrBI | CCGCGG | 2 cut(s) | 442, 519 |
| SinI | GGWCC | 3 cut(s) | 70, 270, 780 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 716 |
| SmlI | CTYRAG | 1 cut(s) | 1001 |
| SmoI | CTYRAG | 1 cut(s) | 1001 |
| Sse9I | AATT | 2 cut(s) | 467, 800 |
| SseBI | AGGCCT | 1 cut(s) | 110 |
| SspDI | GGCGCC | 1 cut(s) | 345 |
| SspI | AATATT | 1 cut(s) | 151 |
| SspMI | CTAG | 1 cut(s) | 1029 |
| StuI | AGGCCT | 1 cut(s) | 110 |
| StyD4I | CCNGG | 9 cut(s) | 30, 218, 259, 276, 285, 474, 592, 697, 748 |
| StyI | CCWWGG | 1 cut(s) | 48 |
| TaaI | ACNGT | 3 cut(s) | 40, 85, 460 |
| TaiI | ACGT | 3 cut(s) | 102, 247, 372 |
| TaqI | TCGA | 6 cut(s) | 113, 155, 584, 795, 809, 869 |
| TasI | AATT | 2 cut(s) | 467, 800 |
| TauI | GCSGC | 7 cut(s) | 8, 11, 14, 17, 351, 410, 521 |
| TfiI | GAWTC | 4 cut(s) | 806, 973, 985, 1009 |
| Tru1I | TTAA | 4 cut(s) | 627, 729, 903, 1002 |
| Tru9I | TTAA | 4 cut(s) | 627, 729, 903, 1002 |
| TseFI | GTSAC | 2 cut(s) | 34, 130 |
| TseI | GCWGC | 3 cut(s) | 17, 20, 1136 |
| Tsp45I | GTSAC | 2 cut(s) | 34, 130 |
| TspDTI | ATGAA | 1 cut(s) | 119 |
| TspGWI | ACGGA | 1 cut(s) | 83 |
| Tth111I | GACNNNGTC | 2 cut(s) | 128, 784 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 49, 342 |
| Vha464I | CTTAAG | 1 cut(s) | 1001 |
| VpaK11BI | GGWCC | 3 cut(s) | 70, 270, 780 |
| XceI | RCATGY | 1 cut(s) | 307 |
| XspI | CTAG | 1 cut(s) | 1029 |
| ZraI | GACGTC | 1 cut(s) | 100 |