Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr12

Orthogroup ID

OG0003533

Physical Location & Seq

Genomic Coordinates Reverse (-)

14887139 .. 14889376

Gene Structure 2238 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom12g12420.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1317 bp

ATGGGGTATAAAATCAACTTTAAACACATTTGTCACAACCCTAAACCCTCACACCGCATCTCTCCCTCTCCATCTCTCACACTCCCCCCACTCTTAGAAATGGCCGCCGCCGCTCGCCCCCTCGTCACTGTCCAAACCCTTGACGTCGACATGGCCACCGATCAGTCCCAGACCGTCGCCTTACCCGACGTCATGAAGGTGCCGATCCGCCCCGACGTCGTCACAGCCGTCCACTCCCAAATGTCGAACAACAGCCGCCAGCCCTATGCGGTTTCCAAGAAGGCCGGTCACCAGACCTCCGCCGAGTCCTGGGGAACTGGACGCGCCGTCTCGCGTATCCCTCGTGTTCCCGGAGGCGGGACCCACCGCGCCGGGCAGGGAGCCTTCGGAAACATGTGCCGTGGCGGGCGTATGTTCGCTCCCACCAAGATCTGGCGCCGCTGGCACCGGAGGATCAACGTGAACCAGAAGCGATACGCGATCGTTTCGGCGATTGCGGCTTCTGCCGTTCCCTCTCTGGTCATGGCCCGCGGTCACAAAATCGAGACCGTTCCGGAGCTTCCTCTTGTTGTCAGCGACTCGGCTGAGGGGGTGGAGAAGACCTCGGCGGCTCTGAAGCTTCTGAAGCAGATTGGGGCTTACGCCGATGCCGAGAAGGCGAAGGACAGCCACGCGATTCGCCCTGGAAAGGGTAAGATGAGGAACAGGAGGTACATTAACCGCAAGGGACCTCTCATTGTGTACGGAACTGAAGGGGCTAAGCTGGTGAAGGCCTTCAGGAACCTTCCCGGTGTCGAGATTATCAATGTGGAGAGGCTCAACCTGCTAAAGCTCGCTCCTGGTGGGCATTTGGGTCGGTTTGTGATCTGGACCAAGTCCGCTTTCGAGAAGCTCGACTCGATTTACGGGTCGTTTGACAAGCTCTCGGAGAAGAAGAAGGGATATGTGCTGCCGAGGTCGAAGATGGTCAATGCTGACTTGGCTAGGATCATAAACTCTGATGAGGTGCAGTCAGTCGTCAGGCCTATCAAGAAGGATGCCAAGAGGGCTCCTATGAAAAAGAACCCTCTCAAAAACCTGAACACTTTGCTAAAGTTGAATCCTTATGCTAAAACTGCAAGGAGAATGTCTCTTTTGGCCGAGGAGCAGCGCGTGAAGGCTAAGAAGGAGAAGCTTGACAAGAAAAGAAAGCCCATTTCTAAGGAGGAGGCTACCGCCATCAAGGCAGCTGGAAAGGCTTGGTACAAAACTATGATCTCTGACAGCGATTACACCGAGTTCGACAACTTCACAAAGTGGCTCGGGGTTGCCCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002181 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003735 GO:0005198 GO:0005488 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005773 GO:0005774 GO:0005829 GO:0005840 GO:0005844 GO:0005886 GO:0005911 GO:0006412 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009506 GO:0009507 GO:0009536 GO:0009719 GO:0009725 GO:0009735 GO:0009987 GO:0010033 GO:0010467 GO:0015934 GO:0016020 GO:0019538 GO:0022625 GO:0022626 GO:0030054 GO:0030312 GO:0031090 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0034645 GO:0042221 GO:0042788 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044428 GO:0044437 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0050896 GO:0055044 GO:0070013 GO:0071704 GO:0071944 GO:0097159 GO:0098588 GO:0098805 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03010 map03010

Pfam Domains

Protein Families

Ribos_L4_asso_C Ribosomal_L4

Protein Analysis

439

Amino Acids

48.53

Weight (kDa)

10.33

Isoelectric Point (pI)

42.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ribosomal_L4	PF00573	60 - 300	1.6e-36	Ribosomal protein L4/L1 family
Ribos_L4_asso_C	PF14374	313 - 386	9.8e-28	60S ribosomal protein L4 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003533)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G09630 AT3G09630 AT5G02870 AT5G02870
fragaria_vesca	FvH4_4g07470 FvH4_6g15170 FvH4_6g15170 FvH4_6g15170
malus_domestica	MD12G1126000.v1.1 MD16G1251600.v1.1
prunus_persica	Prupe.1G078100_v2.0.a1 Prupe.1G078100_v2.0.a1 Prupe.6G242600_v2.0.a1
pyrus_communis	pycom04g10060 pycom12g12420 pycom16g21150
rosa_chinensis	RchiOBHm_Chr3g0468471 RchiOBHm_Chr6g0270851
rosa_laevigata	RLG00000013765 RLG00000024426
rosa_multiflora	Rmu_sc0000642.1_g000029 Rmu_sc0008735.1_g000002 Rmu_sc0008735.1_g000003
rosa_roxburghii	Rroxscaffold_6G00412730 Rroxscaffold_7G00197580
rosa_rugosa	Rorug03G0095700 Rorug06G0056900
rosa_samantha	Rh3AG143500 Rh3BG166000 Rh6AG176200 Rh6BG179400 Rh6CG175600 Rh6DG167900
rosa_wichuraiana	Rw3G013590 Rw6G015010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	3 cut(s)	147, 192, 219
Acc36I	ACCTGC	1 cut(s)	831
AccB1I	GGYRCC	3 cut(s)	199, 435, 444
AccB7I	CCANNNNNTGG	1 cut(s)	432
AccBSI	CCGCTC	1 cut(s)	113
AccI	GTMKAC	1 cut(s)	147
AccII	CGCG	7 cut(s)	324, 334, 369, 479, 531, 674, 1152
AccIII	TCCGGA	1 cut(s)	553
AclWI	GGATC	3 cut(s)	199, 461, 995
AcoI	YGGCCR	3 cut(s)	102, 153, 1137
AcuI	CTGAAG	4 cut(s)	635, 644, 760, 771
AcyI	GRCGYC	4 cut(s)	144, 189, 216, 436
AdeI	CACNNNGTG	1 cut(s)	1296
AfaI	GTAC	3 cut(s)	713, 743, 1244
AfiI	CCNNNNNNNGG	6 cut(s)	309, 356, 357, 432, 688, 689
AflIII	ACRYGT	1 cut(s)	393
AgsI	TTSAA	1 cut(s)	1099
AhdI	GACNNNNNGTC	1 cut(s)	326
AjnI	CCWGG	3 cut(s)	308, 682, 838
AjuI	GAANNNNNNNTTGG	2 cut(s)	866, 898
AluBI	AGCT	8 cut(s)	559, 619, 763, 832, 892, 922, 1174, 1229
AluI	AGCT	8 cut(s)	559, 619, 763, 832, 892, 922, 1174, 1229
Alw26I	GTCTC	3 cut(s)	334, 539, 1134
AlwI	GGATC	3 cut(s)	199, 461, 995
Ama87I	CYCGRG	1 cut(s)	1301
Aor13HI	TCCGGA	1 cut(s)	553
AoxI	GGCC	7 cut(s)	102, 153, 282, 525, 771, 1022, 1137
ApeKI	GCWGC	3 cut(s)	949, 1147, 1226
Asp700I	GAANNNNTTC	1 cut(s)	773
AspLEI	GCGC	4 cut(s)	326, 371, 438, 1152
AspS9I	GGNCC	4 cut(s)	360, 526, 728, 870
AsuC2I	CCSGG	3 cut(s)	351, 373, 789
AsuHPI	GGTGA	2 cut(s)	281, 778
AvaI	CYCGRG	1 cut(s)	1301
AvaII	GGWCC	3 cut(s)	360, 728, 870
BalI	TGGCCA	1 cut(s)	155
BanI	GGYRCC	3 cut(s)	199, 435, 444
BanII	GRGCYC	1 cut(s)	1051
BauI	CACGAG	1 cut(s)	342
BbsI	GAAGAC	1 cut(s)	605
BbvCI	CCTCAGC	1 cut(s)	585
BbvI	GCAGC	3 cut(s)	936, 1159, 1238
BccI	CCATC	3 cut(s)	79, 958, 1226
BceAI	ACGGC	4 cut(s)	212, 311, 384, 491
BcgI	CGANNNNNNTGC	2 cut(s)	836, 870
BciT130I	CCWGG	3 cut(s)	310, 684, 840
BciVI	GTATCC	1 cut(s)	347
BcnI	CCSGG	3 cut(s)	351, 373, 789
BcoDI	GTCTC	3 cut(s)	334, 539, 1134
BfaI	CTAG	1 cut(s)	984
BfoI	RGCGCY	1 cut(s)	439
BfuAI	ACCTGC	1 cut(s)	831
BfuI	GTATCC	1 cut(s)	347
BglI	GCCNNNNNGGC	3 cut(s)	656, 1046, 1223
BglII	AGATCT	1 cut(s)	429
BlpI	GCTNAGC	1 cut(s)	759
Bme1390I	CCNGG	6 cut(s)	310, 351, 373, 684, 789, 840
Bme18I	GGWCC	3 cut(s)	360, 728, 870
BmeRI	GACNNNNNGTC	1 cut(s)	326
BmeT110I	CYCGRG	1 cut(s)	1301
BmgT120I	GGNCC	4 cut(s)	360, 526, 728, 870
BmiI	GGNNCC	9 cut(s)	201, 361, 362, 382, 437, 446, 729, 782, 1050
BmrFI	CCNGG	6 cut(s)	310, 351, 373, 684, 789, 840
BmrI	ACTGGG	1 cut(s)	1306
BmsI	GCATC	3 cut(s)	66, 637, 1027
BmuI	ACTGGG	1 cut(s)	1306
BpiI	GAAGAC	1 cut(s)	605
BplI	GAGNNNNNCTC	4 cut(s)	587, 619, 1114, 1146
Bpu10I	CCTNAGC	1 cut(s)	585
Bpu1102I	GCTNAGC	1 cut(s)	759
BpuMI	CCSGG	3 cut(s)	351, 373, 789
BsaHI	GRCGYC	4 cut(s)	144, 189, 216, 436
BsaI	GGTCTC	1 cut(s)	539
BsaJI	CCNNGG	7 cut(s)	309, 400, 529, 603, 682, 953, 1140
BsaWI	WCCGGW	2 cut(s)	447, 553
BsaXI	ACNNNNNCTCC	2 cut(s)	281, 311
Bsc4I	CCNNNNNNNGG	6 cut(s)	309, 356, 357, 432, 688, 689
Bse118I	RCCGGY	1 cut(s)	284
Bse1I	ACTGG	2 cut(s)	322, 1312
BseAI	TCCGGA	1 cut(s)	553
BseBI	CCWGG	3 cut(s)	310, 684, 840
BseDI	CCNNGG	7 cut(s)	309, 400, 529, 603, 682, 953, 1140
BseGI	GGATG	1 cut(s)	1042
BseLI	CCNNNNNNNGG	6 cut(s)	309, 356, 357, 432, 688, 689
BseMII	CTCAG	1 cut(s)	576
BseNI	ACTGG	2 cut(s)	322, 1312
BseRI	GAGGAG	2 cut(s)	1157, 1220
BseXI	GCAGC	3 cut(s)	936, 1159, 1238
BsgI	GTGCAG	1 cut(s)	1028
Bsh1236I	CGCG	7 cut(s)	324, 334, 369, 479, 531, 674, 1152
Bsh1285I	CGRYCG	1 cut(s)	483
BshFI	GGCC	7 cut(s)	104, 155, 284, 527, 773, 1024, 1139
BshNI	GGYRCC	3 cut(s)	199, 435, 444
BsiEI	CGRYCG	1 cut(s)	483
BsiHKCI	CYCGRG	1 cut(s)	1301
BsiSI	CCGG	6 cut(s)	285, 351, 372, 448, 554, 789
BslFI	GGGAC	3 cut(s)	151, 373, 741
BslI	CCNNNNNNNGG	6 cut(s)	309, 356, 357, 432, 688, 689
BsmAI	GTCTC	3 cut(s)	334, 539, 1134
BsmBI	CGTCTC	1 cut(s)	334
BsmFI	GGGAC	3 cut(s)	151, 373, 741
BsnI	GGCC	7 cut(s)	104, 155, 284, 527, 773, 1024, 1139
Bso31I	GGTCTC	1 cut(s)	539
BsoBI	CYCGRG	1 cut(s)	1301
Bsp1286I	GDGCHC	1 cut(s)	1051
Bsp13I	TCCGGA	1 cut(s)	553
Bsp143I	GATC	8 cut(s)	160, 204, 429, 453, 480, 864, 987, 1254
Bsp1720I	GCTNAGC	1 cut(s)	759
BspANI	GGCC	7 cut(s)	104, 155, 284, 527, 773, 1024, 1139
BspCNI	CTCAG	1 cut(s)	577
BspEI	TCCGGA	1 cut(s)	553
BspFNI	CGCG	7 cut(s)	324, 334, 369, 479, 531, 674, 1152
BspHI	TCATGA	1 cut(s)	192
BspLI	GGNNCC	9 cut(s)	201, 361, 362, 382, 437, 446, 729, 782, 1050
BspMI	ACCTGC	1 cut(s)	831
BspPI	GGATC	3 cut(s)	199, 461, 995
BspT107I	GGYRCC	3 cut(s)	199, 435, 444
BspTNI	GGTCTC	1 cut(s)	539
BsrBI	CCGCTC	1 cut(s)	113
BsrFI	RCCGGY	1 cut(s)	284
BsrI	ACTGG	2 cut(s)	322, 1312
BssAI	RCCGGY	1 cut(s)	284
BssECI	CCNNGG	7 cut(s)	309, 400, 529, 603, 682, 953, 1140
BssMI	GATC	8 cut(s)	160, 204, 429, 453, 480, 864, 987, 1254
BssNI	GRCGYC	4 cut(s)	144, 189, 216, 436
BssSI	CACGAG	1 cut(s)	342
Bst2BI	CACGAG	1 cut(s)	342
Bst2UI	CCWGG	3 cut(s)	310, 684, 840
Bst4CI	ACNGT	3 cut(s)	130, 175, 550
BstACI	GRCGYC	4 cut(s)	144, 189, 216, 436
BstC8I	GCNNGC	6 cut(s)	115, 260, 407, 443, 529, 834
BstDEI	CTNAG	5 cut(s)	94, 585, 759, 1161, 1200
BstDSI	CCRYGG	2 cut(s)	400, 529
BstEII	GGTNACC	1 cut(s)	287
BstF5I	GGATG	1 cut(s)	1042
BstFNI	CGCG	7 cut(s)	324, 334, 369, 479, 531, 674, 1152
BstH2I	RGCGCY	1 cut(s)	439
BstHHI	GCGC	4 cut(s)	326, 371, 438, 1152
BstKTI	GATC	8 cut(s)	163, 207, 432, 456, 483, 867, 990, 1257
BstMAI	GTCTC	3 cut(s)	334, 539, 1134
BstMBI	GATC	8 cut(s)	160, 204, 429, 453, 480, 864, 987, 1254
BstMCI	CGRYCG	1 cut(s)	483
BstNI	CCWGG	3 cut(s)	310, 684, 840
BstNSI	RCATGY	1 cut(s)	397
BstPI	GGTNACC	1 cut(s)	287
BstSCI	CCNGG	6 cut(s)	308, 349, 371, 682, 787, 838
BstUI	CGCG	7 cut(s)	324, 334, 369, 479, 531, 674, 1152
BstV1I	GCAGC	3 cut(s)	936, 1159, 1238
BstV2I	GAAGAC	1 cut(s)	605
BstX2I	RGATCY	1 cut(s)	429
BstYI	RGATCY	1 cut(s)	429
BsuI	GTATCC	1 cut(s)	347
BsuRI	GGCC	7 cut(s)	104, 155, 284, 527, 773, 1024, 1139
BtgI	CCRYGG	2 cut(s)	400, 529
BtsCI	GGATG	1 cut(s)	1042
BtsIMutI	CAGTG	1 cut(s)	126
BveI	ACCTGC	1 cut(s)	831
Cac8I	GCNNGC	6 cut(s)	115, 260, 407, 443, 529, 834
CciI	TCATGA	1 cut(s)	192
CfoI	GCGC	4 cut(s)	326, 371, 438, 1152
Cfr10I	RCCGGY	1 cut(s)	284
Cfr13I	GGNCC	4 cut(s)	360, 526, 728, 870
Cfr42I	CCGCGG	1 cut(s)	532
CseI	GACGC	1 cut(s)	330
Csp6I	GTAC	3 cut(s)	712, 742, 1243
CviAII	CATG	4 cut(s)	151, 193, 394, 523
CviQI	GTAC	3 cut(s)	712, 742, 1243
DdeI	CTNAG	5 cut(s)	94, 585, 759, 1161, 1200
DinI	GGCGCC	1 cut(s)	437
DpnI	GATC	8 cut(s)	162, 206, 431, 455, 482, 866, 989, 1256
DpnII	GATC	8 cut(s)	160, 204, 429, 453, 480, 864, 987, 1254
DraI	TTTAAA	1 cut(s)	22
DraIII	CACNNNGTG	1 cut(s)	1296
DriI	GACNNNNNGTC	1 cut(s)	326
EaeI	YGGCCR	3 cut(s)	102, 153, 1137
Eam1105I	GACNNNNNGTC	1 cut(s)	326
EciI	GGCGGA	2 cut(s)	197, 289
Eco147I	AGGCCT	2 cut(s)	773, 1024
Eco24I	GRGCYC	1 cut(s)	1051
Eco31I	GGTCTC	1 cut(s)	539
Eco47I	GGWCC	3 cut(s)	360, 728, 870
Eco57I	CTGAAG	4 cut(s)	635, 644, 760, 771
Eco88I	CYCGRG	1 cut(s)	1301
Eco91I	GGTNACC	1 cut(s)	287
EcoO109I	RGGNCCY	2 cut(s)	360, 728
EcoO65I	GGTNACC	1 cut(s)	287
EcoRII	CCWGG	3 cut(s)	308, 682, 838
EcoT38I	GRGCYC	1 cut(s)	1051
EgeI	GGCGCC	1 cut(s)	437
EheI	GGCGCC	1 cut(s)	437
Esp3I	CGTCTC	1 cut(s)	334
FaeI	CATG	4 cut(s)	154, 196, 397, 526
FaqI	GGGAC	3 cut(s)	151, 373, 741
FatI	CATG	4 cut(s)	150, 192, 393, 522
FauI	CCCGC	3 cut(s)	350, 398, 536
FblI	GTMKAC	1 cut(s)	147
FokI	GGATG	1 cut(s)	1049
FriOI	GRGCYC	1 cut(s)	1051
FspBI	CTAG	1 cut(s)	984
GlaI	GCGC	4 cut(s)	325, 370, 437, 1151
HaeII	RGCGCY	1 cut(s)	439
HaeIII	GGCC	7 cut(s)	104, 155, 284, 527, 773, 1024, 1139
HapII	CCGG	6 cut(s)	285, 351, 372, 448, 554, 789
HgaI	GACGC	1 cut(s)	330
HhaI	GCGC	4 cut(s)	326, 371, 438, 1152
Hin1I	GRCGYC	4 cut(s)	144, 189, 216, 436
Hin1II	CATG	4 cut(s)	154, 196, 397, 526
Hin6I	GCGC	4 cut(s)	324, 369, 436, 1150
HinP1I	GCGC	4 cut(s)	324, 369, 436, 1150
HincII	GTYRAC	1 cut(s)	148
HindII	GTYRAC	1 cut(s)	148
HindIII	AAGCTT	2 cut(s)	617, 1172
HinfI	GANTC	5 cut(s)	305, 578, 676, 896, 1099
HpaII	CCGG	6 cut(s)	285, 351, 372, 448, 554, 789
HphI	GGTGA	2 cut(s)	281, 778
Hpy166II	GTNNAC	4 cut(s)	148, 232, 463, 742
Hpy188I	TCNGA	6 cut(s)	389, 615, 624, 928, 1000, 1261
Hpy188III	TCNNGA	8 cut(s)	193, 544, 554, 778, 796, 868, 886, 1030
Hpy8I	GTNNAC	4 cut(s)	148, 232, 463, 742
Hpy99I	CGWCG	5 cut(s)	149, 179, 191, 218, 221
HpyCH4III	ACNGT	3 cut(s)	130, 175, 550
HpyCH4IV	ACGT	4 cut(s)	144, 189, 216, 459
HpyCH4V	TGCA	2 cut(s)	1009, 1118
HpyF3I	CTNAG	5 cut(s)	94, 585, 759, 1161, 1200
HpySE526I	ACGT	4 cut(s)	144, 189, 216, 459
Hsp92I	GRCGYC	4 cut(s)	144, 189, 216, 436
Hsp92II	CATG	4 cut(s)	154, 196, 397, 526
HspAI	GCGC	4 cut(s)	324, 369, 436, 1150
KasI	GGCGCC	1 cut(s)	435
KflI	GGGWCCC	1 cut(s)	360
Kpn2I	TCCGGA	1 cut(s)	553
KspI	CCGCGG	1 cut(s)	532
Kzo9I	GATC	8 cut(s)	160, 204, 429, 453, 480, 864, 987, 1254
LmnI	GCTCC	6 cut(s)	380, 424, 556, 841, 1054, 1144
Lsp1109I	GCAGC	3 cut(s)	936, 1159, 1238
LweI	GCATC	3 cut(s)	66, 637, 1027
MaeI	CTAG	1 cut(s)	984
MaeII	ACGT	4 cut(s)	144, 189, 216, 459
MaeIII	GTNAC	5 cut(s)	32, 124, 220, 287, 533
MalI	GATC	8 cut(s)	162, 206, 431, 455, 482, 866, 989, 1256
MbiI	CCGCTC	1 cut(s)	113
MboI	GATC	8 cut(s)	160, 204, 429, 453, 480, 864, 987, 1254
MboII	GAAGA	4 cut(s)	610, 943, 946, 973
MflI	RGATCY	1 cut(s)	429
MhlI	GDGCHC	1 cut(s)	1051
MlsI	TGGCCA	1 cut(s)	155
MluNI	TGGCCA	1 cut(s)	155
Mly113I	GGCGCC	1 cut(s)	436
MlyI	GAGTC	3 cut(s)	314, 572, 890
Mox20I	TGGCCA	1 cut(s)	155
MroI	TCCGGA	1 cut(s)	553
MroXI	GAANNNNTTC	1 cut(s)	773
MscI	TGGCCA	1 cut(s)	155
MseI	TTAA	2 cut(s)	21, 717
MslI	CAYNNNNRTG	1 cut(s)	197
Msp20I	TGGCCA	1 cut(s)	155
MspA1I	CMGCKG	3 cut(s)	441, 531, 1229
MspI	CCGG	6 cut(s)	285, 351, 372, 448, 554, 789
MspR9I	CCNGG	6 cut(s)	310, 351, 373, 684, 789, 840
MvaI	CCWGG	3 cut(s)	310, 684, 840
MvnI	CGCG	7 cut(s)	324, 334, 369, 479, 531, 674, 1152
NarI	GGCGCC	1 cut(s)	436
NciI	CCSGG	3 cut(s)	351, 373, 789
NdeII	GATC	8 cut(s)	160, 204, 429, 453, 480, 864, 987, 1254
NlaIII	CATG	4 cut(s)	154, 196, 397, 526
NlaIV	GGNNCC	9 cut(s)	201, 361, 362, 382, 437, 446, 729, 782, 1050
NmeAIII	GCCGAG	6 cut(s)	328, 560, 584, 676, 978, 1165
NmuCI	GTSAC	5 cut(s)	32, 124, 220, 287, 533
NspI	RCATGY	1 cut(s)	397
PagI	TCATGA	1 cut(s)	192
PceI	AGGCCT	2 cut(s)	773, 1024
PciI	ACATGT	1 cut(s)	393
PcsI	WCGNNNNNNNCGW	4 cut(s)	183, 225, 648, 891
PdmI	GAANNNNTTC	1 cut(s)	773
PfeI	GAWTC	2 cut(s)	676, 1099
PflFI	GACNNNGTC	2 cut(s)	218, 874
PflMI	CCANNNNNTGG	1 cut(s)	432
PfoI	TCCNGGA	1 cut(s)	349
Ple19I	CGATCG	1 cut(s)	483
PleI	GAGTC	3 cut(s)	313, 572, 890
PluTI	GGCGCC	1 cut(s)	439
PpsI	GAGTC	3 cut(s)	313, 572, 890
PpuMI	RGGWCCY	2 cut(s)	360, 728
PscI	ACATGT	1 cut(s)	393
Psp5II	RGGWCCY	2 cut(s)	360, 728
Psp6I	CCWGG	3 cut(s)	308, 682, 838
PspEI	GGTNACC	1 cut(s)	287
PspGI	CCWGG	3 cut(s)	308, 682, 838
PspN4I	GGNNCC	9 cut(s)	201, 361, 362, 382, 437, 446, 729, 782, 1050
PspPI	GGNCC	4 cut(s)	360, 526, 728, 870
PspPPI	RGGWCCY	2 cut(s)	360, 728
PsrI	GAACNNNNNNTAC	2 cut(s)	695, 727
PsuI	RGATCY	1 cut(s)	429
PsyI	GACNNNGTC	2 cut(s)	218, 874
PvuI	CGATCG	1 cut(s)	483
PvuII	CAGCTG	1 cut(s)	1229
RsaI	GTAC	3 cut(s)	713, 743, 1244
RsaNI	GTAC	3 cut(s)	712, 742, 1243
RseI	CAYNNNNRTG	1 cut(s)	197
SacII	CCGCGG	1 cut(s)	532
SalI	GTCGAC	1 cut(s)	146
SaqAI	TTAA	2 cut(s)	21, 717
Sau3AI	GATC	8 cut(s)	160, 204, 429, 453, 480, 864, 987, 1254
Sau96I	GGNCC	4 cut(s)	360, 526, 728, 870
SchI	GAGTC	3 cut(s)	314, 572, 890
ScrFI	CCNGG	6 cut(s)	310, 351, 373, 684, 789, 840
SduI	GDGCHC	1 cut(s)	1051
SfaNI	GCATC	3 cut(s)	66, 637, 1027
SfoI	GGCGCC	1 cut(s)	437
Sfr303I	CCGCGG	1 cut(s)	532
SgrBI	CCGCGG	1 cut(s)	532
SinI	GGWCC	3 cut(s)	360, 728, 870
SmiMI	CAYNNNNRTG	1 cut(s)	197
SseBI	AGGCCT	2 cut(s)	773, 1024
SspDI	GGCGCC	1 cut(s)	435
SspMI	CTAG	1 cut(s)	984
StuI	AGGCCT	2 cut(s)	773, 1024
StyD4I	CCNGG	6 cut(s)	308, 349, 371, 682, 787, 838
TaaI	ACNGT	3 cut(s)	130, 175, 550
TaiI	ACGT	4 cut(s)	147, 192, 219, 462
TaqI	TCGA	9 cut(s)	147, 245, 543, 795, 885, 894, 899, 959, 1281
TauI	GCSGC	7 cut(s)	107, 110, 113, 258, 441, 500, 611
TfiI	GAWTC	2 cut(s)	676, 1099
Tru1I	TTAA	2 cut(s)	21, 717
Tru9I	TTAA	2 cut(s)	21, 717
TscAI	CASTG	1 cut(s)	133
TseFI	GTSAC	5 cut(s)	32, 124, 220, 287, 533
TseI	GCWGC	3 cut(s)	949, 1147, 1226
Tsp45I	GTSAC	5 cut(s)	32, 124, 220, 287, 533
TspDTI	ATGAA	2 cut(s)	209, 1070
TspGWI	ACGGA	1 cut(s)	759
TspRI	CASTG	1 cut(s)	133
Tth111I	GACNNNGTC	2 cut(s)	218, 874
Van91I	CCANNNNNTGG	1 cut(s)	432
VpaK11BI	GGWCC	3 cut(s)	360, 728, 870
XceI	RCATGY	1 cut(s)	397
XmiI	GTMKAC	1 cut(s)	147
XmnI	GAANNNNTTC	1 cut(s)	773
XspI	CTAG	1 cut(s)	984
ZraI	GACGTC	3 cut(s)	145, 190, 217

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.