Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0003533

Physical Location & Seq

Genomic Coordinates Forward (+)

28177900 .. 28181821

Gene Structure 3922 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1251600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1221 bp

ATGGCCGCCGCCGCTGTGCGTCCCTTGGTCACCGTCCAGTCTCTGGACGGTGACATGGCCACCGACCAGAGCCATATCGTCTGCTTGCCTGATGTCATGAAGGCCTCCATCCGGCCCGACATCGTCACCTTCGTCCACTCCAACATCTCCAAGAACAGCCGCCAGCCCTACGCCGTGTCCAGAAAAGCCGGCCACCAGACCTCCGCCGAGTCCTGGGGAACCGGGCGAGCCGTCTCCCGTATCCCACGTGTTCCCGGAGGTGGGACTCACCGCGCTGGCCAAGGAGCCTTCGGAAACATGTGCCGTGGTGGCCGCATGTTCGCTCCTACCAAGATCTGGCGCCGCTGGCACCGGAGAGTCAACGTCAACCAGAAGCGCTACGCGGTCGTTTCGGCCATTGCCGCTTCGGCAGTCCCGTCTCTGGTTATGGCTCGCGGGCATAAAATAGAGACTGTTCCAGAATTGCCCCTGGTCGTTAACGACTCCATTGAGGGGGTTGAGAAGACCTCGGCGGCTCTGAAGGTGTTGAAGGAGATCGGGGCTTACGCCGATGCCGAGAAGGCAAAGGACAGCCATTCGATTCGACCTGGAAAGGGGAAGATGAGGAATCGGAGGTACATCAACCGTAAGGGGCCGTTGATTGTGTACGGAACTGAGGGGGCGAAGCTTGTGAAGGCATTTAGGAACATTCCTGGTGTCGATATTATCAATGTGGAGAGGCTTAGTCTGCTGAAGCTTGCTCCCGGTGGGCATTTGGGTCGGTTTGTGGTCTGGACCAAGTCGGCTTTCGAAAAGCTGGATTCGATTTATGGATCCTTCGATAAGGTTTCTGAGAAGAAGAAGGGGTATGTGTTGCCGAGGTCGAAGATGGTGAATGCTGATCTGGGTAGGATTATTAACTCGGACGAGGTCCAGAGCGTTGTGAGGCCGATTAAGAAGGATGCGAAGAGGGCTCCAATGAAGAAGAACCCACTAAAGAATCTGAATACTTTGTTGAAGTTGAATCCATATGCGAAGACTGCTAGGAGAATGGCTCTGTTGGCTGAGGCTGAGAGGGTTAAGGCTAAGAAGGAGAAGCTCGACAAGAAGAGGAAGCCCATTACCAAGGAGGAAGCTACTGCCATTAAGGCCGCTGGTAAGGCATGGTACAAAACTATGATCTCAGACAGTGACTACACCGAGTTTGACAACTTTACAAAGTGGCTAGGGGTTGCTGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002181 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003735 GO:0005198 GO:0005488 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005773 GO:0005774 GO:0005829 GO:0005840 GO:0005844 GO:0005886 GO:0005911 GO:0006412 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009506 GO:0009507 GO:0009536 GO:0009719 GO:0009725 GO:0009735 GO:0009987 GO:0010033 GO:0010467 GO:0015934 GO:0016020 GO:0019538 GO:0022625 GO:0022626 GO:0030054 GO:0030312 GO:0031090 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0034645 GO:0042221 GO:0042788 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044428 GO:0044437 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0050896 GO:0055044 GO:0070013 GO:0071704 GO:0071944 GO:0097159 GO:0098588 GO:0098805 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03010 map03010

Pfam Domains

Protein Families

Ribos_L4_asso_C Ribosomal_L4

Protein Analysis

407

Amino Acids

44.86

Weight (kDa)

10.28

Isoelectric Point (pI)

40.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ribosomal_L4	PF00573	29 - 268	1.8e-35	Ribosomal protein L4/L1 family
Ribos_L4_asso_C	PF14374	281 - 353	6.3e-28	60S ribosomal protein L4 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003533)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G09630 AT3G09630 AT5G02870 AT5G02870
fragaria_vesca	FvH4_4g07470 FvH4_6g15170 FvH4_6g15170 FvH4_6g15170
malus_domestica	MD12G1126000.v1.1 MD16G1251600.v1.1
prunus_persica	Prupe.1G078100_v2.0.a1 Prupe.1G078100_v2.0.a1 Prupe.6G242600_v2.0.a1
pyrus_communis	pycom04g10060 pycom12g12420 pycom16g21150
rosa_chinensis	RchiOBHm_Chr3g0468471 RchiOBHm_Chr6g0270851
rosa_laevigata	RLG00000013765 RLG00000024426
rosa_multiflora	Rmu_sc0000642.1_g000029 Rmu_sc0008735.1_g000002 Rmu_sc0008735.1_g000003
rosa_roxburghii	Rroxscaffold_6G00412730 Rroxscaffold_7G00197580
rosa_rugosa	Rorug03G0095700 Rorug06G0056900
rosa_samantha	Rh3AG143500 Rh3BG166000 Rh6AG176200 Rh6BG179400 Rh6CG175600 Rh6DG167900
rosa_wichuraiana	Rw3G013590 Rw6G015010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	339, 348
AccB7I	CCANNNNNTGG	2 cut(s)	43, 336
AccII	CGCG	3 cut(s)	273, 383, 435
AclWI	GGATC	2 cut(s)	807, 820
AcoI	YGGCCR	6 cut(s)	3, 57, 190, 277, 310, 393
AcuI	CTGAAG	2 cut(s)	539, 752
AcvI	CACGTG	1 cut(s)	248
AcyI	GRCGYC	1 cut(s)	340
AfaI	GTAC	3 cut(s)	617, 647, 1148
AfeI	AGCGCT	1 cut(s)	377
AfiI	CCNNNNNNNGG	9 cut(s)	43, 111, 213, 260, 261, 336, 421, 492, 593
AflIII	ACRYGT	2 cut(s)	247, 297
AgsI	TTSAA	3 cut(s)	529, 997, 1003
AjnI	CCWGG	4 cut(s)	212, 468, 586, 691
AjuI	GAANNNNNNNTTGG	2 cut(s)	770, 802
AluBI	AGCT	5 cut(s)	667, 736, 796, 1078, 1115
AluI	AGCT	5 cut(s)	667, 736, 796, 1078, 1115
Alw26I	GTCTC	4 cut(s)	45, 238, 423, 443
AlwI	GGATC	2 cut(s)	807, 820
AlwNI	CAGNNNCTG	1 cut(s)	43
Aor51HI	AGCGCT	1 cut(s)	377
AspLEI	GCGC	3 cut(s)	275, 342, 378
AspS9I	GGNCC	4 cut(s)	114, 632, 774, 910
AsuC2I	CCSGG	3 cut(s)	223, 255, 744
AsuHPI	GGTGA	5 cut(s)	22, 62, 118, 260, 883
AsuII	TTCGAA	1 cut(s)	789
AvaII	GGWCC	2 cut(s)	774, 910
BalI	TGGCCA	2 cut(s)	59, 279
BamHI	GGATCC	1 cut(s)	812
BanI	GGYRCC	2 cut(s)	339, 348
BanII	GRGCYC	1 cut(s)	955
BbrPI	CACGTG	1 cut(s)	248
BbsI	GAAGAC	2 cut(s)	509, 1022
BbvCI	CCTCAGC	1 cut(s)	1044
BccI	CCATC	2 cut(s)	116, 862
BceAI	ACGGC	4 cut(s)	158, 215, 288, 619
BcgI	CGANNNNNNTGC	2 cut(s)	740, 774
BciT130I	CCWGG	4 cut(s)	214, 470, 588, 693
BciVI	GTATCC	1 cut(s)	251
BcnI	CCSGG	3 cut(s)	223, 255, 744
BcoDI	GTCTC	4 cut(s)	45, 238, 423, 443
BfaI	CTAG	2 cut(s)	1023, 1205
BfoI	RGCGCY	2 cut(s)	343, 379
BfuI	GTATCC	1 cut(s)	251
BglI	GCCNNNNNGGC	4 cut(s)	309, 407, 560, 1127
BglII	AGATCT	1 cut(s)	333
BisI	GCNGC	9 cut(s)	6, 9, 12, 160, 313, 343, 402, 513, 1131
BlsI	GCNGC	9 cut(s)	7, 10, 13, 161, 314, 344, 403, 514, 1132
Bme1390I	CCNGG	7 cut(s)	214, 223, 255, 470, 588, 693, 744
Bme18I	GGWCC	2 cut(s)	774, 910
BmgT120I	GGNCC	4 cut(s)	114, 632, 774, 910
BmiI	GGNNCC	7 cut(s)	220, 286, 341, 350, 633, 814, 954
BmrFI	CCNGG	7 cut(s)	214, 223, 255, 470, 588, 693, 744
BmsI	GCATC	2 cut(s)	541, 931
BpiI	GAAGAC	2 cut(s)	509, 1022
BplI	GAGNNNNNCTC	4 cut(s)	491, 523, 1018, 1050
Bpu10I	CCTNAGC	1 cut(s)	1044
Bpu14I	TTCGAA	1 cut(s)	789
BpuMI	CCSGG	3 cut(s)	223, 255, 744
BsaAI	YACGTR	1 cut(s)	248
BsaHI	GRCGYC	1 cut(s)	340
BsaJI	CCNNGG	8 cut(s)	24, 213, 280, 304, 468, 507, 857, 1104
BsaWI	WCCGGW	1 cut(s)	351
BsaXI	ACNNNNNCTCC	2 cut(s)	185, 215
Bsc4I	CCNNNNNNNGG	9 cut(s)	43, 111, 213, 260, 261, 336, 421, 492, 593
Bse118I	RCCGGY	1 cut(s)	188
Bse1I	ACTGG	1 cut(s)	37
Bse3DI	GCAATG	1 cut(s)	396
BseBI	CCWGG	4 cut(s)	214, 470, 588, 693
BseDI	CCNNGG	8 cut(s)	24, 213, 280, 304, 468, 507, 857, 1104
BseGI	GGATG	2 cut(s)	108, 946
BseLI	CCNNNNNNNGG	9 cut(s)	43, 111, 213, 260, 261, 336, 421, 492, 593
BseMI	GCAATG	1 cut(s)	396
BseMII	CTCAG	6 cut(s)	645, 822, 1035, 1041, 1176, 1206
BseNI	ACTGG	1 cut(s)	37
Bsh1236I	CGCG	3 cut(s)	273, 383, 435
Bsh1285I	CGRYCG	1 cut(s)	387
BshNI	GGYRCC	2 cut(s)	339, 348
BsiEI	CGRYCG	1 cut(s)	387
BsiSI	CCGG	6 cut(s)	112, 189, 222, 255, 352, 744
BslFI	GGGAC	3 cut(s)	6, 277, 398
BslI	CCNNNNNNNGG	9 cut(s)	43, 111, 213, 260, 261, 336, 421, 492, 593
BsmAI	GTCTC	4 cut(s)	45, 238, 423, 443
BsmBI	CGTCTC	2 cut(s)	238, 423
BsmFI	GGGAC	3 cut(s)	6, 277, 398
BsmI	GAATGC	1 cut(s)	880
Bsp119I	TTCGAA	1 cut(s)	789
Bsp1286I	GDGCHC	1 cut(s)	955
Bsp143I	GATC	5 cut(s)	333, 534, 812, 880, 1158
BspCNI	CTCAG	6 cut(s)	646, 823, 1036, 1042, 1175, 1207
BspFNI	CGCG	3 cut(s)	273, 383, 435
BspHI	TCATGA	1 cut(s)	96
BspLI	GGNNCC	7 cut(s)	220, 286, 341, 350, 633, 814, 954
BspPI	GGATC	2 cut(s)	807, 820
BspT104I	TTCGAA	1 cut(s)	789
BspT107I	GGYRCC	2 cut(s)	339, 348
BsrDI	GCAATG	1 cut(s)	396
BsrFI	RCCGGY	1 cut(s)	188
BsrI	ACTGG	1 cut(s)	37
BssAI	RCCGGY	1 cut(s)	188
BssECI	CCNNGG	8 cut(s)	24, 213, 280, 304, 468, 507, 857, 1104
BssMI	GATC	5 cut(s)	333, 534, 812, 880, 1158
BssNI	GRCGYC	1 cut(s)	340
BssT1I	CCWWGG	3 cut(s)	24, 280, 1104
Bst2UI	CCWGG	4 cut(s)	214, 470, 588, 693
Bst4CI	ACNGT	5 cut(s)	34, 50, 454, 626, 1169
Bst6I	CTCTTC	2 cut(s)	941, 1082
BstACI	GRCGYC	1 cut(s)	340
BstBAI	YACGTR	1 cut(s)	248
BstBI	TTCGAA	1 cut(s)	789
BstC8I	GCNNGC	9 cut(s)	86, 164, 190, 228, 277, 347, 433, 437, 738
BstDEI	CTNAG	8 cut(s)	654, 722, 831, 1044, 1050, 1065, 1162, 1215
BstDSI	CCRYGG	1 cut(s)	304
BstEII	GGTNACC	1 cut(s)	28
BstF5I	GGATG	2 cut(s)	108, 946
BstFNI	CGCG	3 cut(s)	273, 383, 435
BstH2I	RGCGCY	2 cut(s)	343, 379
BstHHI	GCGC	3 cut(s)	275, 342, 378
BstKTI	GATC	5 cut(s)	336, 537, 815, 883, 1161
BstMAI	GTCTC	4 cut(s)	45, 238, 423, 443
BstMBI	GATC	5 cut(s)	333, 534, 812, 880, 1158
BstMCI	CGRYCG	1 cut(s)	387
BstNI	CCWGG	4 cut(s)	214, 470, 588, 693
BstNSI	RCATGY	2 cut(s)	301, 319
BstPI	GGTNACC	1 cut(s)	28
BstSCI	CCNGG	7 cut(s)	212, 221, 253, 468, 586, 691, 742
BstUI	CGCG	3 cut(s)	273, 383, 435
BstV2I	GAAGAC	2 cut(s)	509, 1022
BstX2I	RGATCY	2 cut(s)	333, 812
BstYI	RGATCY	2 cut(s)	333, 812
BsuI	GTATCC	1 cut(s)	251
BtgI	CCRYGG	1 cut(s)	304
BtsCI	GGATG	2 cut(s)	108, 946
BtsIMutI	CAGTG	1 cut(s)	1174
Cac8I	GCNNGC	9 cut(s)	86, 164, 190, 228, 277, 347, 433, 437, 738
CaiI	CAGNNNCTG	1 cut(s)	43
CciI	TCATGA	1 cut(s)	96
CfoI	GCGC	3 cut(s)	275, 342, 378
Cfr10I	RCCGGY	1 cut(s)	188
Cfr13I	GGNCC	4 cut(s)	114, 632, 774, 910
CseI	GACGC	1 cut(s)	8
Csp6I	GTAC	3 cut(s)	616, 646, 1147
CviAII	CATG	5 cut(s)	55, 97, 298, 316, 1143
CviQI	GTAC	3 cut(s)	616, 646, 1147
DdeI	CTNAG	8 cut(s)	654, 722, 831, 1044, 1050, 1065, 1162, 1215
DinI	GGCGCC	1 cut(s)	341
DpnI	GATC	5 cut(s)	335, 536, 814, 882, 1160
DpnII	GATC	5 cut(s)	333, 534, 812, 880, 1158
EaeI	YGGCCR	6 cut(s)	3, 57, 190, 277, 310, 393
Eam1104I	CTCTTC	2 cut(s)	941, 1082
EarI	CTCTTC	2 cut(s)	941, 1082
EciI	GGCGGA	1 cut(s)	193
Eco130I	CCWWGG	3 cut(s)	24, 280, 1104
Eco147I	AGGCCT	1 cut(s)	104
Eco24I	GRGCYC	1 cut(s)	955
Eco47I	GGWCC	2 cut(s)	774, 910
Eco47III	AGCGCT	1 cut(s)	377
Eco57I	CTGAAG	2 cut(s)	539, 752
Eco72I	CACGTG	1 cut(s)	248
Eco91I	GGTNACC	1 cut(s)	28
EcoO65I	GGTNACC	1 cut(s)	28
EcoRII	CCWGG	4 cut(s)	212, 468, 586, 691
EcoT14I	CCWWGG	3 cut(s)	24, 280, 1104
EcoT38I	GRGCYC	1 cut(s)	955
EgeI	GGCGCC	1 cut(s)	341
EheI	GGCGCC	1 cut(s)	341
ErhI	CCWWGG	3 cut(s)	24, 280, 1104
Esp3I	CGTCTC	2 cut(s)	238, 423
FaeI	CATG	5 cut(s)	58, 100, 301, 319, 1146
FaqI	GGGAC	3 cut(s)	6, 277, 398
FatI	CATG	5 cut(s)	54, 96, 297, 315, 1142
FauI	CCCGC	1 cut(s)	428
FauNDI	CATATG	1 cut(s)	1009
Fnu4HI	GCNGC	9 cut(s)	6, 9, 12, 160, 313, 343, 402, 513, 1131
FokI	GGATG	2 cut(s)	95, 953
FriOI	GRGCYC	1 cut(s)	955
Fsp4HI	GCNGC	9 cut(s)	6, 9, 12, 160, 313, 343, 402, 513, 1131
FspBI	CTAG	2 cut(s)	1023, 1205
GlaI	GCGC	3 cut(s)	274, 341, 377
GluI	GCNGC	9 cut(s)	6, 9, 12, 160, 313, 343, 402, 513, 1131
HaeII	RGCGCY	2 cut(s)	343, 379
HapII	CCGG	6 cut(s)	112, 189, 222, 255, 352, 744
HgaI	GACGC	1 cut(s)	8
HhaI	GCGC	3 cut(s)	275, 342, 378
Hin1I	GRCGYC	1 cut(s)	340
Hin1II	CATG	5 cut(s)	58, 100, 301, 319, 1146
Hin6I	GCGC	3 cut(s)	273, 340, 376
HinP1I	GCGC	3 cut(s)	273, 340, 376
HincII	GTYRAC	3 cut(s)	361, 367, 478
HindII	GTYRAC	3 cut(s)	361, 367, 478
HindIII	AAGCTT	2 cut(s)	665, 734
HinfI	GANTC	9 cut(s)	209, 265, 357, 482, 580, 607, 800, 979, 1003
HpaI	GTTAAC	1 cut(s)	478
HpaII	CCGG	6 cut(s)	112, 189, 222, 255, 352, 744
HphI	GGTGA	5 cut(s)	22, 62, 118, 260, 883
Hpy166II	GTNNAC	5 cut(s)	136, 361, 367, 478, 646
Hpy188I	TCNGA	7 cut(s)	293, 519, 612, 832, 904, 984, 1165
Hpy188III	TCNNGA	6 cut(s)	44, 97, 180, 458, 772, 913
Hpy8I	GTNNAC	5 cut(s)	136, 361, 367, 478, 646
HpyCH4III	ACNGT	5 cut(s)	34, 50, 454, 626, 1169
HpyCH4IV	ACGT	2 cut(s)	247, 363
HpyF3I	CTNAG	8 cut(s)	654, 722, 831, 1044, 1050, 1065, 1162, 1215
HpySE526I	ACGT	2 cut(s)	247, 363
Hsp92I	GRCGYC	1 cut(s)	340
Hsp92II	CATG	5 cut(s)	58, 100, 301, 319, 1146
HspAI	GCGC	3 cut(s)	273, 340, 376
KasI	GGCGCC	1 cut(s)	339
KroI	GCCGGC	1 cut(s)	188
KroNI	GCCGGC	1 cut(s)	190
KspAI	GTTAAC	1 cut(s)	478
Kzo9I	GATC	5 cut(s)	333, 534, 812, 880, 1158
LmnI	GCTCC	4 cut(s)	284, 328, 745, 958
LweI	GCATC	2 cut(s)	541, 931
MaeI	CTAG	2 cut(s)	1023, 1205
MaeII	ACGT	2 cut(s)	247, 363
MaeIII	GTNAC	4 cut(s)	28, 50, 124, 1169
MalI	GATC	5 cut(s)	335, 536, 814, 882, 1160
MboI	GATC	5 cut(s)	333, 534, 812, 880, 1158
MflI	RGATCY	2 cut(s)	333, 812
MhlI	GDGCHC	1 cut(s)	955
MlsI	TGGCCA	2 cut(s)	59, 279
MluCI	AATT	1 cut(s)	461
MluNI	TGGCCA	2 cut(s)	59, 279
Mly113I	GGCGCC	1 cut(s)	340
MlyI	GAGTC	4 cut(s)	218, 259, 366, 476
MmeI	TCCRAC	1 cut(s)	165
Mox20I	TGGCCA	2 cut(s)	59, 279
MroNI	GCCGGC	1 cut(s)	188
MscI	TGGCCA	2 cut(s)	59, 279
MseI	TTAA	5 cut(s)	477, 897, 933, 1059, 1125
Msp20I	TGGCCA	2 cut(s)	59, 279
MspA1I	CMGCKG	3 cut(s)	14, 345, 1133
MspI	CCGG	6 cut(s)	112, 189, 222, 255, 352, 744
MspR9I	CCNGG	7 cut(s)	214, 223, 255, 470, 588, 693, 744
Mva1269I	GAATGC	1 cut(s)	880
MvaI	CCWGG	4 cut(s)	214, 470, 588, 693
MvnI	CGCG	3 cut(s)	273, 383, 435
NaeI	GCCGGC	1 cut(s)	190
NarI	GGCGCC	1 cut(s)	340
NciI	CCSGG	3 cut(s)	223, 255, 744
NdeI	CATATG	1 cut(s)	1009
NdeII	GATC	5 cut(s)	333, 534, 812, 880, 1158
NgoMIV	GCCGGC	1 cut(s)	188
NlaIII	CATG	5 cut(s)	58, 100, 301, 319, 1146
NlaIV	GGNNCC	7 cut(s)	220, 286, 341, 350, 633, 814, 954
NmeAIII	GCCGAG	4 cut(s)	232, 488, 580, 882
NmuCI	GTSAC	4 cut(s)	28, 50, 124, 1169
NspI	RCATGY	2 cut(s)	301, 319
NspV	TTCGAA	1 cut(s)	789
PagI	TCATGA	1 cut(s)	96
PceI	AGGCCT	1 cut(s)	104
PciI	ACATGT	1 cut(s)	297
PcsI	WCGNNNNNNNCGW	3 cut(s)	129, 413, 552
PctI	GAATGC	1 cut(s)	880
PdiI	GCCGGC	1 cut(s)	190
PfeI	GAWTC	5 cut(s)	580, 607, 800, 979, 1003
PflFI	GACNNNGTC	3 cut(s)	122, 778, 908
PflMI	CCANNNNNTGG	2 cut(s)	43, 336
PfoI	TCCNGGA	1 cut(s)	253
PkrI	GCNGC	9 cut(s)	7, 10, 13, 161, 314, 344, 403, 514, 1132
PleI	GAGTC	4 cut(s)	217, 259, 365, 476
PluTI	GGCGCC	1 cut(s)	343
PmaCI	CACGTG	1 cut(s)	248
PmlI	CACGTG	1 cut(s)	248
PpsI	GAGTC	4 cut(s)	217, 259, 365, 476
Ppu21I	YACGTR	1 cut(s)	248
PscI	ACATGT	1 cut(s)	297
Psp6I	CCWGG	4 cut(s)	212, 468, 586, 691
PspCI	CACGTG	1 cut(s)	248
PspEI	GGTNACC	1 cut(s)	28
PspGI	CCWGG	4 cut(s)	212, 468, 586, 691
PspN4I	GGNNCC	7 cut(s)	220, 286, 341, 350, 633, 814, 954
PspPI	GGNCC	4 cut(s)	114, 632, 774, 910
PstNI	CAGNNNCTG	1 cut(s)	43
PsuI	RGATCY	2 cut(s)	333, 812
PsyI	GACNNNGTC	3 cut(s)	122, 778, 908
RsaI	GTAC	3 cut(s)	617, 647, 1148
RsaNI	GTAC	3 cut(s)	616, 646, 1147
SaqAI	TTAA	5 cut(s)	477, 897, 933, 1059, 1125
SatI	GCNGC	9 cut(s)	6, 9, 12, 160, 313, 343, 402, 513, 1131
Sau3AI	GATC	5 cut(s)	333, 534, 812, 880, 1158
Sau96I	GGNCC	4 cut(s)	114, 632, 774, 910
SchI	GAGTC	4 cut(s)	218, 259, 366, 476
ScrFI	CCNGG	7 cut(s)	214, 223, 255, 470, 588, 693, 744
SduI	GDGCHC	1 cut(s)	955
SfaNI	GCATC	2 cut(s)	541, 931
SfoI	GGCGCC	1 cut(s)	341
SfuI	TTCGAA	1 cut(s)	789
SinI	GGWCC	2 cut(s)	774, 910
Sse9I	AATT	1 cut(s)	461
SseBI	AGGCCT	1 cut(s)	104
SspDI	GGCGCC	1 cut(s)	339
SspMI	CTAG	2 cut(s)	1023, 1205
StuI	AGGCCT	1 cut(s)	104
StyD4I	CCNGG	7 cut(s)	212, 221, 253, 468, 586, 691, 742
StyI	CCWWGG	3 cut(s)	24, 280, 1104
TaaI	ACNGT	5 cut(s)	34, 50, 454, 626, 1169
TaiI	ACGT	2 cut(s)	250, 366
TaqI	TCGA	8 cut(s)	578, 583, 699, 789, 803, 819, 863, 1080
TasI	AATT	1 cut(s)	461
TauI	GCSGC	9 cut(s)	8, 11, 14, 162, 315, 345, 404, 515, 1133
TfiI	GAWTC	5 cut(s)	580, 607, 800, 979, 1003
Tru1I	TTAA	5 cut(s)	477, 897, 933, 1059, 1125
Tru9I	TTAA	5 cut(s)	477, 897, 933, 1059, 1125
TscAI	CASTG	1 cut(s)	1174
TseFI	GTSAC	4 cut(s)	28, 50, 124, 1169
Tsp45I	GTSAC	4 cut(s)	28, 50, 124, 1169
TspDTI	ATGAA	2 cut(s)	113, 974
TspGWI	ACGGA	1 cut(s)	663
TspRI	CASTG	1 cut(s)	1174
Tth111I	GACNNNGTC	3 cut(s)	122, 778, 908
Van91I	CCANNNNNTGG	2 cut(s)	43, 336
VpaK11BI	GGWCC	2 cut(s)	774, 910
XceI	RCATGY	2 cut(s)	301, 319
XspI	CTAG	2 cut(s)	1023, 1205

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.