pycom16g21150

60S ribosomal Protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
Physical Location & Seq
Forward (+)
19373978 .. 19375836
1859 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom16g21150.2

Sequence Viewer

Length: 1224 bp
ATGGCCGCCGCCGCCGCTGTGCGTCCCTTGGTCACCGTCCAGTCTCTGGACGGCGACATGGCCACCGACCAGAGCCAAACCGTCTCCTTGCCTGATGTCATGAAGGCCTCCATCCGGCCCGACATCGTCACCTTCGTCCACTCCAACATCTCCAAGAACAGCCGCCAGCCCTACGCCGTGTCCAGGAAAGCCGGCCACCAGACCTCCGCCGAGTCCTGGGGAACTGGGCGAGCCGTCTCCCGTATCCCACGTGTTCCCGGAGGTGGGACTCACCGCGCTGGCCAAGGAGCCTTCGGAAACATGTGCCGTGGTGGCCGCATGTTCGCTCCTACCAAGATCTGGCGCCGTTGGCACCGGAGAGTCAATGTCAACCAGAAGCGCTACGCGGTCGTTTCGGCCATTGCCGCTTCGGCAGTCCCGTCTCTGGTTATGGCTCGCGGGCATAAAATAGAGACTGTTCCAGAATTGCCCCTGGTCGTTAACGACTCCATTGAGGGGGTTGAGAAGACCTCGGCGGCTCTGAAGGTGTTGAAGGAGATCGGGGCTTACGCCGATGCCGAGAAGGCAAAGGACAGCCATTCGATTCGACCTGGAAAGGGGAAGATGAGGAATCGGAGGTACATCAACCGTAAGGGGCCGTTGATTGTGTACGGAAGTGAGGGGGCGAAGCTTGTGAAGGCATTTAGGAACATTCCTGGTGTCGATATTATCAATGTGGAGAGGCTTAGTCTGCTGAAGCTTGCTCCCGGTGGGCATTTGGGTCGGTTTGTGGTCTGGACCAAGTCGGCTTTCCAAAAGCTGGATTCGATTTATGGATCCTTCGATAAGGTTTCTGAGAAGAAGAAGAGGTATGTGTTGCCGAGGTCGAAGATGGTGAATGCTGATCTGGGTAGGATTATTAACTCGGACGAGGTCCAGAGCGTTGTGAGGCCGATTAAGAAGGATGCGAAGAGGGCTCCAATGAAGAAGAACCCACTAAAGAATCTGAATACTTTGTTGAAGTTGAATCCATATGCGAAGACTGCTAGGAGAATGGCTCTGTTGGCTGAGGCTGAGAGGGTTAAGGCTAAGAAGGAGAAGCTCGACAAGAAGAGGAAGCCCATTACCAAGGAGGAAGCTACTGCCATTAAGGCCGCTGGTAAGGCATGGTACAAAACTATGATCTCAGACAGTGACTACACCGAGTTTGACAACTTTACAAAGTGGCTAGCGGTAGCCGAGTGA

Protein Analysis

408

Amino Acids

44.99

Weight (kDa)

10.39

Isoelectric Point (pI)

40.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 342, 351
AccB7I CCANNNNNTGG 3 cut(s) 46, 339, 799
AccII CGCG 3 cut(s) 276, 386, 438
AclWI GGATC 2 cut(s) 810, 823
AcoI YGGCCR 6 cut(s) 3, 60, 193, 280, 313, 396
AcuI CTGAAG 2 cut(s) 542, 755
AcvI CACGTG 1 cut(s) 251
AcyI GRCGYC 1 cut(s) 343
AfaI GTAC 3 cut(s) 620, 650, 1151
AfeI AGCGCT 1 cut(s) 380
AflIII ACRYGT 2 cut(s) 250, 300
AgsI TTSAA 3 cut(s) 532, 1000, 1006
AjnI CCWGG 5 cut(s) 182, 215, 471, 589, 694
AjuI GAANNNNNNNTTGG 2 cut(s) 773, 805
AluBI AGCT 5 cut(s) 670, 739, 799, 1081, 1118
AluI AGCT 5 cut(s) 670, 739, 799, 1081, 1118
Alw26I GTCTC 5 cut(s) 48, 88, 241, 426, 446
AlwI GGATC 2 cut(s) 810, 823
AlwNI CAGNNNCTG 1 cut(s) 46
Aor51HI AGCGCT 1 cut(s) 380
AspLEI GCGC 3 cut(s) 278, 345, 381
AspS9I GGNCC 4 cut(s) 117, 635, 777, 913
AsuC2I CCSGG 2 cut(s) 258, 747
AsuHPI GGTGA 4 cut(s) 25, 121, 263, 886
AsuNHI GCTAGC 1 cut(s) 1207
AvaII GGWCC 2 cut(s) 777, 913
BalI TGGCCA 2 cut(s) 62, 282
BamHI GGATCC 1 cut(s) 815
BanI GGYRCC 2 cut(s) 342, 351
BanII GRGCYC 1 cut(s) 958
BbrPI CACGTG 1 cut(s) 251
BbsI GAAGAC 2 cut(s) 512, 1025
BbvCI CCTCAGC 1 cut(s) 1047
BccI CCATC 2 cut(s) 119, 865
BceAI ACGGC 6 cut(s) 67, 161, 218, 291, 330, 622
BcgI CGANNNNNNTGC 2 cut(s) 743, 777
BciT130I CCWGG 5 cut(s) 184, 217, 473, 591, 696
BciVI GTATCC 1 cut(s) 254
BcnI CCSGG 2 cut(s) 258, 747
BcoDI GTCTC 5 cut(s) 48, 88, 241, 426, 446
BfaI CTAG 2 cut(s) 1026, 1208
BfoI RGCGCY 2 cut(s) 346, 382
BfuI GTATCC 1 cut(s) 254
BglI GCCNNNNNGGC 4 cut(s) 312, 410, 563, 1130
BglII AGATCT 1 cut(s) 336
BisI GCNGC 9 cut(s) 6, 9, 12, 15, 163, 316, 405, 516, 1134
BlsI GCNGC 9 cut(s) 7, 10, 13, 16, 164, 317, 406, 517, 1135
Bme1390I CCNGG 7 cut(s) 184, 217, 258, 473, 591, 696, 747
Bme18I GGWCC 2 cut(s) 777, 913
BmgT120I GGNCC 4 cut(s) 117, 635, 777, 913
BmiI GGNNCC 6 cut(s) 289, 344, 353, 636, 817, 957
BmrFI CCNGG 7 cut(s) 184, 217, 258, 473, 591, 696, 747
BmrI ACTGGG 1 cut(s) 234
BmsI GCATC 2 cut(s) 544, 934
BmtI GCTAGC 1 cut(s) 1211
BmuI ACTGGG 1 cut(s) 234
BpiI GAAGAC 2 cut(s) 512, 1025
BplI GAGNNNNNCTC 4 cut(s) 494, 526, 1021, 1053
Bpu10I CCTNAGC 1 cut(s) 1047
BpuMI CCSGG 2 cut(s) 258, 747
BsaAI YACGTR 1 cut(s) 251
BsaHI GRCGYC 1 cut(s) 343
BsaJI CCNNGG 8 cut(s) 27, 216, 283, 307, 471, 510, 860, 1107
BsaWI WCCGGW 1 cut(s) 354
BsaXI ACNNNNNCTCC 2 cut(s) 188, 218
Bse118I RCCGGY 1 cut(s) 191
Bse1I ACTGG 2 cut(s) 40, 229
Bse3DI GCAATG 1 cut(s) 399
BseBI CCWGG 5 cut(s) 184, 217, 473, 591, 696
BseDI CCNNGG 8 cut(s) 27, 216, 283, 307, 471, 510, 860, 1107
BseGI GGATG 2 cut(s) 111, 949
BseMI GCAATG 1 cut(s) 399
BseMII CTCAG 4 cut(s) 825, 1038, 1044, 1179
BseNI ACTGG 2 cut(s) 40, 229
Bsh1236I CGCG 3 cut(s) 276, 386, 438
Bsh1285I CGRYCG 1 cut(s) 390
BshNI GGYRCC 2 cut(s) 342, 351
BsiEI CGRYCG 1 cut(s) 390
BsiSI CCGG 5 cut(s) 115, 192, 258, 355, 747
BslFI GGGAC 3 cut(s) 9, 280, 401
BsmAI GTCTC 5 cut(s) 48, 88, 241, 426, 446
BsmBI CGTCTC 3 cut(s) 88, 241, 426
BsmFI GGGAC 3 cut(s) 9, 280, 401
BsmI GAATGC 1 cut(s) 883
Bsp1286I GDGCHC 1 cut(s) 958
Bsp143I GATC 5 cut(s) 336, 537, 815, 883, 1161
BspCNI CTCAG 4 cut(s) 826, 1039, 1045, 1178
BspFNI CGCG 3 cut(s) 276, 386, 438
BspHI TCATGA 1 cut(s) 99
BspLI GGNNCC 6 cut(s) 289, 344, 353, 636, 817, 957
BspOI GCTAGC 1 cut(s) 1211
BspPI GGATC 2 cut(s) 810, 823
BspT107I GGYRCC 2 cut(s) 342, 351
BsrDI GCAATG 1 cut(s) 399
BsrFI RCCGGY 1 cut(s) 191
BsrI ACTGG 2 cut(s) 40, 229
BssAI RCCGGY 1 cut(s) 191
BssECI CCNNGG 8 cut(s) 27, 216, 283, 307, 471, 510, 860, 1107
BssMI GATC 5 cut(s) 336, 537, 815, 883, 1161
BssNI GRCGYC 1 cut(s) 343
BssT1I CCWWGG 3 cut(s) 27, 283, 1107
Bst2UI CCWGG 5 cut(s) 184, 217, 473, 591, 696
Bst4CI ACNGT 5 cut(s) 37, 82, 457, 629, 1172
Bst6I CTCTTC 3 cut(s) 839, 944, 1085
BstACI GRCGYC 1 cut(s) 343
BstBAI YACGTR 1 cut(s) 251
BstC8I GCNNGC 8 cut(s) 167, 193, 231, 280, 436, 440, 741, 1209
BstDEI CTNAG 6 cut(s) 725, 834, 1047, 1053, 1068, 1165
BstDSI CCRYGG 1 cut(s) 307
BstEII GGTNACC 1 cut(s) 31
BstF5I GGATG 2 cut(s) 111, 949
BstFNI CGCG 3 cut(s) 276, 386, 438
BstH2I RGCGCY 2 cut(s) 346, 382
BstHHI GCGC 3 cut(s) 278, 345, 381
BstKTI GATC 5 cut(s) 339, 540, 818, 886, 1164
BstMAI GTCTC 5 cut(s) 48, 88, 241, 426, 446
BstMBI GATC 5 cut(s) 336, 537, 815, 883, 1161
BstMCI CGRYCG 1 cut(s) 390
BstNI CCWGG 5 cut(s) 184, 217, 473, 591, 696
BstNSI RCATGY 2 cut(s) 304, 322
BstPI GGTNACC 1 cut(s) 31
BstSCI CCNGG 7 cut(s) 182, 215, 256, 471, 589, 694, 745
BstUI CGCG 3 cut(s) 276, 386, 438
BstV2I GAAGAC 2 cut(s) 512, 1025
BstX2I RGATCY 2 cut(s) 336, 815
BstYI RGATCY 2 cut(s) 336, 815
BsuI GTATCC 1 cut(s) 254
BtgI CCRYGG 1 cut(s) 307
BtsCI GGATG 2 cut(s) 111, 949
BtsIMutI CAGTG 1 cut(s) 1177
Cac8I GCNNGC 8 cut(s) 167, 193, 231, 280, 436, 440, 741, 1209
CaiI CAGNNNCTG 1 cut(s) 46
CciI TCATGA 1 cut(s) 99
CfoI GCGC 3 cut(s) 278, 345, 381
Cfr10I RCCGGY 1 cut(s) 191
Cfr13I GGNCC 4 cut(s) 117, 635, 777, 913
CseI GACGC 1 cut(s) 11
Csp6I GTAC 3 cut(s) 619, 649, 1150
CviAII CATG 5 cut(s) 58, 100, 301, 319, 1146
CviQI GTAC 3 cut(s) 619, 649, 1150
DdeI CTNAG 6 cut(s) 725, 834, 1047, 1053, 1068, 1165
DinI GGCGCC 1 cut(s) 344
DpnI GATC 5 cut(s) 338, 539, 817, 885, 1163
DpnII GATC 5 cut(s) 336, 537, 815, 883, 1161
EaeI YGGCCR 6 cut(s) 3, 60, 193, 280, 313, 396
Eam1104I CTCTTC 3 cut(s) 839, 944, 1085
EarI CTCTTC 3 cut(s) 839, 944, 1085
EciI GGCGGA 1 cut(s) 196
Eco130I CCWWGG 3 cut(s) 27, 283, 1107
Eco147I AGGCCT 1 cut(s) 107
Eco24I GRGCYC 1 cut(s) 958
Eco47I GGWCC 2 cut(s) 777, 913
Eco47III AGCGCT 1 cut(s) 380
Eco57I CTGAAG 2 cut(s) 542, 755
Eco72I CACGTG 1 cut(s) 251
Eco91I GGTNACC 1 cut(s) 31
EcoO65I GGTNACC 1 cut(s) 31
EcoRII CCWGG 5 cut(s) 182, 215, 471, 589, 694
EcoT14I CCWWGG 3 cut(s) 27, 283, 1107
EcoT38I GRGCYC 1 cut(s) 958
EgeI GGCGCC 1 cut(s) 344
EheI GGCGCC 1 cut(s) 344
ErhI CCWWGG 3 cut(s) 27, 283, 1107
Esp3I CGTCTC 3 cut(s) 88, 241, 426
FaeI CATG 5 cut(s) 61, 103, 304, 322, 1149
FaqI GGGAC 3 cut(s) 9, 280, 401
FatI CATG 5 cut(s) 57, 99, 300, 318, 1145
FauI CCCGC 1 cut(s) 431
FauNDI CATATG 1 cut(s) 1012
Fnu4HI GCNGC 9 cut(s) 6, 9, 12, 15, 163, 316, 405, 516, 1134
FokI GGATG 2 cut(s) 98, 956
FriOI GRGCYC 1 cut(s) 958
Fsp4HI GCNGC 9 cut(s) 6, 9, 12, 15, 163, 316, 405, 516, 1134
FspBI CTAG 2 cut(s) 1026, 1208
GlaI GCGC 3 cut(s) 277, 344, 380
GluI GCNGC 9 cut(s) 6, 9, 12, 15, 163, 316, 405, 516, 1134
HaeII RGCGCY 2 cut(s) 346, 382
HapII CCGG 5 cut(s) 115, 192, 258, 355, 747
HgaI GACGC 1 cut(s) 11
HhaI GCGC 3 cut(s) 278, 345, 381
Hin1I GRCGYC 1 cut(s) 343
Hin1II CATG 5 cut(s) 61, 103, 304, 322, 1149
Hin6I GCGC 3 cut(s) 276, 343, 379
HinP1I GCGC 3 cut(s) 276, 343, 379
HincII GTYRAC 2 cut(s) 370, 481
HindII GTYRAC 2 cut(s) 370, 481
HindIII AAGCTT 2 cut(s) 668, 737
HinfI GANTC 9 cut(s) 212, 268, 360, 485, 583, 610, 803, 982, 1006
HpaI GTTAAC 1 cut(s) 481
HpaII CCGG 5 cut(s) 115, 192, 258, 355, 747
HphI GGTGA 4 cut(s) 25, 121, 263, 886
Hpy166II GTNNAC 4 cut(s) 139, 370, 481, 649
Hpy188I TCNGA 7 cut(s) 296, 522, 615, 835, 907, 987, 1168
Hpy188III TCNNGA 5 cut(s) 47, 100, 461, 775, 916
Hpy8I GTNNAC 4 cut(s) 139, 370, 481, 649
HpyCH4III ACNGT 5 cut(s) 37, 82, 457, 629, 1172
HpyCH4IV ACGT 1 cut(s) 250
HpyF3I CTNAG 6 cut(s) 725, 834, 1047, 1053, 1068, 1165
HpySE526I ACGT 1 cut(s) 250
Hsp92I GRCGYC 1 cut(s) 343
Hsp92II CATG 5 cut(s) 61, 103, 304, 322, 1149
HspAI GCGC 3 cut(s) 276, 343, 379
KasI GGCGCC 1 cut(s) 342
KroI GCCGGC 1 cut(s) 191
KroNI GCCGGC 1 cut(s) 193
KspAI GTTAAC 1 cut(s) 481
Kzo9I GATC 5 cut(s) 336, 537, 815, 883, 1161
LmnI GCTCC 4 cut(s) 287, 331, 748, 961
LweI GCATC 2 cut(s) 544, 934
MaeI CTAG 2 cut(s) 1026, 1208
MaeII ACGT 1 cut(s) 250
MaeIII GTNAC 3 cut(s) 31, 127, 1172
MalI GATC 5 cut(s) 338, 539, 817, 885, 1163
MboI GATC 5 cut(s) 336, 537, 815, 883, 1161
MflI RGATCY 2 cut(s) 336, 815
MhlI GDGCHC 1 cut(s) 958
MlsI TGGCCA 2 cut(s) 62, 282
MluCI AATT 1 cut(s) 464
MluNI TGGCCA 2 cut(s) 62, 282
Mly113I GGCGCC 1 cut(s) 343
MlyI GAGTC 4 cut(s) 221, 262, 369, 479
MmeI TCCRAC 1 cut(s) 168
Mox20I TGGCCA 2 cut(s) 62, 282
MroNI GCCGGC 1 cut(s) 191
MscI TGGCCA 2 cut(s) 62, 282
MseI TTAA 5 cut(s) 480, 900, 936, 1062, 1128
Msp20I TGGCCA 2 cut(s) 62, 282
MspA1I CMGCKG 2 cut(s) 17, 1136
MspI CCGG 5 cut(s) 115, 192, 258, 355, 747
MspR9I CCNGG 7 cut(s) 184, 217, 258, 473, 591, 696, 747
Mva1269I GAATGC 1 cut(s) 883
MvaI CCWGG 5 cut(s) 184, 217, 473, 591, 696
MvnI CGCG 3 cut(s) 276, 386, 438
NaeI GCCGGC 1 cut(s) 193
NarI GGCGCC 1 cut(s) 343
NciI CCSGG 2 cut(s) 258, 747
NdeI CATATG 1 cut(s) 1012
NdeII GATC 5 cut(s) 336, 537, 815, 883, 1161
NgoMIV GCCGGC 1 cut(s) 191
NheI GCTAGC 1 cut(s) 1207
NlaIII CATG 5 cut(s) 61, 103, 304, 322, 1149
NlaIV GGNNCC 6 cut(s) 289, 344, 353, 636, 817, 957
NmeAIII GCCGAG 4 cut(s) 235, 491, 583, 885
NmuCI GTSAC 3 cut(s) 31, 127, 1172
NspI RCATGY 2 cut(s) 304, 322
PagI TCATGA 1 cut(s) 99
PceI AGGCCT 1 cut(s) 107
PciI ACATGT 1 cut(s) 300
PcsI WCGNNNNNNNCGW 3 cut(s) 132, 416, 555
PctI GAATGC 1 cut(s) 883
PdiI GCCGGC 1 cut(s) 193
PfeI GAWTC 5 cut(s) 583, 610, 803, 982, 1006
PflFI GACNNNGTC 3 cut(s) 125, 781, 911
PflMI CCANNNNNTGG 3 cut(s) 46, 339, 799
PfoI TCCNGGA 2 cut(s) 182, 256
PkrI GCNGC 9 cut(s) 7, 10, 13, 16, 164, 317, 406, 517, 1135
PleI GAGTC 4 cut(s) 220, 262, 368, 479
PluTI GGCGCC 1 cut(s) 346
PmaCI CACGTG 1 cut(s) 251
PmlI CACGTG 1 cut(s) 251
PpsI GAGTC 4 cut(s) 220, 262, 368, 479
Ppu21I YACGTR 1 cut(s) 251
PscI ACATGT 1 cut(s) 300
Psp6I CCWGG 5 cut(s) 182, 215, 471, 589, 694
PspCI CACGTG 1 cut(s) 251
PspEI GGTNACC 1 cut(s) 31
PspGI CCWGG 5 cut(s) 182, 215, 471, 589, 694
PspN4I GGNNCC 6 cut(s) 289, 344, 353, 636, 817, 957
PspPI GGNCC 4 cut(s) 117, 635, 777, 913
PstNI CAGNNNCTG 1 cut(s) 46
PsuI RGATCY 2 cut(s) 336, 815
PsyI GACNNNGTC 3 cut(s) 125, 781, 911
RsaI GTAC 3 cut(s) 620, 650, 1151
RsaNI GTAC 3 cut(s) 619, 649, 1150
SaqAI TTAA 5 cut(s) 480, 900, 936, 1062, 1128
SatI GCNGC 9 cut(s) 6, 9, 12, 15, 163, 316, 405, 516, 1134
Sau3AI GATC 5 cut(s) 336, 537, 815, 883, 1161
Sau96I GGNCC 4 cut(s) 117, 635, 777, 913
SchI GAGTC 4 cut(s) 221, 262, 369, 479
ScrFI CCNGG 7 cut(s) 184, 217, 258, 473, 591, 696, 747
SduI GDGCHC 1 cut(s) 958
SfaNI GCATC 2 cut(s) 544, 934
SfoI GGCGCC 1 cut(s) 344
SinI GGWCC 2 cut(s) 777, 913
Sse9I AATT 1 cut(s) 464
SseBI AGGCCT 1 cut(s) 107
SspDI GGCGCC 1 cut(s) 342
SspMI CTAG 2 cut(s) 1026, 1208
StuI AGGCCT 1 cut(s) 107
StyD4I CCNGG 7 cut(s) 182, 215, 256, 471, 589, 694, 745
StyI CCWWGG 3 cut(s) 27, 283, 1107
TaaI ACNGT 5 cut(s) 37, 82, 457, 629, 1172
TaiI ACGT 1 cut(s) 253
TaqI TCGA 7 cut(s) 581, 586, 702, 806, 822, 866, 1083
TasI AATT 1 cut(s) 464
TauI GCSGC 9 cut(s) 8, 11, 14, 17, 165, 318, 407, 518, 1136
TfiI GAWTC 5 cut(s) 583, 610, 803, 982, 1006
Tru1I TTAA 5 cut(s) 480, 900, 936, 1062, 1128
Tru9I TTAA 5 cut(s) 480, 900, 936, 1062, 1128
TscAI CASTG 1 cut(s) 1177
TseFI GTSAC 3 cut(s) 31, 127, 1172
Tsp45I GTSAC 3 cut(s) 31, 127, 1172
TspDTI ATGAA 2 cut(s) 116, 977
TspGWI ACGGA 1 cut(s) 666
TspRI CASTG 1 cut(s) 1177
Tth111I GACNNNGTC 3 cut(s) 125, 781, 911
Van91I CCANNNNNTGG 3 cut(s) 46, 339, 799
VpaK11BI GGWCC 2 cut(s) 777, 913
XceI RCATGY 2 cut(s) 304, 322
XspI CTAG 2 cut(s) 1026, 1208
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.