Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3B

Orthogroup ID

OG0011577

Physical Location & Seq

Genomic Coordinates Forward (+)

14294343 .. 14308599

Gene Structure 14257 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3BG166100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1005 bp

ATGCTAGATCTCAACCTCAACTTCTACACTCCCGAAATGGAGACCTCCGCCGCGAGCAGCTTCAACGACTCCTCCAACGACTCCTCCTCCTCCGCCACCCTCAACTTCCTCGACCTCCAAAACGACGTCGCCGCCCCCCCTTACGACGACGCCGATCATCATGACTACTTCGACGGCCGCACCATCCAGCTCTTCCCTCCTCAACCCCAGCCGCCCCTACGGTCCTCGACGACCAAGCAGTGGCTGGGGCTCTCCTCCGGCGGAGCACCGCAGCGTTACTCTGCTCCTCCTCCTCCTCCGCCGCTCGCGGAGCAGAGGATCGTGCCTCTCCCGGAGAAGGTCAAGAAGAGCCGCCGGGGACCGAGGTCCCGGAGCTCGCAGTATCGCGGCGTCACGTTTTATCGGAGGACCGGGAGATGGGAATCGCATATTTGGGATAATGGGAAGCAGGTGTACTTGGGTGGATTTGACACTGCGCATTCTGCAGCTAGGGCTTATGATCGAGCTGCGATAAAGTTCCGTGGAACTGAGGCTGATATTAATTTCAACGTTAGTGATTATGATGAGGATATTAAGCAGATGAGTAAATTTACAAAGGAAGAGTTTGTGCATATCCTGCGTCGCCAGAGCACCGGATTCGCCAGAGGAAGCTCGAAATACAGGGGAGTCACGCTGCACAAATGTGGCCGCTGGGAAGCTCGTATGGGCCAGTTGCTGGGCAAGAAAGCATATGACCAGGCTGCCATCAAATGCCATGGAAGGGAAGCGGTCACCAACTTTAATCCAAGCTTATATGATGGGGAGATAATGGCTGAGGCCAACAATGCAGGCATCGATGATAGTCTTGATCTAAACTTGGGAATTGCTCCCCCCTTGGCTTCTGACTGTCCGAATGAGAACATCAACTTGAGCAGCTTTCCTTTTCAGCTAGGCTGCAATGACAATCCTGTTAACATGACAGCAAGGGTAATGATCAGATCAATTAAAAACTCCACCCAGCTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003002 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009908 GO:0010073 GO:0010093 GO:0010154 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0035670 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048316 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048444 GO:0048449 GO:0048467 GO:0048481 GO:0048507 GO:0048608 GO:0048646 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0090701 GO:0099402 GO:0140110 GO:1903506 GO:1905392 GO:1905393 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2

Protein Analysis

334

Amino Acids

37.26

Weight (kDa)

7.69

Isoelectric Point (pI)

60.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AP2	PF00847	127 - 175	4.9e-11	AP2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0011577)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g15180 FvH4_6g15180
malus_domestica	MD04G1105200.v1.1 MD12G1125900.v1.1
prunus_persica	Prupe.6G242400_v2.0.a1 Prupe.6G242400_v2.0.a1
pyrus_communis	pycom04g10050 pycom12g12410
rosa_chinensis	RchiOBHm_Chr3g0468481 RchiOBHm_Chr3g0468491
rosa_laevigata	RLG00000024425
rosa_roxburghii	Rroxscaffold_6G00412720
rosa_rugosa	Rorug03G0095700 Rorug03G0095700 Rorug03G0095700
rosa_samantha	Rh3AG143600 Rh3AG144100 Rh3BG166100 Rh3DG165700
rosa_wichuraiana	Rw3G013600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	439
AatII	GACGTC	1 cut(s)	129
Acc16I	TGCGCA	1 cut(s)	477
Acc36I	ACCTGC	1 cut(s)	439
AccB7I	CCANNNNNTGG	2 cut(s)	240, 715
AccBSI	CCGCTC	1 cut(s)	304
AccII	CGCG	3 cut(s)	53, 308, 387
AclI	AACGTT	1 cut(s)	549
AclWI	GGATC	1 cut(s)	326
AcoI	YGGCCR	2 cut(s)	175, 685
AcsI	RAATTY	1 cut(s)	587
AcyI	GRCGYC	3 cut(s)	126, 150, 390
AfaI	GTAC	1 cut(s)	455
AfiI	CCNNNNNNNGG	5 cut(s)	240, 337, 417, 715, 760
AgsI	TTSAA	2 cut(s)	64, 547
AjnI	CCWGG	1 cut(s)	735
AleI	CACNNNNGTG	1 cut(s)	681
Alw21I	GWGCWC	3 cut(s)	268, 377, 632
Alw26I	GTCTC	1 cut(s)	35
AlwI	GGATC	1 cut(s)	326
AlwNI	CAGNNNCTG	2 cut(s)	244, 715
AoxI	GGCC	4 cut(s)	175, 685, 706, 816
ApeKI	GCWGC	8 cut(s)	57, 271, 485, 506, 673, 740, 912, 933
ApoI	RAATTY	1 cut(s)	587
AseI	ATTAAT	1 cut(s)	540
AspLEI	GCGC	1 cut(s)	478
AspS9I	GGNCC	5 cut(s)	222, 359, 366, 408, 706
AsuC2I	CCSGG	4 cut(s)	332, 356, 370, 412
AsuHPI	GGTGA	1 cut(s)	763
AvaII	GGWCC	4 cut(s)	222, 359, 366, 408
BanII	GRGCYC	2 cut(s)	252, 377
BarI	GAAGNNNNNNTAC	2 cut(s)	437, 469
Bbv12I	GWGCWC	3 cut(s)	268, 377, 632
BbvCI	CCTCAGC	1 cut(s)	813
BbvI	GCAGC	8 cut(s)	69, 283, 493, 497, 660, 727, 920, 924
BccI	CCATC	4 cut(s)	191, 411, 752, 791
BceAI	ACGGC	1 cut(s)	190
BcgI	CGANNNNNNTGC	2 cut(s)	619, 653
BciT130I	CCWGG	1 cut(s)	737
BclI	TGATCA	1 cut(s)	972
BcnI	CCSGG	4 cut(s)	332, 356, 370, 412
BcoDI	GTCTC	1 cut(s)	35
BfaI	CTAG	3 cut(s)	5, 489, 929
BfmI	CTRYAG	1 cut(s)	483
BfuAI	ACCTGC	1 cut(s)	439
BglII	AGATCT	1 cut(s)	7
Bme1390I	CCNGG	5 cut(s)	332, 356, 370, 412, 737
Bme18I	GGWCC	4 cut(s)	222, 359, 366, 408
BmgT120I	GGNCC	5 cut(s)	222, 359, 366, 408, 706
BmiI	GGNNCC	2 cut(s)	360, 368
BmrFI	CCNGG	5 cut(s)	332, 356, 370, 412, 737
BmsI	GCATC	1 cut(s)	840
BoxI	GACNNNNGTC	1 cut(s)	364
Bpu10I	CCTNAGC	1 cut(s)	813
BpuEI	CTTGAG	1 cut(s)	928
BpuMI	CCSGG	4 cut(s)	332, 356, 370, 412
Bsa29I	ATCGAT	1 cut(s)	834
BsaBI	GATNNNNATC	1 cut(s)	421
BsaHI	GRCGYC	3 cut(s)	126, 150, 390
BsaI	GGTCTC	1 cut(s)	35
BsaJI	CCNNGG	5 cut(s)	355, 362, 520, 754, 873
BsaWI	WCCGGW	1 cut(s)	632
BsaXI	ACNNNNNCTCC	6 cut(s)	56, 68, 71, 86, 98, 101
Bsc4I	CCNNNNNNNGG	5 cut(s)	240, 337, 417, 715, 760
Bse1I	ACTGG	1 cut(s)	709
Bse3DI	GCAATG	1 cut(s)	943
Bse8I	GATNNNNATC	1 cut(s)	421
BseBI	CCWGG	1 cut(s)	737
BseCI	ATCGAT	1 cut(s)	834
BseDI	CCNNGG	5 cut(s)	355, 362, 520, 754, 873
BseGI	GGATG	1 cut(s)	183
BseJI	GATNNNNATC	1 cut(s)	421
BseLI	CCNNNNNNNGG	5 cut(s)	240, 337, 417, 715, 760
BseMI	GCAATG	1 cut(s)	943
BseMII	CTCAG	2 cut(s)	519, 804
BseNI	ACTGG	1 cut(s)	709
BseX3I	CGGCCG	1 cut(s)	175
BseXI	GCAGC	8 cut(s)	69, 283, 493, 497, 660, 727, 920, 924
BseYI	CCCAGC	5 cut(s)	207, 244, 690, 715, 996
BsgI	GTGCAG	1 cut(s)	659
Bsh1236I	CGCG	3 cut(s)	53, 308, 387
Bsh1285I	CGRYCG	1 cut(s)	178
BshFI	GGCC	4 cut(s)	177, 687, 708, 818
BshVI	ATCGAT	1 cut(s)	834
BsiEI	CGRYCG	1 cut(s)	178
BsiHKAI	GWGCWC	3 cut(s)	268, 377, 632
BsiSI	CCGG	6 cut(s)	258, 332, 355, 370, 411, 633
BslFI	GGGAC	2 cut(s)	352, 372
BslI	CCNNNNNNNGG	5 cut(s)	240, 337, 417, 715, 760
BsmAI	GTCTC	1 cut(s)	35
BsmFI	GGGAC	2 cut(s)	352, 372
BsmI	GAATGC	1 cut(s)	478
BsnI	GGCC	4 cut(s)	177, 687, 708, 818
Bso31I	GGTCTC	1 cut(s)	35
Bsp1286I	GDGCHC	4 cut(s)	252, 268, 377, 632
Bsp143I	GATC	7 cut(s)	7, 154, 318, 499, 847, 972, 977
Bsp19I	CCATGG	1 cut(s)	754
BspANI	GGCC	4 cut(s)	177, 687, 708, 818
BspCNI	CTCAG	2 cut(s)	520, 805
BspDI	ATCGAT	1 cut(s)	834
BspFNI	CGCG	3 cut(s)	53, 308, 387
BspHI	TCATGA	1 cut(s)	160
BspLI	GGNNCC	2 cut(s)	360, 368
BspMAI	CTGCAG	1 cut(s)	487
BspMI	ACCTGC	1 cut(s)	439
BspPI	GGATC	1 cut(s)	326
BspQI	GCTCTTC	2 cut(s)	197, 341
BspTNI	GGTCTC	1 cut(s)	35
BsrBI	CCGCTC	1 cut(s)	304
BsrDI	GCAATG	1 cut(s)	943
BsrI	ACTGG	1 cut(s)	709
BssECI	CCNNGG	5 cut(s)	355, 362, 520, 754, 873
BssMI	GATC	7 cut(s)	7, 154, 318, 499, 847, 972, 977
BssNI	GRCGYC	3 cut(s)	126, 150, 390
BssT1I	CCWWGG	2 cut(s)	754, 873
Bst2UI	CCWGG	1 cut(s)	737
Bst4CI	ACNGT	2 cut(s)	222, 887
Bst6I	CTCTTC	3 cut(s)	197, 341, 594
BstACI	GRCGYC	3 cut(s)	126, 150, 390
BstAPI	GCANNNNNTGC	1 cut(s)	616
BstC8I	GCNNGC	4 cut(s)	55, 306, 377, 829
BstDEI	CTNAG	2 cut(s)	528, 813
BstDSI	CCRYGG	2 cut(s)	520, 754
BstEII	GGTNACC	1 cut(s)	769
BstF5I	GGATG	1 cut(s)	183
BstFNI	CGCG	3 cut(s)	53, 308, 387
BstHHI	GCGC	1 cut(s)	478
BstKTI	GATC	7 cut(s)	10, 157, 321, 502, 850, 975, 980
BstMAI	GTCTC	1 cut(s)	35
BstMBI	GATC	7 cut(s)	7, 154, 318, 499, 847, 972, 977
BstMCI	CGRYCG	1 cut(s)	178
BstMWI	GCNNNNNNNGC	5 cut(s)	310, 482, 491, 616, 824
BstNI	CCWGG	1 cut(s)	737
BstPAI	GACNNNNGTC	1 cut(s)	364
BstPI	GGTNACC	1 cut(s)	769
BstSCI	CCNGG	5 cut(s)	330, 354, 368, 410, 735
BstSFI	CTRYAG	1 cut(s)	483
BstUI	CGCG	3 cut(s)	53, 308, 387
BstV1I	GCAGC	8 cut(s)	69, 283, 493, 497, 660, 727, 920, 924
BstX2I	RGATCY	1 cut(s)	7
BstYI	RGATCY	1 cut(s)	7
BstZI	CGGCCG	1 cut(s)	175
Bsu15I	ATCGAT	1 cut(s)	834
BsuRI	GGCC	4 cut(s)	177, 687, 708, 818
BsuTUI	ATCGAT	1 cut(s)	834
BtgI	CCRYGG	2 cut(s)	520, 754
BtsCI	GGATG	1 cut(s)	183
BtsI	GCAGTG	2 cut(s)	245, 471
BtsIMutI	CAGTG	2 cut(s)	245, 471
BveI	ACCTGC	1 cut(s)	439
Cac8I	GCNNGC	4 cut(s)	55, 306, 377, 829
CaiI	CAGNNNCTG	2 cut(s)	244, 715
CciI	TCATGA	1 cut(s)	160
CfoI	GCGC	1 cut(s)	478
Cfr13I	GGNCC	5 cut(s)	222, 359, 366, 408, 706
ClaI	ATCGAT	1 cut(s)	834
CseI	GACGC	3 cut(s)	158, 379, 608
Csp6I	GTAC	1 cut(s)	454
CviAII	CATG	3 cut(s)	161, 755, 955
CviQI	GTAC	1 cut(s)	454
DdeI	CTNAG	2 cut(s)	528, 813
DpnI	GATC	7 cut(s)	9, 156, 320, 501, 849, 974, 979
DpnII	GATC	7 cut(s)	7, 154, 318, 499, 847, 972, 977
EaeI	YGGCCR	2 cut(s)	175, 685
EagI	CGGCCG	1 cut(s)	175
Eam1104I	CTCTTC	3 cut(s)	197, 341, 594
EarI	CTCTTC	3 cut(s)	197, 341, 594
EciI	GGCGGA	4 cut(s)	37, 82, 276, 288
Ecl136II	GAGCTC	1 cut(s)	375
EclXI	CGGCCG	1 cut(s)	175
Eco130I	CCWWGG	2 cut(s)	754, 873
Eco24I	GRGCYC	2 cut(s)	252, 377
Eco31I	GGTCTC	1 cut(s)	35
Eco47I	GGWCC	4 cut(s)	222, 359, 366, 408
Eco52I	CGGCCG	1 cut(s)	175
Eco53kI	GAGCTC	1 cut(s)	375
Eco91I	GGTNACC	1 cut(s)	769
EcoICRI	GAGCTC	1 cut(s)	375
EcoO109I	RGGNCCY	1 cut(s)	366
EcoO65I	GGTNACC	1 cut(s)	769
EcoRII	CCWGG	1 cut(s)	735
EcoT14I	CCWWGG	2 cut(s)	754, 873
EcoT38I	GRGCYC	2 cut(s)	252, 377
ErhI	CCWWGG	2 cut(s)	754, 873
FaeI	CATG	3 cut(s)	164, 758, 958
FaqI	GGGAC	2 cut(s)	352, 372
FatI	CATG	3 cut(s)	160, 754, 954
FauNDI	CATATG	1 cut(s)	730
FbaI	TGATCA	1 cut(s)	972
FokI	GGATG	1 cut(s)	170
FriOI	GRGCYC	2 cut(s)	252, 377
FspBI	CTAG	3 cut(s)	5, 489, 929
FspI	TGCGCA	1 cut(s)	477
GlaI	GCGC	1 cut(s)	477
GsaI	CCCAGC	5 cut(s)	211, 248, 694, 719, 1000
HaeIII	GGCC	4 cut(s)	177, 687, 708, 818
HapII	CCGG	6 cut(s)	258, 332, 355, 370, 411, 633
HgaI	GACGC	3 cut(s)	158, 379, 608
HhaI	GCGC	1 cut(s)	478
Hin1I	GRCGYC	3 cut(s)	126, 150, 390
Hin1II	CATG	3 cut(s)	164, 758, 958
Hin6I	GCGC	1 cut(s)	476
HinP1I	GCGC	1 cut(s)	476
HincII	GTYRAC	1 cut(s)	952
HindII	GTYRAC	1 cut(s)	952
HindIII	AAGCTT	1 cut(s)	787
HinfI	GANTC	5 cut(s)	68, 80, 422, 636, 666
HpaI	GTTAAC	1 cut(s)	952
HpaII	CCGG	6 cut(s)	258, 332, 355, 370, 411, 633
HphI	GGTGA	1 cut(s)	763
Hpy166II	GTNNAC	2 cut(s)	454, 952
Hpy188I	TCNGA	5 cut(s)	405, 883, 891, 977, 1004
Hpy188III	TCNNGA	4 cut(s)	32, 161, 343, 845
Hpy8I	GTNNAC	2 cut(s)	454, 952
Hpy99I	CGWCG	7 cut(s)	128, 131, 149, 152, 176, 232, 624
HpyAV	CCTTC	2 cut(s)	331, 753
HpyCH4III	ACNGT	2 cut(s)	222, 887
HpyCH4IV	ACGT	3 cut(s)	126, 395, 549
HpyCH4V	TGCA	5 cut(s)	485, 610, 676, 827, 936
HpyF10VI	GCNNNNNNNGC	5 cut(s)	310, 482, 491, 616, 824
HpyF3I	CTNAG	2 cut(s)	528, 813
HpySE526I	ACGT	3 cut(s)	126, 395, 549
Hsp92I	GRCGYC	3 cut(s)	126, 150, 390
Hsp92II	CATG	3 cut(s)	164, 758, 958
HspAI	GCGC	1 cut(s)	476
Ksp22I	TGATCA	1 cut(s)	972
KspAI	GTTAAC	1 cut(s)	952
Kzo9I	GATC	7 cut(s)	7, 154, 318, 499, 847, 972, 977
LguI	GCTCTTC	2 cut(s)	197, 341
LmnI	GCTCC	5 cut(s)	263, 289, 310, 372, 871
Lsp1109I	GCAGC	8 cut(s)	69, 283, 493, 497, 660, 727, 920, 924
LweI	GCATC	1 cut(s)	840
MaeI	CTAG	3 cut(s)	5, 489, 929
MaeII	ACGT	3 cut(s)	126, 395, 549
MaeIII	GTNAC	4 cut(s)	275, 391, 667, 769
MalI	GATC	7 cut(s)	9, 156, 320, 501, 849, 974, 979
MbiI	CCGCTC	1 cut(s)	304
MboI	GATC	7 cut(s)	7, 154, 318, 499, 847, 972, 977
MboII	GAAGA	3 cut(s)	184, 358, 611
MflI	RGATCY	1 cut(s)	7
MhlI	GDGCHC	4 cut(s)	252, 268, 377, 632
MluCI	AATT	4 cut(s)	541, 587, 861, 981
MlyI	GAGTC	3 cut(s)	62, 74, 675
MmeI	TCCRAC	1 cut(s)	99
MseI	TTAA	5 cut(s)	540, 573, 780, 951, 984
MslI	CAYNNNNRTG	1 cut(s)	681
MspA1I	CMGCKG	1 cut(s)	690
MspI	CCGG	6 cut(s)	258, 332, 355, 370, 411, 633
MspR9I	CCNGG	5 cut(s)	332, 356, 370, 412, 737
Mva1269I	GAATGC	1 cut(s)	478
MvaI	CCWGG	1 cut(s)	737
MvnI	CGCG	3 cut(s)	53, 308, 387
MwoI	GCNNNNNNNGC	5 cut(s)	310, 482, 491, 616, 824
NciI	CCSGG	4 cut(s)	332, 356, 370, 412
NcoI	CCATGG	1 cut(s)	754
NdeI	CATATG	1 cut(s)	730
NdeII	GATC	7 cut(s)	7, 154, 318, 499, 847, 972, 977
NlaIII	CATG	3 cut(s)	164, 758, 958
NlaIV	GGNNCC	2 cut(s)	360, 368
NmuCI	GTSAC	3 cut(s)	391, 667, 769
NsbI	TGCGCA	1 cut(s)	477
OliI	CACNNNNGTG	1 cut(s)	681
PagI	TCATGA	1 cut(s)	160
PaqCI	CACCTGC	1 cut(s)	439
PciSI	GCTCTTC	2 cut(s)	197, 341
PcsI	WCGNNNNNNNCGW	1 cut(s)	150
PctI	GAATGC	1 cut(s)	478
PfeI	GAWTC	2 cut(s)	422, 636
PflMI	CCANNNNNTGG	2 cut(s)	240, 715
PfoI	TCCNGGA	2 cut(s)	330, 368
PleI	GAGTC	3 cut(s)	62, 74, 674
PpsI	GAGTC	3 cut(s)	62, 74, 674
PpuMI	RGGWCCY	1 cut(s)	366
PshAI	GACNNNNGTC	1 cut(s)	364
PshBI	ATTAAT	1 cut(s)	540
Psp124BI	GAGCTC	1 cut(s)	377
Psp1406I	AACGTT	1 cut(s)	549
Psp5II	RGGWCCY	1 cut(s)	366
Psp6I	CCWGG	1 cut(s)	735
PspEI	GGTNACC	1 cut(s)	769
PspFI	CCCAGC	5 cut(s)	207, 244, 690, 715, 996
PspGI	CCWGG	1 cut(s)	735
PspN4I	GGNNCC	2 cut(s)	360, 368
PspPI	GGNCC	5 cut(s)	222, 359, 366, 408, 706
PspPPI	RGGWCCY	1 cut(s)	366
PstI	CTGCAG	1 cut(s)	487
PstNI	CAGNNNCTG	2 cut(s)	244, 715
PsuI	RGATCY	1 cut(s)	7
RsaI	GTAC	1 cut(s)	455
RsaNI	GTAC	1 cut(s)	454
RseI	CAYNNNNRTG	1 cut(s)	681
SacI	GAGCTC	1 cut(s)	377
SapI	GCTCTTC	2 cut(s)	197, 341
SaqAI	TTAA	5 cut(s)	540, 573, 780, 951, 984
Sau3AI	GATC	7 cut(s)	7, 154, 318, 499, 847, 972, 977
Sau96I	GGNCC	5 cut(s)	222, 359, 366, 408, 706
SchI	GAGTC	3 cut(s)	62, 74, 675
ScrFI	CCNGG	5 cut(s)	332, 356, 370, 412, 737
SduI	GDGCHC	4 cut(s)	252, 268, 377, 632
SfaNI	GCATC	1 cut(s)	840
SfcI	CTRYAG	1 cut(s)	483
SinI	GGWCC	4 cut(s)	222, 359, 366, 408
SmiMI	CAYNNNNRTG	1 cut(s)	681
SmlI	CTYRAG	1 cut(s)	907
SmoI	CTYRAG	1 cut(s)	907
Sse9I	AATT	4 cut(s)	541, 587, 861, 981
SspMI	CTAG	3 cut(s)	5, 489, 929
SstI	GAGCTC	1 cut(s)	377
StyD4I	CCNGG	5 cut(s)	330, 354, 368, 410, 735
StyI	CCWWGG	2 cut(s)	754, 873
TaaI	ACNGT	2 cut(s)	222, 887
TaiI	ACGT	3 cut(s)	129, 398, 552
TaqI	TCGA	6 cut(s)	111, 171, 227, 502, 653, 834
TaqII	GACCGA	1 cut(s)	376
TasI	AATT	4 cut(s)	541, 587, 861, 981
TatI	WGTACW	1 cut(s)	453
TauI	GCSGC	8 cut(s)	53, 134, 180, 214, 304, 354, 390, 690
TfiI	GAWTC	2 cut(s)	422, 636
Tru1I	TTAA	5 cut(s)	540, 573, 780, 951, 984
Tru9I	TTAA	5 cut(s)	540, 573, 780, 951, 984
TscAI	CASTG	2 cut(s)	245, 478
TseFI	GTSAC	3 cut(s)	391, 667, 769
TseI	GCWGC	8 cut(s)	57, 271, 485, 506, 673, 740, 912, 933
Tsp45I	GTSAC	3 cut(s)	391, 667, 769
TspGWI	ACGGA	1 cut(s)	509
TspRI	CASTG	2 cut(s)	245, 478
Van91I	CCANNNNNTGG	2 cut(s)	240, 715
VpaK11BI	GGWCC	4 cut(s)	222, 359, 366, 408
VspI	ATTAAT	1 cut(s)	540
XapI	RAATTY	1 cut(s)	587
XcmI	CCANNNNNNNNNTGG	1 cut(s)	241
XspI	CTAG	3 cut(s)	5, 489, 929
ZraI	GACGTC	1 cut(s)	127

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.