Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3A

Orthogroup ID

OG0011577

Physical Location & Seq

Genomic Coordinates Forward (+)

12737082 .. 12739789

Gene Structure 2708 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3AG144100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1383 bp

ATGCTAGATCTCAACCTCAACTTCTACACTCCCGAAATGGAGACCTCCGCCGCGAGCAGCTTCAACGACTCCTCCAACGACTCCGCCTCCTCCGCCACCCTCAACTTCCTCGACCTCCAAAACGACGACGCCGCCCCCGCTTACGACGACGCCGATCATCATAACTACTTTGACGGCCGCACCATCCAGCTCTTCCCTCCTCAACCCCAGCCCCTACGGTCCTCGACGACCAAGCAGTGGCTGGGGCTCTCCTCCGGCGGAGCACCGCAGCGTTACTCTGCTCCTCCTCCTCCTCCGCCGCTCGCGGAGCAGAGGATCGTGCCTCTCCCGGAGAAGGTCAAGAAGAGCCGCCGGGGACCGAGGTCCCGGAGCTCGCAGTATCGCGGCGTCACGTTTTATCGGAGGACCGGGAGATGGGAATCGCATATTTGGGATAATGGGAAGCAGGTGTACTTGGGTGGATTTGACACTGCGCATTCTGCAGCTAGGGCTTATGATCGAGCTGCGATAAAGTTCCGTGGAACTGAGGCTGATATTAATTTCAACGTTAGTGATTATGATGAGGATATTAAGCAGATGAGTAAATTTACAAAGGAAGAGTTTGTGCATATCCTGCGTCGCCAGAGCACCGGATTCGCCAGAGGAAGCTCGAAATACAGGGGAGTCACGCTGCACAAATGTGGCCGCTGGGAAGCTCGTATGGGCCAGTTGCTGGGCAAGAAGTATATATACCTTGGCCTATTTGATAGCGAGATTGAAGCTGCAAGAGCATATGACCAGGCTGCCATCAAATGCCATGGAAGGGAAGCGGTCACCAACTTTAATCCAAGCTTATATGATGGGGAGATAATGGCTGAGGCCAACAATGCAGGCATCGATGATAGTCTTGATCTAAACTTGGGAATTGCCCCCCCCTTGGCTTCTGACGGTCCGAATGAGAACATCAACTTGAGCAGCTTTCCTTTTCAGCTAGGCTGCAATGACAATCATGTTAACATGACAGCAAGGAATGAGAATTCTGTTCCAGGACTTCCAGCAACTATGAGGACTCATCTGCCTCATGGCTCAATGGTGGCATCTACAGAGCCTCCTCTAATGAGCAGCATGAACTCCAACTTCTTTCCCATCCATATGGAAAGAGCAATGGAGAAGAGTATGGATGCTAACTCCTTCCCTAACTGGGCATGGCAAATGCAAGTCCTTAATGATGGAGCAACTCCAGTGCCACTCTTCTCTGCGGCAGCATCATCAGGATTCCCTTCTTCAACAACAGAATCATCAGCTCCGATCCCTCCACTTCATTTTCCCAACGCATCATTTCTCCAGCGCCACTTTTCACCATCGTTCACCAACAAAACACCCCATTTCTATTGCAGGAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003002 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009908 GO:0010073 GO:0010093 GO:0010154 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0035670 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048316 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048444 GO:0048449 GO:0048467 GO:0048481 GO:0048507 GO:0048608 GO:0048646 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0090701 GO:0099402 GO:0140110 GO:1903506 GO:1905392 GO:1905393 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2

Protein Analysis

460

Amino Acids

51.1

Weight (kDa)

6.4

Isoelectric Point (pI)

59.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AP2	PF00847	126 - 174	7.7e-11	AP2 domain
AP2	PF00847	217 - 267	1.3e-09	AP2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011577)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g15180 FvH4_6g15180
malus_domestica	MD04G1105200.v1.1 MD12G1125900.v1.1
prunus_persica	Prupe.6G242400_v2.0.a1 Prupe.6G242400_v2.0.a1
pyrus_communis	pycom04g10050 pycom12g12410
rosa_chinensis	RchiOBHm_Chr3g0468481 RchiOBHm_Chr3g0468491
rosa_laevigata	RLG00000024425
rosa_roxburghii	Rroxscaffold_6G00412720
rosa_rugosa	Rorug03G0095700 Rorug03G0095700 Rorug03G0095700
rosa_samantha	Rh3AG143600 Rh3AG144100 Rh3BG166100 Rh3DG165700
rosa_wichuraiana	Rw3G013600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	436
Acc16I	TGCGCA	1 cut(s)	474
Acc36I	ACCTGC	1 cut(s)	436
AccB7I	CCANNNNNTGG	2 cut(s)	237, 712
AccBSI	CCGCTC	1 cut(s)	301
AccII	CGCG	3 cut(s)	53, 305, 384
AclI	AACGTT	1 cut(s)	546
AclWI	GGATC	2 cut(s)	323, 1282
AcoI	YGGCCR	2 cut(s)	175, 682
AcsI	RAATTY	2 cut(s)	584, 1015
AcyI	GRCGYC	3 cut(s)	129, 150, 387
AfaI	GTAC	1 cut(s)	452
AfiI	CCNNNNNNNGG	7 cut(s)	237, 334, 414, 712, 802, 916, 1180
AgsI	TTSAA	4 cut(s)	64, 544, 758, 1266
AjnI	CCWGG	2 cut(s)	777, 1024
AleI	CACNNNNGTG	1 cut(s)	678
Alw21I	GWGCWC	3 cut(s)	265, 374, 629
Alw26I	GTCTC	1 cut(s)	35
AlwI	GGATC	2 cut(s)	323, 1282
AlwNI	CAGNNNCTG	3 cut(s)	241, 712, 1380
AoxI	GGCC	5 cut(s)	175, 682, 703, 736, 858
ApoI	RAATTY	2 cut(s)	584, 1015
AseI	ATTAAT	1 cut(s)	537
AspLEI	GCGC	2 cut(s)	475, 1329
AspS9I	GGNCC	6 cut(s)	219, 356, 363, 405, 703, 929
AsuC2I	CCSGG	4 cut(s)	329, 353, 367, 409
AsuHPI	GGTGA	3 cut(s)	805, 1329, 1339
AvaII	GGWCC	5 cut(s)	219, 356, 363, 405, 929
BanII	GRGCYC	2 cut(s)	249, 374
BarI	GAAGNNNNNNTAC	4 cut(s)	434, 466, 713, 745
Bbv12I	GWGCWC	3 cut(s)	265, 374, 629
BbvCI	CCTCAGC	1 cut(s)	855
BccI	CCATC	7 cut(s)	191, 408, 794, 833, 1133, 1202, 1348
BceAI	ACGGC	1 cut(s)	190
BcgI	CGANNNNNNTGC	2 cut(s)	616, 650
BciT130I	CCWGG	2 cut(s)	779, 1026
BcnI	CCSGG	4 cut(s)	329, 353, 367, 409
BcoDI	GTCTC	1 cut(s)	35
BfaI	CTAG	3 cut(s)	5, 486, 971
BfmI	CTRYAG	2 cut(s)	480, 1080
BfoI	RGCGCY	1 cut(s)	1330
BfuAI	ACCTGC	1 cut(s)	436
BglII	AGATCT	1 cut(s)	7
Bme1390I	CCNGG	6 cut(s)	329, 353, 367, 409, 779, 1026
Bme18I	GGWCC	5 cut(s)	219, 356, 363, 405, 929
BmgT120I	GGNCC	6 cut(s)	219, 356, 363, 405, 703, 929
BmiI	GGNNCC	2 cut(s)	357, 365
BmrFI	CCNGG	6 cut(s)	329, 353, 367, 409, 779, 1026
BmrI	ACTGGG	1 cut(s)	1189
BmsI	GCATC	5 cut(s)	882, 1085, 1150, 1253, 1322
BmuI	ACTGGG	1 cut(s)	1189
BoxI	GACNNNNGTC	1 cut(s)	361
BpmI	CTGGAG	2 cut(s)	1203, 1307
Bpu10I	CCTNAGC	1 cut(s)	855
BpuEI	CTTGAG	1 cut(s)	970
BpuMI	CCSGG	4 cut(s)	329, 353, 367, 409
Bsa29I	ATCGAT	1 cut(s)	876
BsaBI	GATNNNNATC	1 cut(s)	418
BsaHI	GRCGYC	3 cut(s)	129, 150, 387
BsaI	GGTCTC	1 cut(s)	35
BsaJI	CCNNGG	6 cut(s)	352, 359, 517, 733, 796, 915
BsaWI	WCCGGW	1 cut(s)	629
BsaXI	ACNNNNNCTCC	6 cut(s)	56, 71, 86, 101, 1072, 1102
Bsc4I	CCNNNNNNNGG	7 cut(s)	237, 334, 414, 712, 802, 916, 1180
Bse1I	ACTGG	3 cut(s)	706, 1184, 1220
Bse3DI	GCAATG	2 cut(s)	985, 1149
Bse8I	GATNNNNATC	1 cut(s)	418
BseBI	CCWGG	2 cut(s)	779, 1026
BseCI	ATCGAT	1 cut(s)	876
BseDI	CCNNGG	6 cut(s)	352, 359, 517, 733, 796, 915
BseGI	GGATG	3 cut(s)	183, 1125, 1165
BseJI	GATNNNNATC	1 cut(s)	418
BseLI	CCNNNNNNNGG	7 cut(s)	237, 334, 414, 712, 802, 916, 1180
BseMI	GCAATG	2 cut(s)	985, 1149
BseMII	CTCAG	2 cut(s)	516, 846
BseNI	ACTGG	3 cut(s)	706, 1184, 1220
BseRI	GAGGAG	9 cut(s)	61, 79, 189, 241, 273, 276, 279, 282, 1080
BseX3I	CGGCCG	1 cut(s)	175
BseYI	CCCAGC	4 cut(s)	207, 241, 687, 712
BsgI	GTGCAG	1 cut(s)	656
Bsh1236I	CGCG	3 cut(s)	53, 305, 384
Bsh1285I	CGRYCG	1 cut(s)	178
BshFI	GGCC	5 cut(s)	177, 684, 705, 738, 860
BshVI	ATCGAT	1 cut(s)	876
BsiEI	CGRYCG	1 cut(s)	178
BsiHKAI	GWGCWC	3 cut(s)	265, 374, 629
BsiSI	CCGG	6 cut(s)	255, 329, 352, 367, 408, 630
BslFI	GGGAC	2 cut(s)	349, 369
BslI	CCNNNNNNNGG	7 cut(s)	237, 334, 414, 712, 802, 916, 1180
BsmAI	GTCTC	1 cut(s)	35
BsmFI	GGGAC	2 cut(s)	349, 369
BsmI	GAATGC	1 cut(s)	475
BsnI	GGCC	5 cut(s)	177, 684, 705, 738, 860
Bso31I	GGTCTC	1 cut(s)	35
Bsp1286I	GDGCHC	4 cut(s)	249, 265, 374, 629
Bsp143I	GATC	6 cut(s)	7, 154, 315, 496, 889, 1287
Bsp19I	CCATGG	1 cut(s)	796
BspANI	GGCC	5 cut(s)	177, 684, 705, 738, 860
BspCNI	CTCAG	2 cut(s)	517, 847
BspDI	ATCGAT	1 cut(s)	876
BspFNI	CGCG	3 cut(s)	53, 305, 384
BspLI	GGNNCC	2 cut(s)	357, 365
BspMAI	CTGCAG	1 cut(s)	484
BspMI	ACCTGC	1 cut(s)	436
BspPI	GGATC	2 cut(s)	323, 1282
BspQI	GCTCTTC	2 cut(s)	197, 338
BspTNI	GGTCTC	1 cut(s)	35
BsrBI	CCGCTC	1 cut(s)	301
BsrDI	GCAATG	2 cut(s)	985, 1149
BsrI	ACTGG	3 cut(s)	706, 1184, 1220
BssECI	CCNNGG	6 cut(s)	352, 359, 517, 733, 796, 915
BssMI	GATC	6 cut(s)	7, 154, 315, 496, 889, 1287
BssNI	GRCGYC	3 cut(s)	129, 150, 387
BssT1I	CCWWGG	3 cut(s)	733, 796, 915
Bst2UI	CCWGG	2 cut(s)	779, 1026
Bst4CI	ACNGT	2 cut(s)	219, 929
Bst6I	CTCTTC	5 cut(s)	197, 338, 591, 1145, 1235
BstACI	GRCGYC	3 cut(s)	129, 150, 387
BstAPI	GCANNNNNTGC	1 cut(s)	613
BstC8I	GCNNGC	4 cut(s)	55, 303, 374, 871
BstDEI	CTNAG	2 cut(s)	525, 855
BstDSI	CCRYGG	2 cut(s)	517, 796
BstEII	GGTNACC	1 cut(s)	811
BstF5I	GGATG	3 cut(s)	183, 1125, 1165
BstFNI	CGCG	3 cut(s)	53, 305, 384
BstH2I	RGCGCY	1 cut(s)	1330
BstHHI	GCGC	2 cut(s)	475, 1329
BstKTI	GATC	6 cut(s)	10, 157, 318, 499, 892, 1290
BstMAI	GTCTC	1 cut(s)	35
BstMBI	GATC	6 cut(s)	7, 154, 315, 496, 889, 1287
BstMCI	CGRYCG	1 cut(s)	178
BstMWI	GCNNNNNNNGC	8 cut(s)	92, 137, 307, 479, 488, 613, 767, 866
BstNI	CCWGG	2 cut(s)	779, 1026
BstPAI	GACNNNNGTC	1 cut(s)	361
BstPI	GGTNACC	1 cut(s)	811
BstSCI	CCNGG	6 cut(s)	327, 351, 365, 407, 777, 1024
BstSFI	CTRYAG	2 cut(s)	480, 1080
BstUI	CGCG	3 cut(s)	53, 305, 384
BstX2I	RGATCY	1 cut(s)	7
BstXI	CCANNNNNNTGG	1 cut(s)	1132
BstYI	RGATCY	1 cut(s)	7
BstZI	CGGCCG	1 cut(s)	175
Bsu15I	ATCGAT	1 cut(s)	876
BsuRI	GGCC	5 cut(s)	177, 684, 705, 738, 860
BsuTUI	ATCGAT	1 cut(s)	876
BtgI	CCRYGG	2 cut(s)	517, 796
BtsCI	GGATG	3 cut(s)	183, 1125, 1165
BtsI	GCAGTG	2 cut(s)	242, 468
BtsIMutI	CAGTG	3 cut(s)	242, 468, 1227
BveI	ACCTGC	1 cut(s)	436
Cac8I	GCNNGC	4 cut(s)	55, 303, 374, 871
CaiI	CAGNNNCTG	3 cut(s)	241, 712, 1380
CfoI	GCGC	2 cut(s)	475, 1329
Cfr13I	GGNCC	6 cut(s)	219, 356, 363, 405, 703, 929
ClaI	ATCGAT	1 cut(s)	876
CpoI	CGGWCCG	1 cut(s)	929
CseI	GACGC	4 cut(s)	137, 158, 376, 605
Csp6I	GTAC	1 cut(s)	451
CspI	CGGWCCG	1 cut(s)	929
CviAII	CATG	6 cut(s)	797, 989, 997, 1061, 1105, 1185
CviQI	GTAC	1 cut(s)	451
DdeI	CTNAG	2 cut(s)	525, 855
DpnI	GATC	6 cut(s)	9, 156, 317, 498, 891, 1289
DpnII	GATC	6 cut(s)	7, 154, 315, 496, 889, 1287
EaeI	YGGCCR	2 cut(s)	175, 682
EagI	CGGCCG	1 cut(s)	175
Eam1104I	CTCTTC	5 cut(s)	197, 338, 591, 1145, 1235
EarI	CTCTTC	5 cut(s)	197, 338, 591, 1145, 1235
EciI	GGCGGA	5 cut(s)	37, 73, 82, 273, 285
Ecl136II	GAGCTC	1 cut(s)	372
EclXI	CGGCCG	1 cut(s)	175
Eco130I	CCWWGG	3 cut(s)	733, 796, 915
Eco24I	GRGCYC	2 cut(s)	249, 374
Eco31I	GGTCTC	1 cut(s)	35
Eco47I	GGWCC	5 cut(s)	219, 356, 363, 405, 929
Eco52I	CGGCCG	1 cut(s)	175
Eco53kI	GAGCTC	1 cut(s)	372
Eco91I	GGTNACC	1 cut(s)	811
EcoICRI	GAGCTC	1 cut(s)	372
EcoO109I	RGGNCCY	1 cut(s)	363
EcoO65I	GGTNACC	1 cut(s)	811
EcoRI	GAATTC	1 cut(s)	1015
EcoRII	CCWGG	2 cut(s)	777, 1024
EcoT14I	CCWWGG	3 cut(s)	733, 796, 915
EcoT38I	GRGCYC	2 cut(s)	249, 374
ErhI	CCWWGG	3 cut(s)	733, 796, 915
FaeI	CATG	6 cut(s)	800, 992, 1000, 1064, 1108, 1188
FaqI	GGGAC	2 cut(s)	349, 369
FatI	CATG	6 cut(s)	796, 988, 996, 1060, 1104, 1184
FauI	CCCGC	1 cut(s)	145
FauNDI	CATATG	2 cut(s)	772, 1131
FokI	GGATG	3 cut(s)	170, 1112, 1172
FriOI	GRGCYC	2 cut(s)	249, 374
FspBI	CTAG	3 cut(s)	5, 486, 971
FspI	TGCGCA	1 cut(s)	474
GlaI	GCGC	2 cut(s)	474, 1328
GsaI	CCCAGC	4 cut(s)	211, 245, 691, 716
GsuI	CTGGAG	2 cut(s)	1203, 1307
HaeII	RGCGCY	1 cut(s)	1330
HaeIII	GGCC	5 cut(s)	177, 684, 705, 738, 860
HapII	CCGG	6 cut(s)	255, 329, 352, 367, 408, 630
HgaI	GACGC	4 cut(s)	137, 158, 376, 605
HhaI	GCGC	2 cut(s)	475, 1329
Hin1I	GRCGYC	3 cut(s)	129, 150, 387
Hin1II	CATG	6 cut(s)	800, 992, 1000, 1064, 1108, 1188
Hin6I	GCGC	2 cut(s)	473, 1327
HinP1I	GCGC	2 cut(s)	473, 1327
HincII	GTYRAC	1 cut(s)	994
HindII	GTYRAC	1 cut(s)	994
HindIII	AAGCTT	1 cut(s)	829
HinfI	GANTC	8 cut(s)	68, 80, 419, 633, 663, 1048, 1254, 1274
HpaI	GTTAAC	1 cut(s)	994
HpaII	CCGG	6 cut(s)	255, 329, 352, 367, 408, 630
HphI	GGTGA	3 cut(s)	805, 1329, 1339
Hpy166II	GTNNAC	3 cut(s)	451, 994, 1347
Hpy188I	TCNGA	4 cut(s)	402, 925, 933, 1287
Hpy188III	TCNNGA	4 cut(s)	32, 340, 887, 1251
Hpy8I	GTNNAC	3 cut(s)	451, 994, 1347
Hpy99I	CGWCG	6 cut(s)	128, 131, 149, 152, 229, 621
HpyAV	CCTTC	4 cut(s)	328, 795, 1180, 1269
HpyCH4III	ACNGT	2 cut(s)	219, 929
HpyCH4IV	ACGT	2 cut(s)	392, 546
HpyCH4V	TGCA	8 cut(s)	482, 607, 673, 764, 869, 978, 1195, 1374
HpyF10VI	GCNNNNNNNGC	8 cut(s)	92, 137, 307, 479, 488, 613, 767, 866
HpyF3I	CTNAG	2 cut(s)	525, 855
HpySE526I	ACGT	2 cut(s)	392, 546
Hsp92I	GRCGYC	3 cut(s)	129, 150, 387
Hsp92II	CATG	6 cut(s)	800, 992, 1000, 1064, 1108, 1188
HspAI	GCGC	2 cut(s)	473, 1327
KspAI	GTTAAC	1 cut(s)	994
Kzo9I	GATC	6 cut(s)	7, 154, 315, 496, 889, 1287
LguI	GCTCTTC	2 cut(s)	197, 338
LmnI	GCTCC	7 cut(s)	260, 286, 307, 369, 1211, 1288, 1377
LweI	GCATC	5 cut(s)	882, 1085, 1150, 1253, 1322
MaeI	CTAG	3 cut(s)	5, 486, 971
MaeII	ACGT	2 cut(s)	392, 546
MaeIII	GTNAC	4 cut(s)	272, 388, 664, 811
MalI	GATC	6 cut(s)	9, 156, 317, 498, 891, 1289
MbiI	CCGCTC	1 cut(s)	301
MboI	GATC	6 cut(s)	7, 154, 315, 496, 889, 1287
MboII	GAAGA	6 cut(s)	184, 355, 608, 1162, 1222, 1254
MflI	RGATCY	1 cut(s)	7
MhlI	GDGCHC	4 cut(s)	249, 265, 374, 629
MluCI	AATT	4 cut(s)	538, 584, 903, 1015
MlyI	GAGTC	4 cut(s)	62, 74, 672, 1042
MmeI	TCCRAC	2 cut(s)	99, 1137
MseI	TTAA	5 cut(s)	537, 570, 822, 993, 1203
MslI	CAYNNNNRTG	2 cut(s)	678, 1130
MspA1I	CMGCKG	1 cut(s)	687
MspI	CCGG	6 cut(s)	255, 329, 352, 367, 408, 630
MspR9I	CCNGG	6 cut(s)	329, 353, 367, 409, 779, 1026
Mva1269I	GAATGC	1 cut(s)	475
MvaI	CCWGG	2 cut(s)	779, 1026
MvnI	CGCG	3 cut(s)	53, 305, 384
MwoI	GCNNNNNNNGC	8 cut(s)	92, 137, 307, 479, 488, 613, 767, 866
NciI	CCSGG	4 cut(s)	329, 353, 367, 409
NcoI	CCATGG	1 cut(s)	796
NdeI	CATATG	2 cut(s)	772, 1131
NdeII	GATC	6 cut(s)	7, 154, 315, 496, 889, 1287
NlaIII	CATG	6 cut(s)	800, 992, 1000, 1064, 1108, 1188
NlaIV	GGNNCC	2 cut(s)	357, 365
NmuCI	GTSAC	3 cut(s)	388, 664, 811
NsbI	TGCGCA	1 cut(s)	474
OliI	CACNNNNGTG	1 cut(s)	678
PaqCI	CACCTGC	1 cut(s)	436
PciSI	GCTCTTC	2 cut(s)	197, 338
PcsI	WCGNNNNNNNCGW	1 cut(s)	150
PctI	GAATGC	1 cut(s)	475
PfeI	GAWTC	4 cut(s)	419, 633, 1254, 1274
PflMI	CCANNNNNTGG	2 cut(s)	237, 712
PfoI	TCCNGGA	3 cut(s)	327, 365, 1024
PleI	GAGTC	4 cut(s)	62, 74, 671, 1042
PpsI	GAGTC	4 cut(s)	62, 74, 671, 1042
PpuMI	RGGWCCY	1 cut(s)	363
PshAI	GACNNNNGTC	1 cut(s)	361
PshBI	ATTAAT	1 cut(s)	537
Psp124BI	GAGCTC	1 cut(s)	374
Psp1406I	AACGTT	1 cut(s)	546
Psp5II	RGGWCCY	1 cut(s)	363
Psp6I	CCWGG	2 cut(s)	777, 1024
PspEI	GGTNACC	1 cut(s)	811
PspFI	CCCAGC	4 cut(s)	207, 241, 687, 712
PspGI	CCWGG	2 cut(s)	777, 1024
PspN4I	GGNNCC	2 cut(s)	357, 365
PspPI	GGNCC	6 cut(s)	219, 356, 363, 405, 703, 929
PspPPI	RGGWCCY	1 cut(s)	363
PstI	CTGCAG	1 cut(s)	484
PstNI	CAGNNNCTG	3 cut(s)	241, 712, 1380
PsuI	RGATCY	1 cut(s)	7
RsaI	GTAC	1 cut(s)	452
RsaNI	GTAC	1 cut(s)	451
RseI	CAYNNNNRTG	2 cut(s)	678, 1130
Rsr2I	CGGWCCG	1 cut(s)	929
RsrII	CGGWCCG	1 cut(s)	929
SacI	GAGCTC	1 cut(s)	374
SapI	GCTCTTC	2 cut(s)	197, 338
SaqAI	TTAA	5 cut(s)	537, 570, 822, 993, 1203
Sau3AI	GATC	6 cut(s)	7, 154, 315, 496, 889, 1287
Sau96I	GGNCC	6 cut(s)	219, 356, 363, 405, 703, 929
SchI	GAGTC	4 cut(s)	62, 74, 672, 1042
ScrFI	CCNGG	6 cut(s)	329, 353, 367, 409, 779, 1026
SduI	GDGCHC	4 cut(s)	249, 265, 374, 629
SfaNI	GCATC	5 cut(s)	882, 1085, 1150, 1253, 1322
SfcI	CTRYAG	2 cut(s)	480, 1080
SinI	GGWCC	5 cut(s)	219, 356, 363, 405, 929
SmiMI	CAYNNNNRTG	2 cut(s)	678, 1130
SmlI	CTYRAG	1 cut(s)	949
SmoI	CTYRAG	1 cut(s)	949
Sse9I	AATT	4 cut(s)	538, 584, 903, 1015
SspMI	CTAG	3 cut(s)	5, 486, 971
SstI	GAGCTC	1 cut(s)	374
StyD4I	CCNGG	6 cut(s)	327, 351, 365, 407, 777, 1024
StyI	CCWWGG	3 cut(s)	733, 796, 915
TaaI	ACNGT	2 cut(s)	219, 929
TaiI	ACGT	2 cut(s)	395, 549
TaqI	TCGA	5 cut(s)	111, 224, 499, 650, 876
TaqII	GACCGA	1 cut(s)	373
TasI	AATT	4 cut(s)	538, 584, 903, 1015
TatI	WGTACW	1 cut(s)	450
TauI	GCSGC	8 cut(s)	53, 134, 180, 301, 351, 387, 687, 1241
TfiI	GAWTC	4 cut(s)	419, 633, 1254, 1274
Tru1I	TTAA	5 cut(s)	537, 570, 822, 993, 1203
Tru9I	TTAA	5 cut(s)	537, 570, 822, 993, 1203
TscAI	CASTG	3 cut(s)	242, 475, 1227
TseFI	GTSAC	3 cut(s)	388, 664, 811
Tsp45I	GTSAC	3 cut(s)	388, 664, 811
TspDTI	ATGAA	2 cut(s)	1121, 1289
TspGWI	ACGGA	1 cut(s)	506
TspRI	CASTG	3 cut(s)	242, 475, 1227
Van91I	CCANNNNNTGG	2 cut(s)	237, 712
VpaK11BI	GGWCC	5 cut(s)	219, 356, 363, 405, 929
VspI	ATTAAT	1 cut(s)	537
XapI	RAATTY	2 cut(s)	584, 1015
XcmI	CCANNNNNNNNNTGG	1 cut(s)	238
XspI	CTAG	3 cut(s)	5, 486, 971

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.