Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0007734

Physical Location & Seq

Genomic Coordinates Forward (+)

21502885 .. 21508183

Gene Structure 5299 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1129200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1845 bp

ATGAGCTCTAATTCGATTCCCGCCACTTCTTCGCAAGCAGAGGAGGAGATGGCTGGGGTAAAATTAGAGGAGTATTGCCTTGAGAATAAGCAATCCACGGCTGCATCGAGCTCGTCTGTATCCCAAGGCAGTGGCAGTGGCAGTGCTATTATCAAGTCCCCAGGGGCTTGCAGCCCAGCATCTGCTTCTCCAACTCAACGGACTAGTGGTCCTATTAGGCGAGCCAAAGGTGGTTGGACTCCACAAGAGGATGAGACATTACGGGTTGCCGTTGCAGCTTTTAAAGGGAAGAGTTGGAAGAAAATAGCTGAATTTTTTCCTGATAGATCGGAAGTGCAATGTCTGCATCGATGGCAGAAGGTTCTTAATCCAGAACTTGTTAAAGGACCCTGGACTCAAGAGGAGGATGATAAAATAATTGAACTGGTAGCAAGGTATGGACCTACAAAATGGTCGTTGATAGCAAAGTCTTTGCCTGGTCGTATAGGGAAACAATGCCGAGAGAGGTGGCACAATCACTTGAATCCTGATATAAAGAAGGAGGCTTGGACGTTGGAGGAGGAATTAGCTCTTATGAATGCCCACCAGATGCATGGGAACAAGTGGGCTGAAATAGCGAAGGTTTTACCTGGAAGGACAGATAACGCAATAAAGAATCATTGGAATAGTTCTTTGAAGAAAAAACTTGAGTTCTATTTGGCTACTGGGAAACTTCCACCACCTCCGAAGTATGGCACCAAAGAGACAAGAACCAGTGCAACTAAAAAATTACTTGTTTGTTCAACTAAAGGATCGGATTCAACTGCTCAAACATCATCTGGAAATGCAGACATGTCTAAGCTAGATGAAGATGGAAAGGATCAGTTTGAGTCTGCCGCCCCACCTCAGGATATGGGTGCTTCACCAAGTGTTCATCCAAATGAATCTGCAGATTCTGAAGGTGTAAAATGTAACCTGAGATTATCCTTTATGGATCTTAGCTGCTCTAACTCAGACTCGGGGCCAAAGTTTGAGAATTTCAGAGTAAACAGAATGCCTCAGATTGAGAATTCTGTCATTAACAGCCAGGCAGAGTCGGAGAATTGTGTATTTAACAATCAATTGGACGAAGACAGAGTTAAGACAACATCTTTGCCAGTTGAAACTCCAGGATATGGTTCTTTGTACTATGAGCCGCCACCACCAGAAAGTTGTGCCCAATTCGATTCAGGTTTTTCAAACATGCATCGCTTGCAGTATGATTACACCTCTAGTCCAAATTTATCACCTATAAGTTTCTTCACTCCTCCTTCTGCGAATGGCAGTGGTTTATGTAATCAAAGCCCTGAATCAATTTTGAAAATCGCTGCTAAGACCTTCCCCAATACTCCTTCCATTTTGCGAAAGAGAAAGACCATTGGCCAAGAACAATTGCCTCGTAATAAAGTTGCGATAGTGGATCTTGAATCAGGGATAGTGGATTGTGAATCAGTCAGGGAACAGGAGAGACACAAAAACAGTGCGGAAGTTTCTGGGTCTCAAGATGGAAGTTCATGCGAGAGTCCTACTAATAATGGTATCAGTACAATTGGGTCTAATGGCAAGGCTTTTAATGCATCTCCGCCATACCGGTTAAGAGCCAGGAGGACTGCTGTTTTCAAGTCCGTGGAGAAACAGCTGGAGTTTACATGTGACAAAGAGTATGATGCTAATTCTAAGTCCATGGAATTATCTGCAAATGGCGGTTCTGCTGTTATCAAAGACTCAACGCATCCAACAAAAATGGGAGGACAAAGAAGGGCGATTCTTTTGACGTTGGCTGACACTGTTGAACTGGTGATATTTCCAAGTCTACAGAGCTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001101 GO:0001134 GO:0001135 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0006950 GO:0008150 GO:0008285 GO:0009266 GO:0009409 GO:0009628 GO:0009719 GO:0009723 GO:0009725 GO:0009751 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010564 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0014070 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0032465 GO:0032502 GO:0042127 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0046677 GO:0047484 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0048585 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0051302 GO:0051726 GO:0060255 GO:0065007 GO:0080090 GO:0080134 GO:0097159 GO:0140110 GO:1901000 GO:1901002 GO:1901181 GO:1901363 GO:1901700 GO:1902584 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:2000070 GO:2000112 GO:2000113 GO:2001023 GO:2001024 GO:2001038 GO:2001039 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-binding

Protein Analysis

615

Amino Acids

67.16

Weight (kDa)

7.5

Isoelectric Point (pI)

56.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-binding	PF00249	76 - 122	1.7e-13	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	79 - 135	6.8e-14	Myb-like DNA-binding domain
Myb_DNA-binding	PF00249	128 - 174	5.1e-20	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	131 - 190	1.3e-19	Myb-like DNA-binding domain
Myb_DNA-binding	PF00249	180 - 223	9.9e-18	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	183 - 229	1.9e-09	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007734)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G02320 AT5G02320 AT5G02320
fragaria_vesca	FvH4_6g13670 FvH4_6g13670 FvH4_6g13670 FvH4_6g13670
malus_domestica	MD04G1129200.v1.1 MD12G1141900.v1.1
prunus_persica	Prupe.6G255400_v2.0.a1 Prupe.6G255400_v2.0.a1
pyrus_communis	pycom04g11740 pycom12g13660
rosa_chinensis	RchiOBHm_Chr3g0466541
rosa_laevigata	RLG00000024564
rosa_multiflora	Rmu_sc0003332.1_g000004
rosa_roxburghii	Rroxscaffold_6G00414390
rosa_rugosa	Rorug03G0082300 Rorug03G0082400
rosa_samantha	Rh3AG129400 Rh3BG150700 Rh3CG150500 Rh3DG151400
rosa_wichuraiana	Rw3G012230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	734
AccB7I	CCANNNNNTGG	1 cut(s)	1154
AccI	GTMKAC	1 cut(s)	1831
AciI	CCGC	6 cut(s)	21, 876, 1175, 1502, 1601, 1722
AclWI	GGATC	4 cut(s)	799, 867, 981, 1446
AcoI	YGGCCR	1 cut(s)	1399
AcsI	RAATTY	4 cut(s)	311, 1015, 1048, 1258
AcuI	CTGAAG	1 cut(s)	957
AdeI	CACNNNGTG	1 cut(s)	908
AfaI	GTAC	2 cut(s)	1166, 1564
AfiI	CCNNNNNNNGG	3 cut(s)	731, 886, 1154
AflIII	ACRYGT	2 cut(s)	831, 1667
AgeI	ACCGGT	1 cut(s)	1608
AhdI	GACNNNNNGTC	1 cut(s)	207
AhlI	ACTAGT	1 cut(s)	203
AjnI	CCWGG	7 cut(s)	160, 389, 475, 628, 1065, 1147, 1619
AluBI	AGCT	9 cut(s)	6, 111, 278, 308, 569, 841, 981, 1657, 1839
AluI	AGCT	9 cut(s)	6, 111, 278, 308, 569, 841, 981, 1657, 1839
Alw21I	GWGCWC	2 cut(s)	8, 113
Alw26I	GTCTC	4 cut(s)	248, 737, 1480, 1521
AlwI	GGATC	4 cut(s)	799, 867, 981, 1446
AlwNI	CAGNNNCTG	2 cut(s)	182, 935
Ama87I	CYCGRG	1 cut(s)	997
AoxI	GGCC	2 cut(s)	1001, 1399
ApeKI	GCWGC	5 cut(s)	101, 171, 275, 981, 1346
ApoI	RAATTY	4 cut(s)	311, 1015, 1048, 1258
ArsI	GACNNNNNNTTYG	2 cut(s)	1114, 1146
AsiGI	ACCGGT	1 cut(s)	1608
Asp700I	GAANNNNTTC	1 cut(s)	315
AspS9I	GGNCC	4 cut(s)	209, 386, 440, 1001
AsuHPI	GGTGA	3 cut(s)	894, 1257, 1828
AvaI	CYCGRG	1 cut(s)	997
AvaII	GGWCC	3 cut(s)	209, 386, 440
AxyI	CCTNAGG	1 cut(s)	885
BaeGI	GKGCMC	1 cut(s)	1198
BalI	TGGCCA	1 cut(s)	1401
BanI	GGYRCC	1 cut(s)	734
BanII	GRGCYC	2 cut(s)	8, 113
BbsI	GAAGAC	1 cut(s)	1116
Bbv12I	GWGCWC	2 cut(s)	8, 113
BbvI	GCAGC	5 cut(s)	88, 183, 287, 968, 1333
BccI	CCATC	4 cut(s)	43, 345, 845, 1517
BceAI	ACGGC	2 cut(s)	114, 254
BcgI	CGANNNNNNTGC	2 cut(s)	93, 127
BciT130I	CCWGG	7 cut(s)	162, 391, 477, 630, 1067, 1149, 1621
BciVI	GTATCC	1 cut(s)	130
BcoDI	GTCTC	4 cut(s)	248, 737, 1480, 1521
BcuI	ACTAGT	1 cut(s)	203
BfaI	CTAG	3 cut(s)	204, 842, 1251
BfmI	CTRYAG	2 cut(s)	927, 1832
BfuI	GTATCC	1 cut(s)	130
BisI	GCNGC	7 cut(s)	102, 172, 276, 876, 982, 1175, 1347
BlsI	GCNGC	7 cut(s)	103, 173, 277, 877, 983, 1176, 1348
Bme1390I	CCNGG	7 cut(s)	162, 391, 477, 630, 1067, 1149, 1621
Bme18I	GGWCC	3 cut(s)	209, 386, 440
BmeRI	GACNNNNNGTC	1 cut(s)	207
BmeT110I	CYCGRG	1 cut(s)	997
BmgT120I	GGNCC	4 cut(s)	209, 386, 440, 1001
BmiI	GGNNCC	3 cut(s)	388, 736, 1002
BmrFI	CCNGG	7 cut(s)	162, 391, 477, 630, 1067, 1149, 1621
BmrI	ACTGGG	1 cut(s)	714
BmsI	GCATC	8 cut(s)	113, 188, 355, 579, 1234, 1604, 1675, 1759
BmuI	ACTGGG	1 cut(s)	714
BpiI	GAAGAC	1 cut(s)	1116
BpmI	CTGGAG	2 cut(s)	1131, 1679
BpuEI	CTTGAG	4 cut(s)	101, 381, 707, 1503
Bsa29I	ATCGAT	1 cut(s)	349
BsaI	GGTCTC	1 cut(s)	1521
BsaJI	CCNNGG	7 cut(s)	96, 124, 160, 161, 389, 1644, 1701
BsaWI	WCCGGW	1 cut(s)	1608
Bsc4I	CCNNNNNNNGG	3 cut(s)	731, 886, 1154
Bse118I	RCCGGY	1 cut(s)	1608
Bse1I	ACTGG	5 cut(s)	429, 709, 753, 1136, 1818
Bse21I	CCTNAGG	1 cut(s)	885
Bse3DI	GCAATG	1 cut(s)	344
BseBI	CCWGG	7 cut(s)	162, 391, 477, 630, 1067, 1149, 1621
BseCI	ATCGAT	1 cut(s)	349
BseDI	CCNNGG	7 cut(s)	96, 124, 160, 161, 389, 1644, 1701
BseGI	GGATG	4 cut(s)	256, 412, 913, 1750
BseLI	CCNNNNNNNGG	3 cut(s)	731, 886, 1154
BseMI	GCAATG	1 cut(s)	344
BseMII	CTCAG	4 cut(s)	899, 947, 1005, 1052
BseNI	ACTGG	5 cut(s)	429, 709, 753, 1136, 1818
BseRI	GAGGAG	6 cut(s)	56, 59, 83, 416, 572, 1275
BseSI	GKGCMC	1 cut(s)	1198
BseXI	GCAGC	5 cut(s)	88, 183, 287, 968, 1333
BseYI	CCCAGC	2 cut(s)	53, 175
BshFI	GGCC	2 cut(s)	1003, 1401
BshNI	GGYRCC	1 cut(s)	734
BshTI	ACCGGT	1 cut(s)	1608
BshVI	ATCGAT	1 cut(s)	349
BsiHKAI	GWGCWC	2 cut(s)	8, 113
BsiHKCI	CYCGRG	1 cut(s)	997
BsiSI	CCGG	1 cut(s)	1609
BslFI	GGGAC	1 cut(s)	142
BslI	CCNNNNNNNGG	3 cut(s)	731, 886, 1154
BsmAI	GTCTC	4 cut(s)	248, 737, 1480, 1521
BsmFI	GGGAC	1 cut(s)	142
BsmI	GAATGC	2 cut(s)	583, 1038
BsnI	GGCC	2 cut(s)	1003, 1401
Bso31I	GGTCTC	1 cut(s)	1521
BsoBI	CYCGRG	1 cut(s)	997
Bsp1286I	GDGCHC	3 cut(s)	8, 113, 1198
Bsp143I	GATC	5 cut(s)	326, 791, 859, 973, 1438
Bsp19I	CCATGG	1 cut(s)	1701
BspACI	CCGC	6 cut(s)	21, 876, 1175, 1502, 1601, 1722
BspANI	GGCC	2 cut(s)	1003, 1401
BspCNI	CTCAG	4 cut(s)	898, 948, 1004, 1051
BspDI	ATCGAT	1 cut(s)	349
BspLI	GGNNCC	3 cut(s)	388, 736, 1002
BspMAI	CTGCAG	1 cut(s)	931
BspPI	GGATC	4 cut(s)	799, 867, 981, 1446
BspT107I	GGYRCC	1 cut(s)	734
BspTNI	GGTCTC	1 cut(s)	1521
BsrDI	GCAATG	1 cut(s)	344
BsrFI	RCCGGY	1 cut(s)	1608
BsrI	ACTGG	5 cut(s)	429, 709, 753, 1136, 1818
BssAI	RCCGGY	1 cut(s)	1608
BssECI	CCNNGG	7 cut(s)	96, 124, 160, 161, 389, 1644, 1701
BssMI	GATC	5 cut(s)	326, 791, 859, 973, 1438
BssT1I	CCWWGG	2 cut(s)	124, 1701
Bst2UI	CCWGG	7 cut(s)	162, 391, 477, 630, 1067, 1149, 1621
Bst4CI	ACNGT	2 cut(s)	1499, 1807
Bst6I	CTCTTC	1 cut(s)	284
BstAPI	GCANNNNNTGC	2 cut(s)	343, 1231
BstC8I	GCNNGC	4 cut(s)	36, 169, 222, 1232
BstDEI	CTNAG	8 cut(s)	837, 885, 956, 977, 991, 1038, 1350, 1695
BstDSI	CCRYGG	3 cut(s)	96, 1644, 1701
BstF5I	GGATG	4 cut(s)	256, 412, 913, 1750
BstKTI	GATC	5 cut(s)	329, 794, 862, 976, 1441
BstMAI	GTCTC	4 cut(s)	248, 737, 1480, 1521
BstMBI	GATC	5 cut(s)	326, 791, 859, 973, 1438
BstMWI	GCNNNNNNNGC	6 cut(s)	275, 343, 352, 614, 1231, 1592
BstNI	CCWGG	7 cut(s)	162, 391, 477, 630, 1067, 1149, 1621
BstNSI	RCATGY	3 cut(s)	835, 1225, 1671
BstSCI	CCNGG	7 cut(s)	160, 389, 475, 628, 1065, 1147, 1619
BstSFI	CTRYAG	2 cut(s)	927, 1832
BstSLI	GKGCMC	1 cut(s)	1198
BstV1I	GCAGC	5 cut(s)	88, 183, 287, 968, 1333
BstV2I	GAAGAC	1 cut(s)	1116
BstX2I	RGATCY	2 cut(s)	973, 1438
BstXI	CCANNNNNNTGG	2 cut(s)	131, 593
BstYI	RGATCY	2 cut(s)	973, 1438
Bsu15I	ATCGAT	1 cut(s)	349
Bsu36I	CCTNAGG	1 cut(s)	885
BsuI	GTATCC	1 cut(s)	130
BsuRI	GGCC	2 cut(s)	1003, 1401
BsuTUI	ATCGAT	1 cut(s)	349
BtgI	CCRYGG	3 cut(s)	96, 1644, 1701
BtgZI	GCGATG	1 cut(s)	1211
BtsCI	GGATG	4 cut(s)	256, 412, 913, 1750
BtsI	GCAGTG	4 cut(s)	136, 142, 148, 1309
BtsIMutI	CAGTG	7 cut(s)	136, 142, 148, 760, 1309, 1504, 1803
Cac8I	GCNNGC	4 cut(s)	36, 169, 222, 1232
CaiI	CAGNNNCTG	2 cut(s)	182, 935
Cfr10I	RCCGGY	1 cut(s)	1608
Cfr13I	GGNCC	4 cut(s)	209, 386, 440, 1001
ClaI	ATCGAT	1 cut(s)	349
Csp6I	GTAC	2 cut(s)	1165, 1563
CspAI	ACCGGT	1 cut(s)	1608
CviAII	CATG	6 cut(s)	593, 832, 1222, 1533, 1668, 1702
CviQI	GTAC	2 cut(s)	1165, 1563
DdeI	CTNAG	8 cut(s)	837, 885, 956, 977, 991, 1038, 1350, 1695
DpnI	GATC	5 cut(s)	328, 793, 861, 975, 1440
DpnII	GATC	5 cut(s)	326, 791, 859, 973, 1438
DraI	TTTAAA	1 cut(s)	283
DraIII	CACNNNGTG	1 cut(s)	908
DriI	GACNNNNNGTC	1 cut(s)	207
EaeI	YGGCCR	1 cut(s)	1399
Eam1104I	CTCTTC	1 cut(s)	284
Eam1105I	GACNNNNNGTC	1 cut(s)	207
EarI	CTCTTC	1 cut(s)	284
EciI	GGCGGA	1 cut(s)	1590
Ecl136II	GAGCTC	2 cut(s)	6, 111
Eco130I	CCWWGG	2 cut(s)	124, 1701
Eco24I	GRGCYC	2 cut(s)	8, 113
Eco31I	GGTCTC	1 cut(s)	1521
Eco47I	GGWCC	3 cut(s)	209, 386, 440
Eco53kI	GAGCTC	2 cut(s)	6, 111
Eco57I	CTGAAG	1 cut(s)	957
Eco81I	CCTNAGG	1 cut(s)	885
Eco88I	CYCGRG	1 cut(s)	997
EcoICRI	GAGCTC	2 cut(s)	6, 111
EcoO109I	RGGNCCY	1 cut(s)	386
EcoRI	GAATTC	1 cut(s)	1048
EcoRII	CCWGG	7 cut(s)	160, 389, 475, 628, 1065, 1147, 1619
EcoT14I	CCWWGG	2 cut(s)	124, 1701
EcoT22I	ATGCAT	3 cut(s)	594, 1227, 1597
EcoT38I	GRGCYC	2 cut(s)	8, 113
ErhI	CCWWGG	2 cut(s)	124, 1701
FaeI	CATG	6 cut(s)	596, 835, 1225, 1536, 1671, 1705
FaqI	GGGAC	1 cut(s)	142
FatI	CATG	6 cut(s)	592, 831, 1221, 1532, 1667, 1701
FauI	CCCGC	1 cut(s)	28
FblI	GTMKAC	1 cut(s)	1831
Fnu4HI	GCNGC	7 cut(s)	102, 172, 276, 876, 982, 1175, 1347
FokI	GGATG	4 cut(s)	263, 419, 900, 1737
FriOI	GRGCYC	2 cut(s)	8, 113
Fsp4HI	GCNGC	7 cut(s)	102, 172, 276, 876, 982, 1175, 1347
FspBI	CTAG	3 cut(s)	204, 842, 1251
GluI	GCNGC	7 cut(s)	102, 172, 276, 876, 982, 1175, 1347
GsaI	CCCAGC	2 cut(s)	57, 179
GsuI	CTGGAG	2 cut(s)	1131, 1679
HaeIII	GGCC	2 cut(s)	1003, 1401
HapII	CCGG	1 cut(s)	1609
Hin1II	CATG	6 cut(s)	596, 835, 1225, 1536, 1671, 1705
HpaII	CCGG	1 cut(s)	1609
HphI	GGTGA	3 cut(s)	894, 1257, 1828
Hpy166II	GTNNAC	3 cut(s)	1027, 1665, 1832
Hpy188I	TCNGA	9 cut(s)	331, 726, 796, 937, 994, 1022, 1041, 1078, 1844
Hpy188III	TCNNGA	8 cut(s)	320, 371, 398, 527, 819, 887, 1442, 1520
Hpy8I	GTNNAC	3 cut(s)	1027, 1665, 1832
HpyAV	CCTTC	9 cut(s)	352, 532, 613, 627, 932, 1299, 1366, 1380, 1770
HpyCH4III	ACNGT	2 cut(s)	1499, 1807
HpyCH4IV	ACGT	2 cut(s)	551, 1793
HpyF10VI	GCNNNNNNNGC	6 cut(s)	275, 343, 352, 614, 1231, 1592
HpyF3I	CTNAG	8 cut(s)	837, 885, 956, 977, 991, 1038, 1350, 1695
HpySE526I	ACGT	2 cut(s)	551, 1793
Hsp92II	CATG	6 cut(s)	596, 835, 1225, 1536, 1671, 1705
Kzo9I	GATC	5 cut(s)	326, 791, 859, 973, 1438
Lsp1109I	GCAGC	5 cut(s)	88, 183, 287, 968, 1333
LweI	GCATC	8 cut(s)	113, 188, 355, 579, 1234, 1604, 1675, 1759
MaeI	CTAG	3 cut(s)	204, 842, 1251
MaeII	ACGT	2 cut(s)	551, 1793
MaeIII	GTNAC	2 cut(s)	950, 1670
MalI	GATC	5 cut(s)	328, 793, 861, 975, 1440
MboI	GATC	5 cut(s)	326, 791, 859, 973, 1438
MboII	GAAGA	7 cut(s)	21, 301, 310, 688, 860, 1121, 1270
MfeI	CAATTG	3 cut(s)	1100, 1409, 1566
MflI	RGATCY	2 cut(s)	973, 1438
MhlI	GDGCHC	3 cut(s)	8, 113, 1198
MlsI	TGGCCA	1 cut(s)	1401
MluNI	TGGCCA	1 cut(s)	1401
MlyI	GAGTC	7 cut(s)	232, 388, 878, 989, 1082, 1549, 1736
MmeI	TCCRAC	6 cut(s)	215, 215, 275, 534, 1056, 1778
Mox20I	TGGCCA	1 cut(s)	1401
Mph1103I	ATGCAT	3 cut(s)	594, 1227, 1597
MroXI	GAANNNNTTC	1 cut(s)	315
MscI	TGGCCA	1 cut(s)	1401
MseI	TTAA	8 cut(s)	282, 366, 381, 1059, 1092, 1119, 1590, 1613
MslI	CAYNNNNRTG	1 cut(s)	918
Msp20I	TGGCCA	1 cut(s)	1401
MspA1I	CMGCKG	1 cut(s)	1657
MspI	CCGG	1 cut(s)	1609
MspR9I	CCNGG	7 cut(s)	162, 391, 477, 630, 1067, 1149, 1621
MunI	CAATTG	3 cut(s)	1100, 1409, 1566
Mva1269I	GAATGC	2 cut(s)	583, 1038
MvaI	CCWGG	7 cut(s)	162, 391, 477, 630, 1067, 1149, 1621
MwoI	GCNNNNNNNGC	6 cut(s)	275, 343, 352, 614, 1231, 1592
NcoI	CCATGG	1 cut(s)	1701
NdeII	GATC	5 cut(s)	326, 791, 859, 973, 1438
NlaIII	CATG	6 cut(s)	596, 835, 1225, 1536, 1671, 1705
NlaIV	GGNNCC	3 cut(s)	388, 736, 1002
NmeAIII	GCCGAG	1 cut(s)	524
NmuCI	GTSAC	1 cut(s)	1670
NsiI	ATGCAT	3 cut(s)	594, 1227, 1597
NspI	RCATGY	3 cut(s)	835, 1225, 1671
PasI	CCCWGGG	1 cut(s)	161
PciI	ACATGT	2 cut(s)	831, 1667
PcsI	WCGNNNNNNNCGW	1 cut(s)	104
PctI	GAATGC	2 cut(s)	583, 1038
PdmI	GAANNNNTTC	1 cut(s)	315
PflMI	CCANNNNNTGG	1 cut(s)	1154
PfoI	TCCNGGA	1 cut(s)	1147
PinAI	ACCGGT	1 cut(s)	1608
PkrI	GCNGC	7 cut(s)	103, 173, 277, 877, 983, 1176, 1348
PleI	GAGTC	7 cut(s)	232, 388, 877, 989, 1081, 1548, 1736
PpsI	GAGTC	7 cut(s)	232, 388, 877, 989, 1081, 1548, 1736
PpuMI	RGGWCCY	1 cut(s)	386
PscI	ACATGT	2 cut(s)	831, 1667
Psp124BI	GAGCTC	2 cut(s)	8, 113
Psp5II	RGGWCCY	1 cut(s)	386
Psp6I	CCWGG	7 cut(s)	160, 389, 475, 628, 1065, 1147, 1619
PspFI	CCCAGC	2 cut(s)	53, 175
PspGI	CCWGG	7 cut(s)	160, 389, 475, 628, 1065, 1147, 1619
PspN4I	GGNNCC	3 cut(s)	388, 736, 1002
PspPI	GGNCC	4 cut(s)	209, 386, 440, 1001
PspPPI	RGGWCCY	1 cut(s)	386
PstI	CTGCAG	1 cut(s)	931
PstNI	CAGNNNCTG	2 cut(s)	182, 935
PsuI	RGATCY	2 cut(s)	973, 1438
PvuII	CAGCTG	1 cut(s)	1657
RsaI	GTAC	2 cut(s)	1166, 1564
RsaNI	GTAC	2 cut(s)	1165, 1563
RseI	CAYNNNNRTG	1 cut(s)	918
SacI	GAGCTC	2 cut(s)	8, 113
SaqAI	TTAA	8 cut(s)	282, 366, 381, 1059, 1092, 1119, 1590, 1613
SatI	GCNGC	7 cut(s)	102, 172, 276, 876, 982, 1175, 1347
Sau3AI	GATC	5 cut(s)	326, 791, 859, 973, 1438
Sau96I	GGNCC	4 cut(s)	209, 386, 440, 1001
SchI	GAGTC	7 cut(s)	232, 388, 878, 989, 1082, 1549, 1736
ScrFI	CCNGG	7 cut(s)	162, 391, 477, 630, 1067, 1149, 1621
SduI	GDGCHC	3 cut(s)	8, 113, 1198
SfaNI	GCATC	8 cut(s)	113, 188, 355, 579, 1234, 1604, 1675, 1759
SfcI	CTRYAG	2 cut(s)	927, 1832
SinI	GGWCC	3 cut(s)	209, 386, 440
SmiMI	CAYNNNNRTG	1 cut(s)	918
SmlI	CTYRAG	4 cut(s)	80, 396, 686, 1518
SmoI	CTYRAG	4 cut(s)	80, 396, 686, 1518
SpeI	ACTAGT	1 cut(s)	203
SsiI	CCGC	6 cut(s)	21, 876, 1175, 1502, 1601, 1722
SspMI	CTAG	3 cut(s)	204, 842, 1251
SstI	GAGCTC	2 cut(s)	8, 113
StyD4I	CCNGG	7 cut(s)	160, 389, 475, 628, 1065, 1147, 1619
StyI	CCWWGG	2 cut(s)	124, 1701
TaaI	ACNGT	2 cut(s)	1499, 1807
TaiI	ACGT	2 cut(s)	554, 1796
TaqI	TCGA	4 cut(s)	14, 107, 349, 1203
TatI	WGTACW	2 cut(s)	1164, 1562
TauI	GCSGC	2 cut(s)	878, 1177
Tru1I	TTAA	8 cut(s)	282, 366, 381, 1059, 1092, 1119, 1590, 1613
Tru9I	TTAA	8 cut(s)	282, 366, 381, 1059, 1092, 1119, 1590, 1613
TscAI	CASTG	7 cut(s)	136, 142, 148, 760, 1309, 1504, 1810
TseFI	GTSAC	1 cut(s)	1670
TseI	GCWGC	5 cut(s)	101, 171, 275, 981, 1346
Tsp45I	GTSAC	1 cut(s)	1670
TspDTI	ATGAA	5 cut(s)	590, 861, 902, 936, 1521
TspGWI	ACGGA	2 cut(s)	214, 1633
TspRI	CASTG	7 cut(s)	136, 142, 148, 760, 1309, 1504, 1810
Van91I	CCANNNNNTGG	1 cut(s)	1154
VpaK11BI	GGWCC	3 cut(s)	209, 386, 440
XapI	RAATTY	4 cut(s)	311, 1015, 1048, 1258
XceI	RCATGY	3 cut(s)	835, 1225, 1671
XcmI	CCANNNNNNNNNTGG	1 cut(s)	590
XmiI	GTMKAC	1 cut(s)	1831
XmnI	GAANNNNTTC	1 cut(s)	315
XspI	CTAG	3 cut(s)	204, 842, 1251
Zsp2I	ATGCAT	3 cut(s)	594, 1227, 1597

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.