Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0007734

Physical Location & Seq

Genomic Coordinates Reverse (-)

12991292 .. 12996973

Gene Structure 5682 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ43261

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2013 bp

ATGAGCTTCAATTTGATTCCCTCTACTTCTTCGCAACCAGAGCAGAGGAGAAGTGAAGTTCCGATAGAGGAGTGCTGCCTTGTGAATAAGCAATCCACGGCTGCGTCGAGCTCGGATTCCGAAGGAAGTGAGAGTCCTGTTCTTAAGTCACCCGGGATTGGCAGCAGCCCGGCAGAGGCTTCTCCAGTTAACAAGAGGATTACTGGTCCTATTAGGCGAGCAAAGGGTGGTTGGACTCCACAGGAGGATGAGACATTGAGGAATGCAGTTGCAAAGTTTAAGGGGAAGAACTGGAAGAAAATAGCTCAATATTTTCCTGATAGATCAGAAGTGCAATGTCTGCATCGGTGGCAGAAGGTACTAAATCCAGAACTTGTTAAAGGACCATGGACTCAAGAGGAGGATGATAAAATCGTTGAACTGGTAGCAAAGTATGGACCTACAAAATGGTCGTTAATATCAAAGTCTTTGCCTGGTCGTATAGGAAAACAATGCCGAGAGAGGTGGCACAATCATTTAAATCCAGATATAAAGAGGGAGGCTTGGACGTTGGTGGAGGAATTAGCCCTTATGCATGCCCACCGAATGCATGGGAACAAGTGGGCCGAAATAGCTAAGGCTTTACCTGGAAGGACTGATAATGCAATAAAGAATCATTGGAATAGTTCCTTGAAGAAGAAATTAGATTTCTATTTAGCAACTGGGCAACTTCCCCCGCAACCAAAGAATAGTTACCCGAATGTTCCTAAAGAGACAAATAGATCCATTGCAACTAGAAGATTGCTTGTTGGCTCTGATAAAGGATCAGATTCAACTGCTCGGACATTGCCTGGAAATGCAGACACACGTAAAATAGATGAAGATGGCAAGGATCATCAATTGCAGTCCTCTGAACCTCTTGACATGGACATGTGTGCTTTCTATTTGGCGACTGGGCAACTTCCACCAGTACCAAAAAATAGTTTCCCAAATGATGCTAAAGAGACAAATAGATCCACTGCAACTACAAGATTGCTTGTTGATTCGGATAAAGGATCAGATTCAACCGCTCACACATTGTCTGTAAATGCGGACACATGTAAAATAGATGATAATGGCAAGGATCAGCTGCAGTCCTCCAGCTCTCAGGACATGTGCGGTTCATCAAGTATTCTTCCAGATGAACATGCTGATTCTGAAGTCATAGAGTGTAGGCTAAGATTATCTCTTACAGATCCTAGTTGCAGCAACTCAGAGTCGGTGCCAAAATTCACGAACTTTGCTGTAAACAGCAAGCTTCAGATTGAGAATTCAGGTATTAACAGTGAGCCGAAGTATGAGAATTCTGAATTCAACAGTCAAAAAGTTGAAGACAAAGTTGACAGTGCAACTGTGCCAGTTGAAACTCCTAGCTATGGTTCATTGTACTATGAACCACCACCATTGGACAGCTCTATTCCGTTAGATTCAGGGCTTCCAAACTTGCATTGCTTTCAGCATGACTACAAGTCTAGTCCGAACTGGTCACCTATTAGTTTCTTCACTCCTCCTACTGCAAAGAGCAGTGGTTTATATAATCGAAGCCCTGAATCAATTTTGAAAATAGCTGCTAAGACCTTCCCCAACACTCCTTCTATTTTGCGGAAAAGAAAGTCTGCCCAAGGACATTTACCTCCTAACAAACTTAGGATAGTTGATAGTGAATCAGTCAGGGAAACGCTCATTGTTCCCGAAGAACAGGAAAGAAATAAAAATAGTGTGGAACTGTCTGGGTCTCAAGATGTAAGTTTGTGTGACAGTCCAACCAGTCAAGGTATTAATACCACTGGTCCTAATGGTAAGGCTTTTAATGCATCTCCTCCATACCGTTTAAGATCCAGGAGGACTGCTGTTTTCAAGTCTGTGGAGAAACAACTTCAGTTTACATGTGAAGAAGAGTATGCTGGTAATTCCAAACCCGTGGGGTTATCTGCAAATGGGGGCACTGCTGTCACCAAAGATTGTTCCCATGCAACAAAGATGGGAGTTACCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001101 GO:0001134 GO:0001135 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0006950 GO:0008150 GO:0008285 GO:0009266 GO:0009409 GO:0009628 GO:0009719 GO:0009723 GO:0009725 GO:0009751 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010564 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0014070 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0032465 GO:0032502 GO:0042127 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0046677 GO:0047484 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0048585 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0051302 GO:0051726 GO:0060255 GO:0065007 GO:0080090 GO:0080134 GO:0097159 GO:0140110 GO:1901000 GO:1901002 GO:1901181 GO:1901363 GO:1901700 GO:1902584 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:2000070 GO:2000112 GO:2000113 GO:2001023 GO:2001024 GO:2001038 GO:2001039 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-binding

Protein Analysis

670

Amino Acids

73.83

Weight (kDa)

8.09

Isoelectric Point (pI)

64.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-binding	PF00249	75 - 121	4.3e-16	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	78 - 135	3.3e-16	Myb-like DNA-binding domain
Myb_DNA-binding	PF00249	127 - 173	6.3e-20	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	130 - 187	2.7e-18	Myb-like DNA-binding domain
Myb_DNA-binding	PF00249	179 - 222	3.5e-16	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	182 - 227	2.1e-07	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007734)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G02320 AT5G02320 AT5G02320
fragaria_vesca	FvH4_6g13670 FvH4_6g13670 FvH4_6g13670 FvH4_6g13670
malus_domestica	MD04G1129200.v1.1 MD12G1141900.v1.1
prunus_persica	Prupe.6G255400_v2.0.a1 Prupe.6G255400_v2.0.a1
pyrus_communis	pycom04g11740 pycom12g13660
rosa_chinensis	RchiOBHm_Chr3g0466541
rosa_laevigata	RLG00000024564
rosa_multiflora	Rmu_sc0003332.1_g000004
rosa_roxburghii	Rroxscaffold_6G00414390
rosa_rugosa	Rorug03G0082300 Rorug03G0082400
rosa_samantha	Rh3AG129400 Rh3BG150700 Rh3CG150500 Rh3DG151400
rosa_wichuraiana	Rw3G012230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1240
AccBSI	CCGCTC	1 cut(s)	1049
AciI	CCGC	5 cut(s)	716, 1047, 1070, 1137, 1621
AclWI	GGATC	8 cut(s)	756, 811, 879, 987, 1042, 1110, 1208, 1848
AcsI	RAATTY	4 cut(s)	1247, 1288, 1321, 1328
AcuI	CTGAAG	3 cut(s)	1197, 1262, 1880
AfaI	GTAC	3 cut(s)	360, 951, 1406
AfiI	CCNNNNNNNGG	3 cut(s)	158, 175, 1394
AflII	CTTAAG	1 cut(s)	143
AflIII	ACRYGT	5 cut(s)	845, 909, 1076, 1131, 1904
AhdI	GACNNNNNGTC	1 cut(s)	1486
AjnI	CCWGG	4 cut(s)	472, 625, 829, 1856
Alw21I	GWGCWC	1 cut(s)	113
Alw26I	GTCTC	4 cut(s)	245, 746, 977, 1758
AlwI	GGATC	8 cut(s)	756, 811, 879, 987, 1042, 1110, 1208, 1848
Ama87I	CYCGRG	1 cut(s)	152
AoxI	GGCC	1 cut(s)	603
ApeKI	GCWGC	7 cut(s)	75, 101, 162, 165, 1108, 1224, 1586
ApoI	RAATTY	4 cut(s)	1247, 1288, 1321, 1328
AseI	ATTAAT	1 cut(s)	1797
AspS9I	GGNCC	5 cut(s)	206, 383, 437, 603, 1808
AsuC2I	CCSGG	3 cut(s)	153, 154, 170
AsuHPI	GGTGA	3 cut(s)	141, 1497, 1963
AvaI	CYCGRG	1 cut(s)	152
AvaII	GGWCC	4 cut(s)	206, 383, 437, 1808
BaeGI	GKGCMC	1 cut(s)	1964
BanI	GGYRCC	1 cut(s)	1240
BanII	GRGCYC	1 cut(s)	113
BbsI	GAAGAC	1 cut(s)	1356
Bbv12I	GWGCWC	1 cut(s)	113
BbvI	GCAGC	7 cut(s)	62, 88, 174, 177, 1095, 1236, 1573
BccI	CCATC	2 cut(s)	857, 1993
BceAI	ACGGC	1 cut(s)	114
BciT130I	CCWGG	4 cut(s)	474, 627, 831, 1858
BcnI	CCSGG	3 cut(s)	153, 154, 170
BcoDI	GTCTC	4 cut(s)	245, 746, 977, 1758
BfaI	CTAG	5 cut(s)	774, 1218, 1389, 1491, 2011
BfmI	CTRYAG	1 cut(s)	1109
BfrI	CTTAAG	1 cut(s)	143
BisI	GCNGC	7 cut(s)	76, 102, 163, 166, 1109, 1225, 1587
BlsI	GCNGC	7 cut(s)	77, 103, 164, 167, 1110, 1226, 1588
Bme1390I	CCNGG	7 cut(s)	153, 154, 170, 474, 627, 831, 1858
Bme18I	GGWCC	4 cut(s)	206, 383, 437, 1808
BmeRI	GACNNNNNGTC	1 cut(s)	1486
BmeT110I	CYCGRG	1 cut(s)	152
BmgT120I	GGNCC	5 cut(s)	206, 383, 437, 603, 1808
BmiI	GGNNCC	1 cut(s)	1242
BmrFI	CCNGG	7 cut(s)	153, 154, 170, 474, 627, 831, 1858
BmrI	ACTGGG	2 cut(s)	711, 942
BmsI	GCATC	3 cut(s)	352, 964, 1841
BmuI	ACTGGG	2 cut(s)	711, 942
BpiI	GAAGAC	1 cut(s)	1356
BpmI	CTGGAG	2 cut(s)	168, 1102
Bpu10I	CCTNAGC	1 cut(s)	615
BpuEI	CTTGAG	2 cut(s)	378, 1740
BpuMI	CCSGG	3 cut(s)	153, 154, 170
BsaAI	YACGTR	1 cut(s)	848
BsaI	GGTCTC	1 cut(s)	1758
BsaJI	CCNNGG	5 cut(s)	96, 152, 386, 1639, 1938
Bsc4I	CCNNNNNNNGG	3 cut(s)	158, 175, 1394
Bse3DI	GCAATG	4 cut(s)	341, 765, 824, 1465
BseBI	CCWGG	4 cut(s)	474, 627, 831, 1858
BseDI	CCNNGG	5 cut(s)	96, 152, 386, 1639, 1938
BseGI	GGATG	2 cut(s)	253, 409
BseLI	CCNNNNNNNGG	3 cut(s)	158, 175, 1394
BseMI	GCAATG	4 cut(s)	341, 765, 824, 1465
BseMII	CTCAG	2 cut(s)	1139, 1245
BseRI	GAGGAG	5 cut(s)	61, 83, 413, 1515, 1827
BseSI	GKGCMC	1 cut(s)	1964
BseXI	GCAGC	7 cut(s)	62, 88, 174, 177, 1095, 1236, 1573
BshFI	GGCC	1 cut(s)	605
BshNI	GGYRCC	1 cut(s)	1240
BsiHKAI	GWGCWC	1 cut(s)	113
BsiHKCI	CYCGRG	1 cut(s)	152
BsiSI	CCGG	2 cut(s)	153, 170
BslI	CCNNNNNNNGG	3 cut(s)	158, 175, 1394
BsmAI	GTCTC	4 cut(s)	245, 746, 977, 1758
BsmI	GAATGC	2 cut(s)	268, 591
BsnI	GGCC	1 cut(s)	605
Bso31I	GGTCTC	1 cut(s)	1758
BsoBI	CYCGRG	1 cut(s)	152
Bsp1286I	GDGCHC	2 cut(s)	113, 1964
Bsp143I	GATC	9 cut(s)	323, 761, 803, 871, 992, 1034, 1102, 1213, 1853
Bsp19I	CCATGG	1 cut(s)	386
BspACI	CCGC	5 cut(s)	716, 1047, 1070, 1137, 1621
BspANI	GGCC	1 cut(s)	605
BspCNI	CTCAG	2 cut(s)	1138, 1244
BspLI	GGNNCC	1 cut(s)	1242
BspMAI	CTGCAG	1 cut(s)	1113
BspPI	GGATC	8 cut(s)	756, 811, 879, 987, 1042, 1110, 1208, 1848
BspT107I	GGYRCC	1 cut(s)	1240
BspTI	CTTAAG	1 cut(s)	143
BspTNI	GGTCTC	1 cut(s)	1758
BsrBI	CCGCTC	1 cut(s)	1049
BsrDI	GCAATG	4 cut(s)	341, 765, 824, 1465
BssECI	CCNNGG	5 cut(s)	96, 152, 386, 1639, 1938
BssMI	GATC	9 cut(s)	323, 761, 803, 871, 992, 1034, 1102, 1213, 1853
BssT1I	CCWWGG	2 cut(s)	386, 1639
Bst2UI	CCWGG	4 cut(s)	474, 627, 831, 1858
Bst4CI	ACNGT	7 cut(s)	1304, 1337, 1364, 1372, 1746, 1778, 1847
Bst6I	CTCTTC	1 cut(s)	1908
BstAFI	CTTAAG	1 cut(s)	143
BstAPI	GCANNNNNTGC	1 cut(s)	340
BstBAI	YACGTR	1 cut(s)	848
BstC8I	GCNNGC	3 cut(s)	219, 576, 1274
BstDEI	CTNAG	6 cut(s)	615, 1125, 1196, 1231, 1590, 1664
BstDSI	CCRYGG	3 cut(s)	96, 386, 1938
BstEII	GGTNACC	1 cut(s)	1503
BstF5I	GGATG	2 cut(s)	253, 409
BstKTI	GATC	9 cut(s)	326, 764, 806, 874, 995, 1037, 1105, 1216, 1856
BstMAI	GTCTC	4 cut(s)	245, 746, 977, 1758
BstMBI	GATC	9 cut(s)	323, 761, 803, 871, 992, 1034, 1102, 1213, 1853
BstMWI	GCNNNNNNNGC	5 cut(s)	40, 340, 349, 611, 1829
BstNI	CCWGG	4 cut(s)	474, 627, 831, 1858
BstNSI	RCATGY	6 cut(s)	578, 913, 1080, 1135, 1169, 1908
BstPI	GGTNACC	1 cut(s)	1503
BstSCI	CCNGG	7 cut(s)	151, 152, 168, 472, 625, 829, 1856
BstSFI	CTRYAG	1 cut(s)	1109
BstSLI	GKGCMC	1 cut(s)	1964
BstV1I	GCAGC	7 cut(s)	62, 88, 174, 177, 1095, 1236, 1573
BstV2I	GAAGAC	1 cut(s)	1356
BstX2I	RGATCY	4 cut(s)	761, 992, 1213, 1853
BstXI	CCANNNNNNTGG	1 cut(s)	1939
BstYI	RGATCY	4 cut(s)	761, 992, 1213, 1853
BsuRI	GGCC	1 cut(s)	605
BtgI	CCRYGG	3 cut(s)	96, 386, 1938
BtsCI	GGATG	2 cut(s)	253, 409
BtsI	GCAGTG	3 cut(s)	996, 1549, 1962
BtsIMutI	CAGTG	6 cut(s)	996, 1309, 1369, 1549, 1803, 1962
Cac8I	GCNNGC	3 cut(s)	219, 576, 1274
Cfr13I	GGNCC	5 cut(s)	206, 383, 437, 603, 1808
Cfr9I	CCCGGG	1 cut(s)	152
CseI	GACGC	1 cut(s)	93
Csp6I	GTAC	3 cut(s)	359, 950, 1405
CspCI	CAANNNNNGTGG	2 cut(s)	1404, 1439
CviQI	GTAC	3 cut(s)	359, 950, 1405
DdeI	CTNAG	6 cut(s)	615, 1125, 1196, 1231, 1590, 1664
DpnI	GATC	9 cut(s)	325, 763, 805, 873, 994, 1036, 1104, 1215, 1855
DpnII	GATC	9 cut(s)	323, 761, 803, 871, 992, 1034, 1102, 1213, 1853
DraI	TTTAAA	1 cut(s)	519
DriI	GACNNNNNGTC	1 cut(s)	1486
Eam1104I	CTCTTC	1 cut(s)	1908
Eam1105I	GACNNNNNGTC	1 cut(s)	1486
EarI	CTCTTC	1 cut(s)	1908
Ecl136II	GAGCTC	1 cut(s)	111
Eco130I	CCWWGG	2 cut(s)	386, 1639
Eco24I	GRGCYC	1 cut(s)	113
Eco31I	GGTCTC	1 cut(s)	1758
Eco47I	GGWCC	4 cut(s)	206, 383, 437, 1808
Eco53kI	GAGCTC	1 cut(s)	111
Eco57I	CTGAAG	3 cut(s)	1197, 1262, 1880
Eco88I	CYCGRG	1 cut(s)	152
Eco91I	GGTNACC	1 cut(s)	1503
EcoICRI	GAGCTC	1 cut(s)	111
EcoO65I	GGTNACC	1 cut(s)	1503
EcoRI	GAATTC	3 cut(s)	1288, 1321, 1328
EcoRII	CCWGG	4 cut(s)	472, 625, 829, 1856
EcoT14I	CCWWGG	2 cut(s)	386, 1639
EcoT22I	ATGCAT	3 cut(s)	576, 591, 1834
EcoT38I	GRGCYC	1 cut(s)	113
ErhI	CCWWGG	2 cut(s)	386, 1639
FauI	CCCGC	1 cut(s)	723
Fnu4HI	GCNGC	7 cut(s)	76, 102, 163, 166, 1109, 1225, 1587
FokI	GGATG	2 cut(s)	260, 416
FriOI	GRGCYC	1 cut(s)	113
Fsp4HI	GCNGC	7 cut(s)	76, 102, 163, 166, 1109, 1225, 1587
FspBI	CTAG	5 cut(s)	774, 1218, 1389, 1491, 2011
GluI	GCNGC	7 cut(s)	76, 102, 163, 166, 1109, 1225, 1587
GsuI	CTGGAG	2 cut(s)	168, 1102
HaeIII	GGCC	1 cut(s)	605
HapII	CCGG	2 cut(s)	153, 170
HgaI	GACGC	1 cut(s)	93
HincII	GTYRAC	2 cut(s)	190, 1360
HindII	GTYRAC	2 cut(s)	190, 1360
HindIII	AAGCTT	1 cut(s)	1274
HpaI	GTTAAC	1 cut(s)	190
HpaII	CCGG	2 cut(s)	153, 170
HphI	GGTGA	3 cut(s)	141, 1497, 1963
Hpy166II	GTNNAC	4 cut(s)	190, 1267, 1360, 1902
Hpy8I	GTNNAC	4 cut(s)	190, 1267, 1360, 1902
Hpy99I	CGWCG	1 cut(s)	109
HpyAV	CCTTC	5 cut(s)	116, 349, 624, 1606, 1620
HpyCH4III	ACNGT	7 cut(s)	1304, 1337, 1364, 1372, 1746, 1778, 1847
HpyCH4IV	ACGT	2 cut(s)	548, 847
HpyF10VI	GCNNNNNNNGC	5 cut(s)	40, 340, 349, 611, 1829
HpyF3I	CTNAG	6 cut(s)	615, 1125, 1196, 1231, 1590, 1664
HpySE526I	ACGT	2 cut(s)	548, 847
KspAI	GTTAAC	1 cut(s)	190
Kzo9I	GATC	9 cut(s)	323, 761, 803, 871, 992, 1034, 1102, 1213, 1853
Lsp1109I	GCAGC	7 cut(s)	62, 88, 174, 177, 1095, 1236, 1573
LweI	GCATC	3 cut(s)	352, 964, 1841
MaeI	CTAG	5 cut(s)	774, 1218, 1389, 1491, 2011
MaeII	ACGT	2 cut(s)	548, 847
MaeIII	GTNAC	6 cut(s)	147, 731, 1503, 1772, 1969, 2005
MalI	GATC	9 cut(s)	325, 763, 805, 873, 994, 1036, 1104, 1215, 1855
MbiI	CCGCTC	1 cut(s)	1049
MboI	GATC	9 cut(s)	323, 761, 803, 871, 992, 1034, 1102, 1213, 1853
MfeI	CAATTG	1 cut(s)	878
MflI	RGATCY	4 cut(s)	761, 992, 1213, 1853
MhlI	GDGCHC	2 cut(s)	113, 1964
MlyI	GAGTC	4 cut(s)	142, 229, 385, 1244
MmeI	TCCRAC	2 cut(s)	212, 1805
Mph1103I	ATGCAT	3 cut(s)	576, 591, 1834
MslI	CAYNNNNRTG	1 cut(s)	908
MspA1I	CMGCKG	1 cut(s)	1108
MspCI	CTTAAG	1 cut(s)	143
MspI	CCGG	2 cut(s)	153, 170
MspR9I	CCNGG	7 cut(s)	153, 154, 170, 474, 627, 831, 1858
MunI	CAATTG	1 cut(s)	878
Mva1269I	GAATGC	2 cut(s)	268, 591
MvaI	CCWGG	4 cut(s)	474, 627, 831, 1858
MwoI	GCNNNNNNNGC	5 cut(s)	40, 340, 349, 611, 1829
NciI	CCSGG	3 cut(s)	153, 154, 170
NcoI	CCATGG	1 cut(s)	386
NdeII	GATC	9 cut(s)	323, 761, 803, 871, 992, 1034, 1102, 1213, 1853
NlaIV	GGNNCC	1 cut(s)	1242
NmeAIII	GCCGAG	1 cut(s)	521
NmuCI	GTSAC	4 cut(s)	147, 1503, 1772, 1969
NsiI	ATGCAT	3 cut(s)	576, 591, 1834
NspI	RCATGY	6 cut(s)	578, 913, 1080, 1135, 1169, 1908
PaeI	GCATGC	1 cut(s)	578
PciI	ACATGT	4 cut(s)	909, 1076, 1131, 1904
PcsI	WCGNNNNNNNCGW	1 cut(s)	104
PctI	GAATGC	2 cut(s)	268, 591
PfoI	TCCNGGA	1 cut(s)	1856
PkrI	GCNGC	7 cut(s)	77, 103, 164, 167, 1110, 1226, 1588
PleI	GAGTC	4 cut(s)	141, 229, 385, 1243
PpsI	GAGTC	4 cut(s)	141, 229, 385, 1243
Ppu21I	YACGTR	1 cut(s)	848
PscI	ACATGT	4 cut(s)	909, 1076, 1131, 1904
PshBI	ATTAAT	1 cut(s)	1797
Psp124BI	GAGCTC	1 cut(s)	113
Psp6I	CCWGG	4 cut(s)	472, 625, 829, 1856
PspEI	GGTNACC	1 cut(s)	1503
PspGI	CCWGG	4 cut(s)	472, 625, 829, 1856
PspN4I	GGNNCC	1 cut(s)	1242
PspPI	GGNCC	5 cut(s)	206, 383, 437, 603, 1808
PstI	CTGCAG	1 cut(s)	1113
PsuI	RGATCY	4 cut(s)	761, 992, 1213, 1853
PvuII	CAGCTG	1 cut(s)	1108
RsaI	GTAC	3 cut(s)	360, 951, 1406
RsaNI	GTAC	3 cut(s)	359, 950, 1405
RseI	CAYNNNNRTG	1 cut(s)	908
SacI	GAGCTC	1 cut(s)	113
SatI	GCNGC	7 cut(s)	76, 102, 163, 166, 1109, 1225, 1587
Sau3AI	GATC	9 cut(s)	323, 761, 803, 871, 992, 1034, 1102, 1213, 1853
Sau96I	GGNCC	5 cut(s)	206, 383, 437, 603, 1808
SchI	GAGTC	4 cut(s)	142, 229, 385, 1244
ScrFI	CCNGG	7 cut(s)	153, 154, 170, 474, 627, 831, 1858
SduI	GDGCHC	2 cut(s)	113, 1964
SfaNI	GCATC	3 cut(s)	352, 964, 1841
SfcI	CTRYAG	1 cut(s)	1109
SinI	GGWCC	4 cut(s)	206, 383, 437, 1808
SmaI	CCCGGG	1 cut(s)	154
SmiI	ATTTAAAT	1 cut(s)	519
SmiMI	CAYNNNNRTG	1 cut(s)	908
SmlI	CTYRAG	3 cut(s)	143, 393, 1755
SmoI	CTYRAG	3 cut(s)	143, 393, 1755
SphI	GCATGC	1 cut(s)	578
SsiI	CCGC	5 cut(s)	716, 1047, 1070, 1137, 1621
SspI	AATATT	1 cut(s)	311
SspMI	CTAG	5 cut(s)	774, 1218, 1389, 1491, 2011
SstI	GAGCTC	1 cut(s)	113
StyD4I	CCNGG	7 cut(s)	151, 152, 168, 472, 625, 829, 1856
StyI	CCWWGG	2 cut(s)	386, 1639
SwaI	ATTTAAAT	1 cut(s)	519
TaaI	ACNGT	7 cut(s)	1304, 1337, 1364, 1372, 1746, 1778, 1847
TaiI	ACGT	2 cut(s)	551, 850
TaqI	TCGA	2 cut(s)	107, 1558
TatI	WGTACW	1 cut(s)	1404
TscAI	CASTG	6 cut(s)	1003, 1309, 1369, 1549, 1810, 1969
TseFI	GTSAC	4 cut(s)	147, 1503, 1772, 1969
TseI	GCWGC	7 cut(s)	75, 101, 162, 165, 1108, 1224, 1586
Tsp45I	GTSAC	4 cut(s)	147, 1503, 1772, 1969
TspDTI	ATGAA	5 cut(s)	873, 1131, 1176, 1389, 1425
TspGWI	ACGGA	1 cut(s)	1428
TspMI	CCCGGG	1 cut(s)	152
TspRI	CASTG	6 cut(s)	1003, 1309, 1369, 1549, 1810, 1969
Vha464I	CTTAAG	1 cut(s)	143
VpaK11BI	GGWCC	4 cut(s)	206, 383, 437, 1808
VspI	ATTAAT	1 cut(s)	1797
XapI	RAATTY	4 cut(s)	1247, 1288, 1321, 1328
XceI	RCATGY	6 cut(s)	578, 913, 1080, 1135, 1169, 1908
XcmI	CCANNNNNNNNNTGG	1 cut(s)	587
XmaI	CCCGGG	1 cut(s)	152
XspI	CTAG	5 cut(s)	774, 1218, 1389, 1491, 2011
Zsp2I	ATGCAT	3 cut(s)	576, 591, 1834

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.