pycom12g13660
MYB Family

Myb-related protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
Physical Location & Seq
Forward (+)
16145976 .. 16149859
3884 bp
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UTR
Exon/CDS
Intron
pycom12g13660.2

Sequence Viewer

Length: 1668 bp
ATGAGCTCGATTTCGATTCCCGCCACTTCTTCGCAAGCAGAGGAGGAGATGGCTGGGGCAAAATTAGAGGAGTGTTGCCTTGAGAATAAGCAATCCATGGCTACATCGAGCTCGTCTGTATCTGAAGGCAGTGGCAGTGCTATTATCAAGTCCACAGGGGCTTGCAGCCCAGCATCTGCTTCTCCAACTCAACGGAGAACTAGTGGTCCTATTAGGAGAGCCAAAGGCGGTTGGACTCCACAAGAGGACGAGACATTAAGGAATGCCGTTGCTGCTTTCAATGGGAAGAGTTGGAAGAAAATAGCTGAATTTTTTCCTGATAGATCCGAAGTGCAGTGTCTGCATAGATGGCAGAAGGAGGATGATAAAATAATTGAACTGGTAGCAAAGTATGGACCTACAAAATGGTCATTGATAGCAAAGTCTTTACCTGGTCGGATAGGGAAACAATGCCGAGAGAGGTGGCACAATCATTTGAATCCTGATATAAAGAAGGAGGCTTGGACGTTGGAAGAGGAATTAGCTCTTATGAAGGCCCACCAGATGCATGGGAACAAGTGGGCCGAAATAGCGAAGGTTTTACCTGGAAGGACTGATAATGCAATAAAGAATCATTGGAATAGTTCCTTGAAGAAAAAACTTGACTCATATTTGACTACTGGGACACTTCCACCACCTCCAAAGTGTGGTGCCAAAGAGCCAAGATCCAATGCAACTAAAAAAATACTTGTTTGTTCAACTAAAGGATCAGATTCAACTGCTCAGACATCATCTGGAAATGCAGACATGTCTAAGCTAGATGAAGATGGCAAGGATCAGTTCGAGTCCGCCGCCCCACCTCAGGATATGGGTGCTTCATTAAGTGTTCACCCAAATGAATTTGCAGATTCTGAAGGTGATAACCTGAGATTATCCTTTATGGATCTTAGTTGCTCTAACTCAGACTCAGGGCCAAAGTATGATAATTTTGGAGTAAAAAGAAAGCCTCAGATTGAGAGTTCTGTCAGTAATGGCCGGGCAGAGTCTGAGAATTGTGGATTTAACAACCAAATGGACGAAGACAAAGTTAAGACAACATCTTTTCCGTTTGAAACTCCAAGCTATGGTTCCTTATACTATGAGCCACCACCGCTGGAAAGCTCTGTCCAATTCAATTCAGGTTTTTCAAGCATGCATCGCTTGCAGAATGATTACACCTCTAGTCCAAATTTATCACCTATAAGTTTCTTCACTCCTCCTTGTGTGAAGGGCAGTGGTTTATGTAATCAAAGTCCTGAATCAATTTTGAAAATAGCTGCCAAGACCTTCCCCAATACTCCTTCCATTTTGCGAAAGAGAAAGACCATTGGCCAAGGACAATCGCCTCGTAATAAAGTTGCAATAGTGGATTGTGAATCAGTCAGGGAAATGCTTAATGTTTCTAGTGAACACAAAAACAGTGCGGAAGTTTCTGGATCTCAAGATGGAAGTTTATGTGAGAGTCCAACTAGTAATGGTATCAGTACCATTGGGCCTAATGGTAAGGCGTTTAATGCATCTCCACCATACCGGTTAAGAGCCAGGAGGACTGCCGTTTTCAAGTCTGTGGAGAAACAGCTTGAGTTTACATGTGATGAAGAGTATGATGCTAATTCTATGTCCGTGGAGTTATCTGCAAATGGCAGCTAA

Protein Analysis

556

Amino Acids

60.5

Weight (kDa)

7.48

Isoelectric Point (pI)

58.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 689
AccB7I CCANNNNNTGG 2 cut(s) 686, 1103
AciI CCGC 6 cut(s) 21, 228, 828, 831, 1130, 1442
AclWI GGATC 6 cut(s) 318, 699, 754, 822, 930, 1462
AcoI YGGCCR 2 cut(s) 1012, 1348
AcsI RAATTY 3 cut(s) 308, 878, 1207
AcuI CTGAAG 2 cut(s) 144, 912
AfaI GTAC 1 cut(s) 1504
AfiI CCNNNNNNNGG 3 cut(s) 686, 841, 1103
AflIII ACRYGT 2 cut(s) 786, 1607
AgeI ACCGGT 1 cut(s) 1548
AhlI ACTAGT 2 cut(s) 200, 1487
AjnI CCWGG 3 cut(s) 430, 583, 1559
AjuI GAANNNNNNNTTGG 2 cut(s) 1090, 1122
AloI GAACNNNNNNTCC 2 cut(s) 190, 222
Alw21I GWGCWC 2 cut(s) 8, 113
Alw26I GTCTC 1 cut(s) 245
AlwI GGATC 6 cut(s) 318, 699, 754, 822, 930, 1462
AlwNI CAGNNNCTG 4 cut(s) 176, 340, 890, 1025
AoxI GGCC 6 cut(s) 534, 561, 950, 1012, 1348, 1511
ApeKI GCWGC 4 cut(s) 165, 272, 1295, 1662
ApoI RAATTY 3 cut(s) 308, 878, 1207
AsiGI ACCGGT 1 cut(s) 1548
Asp700I GAANNNNTTC 1 cut(s) 312
AspS9I GGNCC 6 cut(s) 206, 395, 535, 561, 950, 1511
AsuC2I CCSGG 1 cut(s) 1016
AsuHPI GGTGA 3 cut(s) 860, 908, 1206
AvaII GGWCC 2 cut(s) 206, 395
AxyI CCTNAGG 1 cut(s) 840
BalI TGGCCA 1 cut(s) 1350
BanI GGYRCC 1 cut(s) 689
BanII GRGCYC 2 cut(s) 8, 113
BbsI GAAGAC 1 cut(s) 1065
Bbv12I GWGCWC 2 cut(s) 8, 113
BbvI GCAGC 3 cut(s) 177, 259, 1282
BccI CCATC 4 cut(s) 43, 342, 800, 1457
BceAI ACGGC 2 cut(s) 251, 1556
BciT130I CCWGG 3 cut(s) 432, 585, 1561
BcnI CCSGG 1 cut(s) 1016
BcoDI GTCTC 1 cut(s) 245
BcuI ACTAGT 2 cut(s) 200, 1487
BfaI CTAG 5 cut(s) 201, 797, 1200, 1422, 1488
BisI GCNGC 5 cut(s) 166, 273, 831, 1296, 1663
BlsI GCNGC 5 cut(s) 167, 274, 832, 1297, 1664
Bme1390I CCNGG 4 cut(s) 432, 585, 1016, 1561
Bme18I GGWCC 2 cut(s) 206, 395
BmgT120I GGNCC 6 cut(s) 206, 395, 535, 561, 950, 1511
BmiI GGNNCC 2 cut(s) 691, 1108
BmrFI CCNGG 4 cut(s) 432, 585, 1016, 1561
BmrI ACTGGG 1 cut(s) 669
BmsI GCATC 5 cut(s) 182, 534, 1183, 1544, 1615
BmuI ACTGGG 1 cut(s) 669
BpiI GAAGAC 1 cut(s) 1065
BpuEI CTTGAG 3 cut(s) 101, 1443, 1619
BpuMI CCSGG 1 cut(s) 1016
BsaJI CCNNGG 3 cut(s) 96, 1351, 1641
BsaWI WCCGGW 1 cut(s) 1548
BsaXI ACNNNNNCTCC 2 cut(s) 187, 217
Bsc4I CCNNNNNNNGG 3 cut(s) 686, 841, 1103
Bse118I RCCGGY 1 cut(s) 1548
Bse1I ACTGG 2 cut(s) 384, 664
Bse21I CCTNAGG 1 cut(s) 840
BseBI CCWGG 3 cut(s) 432, 585, 1561
BseDI CCNNGG 3 cut(s) 96, 1351, 1641
BseGI GGATG 1 cut(s) 367
BseLI CCNNNNNNNGG 3 cut(s) 686, 841, 1103
BseMII CTCAG 7 cut(s) 776, 854, 896, 954, 960, 1001, 1017
BseNI ACTGG 2 cut(s) 384, 664
BseRI GAGGAG 4 cut(s) 56, 59, 83, 1224
BseXI GCAGC 3 cut(s) 177, 259, 1282
BseYI CCCAGC 2 cut(s) 53, 169
BsgI GTGCAG 1 cut(s) 353
BshFI GGCC 6 cut(s) 536, 563, 952, 1014, 1350, 1513
BshNI GGYRCC 1 cut(s) 689
BshTI ACCGGT 1 cut(s) 1548
BsiHKAI GWGCWC 2 cut(s) 8, 113
BsiSI CCGG 2 cut(s) 1015, 1549
BslFI GGGAC 1 cut(s) 676
BslI CCNNNNNNNGG 3 cut(s) 686, 841, 1103
BsmAI GTCTC 1 cut(s) 245
BsmFI GGGAC 1 cut(s) 676
BsmI GAATGC 1 cut(s) 268
BsnI GGCC 6 cut(s) 536, 563, 952, 1014, 1350, 1513
Bsp1286I GDGCHC 2 cut(s) 8, 113
Bsp143I GATC 6 cut(s) 323, 704, 746, 814, 922, 1454
Bsp19I CCATGG 1 cut(s) 96
BspACI CCGC 6 cut(s) 21, 228, 828, 831, 1130, 1442
BspANI GGCC 6 cut(s) 536, 563, 952, 1014, 1350, 1513
BspCNI CTCAG 7 cut(s) 775, 853, 897, 953, 959, 1000, 1018
BspLI GGNNCC 2 cut(s) 691, 1108
BspPI GGATC 6 cut(s) 318, 699, 754, 822, 930, 1462
BspT107I GGYRCC 1 cut(s) 689
BsrFI RCCGGY 1 cut(s) 1548
BsrI ACTGG 2 cut(s) 384, 664
BssAI RCCGGY 1 cut(s) 1548
BssECI CCNNGG 3 cut(s) 96, 1351, 1641
BssMI GATC 6 cut(s) 323, 704, 746, 814, 922, 1454
BssT1I CCWWGG 2 cut(s) 96, 1351
Bst2UI CCWGG 3 cut(s) 432, 585, 1561
Bst4CI ACNGT 1 cut(s) 1439
Bst6I CTCTTC 3 cut(s) 281, 507, 1611
BstAPI GCANNNNNTGC 2 cut(s) 340, 1180
BstC8I GCNNGC 4 cut(s) 36, 163, 1172, 1181
BstDEI CTNAG 9 cut(s) 762, 792, 840, 905, 926, 940, 946, 987, 1026
BstDSI CCRYGG 2 cut(s) 96, 1641
BstF5I GGATG 1 cut(s) 367
BstKTI GATC 6 cut(s) 326, 707, 749, 817, 925, 1457
BstMAI GTCTC 1 cut(s) 245
BstMBI GATC 6 cut(s) 323, 704, 746, 814, 922, 1454
BstMWI GCNNNNNNNGC 8 cut(s) 272, 340, 349, 569, 1129, 1176, 1180, 1532
BstNI CCWGG 3 cut(s) 432, 585, 1561
BstNSI RCATGY 3 cut(s) 790, 1174, 1611
BstSCI CCNGG 4 cut(s) 430, 583, 1014, 1559
BstV1I GCAGC 3 cut(s) 177, 259, 1282
BstV2I GAAGAC 1 cut(s) 1065
BstX2I RGATCY 4 cut(s) 323, 704, 922, 1454
BstXI CCANNNNNNTGG 1 cut(s) 548
BstYI RGATCY 4 cut(s) 323, 704, 922, 1454
Bsu36I CCTNAGG 1 cut(s) 840
BsuRI GGCC 6 cut(s) 536, 563, 952, 1014, 1350, 1513
BtgI CCRYGG 2 cut(s) 96, 1641
BtgZI GCGATG 1 cut(s) 1160
BtsCI GGATG 1 cut(s) 367
BtsI GCAGTG 4 cut(s) 136, 142, 341, 1258
BtsIMutI CAGTG 5 cut(s) 136, 142, 341, 1258, 1444
Cac8I GCNNGC 4 cut(s) 36, 163, 1172, 1181
CaiI CAGNNNCTG 4 cut(s) 176, 340, 890, 1025
Cfr10I RCCGGY 1 cut(s) 1548
Cfr13I GGNCC 6 cut(s) 206, 395, 535, 561, 950, 1511
CsiI ACCWGGT 1 cut(s) 430
Csp6I GTAC 1 cut(s) 1503
CspAI ACCGGT 1 cut(s) 1548
CviAII CATG 5 cut(s) 97, 548, 787, 1171, 1608
CviQI GTAC 1 cut(s) 1503
DdeI CTNAG 9 cut(s) 762, 792, 840, 905, 926, 940, 946, 987, 1026
DpnI GATC 6 cut(s) 325, 706, 748, 816, 924, 1456
DpnII GATC 6 cut(s) 323, 704, 746, 814, 922, 1454
EaeI YGGCCR 2 cut(s) 1012, 1348
Eam1104I CTCTTC 3 cut(s) 281, 507, 1611
EarI CTCTTC 3 cut(s) 281, 507, 1611
EciI GGCGGA 1 cut(s) 817
Ecl136II GAGCTC 2 cut(s) 6, 111
Eco130I CCWWGG 2 cut(s) 96, 1351
Eco24I GRGCYC 2 cut(s) 8, 113
Eco47I GGWCC 2 cut(s) 206, 395
Eco53kI GAGCTC 2 cut(s) 6, 111
Eco57I CTGAAG 2 cut(s) 144, 912
Eco81I CCTNAGG 1 cut(s) 840
EcoICRI GAGCTC 2 cut(s) 6, 111
EcoRII CCWGG 3 cut(s) 430, 583, 1559
EcoT14I CCWWGG 2 cut(s) 96, 1351
EcoT22I ATGCAT 3 cut(s) 549, 1176, 1537
EcoT38I GRGCYC 2 cut(s) 8, 113
ErhI CCWWGG 2 cut(s) 96, 1351
FaeI CATG 5 cut(s) 100, 551, 790, 1174, 1611
FaqI GGGAC 1 cut(s) 676
FatI CATG 5 cut(s) 96, 547, 786, 1170, 1607
FauI CCCGC 1 cut(s) 28
Fnu4HI GCNGC 5 cut(s) 166, 273, 831, 1296, 1663
FokI GGATG 1 cut(s) 374
FriOI GRGCYC 2 cut(s) 8, 113
Fsp4HI GCNGC 5 cut(s) 166, 273, 831, 1296, 1663
FspBI CTAG 5 cut(s) 201, 797, 1200, 1422, 1488
GluI GCNGC 5 cut(s) 166, 273, 831, 1296, 1663
GsaI CCCAGC 2 cut(s) 57, 173
HaeIII GGCC 6 cut(s) 536, 563, 952, 1014, 1350, 1513
HapII CCGG 2 cut(s) 1015, 1549
Hin1II CATG 5 cut(s) 100, 551, 790, 1174, 1611
HpaII CCGG 2 cut(s) 1015, 1549
HphI GGTGA 3 cut(s) 860, 908, 1206
Hpy166II GTNNAC 4 cut(s) 153, 868, 1427, 1605
Hpy188I TCNGA 9 cut(s) 124, 328, 438, 751, 765, 892, 943, 990, 1027
Hpy188III TCNNGA 7 cut(s) 317, 482, 774, 842, 1274, 1452, 1460
Hpy8I GTNNAC 4 cut(s) 153, 868, 1427, 1605
HpyCH4III ACNGT 1 cut(s) 1439
HpyCH4IV ACGT 1 cut(s) 506
HpyF10VI GCNNNNNNNGC 8 cut(s) 272, 340, 349, 569, 1129, 1176, 1180, 1532
HpyF3I CTNAG 9 cut(s) 762, 792, 840, 905, 926, 940, 946, 987, 1026
HpySE526I ACGT 1 cut(s) 506
Hsp92II CATG 5 cut(s) 100, 551, 790, 1174, 1611
Kzo9I GATC 6 cut(s) 323, 704, 746, 814, 922, 1454
Lsp1109I GCAGC 3 cut(s) 177, 259, 1282
LweI GCATC 5 cut(s) 182, 534, 1183, 1544, 1615
MabI ACCWGGT 1 cut(s) 430
MaeI CTAG 5 cut(s) 201, 797, 1200, 1422, 1488
MaeII ACGT 1 cut(s) 506
MalI GATC 6 cut(s) 325, 706, 748, 816, 924, 1456
MboI GATC 6 cut(s) 323, 704, 746, 814, 922, 1454
MboII GAAGA 9 cut(s) 21, 298, 307, 524, 643, 815, 1070, 1219, 1628
MflI RGATCY 4 cut(s) 323, 704, 922, 1454
MhlI GDGCHC 2 cut(s) 8, 113
MlsI TGGCCA 1 cut(s) 1350
MluNI TGGCCA 1 cut(s) 1350
MlyI GAGTC 6 cut(s) 229, 638, 833, 938, 1031, 1489
MmeI TCCRAC 6 cut(s) 209, 212, 272, 416, 489, 1508
Mox20I TGGCCA 1 cut(s) 1350
Mph1103I ATGCAT 3 cut(s) 549, 1176, 1537
MroXI GAANNNNTTC 1 cut(s) 312
MscI TGGCCA 1 cut(s) 1350
MseI TTAA 7 cut(s) 257, 860, 1041, 1068, 1413, 1530, 1553
MslI CAYNNNNRTG 1 cut(s) 873
Msp20I TGGCCA 1 cut(s) 1350
MspA1I CMGCKG 1 cut(s) 1132
MspI CCGG 2 cut(s) 1015, 1549
MspR9I CCNGG 4 cut(s) 432, 585, 1016, 1561
Mva1269I GAATGC 1 cut(s) 268
MvaI CCWGG 3 cut(s) 432, 585, 1561
MwoI GCNNNNNNNGC 8 cut(s) 272, 340, 349, 569, 1129, 1176, 1180, 1532
NciI CCSGG 1 cut(s) 1016
NcoI CCATGG 1 cut(s) 96
NdeII GATC 6 cut(s) 323, 704, 746, 814, 922, 1454
NlaIII CATG 5 cut(s) 100, 551, 790, 1174, 1611
NlaIV GGNNCC 2 cut(s) 691, 1108
NmeAIII GCCGAG 1 cut(s) 479
NsiI ATGCAT 3 cut(s) 549, 1176, 1537
NspI RCATGY 3 cut(s) 790, 1174, 1611
PaeI GCATGC 1 cut(s) 1174
PciI ACATGT 2 cut(s) 786, 1607
PctI GAATGC 1 cut(s) 268
PdmI GAANNNNTTC 1 cut(s) 312
PfeI GAWTC 7 cut(s) 16, 478, 610, 752, 887, 1277, 1394
PflMI CCANNNNNTGG 2 cut(s) 686, 1103
PinAI ACCGGT 1 cut(s) 1548
PkrI GCNGC 5 cut(s) 167, 274, 832, 1297, 1664
PleI GAGTC 6 cut(s) 229, 638, 832, 938, 1030, 1488
PpsI GAGTC 6 cut(s) 229, 638, 832, 938, 1030, 1488
PscI ACATGT 2 cut(s) 786, 1607
Psp124BI GAGCTC 2 cut(s) 8, 113
Psp6I CCWGG 3 cut(s) 430, 583, 1559
PspFI CCCAGC 2 cut(s) 53, 169
PspGI CCWGG 3 cut(s) 430, 583, 1559
PspN4I GGNNCC 2 cut(s) 691, 1108
PspPI GGNCC 6 cut(s) 206, 395, 535, 561, 950, 1511
PstNI CAGNNNCTG 4 cut(s) 176, 340, 890, 1025
PsuI RGATCY 4 cut(s) 323, 704, 922, 1454
RsaI GTAC 1 cut(s) 1504
RsaNI GTAC 1 cut(s) 1503
RseI CAYNNNNRTG 1 cut(s) 873
SacI GAGCTC 2 cut(s) 8, 113
SaqAI TTAA 7 cut(s) 257, 860, 1041, 1068, 1413, 1530, 1553
SatI GCNGC 5 cut(s) 166, 273, 831, 1296, 1663
Sau3AI GATC 6 cut(s) 323, 704, 746, 814, 922, 1454
Sau96I GGNCC 6 cut(s) 206, 395, 535, 561, 950, 1511
SchI GAGTC 6 cut(s) 229, 638, 833, 938, 1031, 1489
ScrFI CCNGG 4 cut(s) 432, 585, 1016, 1561
SduI GDGCHC 2 cut(s) 8, 113
SexAI ACCWGGT 1 cut(s) 430
SfaNI GCATC 5 cut(s) 182, 534, 1183, 1544, 1615
SinI GGWCC 2 cut(s) 206, 395
SmiMI CAYNNNNRTG 1 cut(s) 873
SmlI CTYRAG 3 cut(s) 80, 1458, 1598
SmoI CTYRAG 3 cut(s) 80, 1458, 1598
SpeI ACTAGT 2 cut(s) 200, 1487
SphI GCATGC 1 cut(s) 1174
SsiI CCGC 6 cut(s) 21, 228, 828, 831, 1130, 1442
SspMI CTAG 5 cut(s) 201, 797, 1200, 1422, 1488
SstI GAGCTC 2 cut(s) 8, 113
StyD4I CCNGG 4 cut(s) 430, 583, 1014, 1559
StyI CCWWGG 2 cut(s) 96, 1351
TaaI ACNGT 1 cut(s) 1439
TaiI ACGT 1 cut(s) 509
TaqI TCGA 4 cut(s) 8, 14, 107, 822
TauI GCSGC 1 cut(s) 833
TfiI GAWTC 7 cut(s) 16, 478, 610, 752, 887, 1277, 1394
Tru1I TTAA 7 cut(s) 257, 860, 1041, 1068, 1413, 1530, 1553
Tru9I TTAA 7 cut(s) 257, 860, 1041, 1068, 1413, 1530, 1553
TscAI CASTG 5 cut(s) 136, 142, 341, 1258, 1444
TseI GCWGC 4 cut(s) 165, 272, 1295, 1662
TspDTI ATGAA 5 cut(s) 545, 816, 846, 891, 1629
TspGWI ACGGA 3 cut(s) 208, 1074, 1630
TspRI CASTG 5 cut(s) 136, 142, 341, 1258, 1444
Van91I CCANNNNNTGG 2 cut(s) 686, 1103
VpaK11BI GGWCC 2 cut(s) 206, 395
XapI RAATTY 3 cut(s) 308, 878, 1207
XceI RCATGY 3 cut(s) 790, 1174, 1611
XcmI CCANNNNNNNNNTGG 1 cut(s) 545
XmnI GAANNNNTTC 1 cut(s) 312
XspI CTAG 5 cut(s) 201, 797, 1200, 1422, 1488
Zsp2I ATGCAT 3 cut(s) 549, 1176, 1537
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.