Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3B

Orthogroup ID

OG0007734

Physical Location & Seq

Genomic Coordinates Reverse (-)

12799949 .. 12805818

Gene Structure 5870 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3BG150700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2010 bp

ATGAGCTTCAATTTGATTCCCTCTACTTCTTCGCAACCAGAGAGGAGAAGTGAAGTTCCGATAGAGGAGTGCTGCCTTGTGAATAAGCAATCCACGGCTGCGTCGAGCTCGGATTCCGAAGGAAGTGAGAGTCCTGTTCTTAAGTCACCCGGGATTGGCAGCAGCCCGGCAGAGGCTTCTCCAGTTAACAAGAGGATTACTGGTCCTATTAGGCGAGCAAAGGGTGGTTGGACTCCACAGGAGGATGAGACATTGAGGAATGCAGTTGCAAAGTTTAAGGGGAAGAACTGGAAGAAAATAGCTCAATATTTTCCTGATAGATCAGAAGTGCAATGTCTGCATCGGTGGCAGAAGGTACTAAATCCAGAACTTGTTAAAGGACCATGGACTCAAGAGGAGGATGATAAAATCGTTGAACTGGTAGCAAAGTATGGACCTACAAAATGGTCGTTAATATCAAAGTCTTTGCCTGGTCGTATAGGAAAACAATGCCGAGAGAGGTGGCACAATCATTTAAATCCAGATATAAAGAGGGAGGCTTGGACGTTGGTGGAGGAATTAGCCCTTATGCATGCCCACCGAATGCATGGGAACAAGTGGGCCGAAATAGCTAAGGCTTTACCTGGAAGGACTGATAATGCAATAAAGAATCATTGGAATAGTTCCTTGAAGAAGAAATTAGATTTCTATTTAGCAACTGGGCAACTTCCCCCGCAACCAAAGAATAGTTACCCGAATGTTCCTAAAGAGACAAATAGATCCATTGCAACTAGAAGATTGCTTGTTGGCTCTGATAAAGGATCAGATTCAACTGCTCGGACATTGCCTGGAAATGCAGACACACGTAAAATAGATGAAGATGGCAAGGATCATCAATTGCAGTCCTCTGAACCTCTTGACATGGACATGTGTGCTTTCTATTTGGCGACTGGGCAACTTCCACCAGTACCAAAAAATAGTTTCCCAAATGATGCTAAAGAGACAAATAGATCCACTGCAACTACAAGATTGCTTGTTGATTCGGATAAAGGATCAGATTCAACCGCTCACACATTGTCTGTAAATGCGGACACATGTAAAATAGATGATAATGGCAAGGATCAGCTGCAGTCCTCCAGCTCTCAGGACATGTGCGGTTCATCAAGTATTCTTCCAGATGAACATGCTGATTCTGAAGTCATAGAGTGTAGGCTAAGATTATCTCTTACAGATCCTAGTTGCAGCAACTCAGAGTCGGTGCCAAAATTCACGAACTTTGCTGTAAACAGCAAGCTTCAGATTGAGAATTCAGGTATTAACAGTGAGCCGAAGTATGAGAATTCTGAATTCAACAGTCAAAAAGTTGAAGACAAAGTTGACAGTGCAACTGTGCCAGTTGAAACTCCTAGCTATGGTTCATTGTACTATGAACCACCACCATTGGACAGCTCTATTCCGTTAGATTCAGGGCTTCCAAACTTGCATTGCTTTCAGCATGACTACAAGTCTAGTCCGAACTGGTCACCTATTAGTTTCTTCACTCCTCCTACTGCAAAGAGCAGTGGTTTATATAATCGAAGCCCTGAATCAATTTTGAAAATAGCTGCTAAGACCTTCCCCAACACTCCTTCTATTTTGCGGAAAAGAAAGTCTGCCCAAGGACATTTACCTCCTAACAAACTTAGGATAGTTGATAGTGAATCAGTCAGGGAAACGCTCATTGTTCCCGAAGAACAGGAAAGAAATAAAAATAGTGTGGAACTGTCTGGGTCTCAAGATGTAAGTTTGTGTGACAGTCCAACCAGTCAAGGTATTAATACCACTGGTCCTAATGGTAAGGCTTTTAATGCATCTCCTCCATACCGTTTAAGATCCAGGAGGACTGCTGTTTTCAAGTCTGTGGAGAAACAACTTCAGTTTACATGTGAAGAAGAGTATGCTGGTAATTCCAAACCCGTGGGGTTATCTGCAAATGGGGGCACTGCTGTCACCAAAGATTGTTCCCATGCAACAAAGATGGGAGTTACCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001101 GO:0001134 GO:0001135 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0006950 GO:0008150 GO:0008285 GO:0009266 GO:0009409 GO:0009628 GO:0009719 GO:0009723 GO:0009725 GO:0009751 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010564 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0014070 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0032465 GO:0032502 GO:0042127 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0046677 GO:0047484 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0048585 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0051302 GO:0051726 GO:0060255 GO:0065007 GO:0080090 GO:0080134 GO:0097159 GO:0140110 GO:1901000 GO:1901002 GO:1901181 GO:1901363 GO:1901700 GO:1902584 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:2000070 GO:2000112 GO:2000113 GO:2001023 GO:2001024 GO:2001038 GO:2001039 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-binding

Protein Analysis

669

Amino Acids

73.7

Weight (kDa)

8.09

Isoelectric Point (pI)

64.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-binding	PF00249	74 - 120	4.3e-16	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	77 - 134	3.3e-16	Myb-like DNA-binding domain
Myb_DNA-binding	PF00249	126 - 172	6.2e-20	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	129 - 186	2.7e-18	Myb-like DNA-binding domain
Myb_DNA-binding	PF00249	178 - 221	3.5e-16	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	181 - 226	2.1e-07	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007734)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G02320 AT5G02320 AT5G02320
fragaria_vesca	FvH4_6g13670 FvH4_6g13670 FvH4_6g13670 FvH4_6g13670
malus_domestica	MD04G1129200.v1.1 MD12G1141900.v1.1
prunus_persica	Prupe.6G255400_v2.0.a1 Prupe.6G255400_v2.0.a1
pyrus_communis	pycom04g11740 pycom12g13660
rosa_chinensis	RchiOBHm_Chr3g0466541
rosa_laevigata	RLG00000024564
rosa_multiflora	Rmu_sc0003332.1_g000004
rosa_roxburghii	Rroxscaffold_6G00414390
rosa_rugosa	Rorug03G0082300 Rorug03G0082400
rosa_samantha	Rh3AG129400 Rh3BG150700 Rh3CG150500 Rh3DG151400
rosa_wichuraiana	Rw3G012230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1237
AccBSI	CCGCTC	1 cut(s)	1046
AciI	CCGC	5 cut(s)	713, 1044, 1067, 1134, 1618
AclWI	GGATC	8 cut(s)	753, 808, 876, 984, 1039, 1107, 1205, 1845
AcsI	RAATTY	4 cut(s)	1244, 1285, 1318, 1325
AcuI	CTGAAG	3 cut(s)	1194, 1259, 1877
AfaI	GTAC	3 cut(s)	357, 948, 1403
AfiI	CCNNNNNNNGG	3 cut(s)	155, 172, 1391
AflII	CTTAAG	1 cut(s)	140
AflIII	ACRYGT	5 cut(s)	842, 906, 1073, 1128, 1901
AhdI	GACNNNNNGTC	1 cut(s)	1483
AjnI	CCWGG	4 cut(s)	469, 622, 826, 1853
Alw21I	GWGCWC	1 cut(s)	110
Alw26I	GTCTC	4 cut(s)	242, 743, 974, 1755
AlwI	GGATC	8 cut(s)	753, 808, 876, 984, 1039, 1107, 1205, 1845
Ama87I	CYCGRG	1 cut(s)	149
AoxI	GGCC	1 cut(s)	600
ApeKI	GCWGC	7 cut(s)	72, 98, 159, 162, 1105, 1221, 1583
ApoI	RAATTY	4 cut(s)	1244, 1285, 1318, 1325
AseI	ATTAAT	1 cut(s)	1794
AspS9I	GGNCC	5 cut(s)	203, 380, 434, 600, 1805
AsuC2I	CCSGG	3 cut(s)	150, 151, 167
AsuHPI	GGTGA	3 cut(s)	138, 1494, 1960
AvaI	CYCGRG	1 cut(s)	149
AvaII	GGWCC	4 cut(s)	203, 380, 434, 1805
BaeGI	GKGCMC	1 cut(s)	1961
BanI	GGYRCC	1 cut(s)	1237
BanII	GRGCYC	1 cut(s)	110
BbsI	GAAGAC	1 cut(s)	1353
Bbv12I	GWGCWC	1 cut(s)	110
BbvI	GCAGC	7 cut(s)	59, 85, 171, 174, 1092, 1233, 1570
BccI	CCATC	2 cut(s)	854, 1990
BceAI	ACGGC	1 cut(s)	111
BciT130I	CCWGG	4 cut(s)	471, 624, 828, 1855
BcnI	CCSGG	3 cut(s)	150, 151, 167
BcoDI	GTCTC	4 cut(s)	242, 743, 974, 1755
BfaI	CTAG	5 cut(s)	771, 1215, 1386, 1488, 2008
BfmI	CTRYAG	1 cut(s)	1106
BfrI	CTTAAG	1 cut(s)	140
BisI	GCNGC	7 cut(s)	73, 99, 160, 163, 1106, 1222, 1584
BlsI	GCNGC	7 cut(s)	74, 100, 161, 164, 1107, 1223, 1585
Bme1390I	CCNGG	7 cut(s)	150, 151, 167, 471, 624, 828, 1855
Bme18I	GGWCC	4 cut(s)	203, 380, 434, 1805
BmeRI	GACNNNNNGTC	1 cut(s)	1483
BmeT110I	CYCGRG	1 cut(s)	149
BmgT120I	GGNCC	5 cut(s)	203, 380, 434, 600, 1805
BmiI	GGNNCC	1 cut(s)	1239
BmrFI	CCNGG	7 cut(s)	150, 151, 167, 471, 624, 828, 1855
BmrI	ACTGGG	2 cut(s)	708, 939
BmsI	GCATC	3 cut(s)	349, 961, 1838
BmuI	ACTGGG	2 cut(s)	708, 939
BpiI	GAAGAC	1 cut(s)	1353
BpmI	CTGGAG	2 cut(s)	165, 1099
Bpu10I	CCTNAGC	1 cut(s)	612
BpuEI	CTTGAG	2 cut(s)	375, 1737
BpuMI	CCSGG	3 cut(s)	150, 151, 167
BsaAI	YACGTR	1 cut(s)	845
BsaI	GGTCTC	1 cut(s)	1755
BsaJI	CCNNGG	5 cut(s)	93, 149, 383, 1636, 1935
Bsc4I	CCNNNNNNNGG	3 cut(s)	155, 172, 1391
Bse3DI	GCAATG	4 cut(s)	338, 762, 821, 1462
BseBI	CCWGG	4 cut(s)	471, 624, 828, 1855
BseDI	CCNNGG	5 cut(s)	93, 149, 383, 1636, 1935
BseGI	GGATG	2 cut(s)	250, 406
BseLI	CCNNNNNNNGG	3 cut(s)	155, 172, 1391
BseMI	GCAATG	4 cut(s)	338, 762, 821, 1462
BseMII	CTCAG	2 cut(s)	1136, 1242
BseRI	GAGGAG	5 cut(s)	58, 80, 410, 1512, 1824
BseSI	GKGCMC	1 cut(s)	1961
BseXI	GCAGC	7 cut(s)	59, 85, 171, 174, 1092, 1233, 1570
BshFI	GGCC	1 cut(s)	602
BshNI	GGYRCC	1 cut(s)	1237
BsiHKAI	GWGCWC	1 cut(s)	110
BsiHKCI	CYCGRG	1 cut(s)	149
BsiSI	CCGG	2 cut(s)	150, 167
BslI	CCNNNNNNNGG	3 cut(s)	155, 172, 1391
BsmAI	GTCTC	4 cut(s)	242, 743, 974, 1755
BsmI	GAATGC	2 cut(s)	265, 588
BsnI	GGCC	1 cut(s)	602
Bso31I	GGTCTC	1 cut(s)	1755
BsoBI	CYCGRG	1 cut(s)	149
Bsp1286I	GDGCHC	2 cut(s)	110, 1961
Bsp143I	GATC	9 cut(s)	320, 758, 800, 868, 989, 1031, 1099, 1210, 1850
Bsp19I	CCATGG	1 cut(s)	383
BspACI	CCGC	5 cut(s)	713, 1044, 1067, 1134, 1618
BspANI	GGCC	1 cut(s)	602
BspCNI	CTCAG	2 cut(s)	1135, 1241
BspLI	GGNNCC	1 cut(s)	1239
BspMAI	CTGCAG	1 cut(s)	1110
BspPI	GGATC	8 cut(s)	753, 808, 876, 984, 1039, 1107, 1205, 1845
BspT107I	GGYRCC	1 cut(s)	1237
BspTI	CTTAAG	1 cut(s)	140
BspTNI	GGTCTC	1 cut(s)	1755
BsrBI	CCGCTC	1 cut(s)	1046
BsrDI	GCAATG	4 cut(s)	338, 762, 821, 1462
BssECI	CCNNGG	5 cut(s)	93, 149, 383, 1636, 1935
BssMI	GATC	9 cut(s)	320, 758, 800, 868, 989, 1031, 1099, 1210, 1850
BssT1I	CCWWGG	2 cut(s)	383, 1636
Bst2UI	CCWGG	4 cut(s)	471, 624, 828, 1855
Bst4CI	ACNGT	7 cut(s)	1301, 1334, 1361, 1369, 1743, 1775, 1844
Bst6I	CTCTTC	1 cut(s)	1905
BstAFI	CTTAAG	1 cut(s)	140
BstAPI	GCANNNNNTGC	1 cut(s)	337
BstBAI	YACGTR	1 cut(s)	845
BstC8I	GCNNGC	3 cut(s)	216, 573, 1271
BstDEI	CTNAG	6 cut(s)	612, 1122, 1193, 1228, 1587, 1661
BstDSI	CCRYGG	3 cut(s)	93, 383, 1935
BstEII	GGTNACC	1 cut(s)	1500
BstF5I	GGATG	2 cut(s)	250, 406
BstKTI	GATC	9 cut(s)	323, 761, 803, 871, 992, 1034, 1102, 1213, 1853
BstMAI	GTCTC	4 cut(s)	242, 743, 974, 1755
BstMBI	GATC	9 cut(s)	320, 758, 800, 868, 989, 1031, 1099, 1210, 1850
BstMWI	GCNNNNNNNGC	4 cut(s)	337, 346, 608, 1826
BstNI	CCWGG	4 cut(s)	471, 624, 828, 1855
BstNSI	RCATGY	6 cut(s)	575, 910, 1077, 1132, 1166, 1905
BstPI	GGTNACC	1 cut(s)	1500
BstSCI	CCNGG	7 cut(s)	148, 149, 165, 469, 622, 826, 1853
BstSFI	CTRYAG	1 cut(s)	1106
BstSLI	GKGCMC	1 cut(s)	1961
BstV1I	GCAGC	7 cut(s)	59, 85, 171, 174, 1092, 1233, 1570
BstV2I	GAAGAC	1 cut(s)	1353
BstX2I	RGATCY	4 cut(s)	758, 989, 1210, 1850
BstXI	CCANNNNNNTGG	1 cut(s)	1936
BstYI	RGATCY	4 cut(s)	758, 989, 1210, 1850
BsuRI	GGCC	1 cut(s)	602
BtgI	CCRYGG	3 cut(s)	93, 383, 1935
BtsCI	GGATG	2 cut(s)	250, 406
BtsI	GCAGTG	3 cut(s)	993, 1546, 1959
BtsIMutI	CAGTG	6 cut(s)	993, 1306, 1366, 1546, 1800, 1959
Cac8I	GCNNGC	3 cut(s)	216, 573, 1271
Cfr13I	GGNCC	5 cut(s)	203, 380, 434, 600, 1805
Cfr9I	CCCGGG	1 cut(s)	149
CseI	GACGC	1 cut(s)	90
Csp6I	GTAC	3 cut(s)	356, 947, 1402
CspCI	CAANNNNNGTGG	2 cut(s)	1401, 1436
CviQI	GTAC	3 cut(s)	356, 947, 1402
DdeI	CTNAG	6 cut(s)	612, 1122, 1193, 1228, 1587, 1661
DpnI	GATC	9 cut(s)	322, 760, 802, 870, 991, 1033, 1101, 1212, 1852
DpnII	GATC	9 cut(s)	320, 758, 800, 868, 989, 1031, 1099, 1210, 1850
DraI	TTTAAA	1 cut(s)	516
DriI	GACNNNNNGTC	1 cut(s)	1483
Eam1104I	CTCTTC	1 cut(s)	1905
Eam1105I	GACNNNNNGTC	1 cut(s)	1483
EarI	CTCTTC	1 cut(s)	1905
Ecl136II	GAGCTC	1 cut(s)	108
Eco130I	CCWWGG	2 cut(s)	383, 1636
Eco24I	GRGCYC	1 cut(s)	110
Eco31I	GGTCTC	1 cut(s)	1755
Eco47I	GGWCC	4 cut(s)	203, 380, 434, 1805
Eco53kI	GAGCTC	1 cut(s)	108
Eco57I	CTGAAG	3 cut(s)	1194, 1259, 1877
Eco88I	CYCGRG	1 cut(s)	149
Eco91I	GGTNACC	1 cut(s)	1500
EcoICRI	GAGCTC	1 cut(s)	108
EcoO65I	GGTNACC	1 cut(s)	1500
EcoRI	GAATTC	3 cut(s)	1285, 1318, 1325
EcoRII	CCWGG	4 cut(s)	469, 622, 826, 1853
EcoT14I	CCWWGG	2 cut(s)	383, 1636
EcoT22I	ATGCAT	3 cut(s)	573, 588, 1831
EcoT38I	GRGCYC	1 cut(s)	110
ErhI	CCWWGG	2 cut(s)	383, 1636
FauI	CCCGC	1 cut(s)	720
Fnu4HI	GCNGC	7 cut(s)	73, 99, 160, 163, 1106, 1222, 1584
FokI	GGATG	2 cut(s)	257, 413
FriOI	GRGCYC	1 cut(s)	110
Fsp4HI	GCNGC	7 cut(s)	73, 99, 160, 163, 1106, 1222, 1584
FspBI	CTAG	5 cut(s)	771, 1215, 1386, 1488, 2008
GluI	GCNGC	7 cut(s)	73, 99, 160, 163, 1106, 1222, 1584
GsuI	CTGGAG	2 cut(s)	165, 1099
HaeIII	GGCC	1 cut(s)	602
HapII	CCGG	2 cut(s)	150, 167
HgaI	GACGC	1 cut(s)	90
HincII	GTYRAC	2 cut(s)	187, 1357
HindII	GTYRAC	2 cut(s)	187, 1357
HindIII	AAGCTT	1 cut(s)	1271
HpaI	GTTAAC	1 cut(s)	187
HpaII	CCGG	2 cut(s)	150, 167
HphI	GGTGA	3 cut(s)	138, 1494, 1960
Hpy166II	GTNNAC	4 cut(s)	187, 1264, 1357, 1899
Hpy8I	GTNNAC	4 cut(s)	187, 1264, 1357, 1899
Hpy99I	CGWCG	1 cut(s)	106
HpyAV	CCTTC	5 cut(s)	113, 346, 621, 1603, 1617
HpyCH4III	ACNGT	7 cut(s)	1301, 1334, 1361, 1369, 1743, 1775, 1844
HpyCH4IV	ACGT	2 cut(s)	545, 844
HpyF10VI	GCNNNNNNNGC	4 cut(s)	337, 346, 608, 1826
HpyF3I	CTNAG	6 cut(s)	612, 1122, 1193, 1228, 1587, 1661
HpySE526I	ACGT	2 cut(s)	545, 844
KspAI	GTTAAC	1 cut(s)	187
Kzo9I	GATC	9 cut(s)	320, 758, 800, 868, 989, 1031, 1099, 1210, 1850
Lsp1109I	GCAGC	7 cut(s)	59, 85, 171, 174, 1092, 1233, 1570
LweI	GCATC	3 cut(s)	349, 961, 1838
MaeI	CTAG	5 cut(s)	771, 1215, 1386, 1488, 2008
MaeII	ACGT	2 cut(s)	545, 844
MaeIII	GTNAC	6 cut(s)	144, 728, 1500, 1769, 1966, 2002
MalI	GATC	9 cut(s)	322, 760, 802, 870, 991, 1033, 1101, 1212, 1852
MbiI	CCGCTC	1 cut(s)	1046
MboI	GATC	9 cut(s)	320, 758, 800, 868, 989, 1031, 1099, 1210, 1850
MfeI	CAATTG	1 cut(s)	875
MflI	RGATCY	4 cut(s)	758, 989, 1210, 1850
MhlI	GDGCHC	2 cut(s)	110, 1961
MlyI	GAGTC	4 cut(s)	139, 226, 382, 1241
MmeI	TCCRAC	2 cut(s)	209, 1802
Mph1103I	ATGCAT	3 cut(s)	573, 588, 1831
MslI	CAYNNNNRTG	1 cut(s)	905
MspA1I	CMGCKG	1 cut(s)	1105
MspCI	CTTAAG	1 cut(s)	140
MspI	CCGG	2 cut(s)	150, 167
MspR9I	CCNGG	7 cut(s)	150, 151, 167, 471, 624, 828, 1855
MunI	CAATTG	1 cut(s)	875
Mva1269I	GAATGC	2 cut(s)	265, 588
MvaI	CCWGG	4 cut(s)	471, 624, 828, 1855
MwoI	GCNNNNNNNGC	4 cut(s)	337, 346, 608, 1826
NciI	CCSGG	3 cut(s)	150, 151, 167
NcoI	CCATGG	1 cut(s)	383
NdeII	GATC	9 cut(s)	320, 758, 800, 868, 989, 1031, 1099, 1210, 1850
NlaIV	GGNNCC	1 cut(s)	1239
NmeAIII	GCCGAG	1 cut(s)	518
NmuCI	GTSAC	4 cut(s)	144, 1500, 1769, 1966
NsiI	ATGCAT	3 cut(s)	573, 588, 1831
NspI	RCATGY	6 cut(s)	575, 910, 1077, 1132, 1166, 1905
PaeI	GCATGC	1 cut(s)	575
PciI	ACATGT	4 cut(s)	906, 1073, 1128, 1901
PcsI	WCGNNNNNNNCGW	1 cut(s)	101
PctI	GAATGC	2 cut(s)	265, 588
PfoI	TCCNGGA	1 cut(s)	1853
PkrI	GCNGC	7 cut(s)	74, 100, 161, 164, 1107, 1223, 1585
PleI	GAGTC	4 cut(s)	138, 226, 382, 1240
PpsI	GAGTC	4 cut(s)	138, 226, 382, 1240
Ppu21I	YACGTR	1 cut(s)	845
PscI	ACATGT	4 cut(s)	906, 1073, 1128, 1901
PshBI	ATTAAT	1 cut(s)	1794
Psp124BI	GAGCTC	1 cut(s)	110
Psp6I	CCWGG	4 cut(s)	469, 622, 826, 1853
PspEI	GGTNACC	1 cut(s)	1500
PspGI	CCWGG	4 cut(s)	469, 622, 826, 1853
PspN4I	GGNNCC	1 cut(s)	1239
PspPI	GGNCC	5 cut(s)	203, 380, 434, 600, 1805
PstI	CTGCAG	1 cut(s)	1110
PsuI	RGATCY	4 cut(s)	758, 989, 1210, 1850
PvuII	CAGCTG	1 cut(s)	1105
RsaI	GTAC	3 cut(s)	357, 948, 1403
RsaNI	GTAC	3 cut(s)	356, 947, 1402
RseI	CAYNNNNRTG	1 cut(s)	905
SacI	GAGCTC	1 cut(s)	110
SatI	GCNGC	7 cut(s)	73, 99, 160, 163, 1106, 1222, 1584
Sau3AI	GATC	9 cut(s)	320, 758, 800, 868, 989, 1031, 1099, 1210, 1850
Sau96I	GGNCC	5 cut(s)	203, 380, 434, 600, 1805
SchI	GAGTC	4 cut(s)	139, 226, 382, 1241
ScrFI	CCNGG	7 cut(s)	150, 151, 167, 471, 624, 828, 1855
SduI	GDGCHC	2 cut(s)	110, 1961
SfaNI	GCATC	3 cut(s)	349, 961, 1838
SfcI	CTRYAG	1 cut(s)	1106
SinI	GGWCC	4 cut(s)	203, 380, 434, 1805
SmaI	CCCGGG	1 cut(s)	151
SmiI	ATTTAAAT	1 cut(s)	516
SmiMI	CAYNNNNRTG	1 cut(s)	905
SmlI	CTYRAG	3 cut(s)	140, 390, 1752
SmoI	CTYRAG	3 cut(s)	140, 390, 1752
SphI	GCATGC	1 cut(s)	575
SsiI	CCGC	5 cut(s)	713, 1044, 1067, 1134, 1618
SspI	AATATT	1 cut(s)	308
SspMI	CTAG	5 cut(s)	771, 1215, 1386, 1488, 2008
SstI	GAGCTC	1 cut(s)	110
StyD4I	CCNGG	7 cut(s)	148, 149, 165, 469, 622, 826, 1853
StyI	CCWWGG	2 cut(s)	383, 1636
SwaI	ATTTAAAT	1 cut(s)	516
TaaI	ACNGT	7 cut(s)	1301, 1334, 1361, 1369, 1743, 1775, 1844
TaiI	ACGT	2 cut(s)	548, 847
TaqI	TCGA	2 cut(s)	104, 1555
TatI	WGTACW	1 cut(s)	1401
TscAI	CASTG	6 cut(s)	1000, 1306, 1366, 1546, 1807, 1966
TseFI	GTSAC	4 cut(s)	144, 1500, 1769, 1966
TseI	GCWGC	7 cut(s)	72, 98, 159, 162, 1105, 1221, 1583
Tsp45I	GTSAC	4 cut(s)	144, 1500, 1769, 1966
TspDTI	ATGAA	5 cut(s)	870, 1128, 1173, 1386, 1422
TspGWI	ACGGA	1 cut(s)	1425
TspMI	CCCGGG	1 cut(s)	149
TspRI	CASTG	6 cut(s)	1000, 1306, 1366, 1546, 1807, 1966
Vha464I	CTTAAG	1 cut(s)	140
VpaK11BI	GGWCC	4 cut(s)	203, 380, 434, 1805
VspI	ATTAAT	1 cut(s)	1794
XapI	RAATTY	4 cut(s)	1244, 1285, 1318, 1325
XceI	RCATGY	6 cut(s)	575, 910, 1077, 1132, 1166, 1905
XcmI	CCANNNNNNNNNTGG	1 cut(s)	584
XmaI	CCCGGG	1 cut(s)	149
XspI	CTAG	5 cut(s)	771, 1215, 1386, 1488, 2008
Zsp2I	ATGCAT	3 cut(s)	573, 588, 1831

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.