Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0007734

Physical Location & Seq

Genomic Coordinates Forward (+)

36686758 .. 36692475

Gene Structure 5718 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00414390.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2007 bp

ATGAGCTTCAATTTGATTCCTTCTACTTCTTCGCAACCAGAGGGGAGAAGTGAAGTTCCGATAGAGGAGTGCTGCCTTGTGAATAAGCAATCCACAGCTGCGTCGAGCTCGGATTCCGAAGGAAGTGAGAGTCCTGTTCTTAAGTCCCCCGGGATTGGCAGCAGCCCGGCAGAGGCTTCTCCAGTTAACAAGAGGATTACTGGTCCTATTAGGCGAGCAAAGGGTGGTTGGACTCCACAGGAGGATGAGACATTGAGGAATGCAGTTGCAAAGTTTAAGGGGAAGAACTGGAAGAAAATAGCTCAATATTTTCCTGATAGATCAGAAGTGCAATGTCTGCATCGGTGGCAGAAGGTTCTAAATCCAGAACTTGTTAAAGGACCATGGACTCAAGAGGAGGATGATAAAATCGTTGAACTGGTAGCAAAGTATGGACCTACAAAATGGTCGCTAATATCGAAGTCTTTGCCTGGTCGTATAGGAAAACAATGCCGAGAGAGGTGGCACAATCATTTAAATCCAGATATAAAGAGGGAGGCTTGGACGTTGGTGGAGGAATTAGCCCTTATGCATGCCCACCGAATGCATGGGAACAAGTGGGCCGAAATAGCTAAGGCTTTACCTGGAAGGACTGATAACGCAATAAAGAATCATTGGAATAGTTCCTTGAAGAAGAAATTAGATTTCTATTTGGCAACTGGGCAACTTCCCCCGCCACCAAAGAATAGTTACCCGAATGTTCCTAAAGAGACAAATAGATCCATTGCAACTAGAAGATTGCTTGTTGGCTTAGCTAAAGGATCAGATTCAACTGCTCGGACATTGCCTGGAAATGCAGACACACGTAAAATAGATGAAGATGGCAAGGATCAATTGCAGTCCTCTGAACCTCTTGACATGGACATGTGCGCTTTCTATTTGGCGACTGGGCAACTTCCACCAGTACCAAAAAATAGTTTCCCAAATGATGCTAAAGAGACAAATAGATCCACTGCAACTACAAGATTGCTTGTTGATTCGGATAAAGGATCAGATTCAACTGCTCACACATTGTCTGTAAATGCAGACACATGTAAAATAGATGATAATGGCAAGGATCAACTGCAGTCCTCCGGCTCTCAGGACATGTGCGGGTCATCAAGTATTCTTCCAGATGAACATGCTGATTCTGAAGTCGTAGAGTGTAGGCTAAGATTATCTCTTACGGATCCTAGTTGCAGCAACTCAGAGTCGGTGCCAAAATTCTCGAACTTTGCTGTAAACAGCAAGCCTCAGATTGAGAATTCAGGTATTAACAGTGAGCCGAAGTATGAGAATTCTGAATTCAACAGTAAAAAAGTTGAAGACAAAGTTGACAGCGCAACTGTGCCAGTTGAAACTCCTAGCTATGGTTCATTGTACTATGAACCACCACCATTGGACAGCTCTATTCCGTTAGATTCAGGGCTTCCAAACTTGCATTGCTTTCAGCATGACTACAAGTCTAGTCTGAACTCGTCACCTATTAGTTTCTTCACTCCTCCTACTGCAAAGAGCAGTGGCTTATATAATCGAAGCCCTGAATCAATTTTGAAAATAGCTGCTAAGACCTTCCCCAACACTCCTTCTATTTTGCGGAAAAGAAAGTCTGCCCAAGGACATTTACCTCCTAACAAACTTAGGATACTTGATAGTGAATCAATCAGGGAAACGCTCATTGTTCCCGAAGAACAGGAAAGAAACAAAAATAGTGTGGAACTGTCTGGGTTTCAAGATGTAAGTTTGTGTGACAGTCCAACCAGTCAAGGTATTAATACCACCGGTCCTAATGGTAAGGCTTTTAATGCATCTCCTCCATACCGTTTAAGATCCAGGAGGACTGCTGTTTTCAAGTCTGTGGAGAAACAACTTCAGTTTACATGTGAAGAAGAGTATGCTGGTAATTCCAAACCTGTGGGGTTATCTGCAAATGGGGGCACTGCTGTCACCAAAGATTGTTCCCATGCAACAAAGATGGGAGTTACCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001101 GO:0001134 GO:0001135 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0006950 GO:0008150 GO:0008285 GO:0009266 GO:0009409 GO:0009628 GO:0009719 GO:0009723 GO:0009725 GO:0009751 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010564 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0014070 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0032465 GO:0032502 GO:0042127 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0046677 GO:0047484 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0048585 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0051302 GO:0051726 GO:0060255 GO:0065007 GO:0080090 GO:0080134 GO:0097159 GO:0140110 GO:1901000 GO:1901002 GO:1901181 GO:1901363 GO:1901700 GO:1902584 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:2000070 GO:2000112 GO:2000113 GO:2001023 GO:2001024 GO:2001038 GO:2001039 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-binding

Protein Analysis

668

Amino Acids

73.35

Weight (kDa)

8.25

Isoelectric Point (pI)

62.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-binding	PF00249	74 - 120	4.3e-16	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	77 - 134	3.3e-16	Myb-like DNA-binding domain
Myb_DNA-binding	PF00249	126 - 172	6.2e-20	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	129 - 186	2.7e-18	Myb-like DNA-binding domain
Myb_DNA-binding	PF00249	178 - 221	3.5e-16	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	181 - 226	2.1e-07	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007734)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G02320 AT5G02320 AT5G02320
fragaria_vesca	FvH4_6g13670 FvH4_6g13670 FvH4_6g13670 FvH4_6g13670
malus_domestica	MD04G1129200.v1.1 MD12G1141900.v1.1
prunus_persica	Prupe.6G255400_v2.0.a1 Prupe.6G255400_v2.0.a1
pyrus_communis	pycom04g11740 pycom12g13660
rosa_chinensis	RchiOBHm_Chr3g0466541
rosa_laevigata	RLG00000024564
rosa_multiflora	Rmu_sc0003332.1_g000004
rosa_roxburghii	Rroxscaffold_6G00414390
rosa_rugosa	Rorug03G0082300 Rorug03G0082400
rosa_samantha	Rh3AG129400 Rh3BG150700 Rh3CG150500 Rh3DG151400
rosa_wichuraiana	Rw3G012230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1234
AciI	CCGC	3 cut(s)	713, 1131, 1615
AclWI	GGATC	9 cut(s)	753, 808, 876, 981, 1036, 1104, 1202, 1215, 1842
AcsI	RAATTY	4 cut(s)	1241, 1282, 1315, 1322
AcuI	CTGAAG	2 cut(s)	1191, 1874
AfaI	GTAC	2 cut(s)	945, 1400
AfiI	CCNNNNNNNGG	3 cut(s)	155, 172, 1388
AflII	CTTAAG	1 cut(s)	140
AflIII	ACRYGT	5 cut(s)	842, 903, 1070, 1125, 1898
AgeI	ACCGGT	1 cut(s)	1799
AhdI	GACNNNNNGTC	1 cut(s)	1480
AjnI	CCWGG	4 cut(s)	469, 622, 826, 1850
AluBI	AGCT	9 cut(s)	6, 98, 108, 302, 611, 794, 1386, 1425, 1580
AluI	AGCT	9 cut(s)	6, 98, 108, 302, 611, 794, 1386, 1425, 1580
Alw21I	GWGCWC	1 cut(s)	110
Alw26I	GTCTC	3 cut(s)	242, 743, 971
AlwI	GGATC	9 cut(s)	753, 808, 876, 981, 1036, 1104, 1202, 1215, 1842
Ama87I	CYCGRG	1 cut(s)	149
AoxI	GGCC	1 cut(s)	600
ApeKI	GCWGC	6 cut(s)	72, 98, 159, 162, 1218, 1580
ApoI	RAATTY	4 cut(s)	1241, 1282, 1315, 1322
AseI	ATTAAT	1 cut(s)	1791
AsiGI	ACCGGT	1 cut(s)	1799
AspLEI	GCGC	2 cut(s)	911, 1361
AspS9I	GGNCC	5 cut(s)	203, 380, 434, 600, 1802
AsuC2I	CCSGG	3 cut(s)	150, 151, 167
AsuHPI	GGTGA	2 cut(s)	1491, 1957
AvaI	CYCGRG	1 cut(s)	149
AvaII	GGWCC	4 cut(s)	203, 380, 434, 1802
BaeGI	GKGCMC	1 cut(s)	1958
BamHI	GGATCC	1 cut(s)	1207
BanI	GGYRCC	1 cut(s)	1234
BanII	GRGCYC	1 cut(s)	110
BbsI	GAAGAC	1 cut(s)	1350
Bbv12I	GWGCWC	1 cut(s)	110
BbvI	GCAGC	6 cut(s)	59, 85, 171, 174, 1230, 1567
BccI	CCATC	2 cut(s)	854, 1987
BcgI	CGANNNNNNTGC	2 cut(s)	448, 482
BciT130I	CCWGG	4 cut(s)	471, 624, 828, 1852
BciVI	GTATCC	1 cut(s)	1656
BcnI	CCSGG	3 cut(s)	150, 151, 167
BcoDI	GTCTC	3 cut(s)	242, 743, 971
BfaI	CTAG	5 cut(s)	771, 1212, 1383, 1485, 2005
BfmI	CTRYAG	1 cut(s)	1103
BfrI	CTTAAG	1 cut(s)	140
BfuI	GTATCC	1 cut(s)	1656
BisI	GCNGC	6 cut(s)	73, 99, 160, 163, 1219, 1581
BlpI	GCTNAGC	1 cut(s)	790
BlsI	GCNGC	6 cut(s)	74, 100, 161, 164, 1220, 1582
Bme1390I	CCNGG	7 cut(s)	150, 151, 167, 471, 624, 828, 1852
Bme18I	GGWCC	4 cut(s)	203, 380, 434, 1802
BmeRI	GACNNNNNGTC	1 cut(s)	1480
BmeT110I	CYCGRG	1 cut(s)	149
BmgT120I	GGNCC	5 cut(s)	203, 380, 434, 600, 1802
BmiI	GGNNCC	2 cut(s)	1209, 1236
BmrFI	CCNGG	7 cut(s)	150, 151, 167, 471, 624, 828, 1852
BmrI	ACTGGG	2 cut(s)	708, 936
BmsI	GCATC	3 cut(s)	349, 958, 1835
BmuI	ACTGGG	2 cut(s)	708, 936
BpiI	GAAGAC	1 cut(s)	1350
BpmI	CTGGAG	1 cut(s)	165
Bpu10I	CCTNAGC	1 cut(s)	612
Bpu1102I	GCTNAGC	1 cut(s)	790
BpuEI	CTTGAG	1 cut(s)	375
BpuMI	CCSGG	3 cut(s)	150, 151, 167
BsaAI	YACGTR	1 cut(s)	845
BsaJI	CCNNGG	4 cut(s)	148, 149, 383, 1633
BsaWI	WCCGGW	1 cut(s)	1799
Bsc4I	CCNNNNNNNGG	3 cut(s)	155, 172, 1388
Bse118I	RCCGGY	1 cut(s)	1799
Bse1I	ACTGG	9 cut(s)	182, 205, 293, 423, 703, 931, 941, 1370, 1779
Bse3DI	GCAATG	4 cut(s)	338, 762, 821, 1459
BseBI	CCWGG	4 cut(s)	471, 624, 828, 1852
BseDI	CCNNGG	4 cut(s)	148, 149, 383, 1633
BseGI	GGATG	2 cut(s)	250, 406
BseLI	CCNNNNNNNGG	3 cut(s)	155, 172, 1388
BseMI	GCAATG	4 cut(s)	338, 762, 821, 1459
BseMII	CTCAG	3 cut(s)	1133, 1239, 1286
BseNI	ACTGG	9 cut(s)	182, 205, 293, 423, 703, 931, 941, 1370, 1779
BseRI	GAGGAG	4 cut(s)	80, 410, 1509, 1821
BseSI	GKGCMC	1 cut(s)	1958
BseXI	GCAGC	6 cut(s)	59, 85, 171, 174, 1230, 1567
BshFI	GGCC	1 cut(s)	602
BshNI	GGYRCC	1 cut(s)	1234
BshTI	ACCGGT	1 cut(s)	1799
BsiHKAI	GWGCWC	1 cut(s)	110
BsiHKCI	CYCGRG	1 cut(s)	149
BsiSI	CCGG	4 cut(s)	150, 167, 1113, 1800
BslFI	GGGAC	1 cut(s)	130
BslI	CCNNNNNNNGG	3 cut(s)	155, 172, 1388
BsmAI	GTCTC	3 cut(s)	242, 743, 971
BsmFI	GGGAC	1 cut(s)	130
BsmI	GAATGC	2 cut(s)	265, 588
BsnI	GGCC	1 cut(s)	602
BsoBI	CYCGRG	1 cut(s)	149
Bsp1286I	GDGCHC	2 cut(s)	110, 1958
Bsp143I	GATC	9 cut(s)	320, 758, 800, 868, 986, 1028, 1096, 1207, 1847
Bsp1720I	GCTNAGC	1 cut(s)	790
Bsp19I	CCATGG	1 cut(s)	383
BspACI	CCGC	3 cut(s)	713, 1131, 1615
BspANI	GGCC	1 cut(s)	602
BspCNI	CTCAG	3 cut(s)	1132, 1238, 1285
BspLI	GGNNCC	2 cut(s)	1209, 1236
BspMAI	CTGCAG	1 cut(s)	1107
BspPI	GGATC	9 cut(s)	753, 808, 876, 981, 1036, 1104, 1202, 1215, 1842
BspT107I	GGYRCC	1 cut(s)	1234
BspTI	CTTAAG	1 cut(s)	140
BsrDI	GCAATG	4 cut(s)	338, 762, 821, 1459
BsrFI	RCCGGY	1 cut(s)	1799
BsrI	ACTGG	9 cut(s)	182, 205, 293, 423, 703, 931, 941, 1370, 1779
BssAI	RCCGGY	1 cut(s)	1799
BssECI	CCNNGG	4 cut(s)	148, 149, 383, 1633
BssMI	GATC	9 cut(s)	320, 758, 800, 868, 986, 1028, 1096, 1207, 1847
BssT1I	CCWWGG	2 cut(s)	383, 1633
Bst2UI	CCWGG	4 cut(s)	471, 624, 828, 1852
Bst4CI	ACNGT	6 cut(s)	1298, 1331, 1366, 1740, 1772, 1841
Bst6I	CTCTTC	1 cut(s)	1902
BstAFI	CTTAAG	1 cut(s)	140
BstAPI	GCANNNNNTGC	1 cut(s)	337
BstBAI	YACGTR	1 cut(s)	845
BstC8I	GCNNGC	3 cut(s)	216, 573, 1268
BstDEI	CTNAG	8 cut(s)	612, 790, 1119, 1190, 1225, 1272, 1584, 1658
BstDSI	CCRYGG	1 cut(s)	383
BstF5I	GGATG	2 cut(s)	250, 406
BstHHI	GCGC	2 cut(s)	911, 1361
BstKTI	GATC	9 cut(s)	323, 761, 803, 871, 989, 1031, 1099, 1210, 1850
BstMAI	GTCTC	3 cut(s)	242, 743, 971
BstMBI	GATC	9 cut(s)	320, 758, 800, 868, 986, 1028, 1096, 1207, 1847
BstMWI	GCNNNNNNNGC	4 cut(s)	337, 346, 608, 1823
BstNI	CCWGG	4 cut(s)	471, 624, 828, 1852
BstNSI	RCATGY	6 cut(s)	575, 907, 1074, 1129, 1163, 1902
BstSCI	CCNGG	7 cut(s)	148, 149, 165, 469, 622, 826, 1850
BstSFI	CTRYAG	1 cut(s)	1103
BstSLI	GKGCMC	1 cut(s)	1958
BstV1I	GCAGC	6 cut(s)	59, 85, 171, 174, 1230, 1567
BstV2I	GAAGAC	1 cut(s)	1350
BstX2I	RGATCY	4 cut(s)	758, 986, 1207, 1847
BstXI	CCANNNNNNTGG	1 cut(s)	1933
BstYI	RGATCY	4 cut(s)	758, 986, 1207, 1847
BsuI	GTATCC	1 cut(s)	1656
BsuRI	GGCC	1 cut(s)	602
BtgI	CCRYGG	1 cut(s)	383
BtsCI	GGATG	2 cut(s)	250, 406
BtsI	GCAGTG	3 cut(s)	990, 1543, 1956
BtsIMutI	CAGTG	4 cut(s)	990, 1303, 1543, 1956
Cac8I	GCNNGC	3 cut(s)	216, 573, 1268
CfoI	GCGC	2 cut(s)	911, 1361
Cfr10I	RCCGGY	1 cut(s)	1799
Cfr13I	GGNCC	5 cut(s)	203, 380, 434, 600, 1802
Cfr9I	CCCGGG	1 cut(s)	149
CseI	GACGC	1 cut(s)	90
Csp6I	GTAC	2 cut(s)	944, 1399
CspAI	ACCGGT	1 cut(s)	1799
CspCI	CAANNNNNGTGG	2 cut(s)	1398, 1433
CviQI	GTAC	2 cut(s)	944, 1399
DdeI	CTNAG	8 cut(s)	612, 790, 1119, 1190, 1225, 1272, 1584, 1658
DpnI	GATC	9 cut(s)	322, 760, 802, 870, 988, 1030, 1098, 1209, 1849
DpnII	GATC	9 cut(s)	320, 758, 800, 868, 986, 1028, 1096, 1207, 1847
DraI	TTTAAA	1 cut(s)	516
DriI	GACNNNNNGTC	1 cut(s)	1480
Eam1104I	CTCTTC	1 cut(s)	1902
Eam1105I	GACNNNNNGTC	1 cut(s)	1480
EarI	CTCTTC	1 cut(s)	1902
Ecl136II	GAGCTC	1 cut(s)	108
Eco130I	CCWWGG	2 cut(s)	383, 1633
Eco24I	GRGCYC	1 cut(s)	110
Eco47I	GGWCC	4 cut(s)	203, 380, 434, 1802
Eco53kI	GAGCTC	1 cut(s)	108
Eco57I	CTGAAG	2 cut(s)	1191, 1874
Eco88I	CYCGRG	1 cut(s)	149
EcoICRI	GAGCTC	1 cut(s)	108
EcoRI	GAATTC	3 cut(s)	1282, 1315, 1322
EcoRII	CCWGG	4 cut(s)	469, 622, 826, 1850
EcoT14I	CCWWGG	2 cut(s)	383, 1633
EcoT22I	ATGCAT	3 cut(s)	573, 588, 1828
EcoT38I	GRGCYC	1 cut(s)	110
ErhI	CCWWGG	2 cut(s)	383, 1633
FaqI	GGGAC	1 cut(s)	130
FauI	CCCGC	2 cut(s)	720, 1124
Fnu4HI	GCNGC	6 cut(s)	73, 99, 160, 163, 1219, 1581
FokI	GGATG	2 cut(s)	257, 413
FriOI	GRGCYC	1 cut(s)	110
Fsp4HI	GCNGC	6 cut(s)	73, 99, 160, 163, 1219, 1581
FspBI	CTAG	5 cut(s)	771, 1212, 1383, 1485, 2005
GlaI	GCGC	2 cut(s)	910, 1360
GluI	GCNGC	6 cut(s)	73, 99, 160, 163, 1219, 1581
GsuI	CTGGAG	1 cut(s)	165
HaeIII	GGCC	1 cut(s)	602
HapII	CCGG	4 cut(s)	150, 167, 1113, 1800
HgaI	GACGC	1 cut(s)	90
HhaI	GCGC	2 cut(s)	911, 1361
Hin6I	GCGC	2 cut(s)	909, 1359
HinP1I	GCGC	2 cut(s)	909, 1359
HincII	GTYRAC	2 cut(s)	187, 1354
HindII	GTYRAC	2 cut(s)	187, 1354
HpaI	GTTAAC	1 cut(s)	187
HpaII	CCGG	4 cut(s)	150, 167, 1113, 1800
HphI	GGTGA	2 cut(s)	1491, 1957
Hpy166II	GTNNAC	4 cut(s)	187, 1261, 1354, 1896
Hpy8I	GTNNAC	4 cut(s)	187, 1261, 1354, 1896
Hpy99I	CGWCG	1 cut(s)	106
HpyAV	CCTTC	6 cut(s)	30, 113, 346, 621, 1600, 1614
HpyCH4III	ACNGT	6 cut(s)	1298, 1331, 1366, 1740, 1772, 1841
HpyCH4IV	ACGT	2 cut(s)	545, 844
HpyF10VI	GCNNNNNNNGC	4 cut(s)	337, 346, 608, 1823
HpyF3I	CTNAG	8 cut(s)	612, 790, 1119, 1190, 1225, 1272, 1584, 1658
HpySE526I	ACGT	2 cut(s)	545, 844
HspAI	GCGC	2 cut(s)	909, 1359
KspAI	GTTAAC	1 cut(s)	187
Kzo9I	GATC	9 cut(s)	320, 758, 800, 868, 986, 1028, 1096, 1207, 1847
Lsp1109I	GCAGC	6 cut(s)	59, 85, 171, 174, 1230, 1567
LweI	GCATC	3 cut(s)	349, 958, 1835
MaeI	CTAG	5 cut(s)	771, 1212, 1383, 1485, 2005
MaeII	ACGT	2 cut(s)	545, 844
MaeIII	GTNAC	5 cut(s)	728, 1497, 1766, 1963, 1999
MalI	GATC	9 cut(s)	322, 760, 802, 870, 988, 1030, 1098, 1209, 1849
MboI	GATC	9 cut(s)	320, 758, 800, 868, 986, 1028, 1096, 1207, 1847
MfeI	CAATTG	1 cut(s)	872
MflI	RGATCY	4 cut(s)	758, 986, 1207, 1847
MhlI	GDGCHC	2 cut(s)	110, 1958
MlyI	GAGTC	4 cut(s)	139, 226, 382, 1238
MmeI	TCCRAC	2 cut(s)	209, 1799
Mph1103I	ATGCAT	3 cut(s)	573, 588, 1828
MseI	TTAA	9 cut(s)	141, 186, 276, 375, 515, 1293, 1791, 1821, 1844
MslI	CAYNNNNRTG	1 cut(s)	902
MspA1I	CMGCKG	1 cut(s)	98
MspCI	CTTAAG	1 cut(s)	140
MspI	CCGG	4 cut(s)	150, 167, 1113, 1800
MspR9I	CCNGG	7 cut(s)	150, 151, 167, 471, 624, 828, 1852
MunI	CAATTG	1 cut(s)	872
Mva1269I	GAATGC	2 cut(s)	265, 588
MvaI	CCWGG	4 cut(s)	471, 624, 828, 1852
MwoI	GCNNNNNNNGC	4 cut(s)	337, 346, 608, 1823
NciI	CCSGG	3 cut(s)	150, 151, 167
NcoI	CCATGG	1 cut(s)	383
NdeII	GATC	9 cut(s)	320, 758, 800, 868, 986, 1028, 1096, 1207, 1847
NlaIV	GGNNCC	2 cut(s)	1209, 1236
NmeAIII	GCCGAG	1 cut(s)	518
NmuCI	GTSAC	3 cut(s)	1497, 1766, 1963
NsiI	ATGCAT	3 cut(s)	573, 588, 1828
NspI	RCATGY	6 cut(s)	575, 907, 1074, 1129, 1163, 1902
PaeI	GCATGC	1 cut(s)	575
PciI	ACATGT	4 cut(s)	903, 1070, 1125, 1898
PcsI	WCGNNNNNNNCGW	1 cut(s)	455
PctI	GAATGC	2 cut(s)	265, 588
PfoI	TCCNGGA	1 cut(s)	1850
PinAI	ACCGGT	1 cut(s)	1799
PkrI	GCNGC	6 cut(s)	74, 100, 161, 164, 1220, 1582
PleI	GAGTC	4 cut(s)	138, 226, 382, 1237
PpsI	GAGTC	4 cut(s)	138, 226, 382, 1237
Ppu21I	YACGTR	1 cut(s)	845
PscI	ACATGT	4 cut(s)	903, 1070, 1125, 1898
PshBI	ATTAAT	1 cut(s)	1791
Psp124BI	GAGCTC	1 cut(s)	110
Psp6I	CCWGG	4 cut(s)	469, 622, 826, 1850
PspGI	CCWGG	4 cut(s)	469, 622, 826, 1850
PspN4I	GGNNCC	2 cut(s)	1209, 1236
PspPI	GGNCC	5 cut(s)	203, 380, 434, 600, 1802
PstI	CTGCAG	1 cut(s)	1107
PsuI	RGATCY	4 cut(s)	758, 986, 1207, 1847
PvuII	CAGCTG	1 cut(s)	98
RsaI	GTAC	2 cut(s)	945, 1400
RsaNI	GTAC	2 cut(s)	944, 1399
RseI	CAYNNNNRTG	1 cut(s)	902
SacI	GAGCTC	1 cut(s)	110
SaqAI	TTAA	9 cut(s)	141, 186, 276, 375, 515, 1293, 1791, 1821, 1844
SatI	GCNGC	6 cut(s)	73, 99, 160, 163, 1219, 1581
Sau3AI	GATC	9 cut(s)	320, 758, 800, 868, 986, 1028, 1096, 1207, 1847
Sau96I	GGNCC	5 cut(s)	203, 380, 434, 600, 1802
SchI	GAGTC	4 cut(s)	139, 226, 382, 1238
ScrFI	CCNGG	7 cut(s)	150, 151, 167, 471, 624, 828, 1852
SduI	GDGCHC	2 cut(s)	110, 1958
SfaNI	GCATC	3 cut(s)	349, 958, 1835
SfcI	CTRYAG	1 cut(s)	1103
SinI	GGWCC	4 cut(s)	203, 380, 434, 1802
SmaI	CCCGGG	1 cut(s)	151
SmiI	ATTTAAAT	1 cut(s)	516
SmiMI	CAYNNNNRTG	1 cut(s)	902
SmlI	CTYRAG	2 cut(s)	140, 390
SmoI	CTYRAG	2 cut(s)	140, 390
SphI	GCATGC	1 cut(s)	575
SsiI	CCGC	3 cut(s)	713, 1131, 1615
SspI	AATATT	1 cut(s)	308
SspMI	CTAG	5 cut(s)	771, 1212, 1383, 1485, 2005
SstI	GAGCTC	1 cut(s)	110
StyD4I	CCNGG	7 cut(s)	148, 149, 165, 469, 622, 826, 1850
StyI	CCWWGG	2 cut(s)	383, 1633
SwaI	ATTTAAAT	1 cut(s)	516
TaaI	ACNGT	6 cut(s)	1298, 1331, 1366, 1740, 1772, 1841
TaiI	ACGT	2 cut(s)	548, 847
TaqI	TCGA	4 cut(s)	104, 458, 1247, 1552
TatI	WGTACW	1 cut(s)	1398
Tru1I	TTAA	9 cut(s)	141, 186, 276, 375, 515, 1293, 1791, 1821, 1844
Tru9I	TTAA	9 cut(s)	141, 186, 276, 375, 515, 1293, 1791, 1821, 1844
TscAI	CASTG	4 cut(s)	997, 1303, 1543, 1963
TseFI	GTSAC	3 cut(s)	1497, 1766, 1963
TseI	GCWGC	6 cut(s)	72, 98, 159, 162, 1218, 1580
Tsp45I	GTSAC	3 cut(s)	1497, 1766, 1963
TspDTI	ATGAA	4 cut(s)	870, 1170, 1383, 1419
TspGWI	ACGGA	2 cut(s)	1220, 1422
TspMI	CCCGGG	1 cut(s)	149
TspRI	CASTG	4 cut(s)	997, 1303, 1543, 1963
Vha464I	CTTAAG	1 cut(s)	140
VpaK11BI	GGWCC	4 cut(s)	203, 380, 434, 1802
VspI	ATTAAT	1 cut(s)	1791
XapI	RAATTY	4 cut(s)	1241, 1282, 1315, 1322
XceI	RCATGY	6 cut(s)	575, 907, 1074, 1129, 1163, 1902
XcmI	CCANNNNNNNNNTGG	1 cut(s)	584
XmaI	CCCGGG	1 cut(s)	149
XspI	CTAG	5 cut(s)	771, 1212, 1383, 1485, 2005
Zsp2I	ATGCAT	3 cut(s)	573, 588, 1828

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.