Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr12

Orthogroup ID

OG0007734

Physical Location & Seq

Genomic Coordinates Forward (+)

22013467 .. 22018777

Gene Structure 5311 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD12G1141900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1836 bp

ATGAGCTCGATTTCGATTCCCGCCACTTCTTCGCAAGCAGAGGAGGAGATGGCTGGGGCAAAATTAGAGGAGTGTTGCCTTGAGAATAAGCAATCCATGGCTACATCGAGCTCGTCTGTATCCGAAGGCAGTGGCAGTGCTATTATCAAGTCCCCAGGGGCTTGCAGCCCAGCATCTGCTTCTCCTACTCAACGGAGAACTAGTGGTCCTATTAGGCGAGCCAAAGGCGGTTGGACTCCACAAGAGGACGAGACATTAAGGAATGCCGTTGCTGCTTTCAAGGGGAAGAGTTGGAAGAAAATAGCTGAATTTTTTCCTGATAGATCGGAAGTGCAGTGTCTGCATAGATGGCAGAAGGTTCTTAATCCAGAACTTGTTAAAGGACCATGGACTCAAGAGGAGGATGATAAAATAATTGAACTGGTAGCAAAGTATGGACCTACTAAATGGTCATTGATAGCAAAGTCTTTGCCTGGTCGGATAGGAAAACAATGCCGAGAGAGGTGGCACAATCATTTGAATCCTGATATAAAGAAGGAGGCTTGGACGTTGGAAGAGGAATTAGCTCTTATGAAGGCCCACCAGATGCATGGGAACAAGTGGGCCGAAATAGCGAAGGTTTTACCTGGAAGGACTGATAATGCAATAAAGAATCATTGGAATAGTTCCTTGAAGAAAAAACTTGACTTCTATTTGGCTACTGGGAAACTTCCACCACCTCCGAAGTATGGTGCCAAAGAGCCAAGATCCAATGCGACTAAAAAAATACTTGTTCGTTCAACTAAAGGATCAGATTCAACTGCTCAGACATCATCTGGAAATGCAGAAATGTCTAAGCTAGATGAAGATGGAAAGGATCAGTTCGAGTCCGCCGCTCCACCTCAGGATATGGGTGCTTCATCAAGTGTTCACCCAAATGAATGTGCAGATTCTGAAGGTGTAGAATGTGACCTGAGATTATCTTTTATGGATCTTAGTTGCTCTAACTCAGACTCAGGGCCAAAGTTTGATAATTTTGGAGTAAAAAGAAAGCCTCAGATTGAGAATTCTGTCAGTAATGGCCGGGCAGAGTCTGAGAATTGTGGATTTAGCAACCAAATGGACGAAGACAGTGTTAAGACAACATCTTTTCCGTTTGAAACTCCAAGATATGGTTCCTTGTACTATGAGCCACCACCGCTAGAAAGCTCTGTCCAATTCAATTCAGGTTTTTCAAGCATGCATCGCTTGCAGAATGATTACACCTCTAGTCCAAATTTATCACCTATAAGTTTCTTCACTCCTCCTTGTGTGAAGGGCAGTGGTTTATGTAATCAAAGTCCTGAATCAATTTTGAAAATAGCTGCTAAGACCTTCCCCAATACTCCTTCCATTTTGCGAAAGAGAAAGACCATTGGCCAAGGACAATTGCCTTGTAATAAAGTTGCAGTAGTGGATTGTGAATCAGTCAGGGAAATGCTTAATGTTTCTAGTGAACACAAAAACAGTGCGGAAGTTTCTGGATCTCAAGATGGAAGTTTATGTGAGAGTCCAACTAGTAATGGTATCAGTACCATTGGGCCTAATGGTAAGGCGTTTAACGCATCTCCACCATACCGGTTAAGAGCCAGGAGGACTGCCGTTTTCAAGTCTGTGGAGAAACAGCTTGAGTTTACATGTGATGAAGAGTATGATGCTAATTCTATGTCCGTGGAATTATCTGCAAATGGCGGCTCTGCTGTTATCAAAGACTGTACACATCCAACAAAGATGGCTGGACAAAAGAGAGGGCGATTCTTTTTGACGTTGGCTGACACTGTTGAACTGGTGATATTTCCAAGTCCACAGAGCTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001101 GO:0001134 GO:0001135 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0006950 GO:0008150 GO:0008285 GO:0009266 GO:0009409 GO:0009628 GO:0009719 GO:0009723 GO:0009725 GO:0009751 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010564 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0014070 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0032465 GO:0032502 GO:0042127 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0046677 GO:0047484 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0048585 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0051302 GO:0051726 GO:0060255 GO:0065007 GO:0080090 GO:0080134 GO:0097159 GO:0140110 GO:1901000 GO:1901002 GO:1901181 GO:1901363 GO:1901700 GO:1902584 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:2000070 GO:2000112 GO:2000113 GO:2001023 GO:2001024 GO:2001038 GO:2001039 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-binding

Protein Analysis

612

Amino Acids

66.79

Weight (kDa)

8.03

Isoelectric Point (pI)

60.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-binding	PF00249	75 - 121	2.5e-14	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	78 - 134	1.1e-14	Myb-like DNA-binding domain
Myb_DNA-binding	PF00249	127 - 173	1.6e-20	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	130 - 189	6.9e-20	Myb-like DNA-binding domain
Myb_DNA-binding	PF00249	179 - 222	6.7e-18	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	182 - 227	1.5e-09	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007734)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G02320 AT5G02320 AT5G02320
fragaria_vesca	FvH4_6g13670 FvH4_6g13670 FvH4_6g13670 FvH4_6g13670
malus_domestica	MD04G1129200.v1.1 MD12G1141900.v1.1
prunus_persica	Prupe.6G255400_v2.0.a1 Prupe.6G255400_v2.0.a1
pyrus_communis	pycom04g11740 pycom12g13660
rosa_chinensis	RchiOBHm_Chr3g0466541
rosa_laevigata	RLG00000024564
rosa_multiflora	Rmu_sc0003332.1_g000004
rosa_roxburghii	Rroxscaffold_6G00414390
rosa_rugosa	Rorug03G0082300 Rorug03G0082400
rosa_samantha	Rh3AG129400 Rh3BG150700 Rh3CG150500 Rh3DG151400
rosa_wichuraiana	Rw3G012230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	731
AccB7I	CCANNNNNTGG	1 cut(s)	1151
AccBSI	CCGCTC	1 cut(s)	875
AciI	CCGC	7 cut(s)	21, 228, 870, 873, 1178, 1490, 1710
AclWI	GGATC	5 cut(s)	741, 796, 864, 978, 1510
AcoI	YGGCCR	2 cut(s)	1060, 1396
AcsI	RAATTY	3 cut(s)	308, 1045, 1255
AcuI	CTGAAG	1 cut(s)	954
AfaI	GTAC	3 cut(s)	1163, 1552, 1735
AfiI	CCNNNNNNNGG	2 cut(s)	728, 1151
AflIII	ACRYGT	1 cut(s)	1655
AgeI	ACCGGT	1 cut(s)	1596
AhlI	ACTAGT	2 cut(s)	200, 1535
AjnI	CCWGG	4 cut(s)	154, 472, 625, 1607
AjuI	GAANNNNNNNTTGG	2 cut(s)	1138, 1170
AloI	GAACNNNNNNTCC	2 cut(s)	190, 222
AluBI	AGCT	9 cut(s)	6, 111, 305, 566, 838, 1188, 1343, 1645, 1830
AluI	AGCT	9 cut(s)	6, 111, 305, 566, 838, 1188, 1343, 1645, 1830
Alw21I	GWGCWC	2 cut(s)	8, 113
Alw26I	GTCTC	1 cut(s)	245
AlwI	GGATC	5 cut(s)	741, 796, 864, 978, 1510
AlwNI	CAGNNNCTG	4 cut(s)	176, 340, 932, 1073
AoxI	GGCC	6 cut(s)	576, 603, 998, 1060, 1396, 1559
ApeKI	GCWGC	3 cut(s)	165, 272, 1343
ApoI	RAATTY	3 cut(s)	308, 1045, 1255
AsiGI	ACCGGT	1 cut(s)	1596
Asp700I	GAANNNNTTC	1 cut(s)	312
AspS9I	GGNCC	7 cut(s)	206, 383, 437, 577, 603, 998, 1559
AsuC2I	CCSGG	1 cut(s)	1064
AsuHPI	GGTGA	3 cut(s)	902, 1254, 1819
AvaII	GGWCC	3 cut(s)	206, 383, 437
AxyI	CCTNAGG	1 cut(s)	882
BalI	TGGCCA	1 cut(s)	1398
BanI	GGYRCC	1 cut(s)	731
BanII	GRGCYC	2 cut(s)	8, 113
BbsI	GAAGAC	1 cut(s)	1113
Bbv12I	GWGCWC	2 cut(s)	8, 113
BbvI	GCAGC	3 cut(s)	177, 259, 1330
BccI	CCATC	5 cut(s)	43, 342, 842, 1505, 1744
BceAI	ACGGC	2 cut(s)	251, 1604
BciT130I	CCWGG	4 cut(s)	156, 474, 627, 1609
BciVI	GTATCC	1 cut(s)	130
BcnI	CCSGG	1 cut(s)	1064
BcoDI	GTCTC	1 cut(s)	245
BcuI	ACTAGT	2 cut(s)	200, 1535
BfaI	CTAG	6 cut(s)	201, 839, 1181, 1248, 1470, 1536
BfuI	GTATCC	1 cut(s)	130
BisI	GCNGC	5 cut(s)	166, 273, 873, 1344, 1711
BlsI	GCNGC	5 cut(s)	167, 274, 874, 1345, 1712
Bme1390I	CCNGG	5 cut(s)	156, 474, 627, 1064, 1609
Bme18I	GGWCC	3 cut(s)	206, 383, 437
BmgT120I	GGNCC	7 cut(s)	206, 383, 437, 577, 603, 998, 1559
BmiI	GGNNCC	2 cut(s)	733, 1156
BmrFI	CCNGG	5 cut(s)	156, 474, 627, 1064, 1609
BmrI	ACTGGG	1 cut(s)	711
BmsI	GCATC	5 cut(s)	182, 576, 1231, 1592, 1663
BmuI	ACTGGG	1 cut(s)	711
BpiI	GAAGAC	1 cut(s)	1113
BpuEI	CTTGAG	4 cut(s)	101, 378, 1491, 1667
BpuMI	CCSGG	1 cut(s)	1064
BsaJI	CCNNGG	6 cut(s)	96, 154, 155, 386, 1399, 1689
BsaWI	WCCGGW	1 cut(s)	1596
BsaXI	ACNNNNNCTCC	2 cut(s)	187, 217
Bsc4I	CCNNNNNNNGG	2 cut(s)	728, 1151
Bse118I	RCCGGY	1 cut(s)	1596
Bse1I	ACTGG	3 cut(s)	426, 706, 1809
Bse21I	CCTNAGG	1 cut(s)	882
BseBI	CCWGG	4 cut(s)	156, 474, 627, 1609
BseDI	CCNNGG	6 cut(s)	96, 154, 155, 386, 1399, 1689
BseGI	GGATG	2 cut(s)	409, 1738
BseLI	CCNNNNNNNGG	2 cut(s)	728, 1151
BseMII	CTCAG	7 cut(s)	818, 896, 944, 1002, 1008, 1049, 1065
BseNI	ACTGG	3 cut(s)	426, 706, 1809
BseRI	GAGGAG	5 cut(s)	56, 59, 83, 413, 1272
BseXI	GCAGC	3 cut(s)	177, 259, 1330
BseYI	CCCAGC	2 cut(s)	53, 169
BsgI	GTGCAG	2 cut(s)	353, 945
BshFI	GGCC	6 cut(s)	578, 605, 1000, 1062, 1398, 1561
BshNI	GGYRCC	1 cut(s)	731
BshTI	ACCGGT	1 cut(s)	1596
BsiHKAI	GWGCWC	2 cut(s)	8, 113
BsiSI	CCGG	2 cut(s)	1063, 1597
BslFI	GGGAC	1 cut(s)	136
BslI	CCNNNNNNNGG	2 cut(s)	728, 1151
BsmAI	GTCTC	1 cut(s)	245
BsmFI	GGGAC	1 cut(s)	136
BsmI	GAATGC	1 cut(s)	268
BsnI	GGCC	6 cut(s)	578, 605, 1000, 1062, 1398, 1561
Bsp1286I	GDGCHC	2 cut(s)	8, 113
Bsp1407I	TGTACA	1 cut(s)	1733
Bsp143I	GATC	6 cut(s)	323, 746, 788, 856, 970, 1502
Bsp19I	CCATGG	2 cut(s)	96, 386
BspACI	CCGC	7 cut(s)	21, 228, 870, 873, 1178, 1490, 1710
BspANI	GGCC	6 cut(s)	578, 605, 1000, 1062, 1398, 1561
BspCNI	CTCAG	7 cut(s)	817, 895, 945, 1001, 1007, 1048, 1066
BspLI	GGNNCC	2 cut(s)	733, 1156
BspPI	GGATC	5 cut(s)	741, 796, 864, 978, 1510
BspT107I	GGYRCC	1 cut(s)	731
BsrBI	CCGCTC	1 cut(s)	875
BsrFI	RCCGGY	1 cut(s)	1596
BsrGI	TGTACA	1 cut(s)	1733
BsrI	ACTGG	3 cut(s)	426, 706, 1809
BssAI	RCCGGY	1 cut(s)	1596
BssECI	CCNNGG	6 cut(s)	96, 154, 155, 386, 1399, 1689
BssMI	GATC	6 cut(s)	323, 746, 788, 856, 970, 1502
BssT1I	CCWWGG	3 cut(s)	96, 386, 1399
Bst2UI	CCWGG	4 cut(s)	156, 474, 627, 1609
Bst4CI	ACNGT	4 cut(s)	1112, 1487, 1733, 1798
Bst6I	CTCTTC	3 cut(s)	281, 549, 1659
BstAPI	GCANNNNNTGC	2 cut(s)	340, 1228
BstAUI	TGTACA	1 cut(s)	1733
BstC8I	GCNNGC	5 cut(s)	36, 163, 219, 1220, 1229
BstDSI	CCRYGG	3 cut(s)	96, 386, 1689
BstF5I	GGATG	2 cut(s)	409, 1738
BstKTI	GATC	6 cut(s)	326, 749, 791, 859, 973, 1505
BstMAI	GTCTC	1 cut(s)	245
BstMBI	GATC	6 cut(s)	323, 746, 788, 856, 970, 1502
BstMWI	GCNNNNNNNGC	8 cut(s)	272, 340, 349, 611, 1177, 1224, 1228, 1580
BstNI	CCWGG	4 cut(s)	156, 474, 627, 1609
BstNSI	RCATGY	2 cut(s)	1222, 1659
BstSCI	CCNGG	5 cut(s)	154, 472, 625, 1062, 1607
BstV1I	GCAGC	3 cut(s)	177, 259, 1330
BstV2I	GAAGAC	1 cut(s)	1113
BstX2I	RGATCY	3 cut(s)	746, 970, 1502
BstXI	CCANNNNNNTGG	1 cut(s)	590
BstYI	RGATCY	3 cut(s)	746, 970, 1502
Bsu36I	CCTNAGG	1 cut(s)	882
BsuI	GTATCC	1 cut(s)	130
BsuRI	GGCC	6 cut(s)	578, 605, 1000, 1062, 1398, 1561
BtgI	CCRYGG	3 cut(s)	96, 386, 1689
BtgZI	GCGATG	1 cut(s)	1208
BtsCI	GGATG	2 cut(s)	409, 1738
BtsI	GCAGTG	4 cut(s)	136, 142, 341, 1306
BtsIMutI	CAGTG	7 cut(s)	136, 142, 341, 1117, 1306, 1492, 1794
Cac8I	GCNNGC	5 cut(s)	36, 163, 219, 1220, 1229
CaiI	CAGNNNCTG	4 cut(s)	176, 340, 932, 1073
Cfr10I	RCCGGY	1 cut(s)	1596
Cfr13I	GGNCC	7 cut(s)	206, 383, 437, 577, 603, 998, 1559
Csp6I	GTAC	3 cut(s)	1162, 1551, 1734
CspAI	ACCGGT	1 cut(s)	1596
CviAII	CATG	5 cut(s)	97, 387, 590, 1219, 1656
CviQI	GTAC	3 cut(s)	1162, 1551, 1734
DpnI	GATC	6 cut(s)	325, 748, 790, 858, 972, 1504
DpnII	GATC	6 cut(s)	323, 746, 788, 856, 970, 1502
EaeI	YGGCCR	2 cut(s)	1060, 1396
Eam1104I	CTCTTC	3 cut(s)	281, 549, 1659
EarI	CTCTTC	3 cut(s)	281, 549, 1659
EciI	GGCGGA	1 cut(s)	859
Ecl136II	GAGCTC	2 cut(s)	6, 111
Eco130I	CCWWGG	3 cut(s)	96, 386, 1399
Eco24I	GRGCYC	2 cut(s)	8, 113
Eco47I	GGWCC	3 cut(s)	206, 383, 437
Eco53kI	GAGCTC	2 cut(s)	6, 111
Eco57I	CTGAAG	1 cut(s)	954
Eco81I	CCTNAGG	1 cut(s)	882
EcoICRI	GAGCTC	2 cut(s)	6, 111
EcoRI	GAATTC	1 cut(s)	1045
EcoRII	CCWGG	4 cut(s)	154, 472, 625, 1607
EcoT14I	CCWWGG	3 cut(s)	96, 386, 1399
EcoT22I	ATGCAT	2 cut(s)	591, 1224
EcoT38I	GRGCYC	2 cut(s)	8, 113
ErhI	CCWWGG	3 cut(s)	96, 386, 1399
FaeI	CATG	5 cut(s)	100, 390, 593, 1222, 1659
FaqI	GGGAC	1 cut(s)	136
FatI	CATG	5 cut(s)	96, 386, 589, 1218, 1655
FauI	CCCGC	1 cut(s)	28
Fnu4HI	GCNGC	5 cut(s)	166, 273, 873, 1344, 1711
FokI	GGATG	2 cut(s)	416, 1725
FriOI	GRGCYC	2 cut(s)	8, 113
Fsp4HI	GCNGC	5 cut(s)	166, 273, 873, 1344, 1711
FspBI	CTAG	6 cut(s)	201, 839, 1181, 1248, 1470, 1536
GluI	GCNGC	5 cut(s)	166, 273, 873, 1344, 1711
GsaI	CCCAGC	2 cut(s)	57, 173
HaeIII	GGCC	6 cut(s)	578, 605, 1000, 1062, 1398, 1561
HapII	CCGG	2 cut(s)	1063, 1597
Hin1II	CATG	5 cut(s)	100, 390, 593, 1222, 1659
HpaII	CCGG	2 cut(s)	1063, 1597
HphI	GGTGA	3 cut(s)	902, 1254, 1819
Hpy166II	GTNNAC	5 cut(s)	910, 1475, 1653, 1736, 1823
Hpy188III	TCNNGA	9 cut(s)	317, 368, 395, 524, 816, 884, 1322, 1500, 1508
Hpy8I	GTNNAC	5 cut(s)	910, 1475, 1653, 1736, 1823
HpyCH4III	ACNGT	4 cut(s)	1112, 1487, 1733, 1798
HpyCH4IV	ACGT	2 cut(s)	548, 1784
HpyF10VI	GCNNNNNNNGC	8 cut(s)	272, 340, 349, 611, 1177, 1224, 1228, 1580
HpySE526I	ACGT	2 cut(s)	548, 1784
Hsp92II	CATG	5 cut(s)	100, 390, 593, 1222, 1659
Kzo9I	GATC	6 cut(s)	323, 746, 788, 856, 970, 1502
LmnI	GCTCC	1 cut(s)	880
Lsp1109I	GCAGC	3 cut(s)	177, 259, 1330
LweI	GCATC	5 cut(s)	182, 576, 1231, 1592, 1663
MaeI	CTAG	6 cut(s)	201, 839, 1181, 1248, 1470, 1536
MaeII	ACGT	2 cut(s)	548, 1784
MaeIII	GTNAC	1 cut(s)	947
MalI	GATC	6 cut(s)	325, 748, 790, 858, 972, 1504
MbiI	CCGCTC	1 cut(s)	875
MboI	GATC	6 cut(s)	323, 746, 788, 856, 970, 1502
MboII	GAAGA	9 cut(s)	21, 298, 307, 566, 685, 857, 1118, 1267, 1676
MfeI	CAATTG	1 cut(s)	1406
MflI	RGATCY	3 cut(s)	746, 970, 1502
MhlI	GDGCHC	2 cut(s)	8, 113
MlsI	TGGCCA	1 cut(s)	1398
MluNI	TGGCCA	1 cut(s)	1398
MlyI	GAGTC	6 cut(s)	229, 385, 875, 986, 1079, 1537
MmeI	TCCRAC	6 cut(s)	212, 272, 458, 531, 1556, 1766
Mox20I	TGGCCA	1 cut(s)	1398
Mph1103I	ATGCAT	2 cut(s)	591, 1224
MroXI	GAANNNNTTC	1 cut(s)	312
MscI	TGGCCA	1 cut(s)	1398
MseI	TTAA	7 cut(s)	257, 363, 378, 1116, 1461, 1578, 1601
MslI	CAYNNNNRTG	1 cut(s)	915
Msp20I	TGGCCA	1 cut(s)	1398
MspI	CCGG	2 cut(s)	1063, 1597
MspR9I	CCNGG	5 cut(s)	156, 474, 627, 1064, 1609
MunI	CAATTG	1 cut(s)	1406
Mva1269I	GAATGC	1 cut(s)	268
MvaI	CCWGG	4 cut(s)	156, 474, 627, 1609
MwoI	GCNNNNNNNGC	8 cut(s)	272, 340, 349, 611, 1177, 1224, 1228, 1580
NciI	CCSGG	1 cut(s)	1064
NcoI	CCATGG	2 cut(s)	96, 386
NdeII	GATC	6 cut(s)	323, 746, 788, 856, 970, 1502
NlaIII	CATG	5 cut(s)	100, 390, 593, 1222, 1659
NlaIV	GGNNCC	2 cut(s)	733, 1156
NmeAIII	GCCGAG	1 cut(s)	521
NmuCI	GTSAC	1 cut(s)	947
NsiI	ATGCAT	2 cut(s)	591, 1224
NspI	RCATGY	2 cut(s)	1222, 1659
PaeI	GCATGC	1 cut(s)	1222
PasI	CCCWGGG	1 cut(s)	155
PciI	ACATGT	1 cut(s)	1655
PctI	GAATGC	1 cut(s)	268
PdmI	GAANNNNTTC	1 cut(s)	312
PfeI	GAWTC	8 cut(s)	16, 520, 652, 794, 929, 1325, 1442, 1773
PflMI	CCANNNNNTGG	1 cut(s)	1151
PinAI	ACCGGT	1 cut(s)	1596
PkrI	GCNGC	5 cut(s)	167, 274, 874, 1345, 1712
PleI	GAGTC	6 cut(s)	229, 385, 874, 986, 1078, 1536
PpsI	GAGTC	6 cut(s)	229, 385, 874, 986, 1078, 1536
PscI	ACATGT	1 cut(s)	1655
Psp124BI	GAGCTC	2 cut(s)	8, 113
Psp6I	CCWGG	4 cut(s)	154, 472, 625, 1607
PspFI	CCCAGC	2 cut(s)	53, 169
PspGI	CCWGG	4 cut(s)	154, 472, 625, 1607
PspN4I	GGNNCC	2 cut(s)	733, 1156
PspPI	GGNCC	7 cut(s)	206, 383, 437, 577, 603, 998, 1559
PstNI	CAGNNNCTG	4 cut(s)	176, 340, 932, 1073
PsuI	RGATCY	3 cut(s)	746, 970, 1502
RsaI	GTAC	3 cut(s)	1163, 1552, 1735
RsaNI	GTAC	3 cut(s)	1162, 1551, 1734
RseI	CAYNNNNRTG	1 cut(s)	915
SacI	GAGCTC	2 cut(s)	8, 113
SaqAI	TTAA	7 cut(s)	257, 363, 378, 1116, 1461, 1578, 1601
SatI	GCNGC	5 cut(s)	166, 273, 873, 1344, 1711
Sau3AI	GATC	6 cut(s)	323, 746, 788, 856, 970, 1502
Sau96I	GGNCC	7 cut(s)	206, 383, 437, 577, 603, 998, 1559
SchI	GAGTC	6 cut(s)	229, 385, 875, 986, 1079, 1537
ScrFI	CCNGG	5 cut(s)	156, 474, 627, 1064, 1609
SduI	GDGCHC	2 cut(s)	8, 113
SfaNI	GCATC	5 cut(s)	182, 576, 1231, 1592, 1663
SinI	GGWCC	3 cut(s)	206, 383, 437
SmiMI	CAYNNNNRTG	1 cut(s)	915
SmlI	CTYRAG	4 cut(s)	80, 393, 1506, 1646
SmoI	CTYRAG	4 cut(s)	80, 393, 1506, 1646
SpeI	ACTAGT	2 cut(s)	200, 1535
SphI	GCATGC	1 cut(s)	1222
SsiI	CCGC	7 cut(s)	21, 228, 870, 873, 1178, 1490, 1710
SspMI	CTAG	6 cut(s)	201, 839, 1181, 1248, 1470, 1536
SstI	GAGCTC	2 cut(s)	8, 113
StyD4I	CCNGG	5 cut(s)	154, 472, 625, 1062, 1607
StyI	CCWWGG	3 cut(s)	96, 386, 1399
TaaI	ACNGT	4 cut(s)	1112, 1487, 1733, 1798
TaiI	ACGT	2 cut(s)	551, 1787
TaqI	TCGA	4 cut(s)	8, 14, 107, 864
TatI	WGTACW	2 cut(s)	1161, 1733
TauI	GCSGC	2 cut(s)	875, 1713
TfiI	GAWTC	8 cut(s)	16, 520, 652, 794, 929, 1325, 1442, 1773
Tru1I	TTAA	7 cut(s)	257, 363, 378, 1116, 1461, 1578, 1601
Tru9I	TTAA	7 cut(s)	257, 363, 378, 1116, 1461, 1578, 1601
TscAI	CASTG	7 cut(s)	136, 142, 341, 1117, 1306, 1492, 1801
TseFI	GTSAC	1 cut(s)	947
TseI	GCWGC	3 cut(s)	165, 272, 1343
Tsp45I	GTSAC	1 cut(s)	947
TspDTI	ATGAA	5 cut(s)	587, 858, 888, 933, 1677
TspGWI	ACGGA	3 cut(s)	208, 1122, 1678
TspRI	CASTG	7 cut(s)	136, 142, 341, 1117, 1306, 1492, 1801
Van91I	CCANNNNNTGG	1 cut(s)	1151
VpaK11BI	GGWCC	3 cut(s)	206, 383, 437
XapI	RAATTY	3 cut(s)	308, 1045, 1255
XceI	RCATGY	2 cut(s)	1222, 1659
XcmI	CCANNNNNNNNNTGG	1 cut(s)	587
XmnI	GAANNNNTTC	1 cut(s)	312
XspI	CTAG	6 cut(s)	201, 839, 1181, 1248, 1470, 1536
Zsp2I	ATGCAT	2 cut(s)	591, 1224

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.