Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0009869

Physical Location & Seq

Genomic Coordinates Reverse (-)

29347412 .. 29348530

Gene Structure 1119 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1208600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1119 bp

ATGGCTCCGCTCTTATCCTGCGCCGCCAAGCATGTGGTCCTCGCTCTCTTCCTCCTCTTCTTCCTCTCACCGGTTGGAGCCCAGCCCAGTCCGGACGGGTCCGACCCGTACCAGTACCAGCGGTTCAGCCCGCCGTTGGCCATCATCATCGCCGTACTGATCGCCGCCCTCTTCCTCATGGTTTTCTTCTCGGTCTACGTCCGCCGCTGCTCCGACACCTACCAAGCCGACACCATCCGCGCCGGCGGCTCCCACACCGGCCGATCCAGACGCGGCGCAGCATCACGCGGTCTCGACGCCGCCGTCCTCGACACCTTCCCCACCCTTGACTACGCCGAGATCAAAGGGCTTAAAATAGGGAAAGAGGAGCTCGAGTGCGCCGTCTGCTTAAACGAATTCGAGGACGACGAAATGCTGCGTTTGATCCCCAAATGCGACCACGTGTTCCACACTGACTGCATCGACGTGTGGCTGATGTCGCACACCACGTGTCCCGTCTGCCGGGCCAACCTCGTTCCGCAGCCCTGCGACTCGGCACCACAACTCACTGAGTTGGGATCGGAGCAGGAGGAGGGCGACGTCGAAGCTCAAAACGACGCCGTAGACGCGGAACGGGAGAGAGATGACCTGGGAATGCTAGCACGGCAAGAACCTGAGGTGTTGAACATAAACCAGACGCTTAATCGGAACCGTACACGTGGATCGAGATCGAGCAGGCTGCGGAGATTGTTCTCGCGGTCACACTCGACCGGACACTCTGTGGTCCAACCGGGAGAAGACACTGAGCGGTTCACCTTGAGGTTACCGGTTGAAGTCAGGAAACAGATTATGAACCGGAAGCTGAACCGGTCCACTAGCTTATTGGTCTTACCCCGAGAAGGGAGTTCGCGGCGTGGGCCCCGAACCGGCGAGAGTAGCAGTATTAATAGAGTGAGGAGCTACAGAAGGCTCGAGCCGTTGGACCGGCAATTTAGATCGGACCGGTGGGTGTTCAACAAAACGCCACCATTTCTCACAAGGATGTCAAGTCGTTCGTCGCCGAAAGTGGCGGCAATTGACGGTGAGACACCGGCCAAGCCGGAAATGTCTAGGAGCAGTTCGGCTCGGCCTCCGGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002376 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009605 GO:0009607 GO:0009617 GO:0009719 GO:0009725 GO:0009737 GO:0009814 GO:0009816 GO:0009987 GO:0009991 GO:0010033 GO:0010200 GO:0010243 GO:0010498 GO:0016020 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019941 GO:0030163 GO:0031667 GO:0031668 GO:0031669 GO:0032446 GO:0033993 GO:0036211 GO:0042221 GO:0042493 GO:0042742 GO:0043161 GO:0043170 GO:0043207 GO:0043412 GO:0043562 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044464 GO:0045087 GO:0050896 GO:0051603 GO:0051704 GO:0051707 GO:0051716 GO:0061630 GO:0061659 GO:0070647 GO:0071496 GO:0071704 GO:0071944 GO:0097305 GO:0098542 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1901698 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-RING_2

Protein Analysis

373

Amino Acids

41.67

Weight (kDa)

8.74

Isoelectric Point (pI)

67.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RING_2	PF13639	125 - 168	9.6e-14	Ring finger domain
zf-RING_11	PF17123	125 - 154	2.6e-10	RING-like zinc finger
zf-C3HC4_2	PF13923	125 - 167	3.7e-08	Zinc finger, C3HC4 type (RING finger)
zf-rbx1	PF12678	126 - 168	6.5e-08	RING-H2 zinc finger domain
zf-C3HC4	PF00097	126 - 167	9.5e-07	Zinc finger, C3HC4 type (RING finger)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009869)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05200 AT5G27420
fragaria_vesca	FvH4_6g05450
malus_domestica	MD04G1208600.v1.1 MD12G1222600.v1.1
prunus_persica	Prupe.6G329500_v2.0.a1
pyrus_communis	pycom04g18470 pycom12g20880
rosa_chinensis	RchiOBHm_Chr3g0454221
rosa_laevigata	RLG00000025475
rosa_multiflora	Rmu_sc0007628.1_g000006 Rmu_sc0026184.1_g000001 Rmu_sc0026185.1_g000001
rosa_roxburghii	Rroxscaffold_165G00437000 Rroxscaffold_6G00425360
rosa_rugosa	Rorug02G0653500
rosa_samantha	Rh3AG056800 Rh3BG058200 Rh3CG057400 Rh3DG058700
rosa_wichuraiana	Rw3G004370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	302
AatII	GACGTC	1 cut(s)	582
AccB1I	GGYRCC	1 cut(s)	535
AccBSI	CCGCTC	2 cut(s)	10, 787
AccI	GTMKAC	2 cut(s)	195, 603
AccII	CGCG	6 cut(s)	240, 273, 288, 608, 736, 889
AccIII	TCCGGA	1 cut(s)	91
AclWI	GGATC	4 cut(s)	258, 418, 565, 709
AcoI	YGGCCR	3 cut(s)	138, 259, 1071
AcsI	RAATTY	1 cut(s)	395
AcvI	CACGTG	3 cut(s)	442, 489, 698
AcyI	GRCGYC	3 cut(s)	297, 579, 597
AdeI	CACNNNGTG	2 cut(s)	489, 760
AfaI	GTAC	4 cut(s)	110, 116, 156, 694
AfiI	CCNNNNNNNGG	6 cut(s)	70, 136, 501, 878, 879, 905
AflIII	ACRYGT	4 cut(s)	441, 465, 488, 695
AgeI	ACCGGT	4 cut(s)	70, 805, 846, 981
AgsI	TTSAA	3 cut(s)	664, 812, 994
AjiI	CACGTC	1 cut(s)	466
AjnI	CCWGG	1 cut(s)	627
AluBI	AGCT	5 cut(s)	370, 587, 841, 858, 939
AluI	AGCT	5 cut(s)	370, 587, 841, 858, 939
Alw21I	GWGCWC	1 cut(s)	372
Alw26I	GTCTC	2 cut(s)	296, 1058
AlwI	GGATC	4 cut(s)	258, 418, 565, 709
Ama87I	CYCGRG	3 cut(s)	371, 873, 950
Aor13HI	TCCGGA	1 cut(s)	91
AoxI	GGCC	6 cut(s)	138, 259, 504, 896, 1071, 1106
ApaI	GGGCCC	1 cut(s)	900
ApeKI	GCWGC	5 cut(s)	207, 278, 415, 520, 718
ApoI	RAATTY	1 cut(s)	395
AseI	ATTAAT	1 cut(s)	924
AsiGI	ACCGGT	4 cut(s)	70, 805, 846, 981
AspLEI	GCGC	4 cut(s)	23, 242, 278, 380
AspS9I	GGNCC	9 cut(s)	37, 99, 504, 763, 849, 896, 897, 961, 979
AsuC2I	CCSGG	2 cut(s)	503, 771
AsuHPI	GGTGA	3 cut(s)	60, 784, 1073
AsuNHI	GCTAGC	1 cut(s)	637
AvaI	CYCGRG	3 cut(s)	371, 873, 950
AvaII	GGWCC	6 cut(s)	37, 99, 763, 849, 961, 979
AxyI	CCTNAGG	1 cut(s)	654
BaeGI	GKGCMC	1 cut(s)	900
BalI	TGGCCA	1 cut(s)	140
BanI	GGYRCC	1 cut(s)	535
BanII	GRGCYC	3 cut(s)	82, 372, 900
BbrPI	CACGTG	3 cut(s)	442, 489, 698
BbsI	GAAGAC	1 cut(s)	783
Bbv12I	GWGCWC	1 cut(s)	372
BbvI	GCAGC	5 cut(s)	194, 290, 402, 532, 705
BccI	CCATC	2 cut(s)	149, 242
BceAI	ACGGC	7 cut(s)	118, 137, 287, 365, 584, 659, 940
BcgI	CGANNNNNNTGC	2 cut(s)	700, 734
BciT130I	CCWGG	1 cut(s)	629
BcnI	CCSGG	2 cut(s)	503, 771
BcoDI	GTCTC	2 cut(s)	296, 1058
BfaI	CTAG	3 cut(s)	638, 855, 1089
BfmI	CTRYAG	1 cut(s)	940
Bme1390I	CCNGG	3 cut(s)	503, 629, 771
Bme18I	GGWCC	6 cut(s)	37, 99, 763, 849, 961, 979
BmeT110I	CYCGRG	3 cut(s)	371, 873, 950
BmgBI	CACGTC	1 cut(s)	466
BmgT120I	GGNCC	9 cut(s)	37, 99, 504, 763, 849, 896, 897, 961, 979
BmiI	GGNNCC	8 cut(s)	6, 79, 100, 250, 537, 689, 898, 899
BmrFI	CCNGG	3 cut(s)	503, 629, 771
BmrI	ACTGGG	1 cut(s)	81
BmsI	GCATC	2 cut(s)	290, 468
BmtI	GCTAGC	1 cut(s)	641
BmuI	ACTGGG	1 cut(s)	81
BpiI	GAAGAC	1 cut(s)	783
BpuEI	CTTGAG	1 cut(s)	817
BpuMI	CCSGG	2 cut(s)	503, 771
BsaAI	YACGTR	3 cut(s)	442, 489, 698
BsaBI	GATNNNNATC	1 cut(s)	706
BsaHI	GRCGYC	3 cut(s)	297, 579, 597
BsaI	GGTCTC	1 cut(s)	296
BsaJI	CCNNGG	1 cut(s)	628
BsaWI	WCCGGW	8 cut(s)	70, 91, 749, 805, 834, 846, 981, 1111
BsaXI	ACNNNNNCTCC	2 cut(s)	359, 389
Bsc4I	CCNNNNNNNGG	6 cut(s)	70, 136, 501, 878, 879, 905
Bse118I	RCCGGY	9 cut(s)	70, 242, 257, 805, 846, 905, 963, 981, 1069
Bse1I	ACTGG	2 cut(s)	87, 112
Bse21I	CCTNAGG	1 cut(s)	654
Bse8I	GATNNNNATC	1 cut(s)	706
BseAI	TCCGGA	1 cut(s)	91
BseBI	CCWGG	1 cut(s)	629
BseDI	CCNNGG	1 cut(s)	628
BseGI	GGATG	2 cut(s)	234, 1026
BseJI	GATNNNNATC	1 cut(s)	706
BseLI	CCNNNNNNNGG	6 cut(s)	70, 136, 501, 878, 879, 905
BseMII	CTCAG	3 cut(s)	540, 645, 774
BseNI	ACTGG	2 cut(s)	87, 112
BseRI	GAGGAG	4 cut(s)	44, 380, 584, 949
BseSI	GKGCMC	1 cut(s)	900
BseX3I	CGGCCG	1 cut(s)	259
BseXI	GCAGC	5 cut(s)	194, 290, 402, 532, 705
BseYI	CCCAGC	1 cut(s)	81
Bsh1236I	CGCG	6 cut(s)	240, 273, 288, 608, 736, 889
Bsh1285I	CGRYCG	2 cut(s)	262, 750
BshFI	GGCC	6 cut(s)	140, 261, 506, 898, 1073, 1108
BshNI	GGYRCC	1 cut(s)	535
BshTI	ACCGGT	4 cut(s)	70, 805, 846, 981
BsiEI	CGRYCG	2 cut(s)	262, 750
BsiHKAI	GWGCWC	1 cut(s)	372
BsiHKCI	CYCGRG	3 cut(s)	371, 873, 950
BslFI	GGGAC	1 cut(s)	477
BslI	CCNNNNNNNGG	6 cut(s)	70, 136, 501, 878, 879, 905
BsmAI	GTCTC	2 cut(s)	296, 1058
BsmFI	GGGAC	1 cut(s)	477
BsmI	GAATGC	1 cut(s)	639
BsnI	GGCC	6 cut(s)	140, 261, 506, 898, 1073, 1108
Bso31I	GGTCTC	1 cut(s)	296
BsoBI	CYCGRG	3 cut(s)	371, 873, 950
Bsp120I	GGGCCC	1 cut(s)	896
Bsp1286I	GDGCHC	3 cut(s)	82, 372, 900
Bsp13I	TCCGGA	1 cut(s)	91
Bsp143I	GATC	8 cut(s)	159, 263, 339, 423, 557, 701, 707, 974
BspANI	GGCC	6 cut(s)	140, 261, 506, 898, 1073, 1108
BspCNI	CTCAG	3 cut(s)	541, 646, 775
BspEI	TCCGGA	1 cut(s)	91
BspFNI	CGCG	6 cut(s)	240, 273, 288, 608, 736, 889
BspLI	GGNNCC	8 cut(s)	6, 79, 100, 250, 537, 689, 898, 899
BspOI	GCTAGC	1 cut(s)	641
BspPI	GGATC	4 cut(s)	258, 418, 565, 709
BspT107I	GGYRCC	1 cut(s)	535
BspTNI	GGTCTC	1 cut(s)	296
BsrBI	CCGCTC	2 cut(s)	10, 787
BsrFI	RCCGGY	9 cut(s)	70, 242, 257, 805, 846, 905, 963, 981, 1069
BsrI	ACTGG	2 cut(s)	87, 112
BssAI	RCCGGY	9 cut(s)	70, 242, 257, 805, 846, 905, 963, 981, 1069
BssECI	CCNNGG	1 cut(s)	628
BssMI	GATC	8 cut(s)	159, 263, 339, 423, 557, 701, 707, 974
BssNI	GRCGYC	3 cut(s)	297, 579, 597
Bst2UI	CCWGG	1 cut(s)	629
Bst4CI	ACNGT	2 cut(s)	692, 1061
Bst6I	CTCTTC	3 cut(s)	53, 62, 176
BstACI	GRCGYC	3 cut(s)	297, 579, 597
BstBAI	YACGTR	3 cut(s)	442, 489, 698
BstC8I	GCNNGC	4 cut(s)	131, 244, 639, 716
BstDEI	CTNAG	3 cut(s)	549, 654, 783
BstEII	GGTNACC	1 cut(s)	801
BstF5I	GGATG	2 cut(s)	234, 1026
BstFNI	CGCG	6 cut(s)	240, 273, 288, 608, 736, 889
BstHHI	GCGC	4 cut(s)	23, 242, 278, 380
BstKTI	GATC	8 cut(s)	162, 266, 342, 426, 560, 704, 710, 977
BstMAI	GTCTC	2 cut(s)	296, 1058
BstMBI	GATC	8 cut(s)	159, 263, 339, 423, 557, 701, 707, 974
BstMCI	CGRYCG	2 cut(s)	262, 750
BstMWI	GCNNNNNNNGC	7 cut(s)	246, 384, 478, 605, 643, 895, 915
BstNI	CCWGG	1 cut(s)	629
BstNSI	RCATGY	1 cut(s)	35
BstPI	GGTNACC	1 cut(s)	801
BstSCI	CCNGG	3 cut(s)	501, 627, 769
BstSFI	CTRYAG	1 cut(s)	940
BstSLI	GKGCMC	1 cut(s)	900
BstUI	CGCG	6 cut(s)	240, 273, 288, 608, 736, 889
BstV1I	GCAGC	5 cut(s)	194, 290, 402, 532, 705
BstV2I	GAAGAC	1 cut(s)	783
BstXI	CCANNNNNNTGG	1 cut(s)	34
BstZI	CGGCCG	1 cut(s)	259
Bsu36I	CCTNAGG	1 cut(s)	654
BsuRI	GGCC	6 cut(s)	140, 261, 506, 898, 1073, 1108
BtgZI	GCGATG	1 cut(s)	133
BtrI	CACGTC	1 cut(s)	466
BtsCI	GGATG	2 cut(s)	234, 1026
BtsIMutI	CAGTG	3 cut(s)	450, 546, 780
Cac8I	GCNNGC	4 cut(s)	131, 244, 639, 716
CfoI	GCGC	4 cut(s)	23, 242, 278, 380
Cfr10I	RCCGGY	9 cut(s)	70, 242, 257, 805, 846, 905, 963, 981, 1069
Cfr13I	GGNCC	9 cut(s)	37, 99, 504, 763, 849, 896, 897, 961, 979
CpoI	CGGWCCG	1 cut(s)	979
CseI	GACGC	5 cut(s)	279, 305, 605, 614, 685
Csp6I	GTAC	4 cut(s)	109, 115, 155, 693
CspAI	ACCGGT	4 cut(s)	70, 805, 846, 981
CspI	CGGWCCG	1 cut(s)	979
CviAII	CATG	2 cut(s)	32, 178
CviQI	GTAC	4 cut(s)	109, 115, 155, 693
DdeI	CTNAG	3 cut(s)	549, 654, 783
DpnI	GATC	8 cut(s)	161, 265, 341, 425, 559, 703, 709, 976
DpnII	GATC	8 cut(s)	159, 263, 339, 423, 557, 701, 707, 974
DraIII	CACNNNGTG	2 cut(s)	489, 760
DrdI	GACNNNNNNGTC	1 cut(s)	302
DseDI	GACNNNNNNGTC	1 cut(s)	302
EaeI	YGGCCR	3 cut(s)	138, 259, 1071
EagI	CGGCCG	1 cut(s)	259
Eam1104I	CTCTTC	3 cut(s)	53, 62, 176
EarI	CTCTTC	3 cut(s)	53, 62, 176
EciI	GGCGGA	1 cut(s)	191
Ecl136II	GAGCTC	1 cut(s)	370
EclXI	CGGCCG	1 cut(s)	259
Eco24I	GRGCYC	3 cut(s)	82, 372, 900
Eco31I	GGTCTC	1 cut(s)	296
Eco47I	GGWCC	6 cut(s)	37, 99, 763, 849, 961, 979
Eco52I	CGGCCG	1 cut(s)	259
Eco53kI	GAGCTC	1 cut(s)	370
Eco72I	CACGTG	3 cut(s)	442, 489, 698
Eco81I	CCTNAGG	1 cut(s)	654
Eco88I	CYCGRG	3 cut(s)	371, 873, 950
Eco91I	GGTNACC	1 cut(s)	801
EcoICRI	GAGCTC	1 cut(s)	370
EcoO109I	RGGNCCY	1 cut(s)	897
EcoO65I	GGTNACC	1 cut(s)	801
EcoRI	GAATTC	1 cut(s)	395
EcoRII	CCWGG	1 cut(s)	627
EcoT38I	GRGCYC	3 cut(s)	82, 372, 900
FaeI	CATG	2 cut(s)	35, 181
FaiI	YATR	4 cut(s)	33, 179, 668, 830
FaqI	GGGAC	1 cut(s)	477
FatI	CATG	2 cut(s)	31, 177
FauI	CCCGC	1 cut(s)	138
FblI	GTMKAC	2 cut(s)	195, 603
FokI	GGATG	2 cut(s)	221, 1033
FriOI	GRGCYC	3 cut(s)	82, 372, 900
FspBI	CTAG	3 cut(s)	638, 855, 1089
GlaI	GCGC	4 cut(s)	22, 241, 277, 379
GsaI	CCCAGC	1 cut(s)	85
HaeIII	GGCC	6 cut(s)	140, 261, 506, 898, 1073, 1108
HgaI	GACGC	5 cut(s)	279, 305, 605, 614, 685
HhaI	GCGC	4 cut(s)	23, 242, 278, 380
Hin1I	GRCGYC	3 cut(s)	297, 579, 597
Hin1II	CATG	2 cut(s)	35, 181
Hin6I	GCGC	4 cut(s)	21, 240, 276, 378
HinP1I	GCGC	4 cut(s)	21, 240, 276, 378
HinfI	GANTC	1 cut(s)	530
HphI	GGTGA	3 cut(s)	60, 784, 1073
Hpy166II	GTNNAC	5 cut(s)	196, 604, 695, 792, 852
Hpy188I	TCNGA	5 cut(s)	103, 214, 562, 687, 979
Hpy188III	TCNNGA	5 cut(s)	92, 267, 293, 705, 817
Hpy8I	GTNNAC	5 cut(s)	196, 604, 695, 792, 852
Hpy99I	CGWCG	7 cut(s)	299, 410, 467, 581, 584, 599, 1039
HpyAV	CCTTC	3 cut(s)	325, 872, 939
HpyCH4III	ACNGT	2 cut(s)	692, 1061
HpyCH4IV	ACGT	6 cut(s)	198, 441, 465, 488, 579, 697
HpyCH4V	TGCA	1 cut(s)	459
HpyF10VI	GCNNNNNNNGC	7 cut(s)	246, 384, 478, 605, 643, 895, 915
HpyF3I	CTNAG	3 cut(s)	549, 654, 783
HpySE526I	ACGT	6 cut(s)	198, 441, 465, 488, 579, 697
Hsp92I	GRCGYC	3 cut(s)	297, 579, 597
Hsp92II	CATG	2 cut(s)	35, 181
HspAI	GCGC	4 cut(s)	21, 240, 276, 378
Kpn2I	TCCGGA	1 cut(s)	91
KroI	GCCGGC	1 cut(s)	242
KroNI	GCCGGC	1 cut(s)	244
Kzo9I	GATC	8 cut(s)	159, 263, 339, 423, 557, 701, 707, 974
LmnI	GCTCC	8 cut(s)	10, 77, 215, 254, 367, 562, 936, 1092
Lsp1109I	GCAGC	5 cut(s)	194, 290, 402, 532, 705
LweI	GCATC	2 cut(s)	290, 468
MaeI	CTAG	3 cut(s)	638, 855, 1089
MaeII	ACGT	6 cut(s)	198, 441, 465, 488, 579, 697
MaeIII	GTNAC	2 cut(s)	738, 801
MalI	GATC	8 cut(s)	161, 265, 341, 425, 559, 703, 709, 976
MbiI	CCGCTC	2 cut(s)	10, 787
MboI	GATC	8 cut(s)	159, 263, 339, 423, 557, 701, 707, 974
MboII	GAAGA	6 cut(s)	40, 49, 52, 163, 178, 788
MfeI	CAATTG	1 cut(s)	1053
MhlI	GDGCHC	3 cut(s)	82, 372, 900
MlsI	TGGCCA	1 cut(s)	140
MluCI	AATT	3 cut(s)	395, 968, 1053
MluNI	TGGCCA	1 cut(s)	140
MlyI	GAGTC	1 cut(s)	524
MmeI	TCCRAC	5 cut(s)	55, 126, 237, 790, 939
Mox20I	TGGCCA	1 cut(s)	140
MreI	CGCCGGCG	1 cut(s)	242
MroI	TCCGGA	1 cut(s)	91
MroNI	GCCGGC	1 cut(s)	242
MscI	TGGCCA	1 cut(s)	140
MseI	TTAA	5 cut(s)	351, 389, 681, 924, 1117
MslI	CAYNNNNRTG	2 cut(s)	464, 1019
Msp20I	TGGCCA	1 cut(s)	140
MspA1I	CMGCKG	2 cut(s)	121, 207
MspR9I	CCNGG	3 cut(s)	503, 629, 771
MunI	CAATTG	1 cut(s)	1053
Mva1269I	GAATGC	1 cut(s)	639
MvaI	CCWGG	1 cut(s)	629
MvnI	CGCG	6 cut(s)	240, 273, 288, 608, 736, 889
MwoI	GCNNNNNNNGC	7 cut(s)	246, 384, 478, 605, 643, 895, 915
NaeI	GCCGGC	1 cut(s)	244
NciI	CCSGG	2 cut(s)	503, 771
NdeII	GATC	8 cut(s)	159, 263, 339, 423, 557, 701, 707, 974
NgoMIV	GCCGGC	1 cut(s)	242
NheI	GCTAGC	1 cut(s)	637
NlaIII	CATG	2 cut(s)	35, 181
NlaIV	GGNNCC	8 cut(s)	6, 79, 100, 250, 537, 689, 898, 899
NmeAIII	GCCGAG	3 cut(s)	361, 512, 1084
NmuCI	GTSAC	1 cut(s)	738
NspI	RCATGY	1 cut(s)	35
PaeR7I	CTCGAG	2 cut(s)	371, 950
PcsI	WCGNNNNNNNCGW	4 cut(s)	300, 378, 405, 485
PctI	GAATGC	1 cut(s)	639
PdiI	GCCGGC	1 cut(s)	244
PinAI	ACCGGT	4 cut(s)	70, 805, 846, 981
PleI	GAGTC	1 cut(s)	524
PmaCI	CACGTG	3 cut(s)	442, 489, 698
PmlI	CACGTG	3 cut(s)	442, 489, 698
PpsI	GAGTC	1 cut(s)	524
Ppu21I	YACGTR	3 cut(s)	442, 489, 698
PshBI	ATTAAT	1 cut(s)	924
Psp124BI	GAGCTC	1 cut(s)	372
Psp6I	CCWGG	1 cut(s)	627
PspCI	CACGTG	3 cut(s)	442, 489, 698
PspEI	GGTNACC	1 cut(s)	801
PspFI	CCCAGC	1 cut(s)	81
PspGI	CCWGG	1 cut(s)	627
PspN4I	GGNNCC	8 cut(s)	6, 79, 100, 250, 537, 689, 898, 899
PspOMI	GGGCCC	1 cut(s)	896
PspPI	GGNCC	9 cut(s)	37, 99, 504, 763, 849, 896, 897, 961, 979
PspXI	VCTCGAGB	2 cut(s)	371, 950
PsrI	GAACNNNNNNTAC	2 cut(s)	107, 139
RsaI	GTAC	4 cut(s)	110, 116, 156, 694
RsaNI	GTAC	4 cut(s)	109, 115, 155, 693
RseI	CAYNNNNRTG	2 cut(s)	464, 1019
Rsr2I	CGGWCCG	1 cut(s)	979
RsrII	CGGWCCG	1 cut(s)	979
SacI	GAGCTC	1 cut(s)	372
SaqAI	TTAA	5 cut(s)	351, 389, 681, 924, 1117
Sau3AI	GATC	8 cut(s)	159, 263, 339, 423, 557, 701, 707, 974
Sau96I	GGNCC	9 cut(s)	37, 99, 504, 763, 849, 896, 897, 961, 979
SchI	GAGTC	1 cut(s)	524
ScrFI	CCNGG	3 cut(s)	503, 629, 771
SduI	GDGCHC	3 cut(s)	82, 372, 900
SfaNI	GCATC	2 cut(s)	290, 468
SfcI	CTRYAG	1 cut(s)	940
Sfr274I	CTCGAG	2 cut(s)	371, 950
SgrAI	CRCCGGYG	1 cut(s)	242
SinI	GGWCC	6 cut(s)	37, 99, 763, 849, 961, 979
SlaI	CTCGAG	2 cut(s)	371, 950
SmiMI	CAYNNNNRTG	2 cut(s)	464, 1019
SmlI	CTYRAG	3 cut(s)	371, 796, 950
SmoI	CTYRAG	3 cut(s)	371, 796, 950
Sse9I	AATT	3 cut(s)	395, 968, 1053
SspMI	CTAG	3 cut(s)	638, 855, 1089
SstI	GAGCTC	1 cut(s)	372
StyD4I	CCNGG	3 cut(s)	501, 627, 769
TaaI	ACNGT	2 cut(s)	692, 1061
TaiI	ACGT	6 cut(s)	201, 444, 468, 491, 582, 700
TaqII	GACCGA	1 cut(s)	181
TasI	AATT	3 cut(s)	395, 968, 1053
TauI	GCSGC	8 cut(s)	26, 167, 207, 249, 276, 302, 892, 1052
Tru1I	TTAA	5 cut(s)	351, 389, 681, 924, 1117
Tru9I	TTAA	5 cut(s)	351, 389, 681, 924, 1117
TscAI	CASTG	3 cut(s)	457, 553, 787
TseFI	GTSAC	1 cut(s)	738
TseI	GCWGC	5 cut(s)	207, 278, 415, 520, 718
Tsp45I	GTSAC	1 cut(s)	738
TspDTI	ATGAA	1 cut(s)	845
TspRI	CASTG	3 cut(s)	457, 553, 787
VpaK11BI	GGWCC	6 cut(s)	37, 99, 763, 849, 961, 979
VspI	ATTAAT	1 cut(s)	924
XapI	RAATTY	1 cut(s)	395
XceI	RCATGY	1 cut(s)	35
XcmI	CCANNNNNNNNNTGG	1 cut(s)	859
XhoI	CTCGAG	2 cut(s)	371, 950
XmiI	GTMKAC	2 cut(s)	195, 603
XspI	CTAG	3 cut(s)	638, 855, 1089
ZraI	GACGTC	1 cut(s)	580

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.